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Fusion gene:TMEM230_LMTK2 (FusionGDB2 ID:HG29058TG22853) |
Fusion Gene Summary for TMEM230_LMTK2 |
Fusion gene summary |
| Fusion gene information | Fusion gene name: TMEM230_LMTK2 | Fusion gene ID: hg29058tg22853 | Hgene | Tgene | Gene symbol | TMEM230 | LMTK2 | Gene ID | 29058 | 22853 |
| Gene name | transmembrane protein 230 | lemur tyrosine kinase 2 | |
| Synonyms | C20orf30|HSPC274|dJ1116H23.2.1 | AATYK2|BREK|KPI-2|KPI2|LMR2|PPP1R100|cprk|hBREK | |
| Cytomap | 20p13-p12.3 | 7q21.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | transmembrane protein 230UPF0414 transmembrane protein C20orf30 | serine/threonine-protein kinase LMTK2CDK5/p35-regulated kinaseapoptosis-associated tyrosine kinase 2brain-enriched kinasecyclin-dependent kinase 5/p35-regulated kinasekinase/phosphatase/inhibitor 2protein phosphatase 1, regulatory subunit 100serine | |
| Modification date | 20240305 | 20240411 | |
| UniProtAcc | . | . | |
| Ensembl transtripts involved in fusion gene | ENST00000202834, ENST00000342308, ENST00000379277, ENST00000379279, ENST00000379283, ENST00000379286, ENST00000492419, | ||
| Fusion gene scores | * DoF score | * DoF score (Degree of Frequency) = # partners X # break points X # disease types 5 X 4 X 4=80 | * DoF score (Degree of Frequency) = # partners X # break points X # disease types 2 X 9 X 5=90 |
| # samples | 7 | 10 | |
| ** MAII score | ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) log2(7/80*10)=-0.192645077942396 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) log2(10/90*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: TMEM230 [Title/Abstract] AND LMTK2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | TMEM230(5086833)-LMTK2(97820039), # samples:1 | ||
Fusion gene breakpoints across TMEM230 (5'-gene)* Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion gene breakpoints across LMTK2 (3'-gene)* Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Breakpoints for TMEM230_LMTK2 |
RNA-seq based exon junction arranged fusion gene breakpoints from 8 resources (TCGA, CCLE, cBioPortal, GenBank, ChimerDB, ChimerKB, ChildHoodFusions, and GTEx). For the expressed sample information, go to Fusion Gene Sample section. |
| Hgene | Hchr | Hbp | Tgene | Tchr | Tbp |
| TMEM230 | chr20 | 5086833 | LMTK2 | chr7 | 97820039 |
| TMEM230 | chr20 | 5086833 | LMTK2 | chr7 | 5086833 |
DNA-seq based exon junction arranged fusion gene breakpoints from dbVar. For the expressed sample information, go to Fusion Gene Sample section. |
| Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | SV type |
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Tumorigenic MoA (Mechanism of Action) Scenarios of Fusion Genes for TMEM230_LMTK2 |
To generate these tumorigenic scenario annotations, we implemented a deduction-first, retrieval-later computational framework. The pipeline first applies rule-guided reasoning across ten core mechanistic categories (M1–M10) derived from fusion gene biology to infer candidate mechanisms, tumorigenic scenarios, targeting points, and targeting backgrounds. To ensure empirical accountability, a governed Python workflow retrieves literature candidates via NCBI E-utilities and Europe PMC using tiered searches. Using JSON Schema-constrained LLM evidence judges (GPT-5.6 Luna and Terra), retrieved articles are evaluated for specificity and confidence without de novo PMID generation. This produces two distinct versions: a strict version restricted to high- or medium-confidence fusion-specific evidence, and an extended version incorporating broader gene-, pathway-, and contextual evidence. |
| Constitutively Active Kinases, Catalytic Domain Dysregulation, & Transmembrane Ligand Fusions | Aberrant Chimeric Transcription Factor / Fusion Transcription Factor Activity | Epigenetic Reprogramming / Histone Modifier Dysregulation | Chromatin Remodeling Dysregulation | Condensate-Driven Transcriptional Rewiring / LLP | Promoter / Enhancer Hijacking | Dominant-Negative Antagonism | Cell Cycle / Checkpoint Bypass / RNA Processing Dysregulation | Subcellular Mislocalization / Spatial Dysregulation | Nuclear Body / Sub-organellar Architecture Disruption & Differentiation Blockade | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
| Fusion Gene Name | Mechanism Category | Mechanism PubMed | Tumorigenic Scenarios | Tumorigenic Scenario PubMed | Targeting Points | Targeting PubMed | Mechanism Background | Mechanism Background PubMed |
| TMEM230-LMTK2 | ![]() Promoter / Enhancer Hijacking M6 | Promoter swap alters transmembrane protein 230 secretory vesicle expression alongside LMTK2 (lemur tyrosine kinase 2), modifying secretory vesicular trafficking directly with transmembrane kinase survival signaling. | Pan-kinase inhibitors; secretory pathway blockers | Prostate and epithelial carcinomas |
| Fusion Gene Name | Mechanism Category | Mechanism PubMed | Tumorigenic Scenarios | Tumorigenic Scenario PubMed | Targeting Points | Targeting PubMed | Mechanism Background | Mechanism Background PubMed |
| TMEM230-LMTK2 | ![]() Promoter / Enhancer Hijacking | Evidence level: Limited indirect gene evidence; Confidence: Low; PMID: 30761001; Title: Unraveling the Function of Lemur Tyrosine Kinase 2 Network. | Promoter swap alters transmembrane protein 230 secretory vesicle expression alongside LMTK2 (lemur tyrosine kinase 2), modifying secretory vesicular trafficking directly with transmembrane kinase survival signaling. | Evidence level: Limited indirect gene evidence; Confidence: Low; PMID: 30761001; Title: Unraveling the Function of Lemur Tyrosine Kinase 2 Network.; PMID: 28040547; Title: Lemur tyrosine kinase 2 (LMTK2) is a determinant of cell sensitivity to apoptosis by regulating the levels of the BCL2 family members. | Pan-kinase inhibitors; secretory pathway blockers | Prostate and epithelial carcinomas | Evidence level: Limited indirect gene evidence; Confidence: Low; PMID: 28040547; Title: Lemur tyrosine kinase 2 (LMTK2) is a determinant of cell sensitivity to apoptosis by regulating the levels of the BCL2 family members.; PMID: 30980866; Title: Lemur tyrosine kinase 2 acts as a positive regulator of NF-κB activation and colon cancer cell proliferation. |
Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | . |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | LMTK2 | GO:0006468 | protein phosphorylation | 12393858 |
| Tgene | LMTK2 | GO:0018105 | peptidyl-serine phosphorylation | 16887929 |
| Tgene | LMTK2 | GO:0018107 | peptidyl-threonine phosphorylation | 16887929 |
| Tgene | LMTK2 | GO:0046777 | protein autophosphorylation | 12393858 |
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Fusion Genomic Features for TMEM230_LMTK2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence) of In-frame fusion genes. FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| TMEM230 | chr20 | 5086833 | - | LMTK2 | chr7 | 97820039 | + | 1.44e-10 | 1.00e+00 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence) of 5UTR-3CSD fusion genes (N-truncated cases). |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| TMEM230 | chr20 | 5086833 | - | LMTK2 | chr7 | 97820039 | + | 1.44e-10 | 1.00e+00 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence) of 5CDS-3UTR fusion genes (C-truncated cases). |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of six genomic regulatory feature tracks across a ±5 kb window centered on the fusion breakpoints. We input the breakpoint sequences into AlphaGenome and obtained predicted genome tracks at single-base-pair resolution for each modality by running a single forward pass over the reference sequence. Specifically, for each breakpoint, AlphaGenome processed and returned predicted track data across diverse modalities, which were then averaged across all tracks within each output type and visualized across the ±5 kb window. The left panel shows the 5'-gene breakpoint ±5 kb area, and the right panel shows the 3'-gene breakpoint area, with tracks grouped by category: chromatin accessibility (DNase-seq, ATAC-seq), active transcription (RNA-seq, CAGE), and chromatin binding (ChIP-Histone, ChIP-TF). |
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Fusion Gene ORF Annotations for TMEM230_LMTK2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 5UTR-3CDS | ENST00000492419 | ENST00000297293 | TMEM230 | chr20 | 5086833 | - | LMTK2 | chr7 | 97820039 | + |
| Frame-shift | ENST00000202834 | ENST00000297293 | TMEM230 | chr20 | 5086833 | - | LMTK2 | chr7 | 97820039 | + |
| Frame-shift | ENST00000342308 | ENST00000297293 | TMEM230 | chr20 | 5086833 | - | LMTK2 | chr7 | 97820039 | + |
| Frame-shift | ENST00000379277 | ENST00000297293 | TMEM230 | chr20 | 5086833 | - | LMTK2 | chr7 | 97820039 | + |
| Frame-shift | ENST00000379279 | ENST00000297293 | TMEM230 | chr20 | 5086833 | - | LMTK2 | chr7 | 97820039 | + |
| Frame-shift | ENST00000379286 | ENST00000297293 | TMEM230 | chr20 | 5086833 | - | LMTK2 | chr7 | 97820039 | + |
| In-frame | ENST00000379283 | ENST00000297293 | TMEM230 | chr20 | 5086833 | - | LMTK2 | chr7 | 97820039 | + |
ORFfinder Result Based On The Fusion Transcript Sequences of the In-frame Fusion Genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | Seq length (transcript) | Seq length (peptide) |
| ENST00000379283 | ENST00000297293 | TMEM230 | chr20 | 5086833 | LMTK2 | chr7 | 97820039 | 568 | 203 |
ORFfinder Result Based On The Fusion Transcript Sequences of the 5UTR-3CDS Fusion Genes for N-Truncated Protein Search. |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | Seq length (transcript) | Seq length (peptide) |
| ENST00000492419 | ENST00000297293 | TMEM230 | chr20 | 5086833 | LMTK2 | chr7 | 97820039 | 0 | 371 |
ORFfinder Result Based On The Fusion Transcript Sequences of the 5CDS-3UTR Fusion Genes for C-Truncated Protein Search. |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | Seq length (transcript) | Seq length (peptide) |
DeepORF Prediction of The Coding Potential Based on The Fusion Transcript Sequence of In-frame Fusion Genes. DeepORF is a Coding Potential Classifier Based on Convolutional Neural Network by Comparing the Real Ribo-seq Data. If the No-coding Score < 0.5 and Coding Score > 0.5, Then The In-frame Fusion Transcript is Predicted as Being Likely Translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | No-coding score | Coding score |
| ENST00000379283 | ENST00000297293 | TMEM230 | chr20 | 5086833 | LMTK2 | chr7 | 97820039 | 2.13e-05 | 1.00e+00 |
DeepORF Prediction of The Coding Potential Based on The Fusion Transcript Sequence of 5UTR-3CDS Fusion Genes (Potential N-Truncated Proteins). |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | No-coding score | Coding score |
| ENST00000492419 | ENST00000297293 | TMEM230 | chr20 | 5086833 | LMTK2 | chr7 | 97820039 | 0.00e+00 | 1.21e-05 |
DeepORF Prediction of The Coding Potential Based on The Fusion Transcript Sequence of 5CDS-3UTR Fusion Genes (Potential C-Truncated Proteins). |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | No-coding score | Coding score |
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Fusion Protein Retained/Non-Retained Functional Features for TMEM230_LMTK2 |
Protein Level Annotation from FGviewer* Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at download page. Minus value of BPloci means that the break pointn is located before the CDS. |
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| - In-frame and retained protein feature among the 13 regional features (visualization across fusion protein length). |
TMEM230_LMTK2_chr20-5086833_chr7-97820039.png![]() |
| - In-frame and retained protein feature among the 13 regional features (texts). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | TMEM230 | chr20:5086833 | chr7:97820039 | ENST00000379283 | Q96A57 | 3 | 4 | 46_66 | 74.0 | 121.0 | Transmembrane | Helical |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 1088_1100 | 332.6666666666667 | 1504.0 | Compositional bias | Polar residues |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 1277_1296 | 332.6666666666667 | 1504.0 | Compositional bias | Acidic residues |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 1409_1424 | 332.6666666666667 | 1504.0 | Compositional bias | Acidic residues |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 1430_1448 | 332.6666666666667 | 1504.0 | Compositional bias | Polar residues |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 597_606 | 332.6666666666667 | 1504.0 | Compositional bias | Acidic residues |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 804_820 | 332.6666666666667 | 1504.0 | Compositional bias | Polar residues |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 970_984 | 332.6666666666667 | 1504.0 | Compositional bias | Low complexity |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 1013_1202 | 332.6666666666667 | 1504.0 | Region | Disordered |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 1276_1317 | 332.6666666666667 | 1504.0 | Region | Disordered |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 1372_1469 | 332.6666666666667 | 1504.0 | Region | Disordered |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 597_622 | 332.6666666666667 | 1504.0 | Region | Disordered |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 804_840 | 332.6666666666667 | 1504.0 | Region | Disordered |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 875_898 | 332.6666666666667 | 1504.0 | Region | Disordered |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 970_999 | 332.6666666666667 | 1504.0 | Region | Disordered |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | TMEM230 | chr20:5086833 | chr7:97820039 | ENST00000379283 | Q96A57 | 3 | 4 | 79_99 | 74.0 | 121.0 | Transmembrane | Helical |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 137_407 | 332.6666666666667 | 1504.0 | Domain | Protein kinase |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 1_10 | 332.6666666666667 | 1504.0 | Topological domain | Cytoplasmic |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 32_42 | 332.6666666666667 | 1504.0 | Topological domain | Lumenal |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 64_1503 | 332.6666666666667 | 1504.0 | Topological domain | Cytoplasmic |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 11_31 | 332.6666666666667 | 1504.0 | Transmembrane | Helical |
| Tgene | LMTK2 | chr20:5086833 | chr7:97820039 | ENST00000297293 | Q8IWU2 | 8 | 14 | 43_63 | 332.6666666666667 | 1504.0 | Transmembrane | Helical |
- Retained PPIs in in-frame fusion. |
| Partner | Hgene | Hbp | Tgene | Tbp | ENST | UniProt | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
| Partner | Hgene | Hbp | Tgene | Tbp | ENST | UniProt | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Fusion Transcript Sequence for TMEM230_LMTK2 |
In-frame Fusion Transcript Sequences. |
>TMEM230_LMTK2_ENST00000379283_ENST00000297293_5086833_97820039 length=8223nt Breakpoint=568nt TGGCACTTAAGCGGGCCATGCCATGCAACCTTGGGCGCTGCCAACCGTGGGCGAGCTCTGGGTGTGCGGGCGGCCTGGCGCGGCGCTCCGGTAAGGCGTGTGTGCGGCAGGGCGGGGACAGAACCGTCCTCTCGGGCTCTGGGCGTGTCC GAGACCGCGCTCCCCGCCGAAATCAAGCTCCGAGTCATCCGTGTGGGGCATTCGTCCCCCCTGGCACAGTTGGCCTCTTTCCAGAAGCCCGTTTTGTTTGTTTTACGTCTAAATTCGCGTCGGTTCTTATTTCTCTCCCTGGCAAGGTCT GAAGACGGGTAGGAGAATAACGTATGTAGAGCTGTGTCAGCGTGTTATGATGCCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGTAAAGTGAAATATTCAAGGCTCTCCAGCACAGACGATGGCTACATTGACCTTCAGTTTAA GAAAACCCCTCCTAAGATCCCTTATAAGGCCATCGCACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCCTCCTGCTGTCAGGCTACATCAGCAAAGGGGTCTCTGGGTGTGACACTTTGGGAGCTTTTTG ACAATGCCGCACAGCCGTATTCAAACCTTTCCAACTTAGATGTCCTCAACCAAGTCATTAGAGAGAGAGACACAAAACTCCCGAAGCCCCAGCTGGAGCAGCCCTACTCTGATAGATGGTATGAAGTCTTACAGTTCTGTTGGCTGTCAC CAGAAAAGAGACCCGCGGCTGAAGATGTGCACAGGCTGCTGACTTACCTGCGGCTGCAGAGCCAGCGGGACTCAGAGGTCGACTTTGAACAGCAGTGGAACGCTCTGAAGCCGAACACAAACAGCAGAGACTCCTCCAACAATGCTGCAT TCCCAATTCTCGACCACTTTGCCAGGGACCGGCTGGGTCGTGAAATGGAGGAAGTCCTCACCGTGACCGAAACCAGCCAGGGCCTGAGCTTCGAGTATGTCTGGGAGGCCGCTAAGCACGACCACTTTGACGAGCGCAGCCGGGGCCACC TGGACGAAGGCTTGTCCTACACGAGCATCTTCTATCCGGTTGAAGTTTTTGAGAGTTCGCTTTCAGATCCTGGGCCCGGAAAGCAAGATGACAGCGGCCAGGATGTCCCCCTGAGGGTCCCTGGAGTGGTTCCTGTTTTTGATGCCCACA ACCTTTCTGTTGGAAGCGACTATTATATCCAGTTAGAAGAAAAAAGTGGTAGTAACTTGGAGCTTGATTACCCACCAGCGCTGCTCACAACCGACATGGATAATCCAGAAAGGACTGGCCCTGAACTGTCCCAGCTCACGGCGCTCAGGA GCGTTGAACTTGAGGAGTCCAGTACAGATGAGGACTTCTTCCAAAGCAGTACAGACCCCAAAGACTCTAGCTTACCAGGGGACTTACACGTGACCAGTGGCCCCGAGAGCCCTTTCAACAATATATTTAATGATGTGGACAAATCGGAAG ATTTGCCCAGTCACCAAAAAATATTCGACTTAATGGAATTAAACGGAGTTCAAGCCGACTTTAAACCTGCCACTTTAAGTTCCAGTTTGGATAACCCCAAAGAGTCAGTCATAACAGGCCACTTTGAGAAAGAAAAGCCCCGTAAGATTT TTGACAGTGAGCCTCTCTGCCTATCAGATAATCTTATGCACCAAGATAATTTTGATCCATTGAATGTTCAAGAATTGTCAGAAAACTTTTTATTTCTTCAAGAGAAAAACTTACTAAAAGGCTCATTGTCCAGCAAAGAACACATAAATG ATCTTCAGACAGAACTTAAGAATGCTGGTTTTACTGAAGCTATGTTAGAAACGTCATGTAGAAACTCTTTAGATACTGAGCTTCAGTTTGCTGAAAATAAGCCAGGCTTGTCTTTGTTGCAGGAAAACGTAAGCACAAAGGGTGACGATA CAGATGTCATGCTCACAGGTGACACTTTGAGCACCTCATTGCAGTCTTCCCCGGAAGTGCAGGTACCTCCTACCTCCTTCGAAACAGAAGAAACGCCCCGTCGGGTACCCCCAGACTCACTCCCAACACAGGGAGAAACCCAGCCCACGT GTTTAGATGTTATTGTCCCGGAGGACTGTCTCCACCAGGACATCAGTCCAGACGCTGTGACTGTCCCGGTTGAAATTCTCTCAACTGATGCCAGAACCCACAGCCTGGATAACAGGTCCCAGGACTCTCCTGGCGAGAGTGAGGAGACCC TGCGACTCACCGAAAGTGACTCTGTTCTTGCTGATGACATCCTTGCCAGCAGGGTGAGTGTAGGGAGTAGTCTCCCGGAACTGGGACAGGAATTGCACAATAAACCATTTTCGGAAGACCATCACAGTCATCGCCGGCTAGAGAAAAACT TAGAGGCTGTGGAGACTTTAAATCAGCTCAATTCTAAAGACGCAGCAAAAGAAGCAGGCTTGGTGTCTGCCCTCTCCTCGGACTCAACCAGTCAGGACAGCCTCCTGGAGGACAGCTTGTCAGCACCCTTCCCAGCCTCTGAGCCGTCCC TGGAAACCCCGGACTCTCTGGAGTCAGTGGATGTCCACGAAGCGCTACTGGACTCTTTAGGATCTCACACTCCCCAGAAACTAGTGCCCCCCGATAAGCCGGCAGACAGTGGCTACGAAACAGAGAACTTGGAGTCTCCCGAGTGGACCT TGCATCCCGCTCCCGAGGGCACCGCAGACTCAGAACCAGCCACCACGGGCGATGGCGGCCACAGCGGTCTGCCTCCCAACCCGGTCATTGTCATCTCAGATGCCGGCGATGGTCACAGAGGCACAGAAGTGACCCCTGAGACGTTCACAG CTGGCTCCCAGGGTTCATACCGAGACTCTGCGTACTTCTCAGACAATGACTCTGAGCCCGAGAAAAGGTCTGAGGAGGTCCCGGGAACCTCCCCATCCGCCTTGGTGTTGGTACAGGAGCAGCCCCTACCCGAGCCAGTCCTCCCCGAGC AAAGTCCTGCTGCCCAGGATAGCTGCCTGGAAGCCAGAAAGAGCCAGCCAGATGAAAGTTGTCTGTCTGCTTTGCACAACTCCAGTGACCTGGAATTAAGAGCCACGCCGGAGCCAGCACAGACTGGTGTTCCCCAGCAGGTGCATCCCA CGGAAGACGAGGCCAGCAGTCCCTGGAGTGTGCTGAATGCAGAACTTAGCAGCGGCGATGACTTCGAGACACAGGACGATCGCCCCTGCACCCTCGCTTCCACGGGGACCAACACGAACGAACTCCTTGCCTACACCAATTCTGCGCTGG ACAAGTCCCTGTCCAGCCACTCCGAGGGCCCGAAGTTGAAGGAGCCGGACATCGAAGGGAAGTACCTGGGGAAACTCGGGGTGTCAGGGATGCTCGACCTCTCAGAGGACGGGATGGATGCAGACGAGGAGGACGAAAACAGCGACGACT CGGACGAGGACCTGCGGGCCTTCAACCTGCATAGCCTCAGCTCCGAGTCGGAGGACGAGACCGAGCACCCCGTGCCCATCATCCTCAGCAACGAGGACGGAAGGCACCTGCGGAGTCTGTTGAAGCCCACAGCGGCCAATGCCCCCGACC CACTGCCCGAGGACTGGAAGAAGGAAAAGAAGGCAGTCACGTTTTTCGATGATGTCACAGTCTACCTGTTTGACCAGGAGACCCCAACCAAAGAGCTGGGGCCCTGTGGAGGAGAGGCGTGCGGCCCGGACCTGAGCGGCCCAGCCCCAG CCTCAGGCTCTCCCTACCTGAGCAGGTGCATCAACTCCGAAAGCTCCACCGACGAAGAAGGTGGTGGCTTTGAGTGGGATGATGACTTCTCCCCAGATCCTTTTATGTCAAAGACAACAAGTAACCTGCTCAGCTCCAAGCCTTCTCTCC AAACATCCAAGTACTTTTCTCCGCCGCCACCGGCCCGGAGCACGGAGCAGAGCTGGCCGCACTCGGCGCCTTACTCCCGGTTCTCCATCTCTCCCGCCAACATTGCCAGCTTTTCCCTCACACACCTGACCGACTCGGACATCGAGCAGG GCGGAAGCAGCGAAGACGGAGAAAAGGACTAGGTGGCTGCCAACGCGCACGCTCGGGTCCGAGGCTGCTCCCCTGGAGCGGCGCCCCTGCGCCCTCAGCCCGAGCAGCGACATCCACTCGCCATTTGCTGACATGAGATTGGGAGGAAGA ATCCAGAGGTGAAGAGGGAGACGGCTCTTAGCTGCGTTCAAGGCGGGGCCCTCGGGAGCCCAGGTGCAGAGCGAGGCCGTGTCCAGGAGCCGGCGTCCCTCAGTGCCCCGTGCACCCGCGGCCGCGGCCTCCCAGGCAGTGCTCATGCGC TGGCCGTCGGGGGAGGCAGGGGCACAGCCTCCATGTGCGCGCGCGTGTGGAGCTGTGTGCACCGCATGTGTGCTTTCCACAGGGGCGTCTCTGCGTCCACGCCTGCACATCCCGGCGCACGTGTGGGCACCACAGAGGACACGTGAGGGG AATGGTCACCAGTGAGCCATATTTATTATTTCTAGAGAAATCACGAACTGCTTTCTGTAATTGCACTGTGGATAAATGTTCCGAGAGTCTCCATTGTTGTACAGGATCTTCAGTTATTCGAGGGGAATGAGGCAGGTCAAGCCGATGCTA GCCACTAGTTTGATTTTTTTTCTGTTTTATAGTTTGCGCTGCATGGTACTTGTGAAGCTTAAATATTTTGAGTGTTCTACTGTGTCTAGGATTGTTGGGATTGTACATATGGTACTCTTTCATAAATGATAAATGATTCTGAATGTTAGT GTTTTATGTTCATATAGGAAATATTTTCATTGAGTCCAAAATACCACTGTTTTGTTGATGGACTTGAATGCATTTTTGTCTCTTCTTGATGAAGCGGCTTTGCCGCAGCAAATGAGGCTTCTCTCTGAGGAGCTGAGAGGTCTTGCAGCC TCTCCTTGTCATTCTCCCACCCCACATCCCATTTTTTAAAGCCCTTTTGGTAAAAACCAACAGGTTGTGGCCGCAGACCTCAGATGGACCCGGCCCATCCCTGGGGACGTGCTGGCGTGGCAGGTCCAGAGAGCTGCACCCTGCACGGGG CACCGCACCGCTTCCCTCCGCGCAGCTCTTCTGCCTGGTTTTCGGAGGCCAGGCTGCTGGGAAGCTTCCGTGTTCCTGTCAGTCCTTCCTTCAAGAAGCCGGGGAACTCAGGCAGACTCATCTCCGCAGAGCATACCAGCCGTGGGGGAC CGTTCGACTTGATGATGTGTGCACACTTCAGGTGGTGGGGACTTGAGCTTTAAAAAAACCTCCACAGCCGAATCTTCTCCTCCGAGCCACTCCACGTCACGTCCAGCTGGGCCTGGCCAGTCTGTGGTTATCCATGTGGGATGAGATAAC ACCACATCCTGCAGCTGTGAAGGGGGATGGACAAGGGACGACGGCCGACGGCAGAGCATCAGCAGCCGACACATAGTTCGGGTCGGGGCCTTGGGTGGTCCTGCATGGCCCGGGACTCATCTCACGGACCCTCCGTTCTGCATTAAGCCC CAGGTTCTCTTCTGGCTTTGAAAGGGCCCGAGTGCTCCCAGTGTAGCTTCGTCACATCGTCACGAGCCCCTGTGGTCATGGGCGACCTCACACCTCCCTCCCTGAGTTCTGCTCTGACATAAGGAAGTCCTCGGTGGCTGGTGCAGCGCG GCTGTGCTGTGCTGGGGAGGCAGCCGTTCCTTCGGGGGTCCTTGGGCCTGCAGTCCCCTCATACTCACCCTTCACCCAACATATTTTCCGGTGCTGATATGTTTCCAGACTCCAGCGCAACCTGGGGTGCTCTCCAGACCCGTGCAGGGG CCGCCTGGGGTACACGGAAGGAAGTTGAGTCCTAGTGCAAAATGCAGGCGGACGTTGCCAGAGAGTGCGCAGCAAATGACCTTCATTGCCAGTTCCACCCTACTCCTCTCATTTTTTATACTAAGCAATAACTTTCCAAAGCAAGAAGTT CAGGATGGAGAGAGTCCCCTCCTGTGTAGGCATGGGGTGGATGCGGTGCCCACCTGGGCTATGTGGGGAGCACCACTGTCTCGGGATGCGCGAATTTTTTTTTTTTTTTTAATTAACAGGGCATTAGAAGATGATTTTGCCAAAATTGTC ATGACTCTGAATTCTTGCTGTGGGGACTTCCTGAGTTTTCTCAGTTTTTACATCTAAGATTAGTCTTGGCTGAAGAGAAATGAGACGTGATTATACTACTTTTTCAATTGCAGGTTTAAGGAGTTCAGATTTAATGACCAAAGTCATACA GATCATGGAATCTGTCGTCGTCTTATACAGTGTCAGCCTCGAGTACATTTATTAACCTTTTGGGGCTGTCAGTTTTCCACTAGGATTAAGATTTTGGCCGGGCGCGGTGGCTCACGCCTGCAATCCCAACACATTGGGGGGTCGAGGCGG ACGGATCACTTTGAGCCCAGGAGTTCAAGACCAGCCTGGGCAACATGGCGAAACCTCGTCTCTACTAAAAATACAAAATATATATATATATATATATACTAGCTGGGGCACATAGTGGTGTGCACCTGTAGTCCCAGCTGCTTGGGAGGC TGAGGTGGGAGGATGGCTAGAGCCCAGGAGATGGGTGTTGCAGTGAGCTGAGACCATGCCACTGTACTCTAGCCTGGGTAACAGCCAGACCCTGTCTCAAAAAAAAAAACAATTTTTTTCATAACATAATTCCCATTTTTATTTATTTTG AGTCACTCATAATTAATTGCCAAAAAAGCATTTTATACATTGAGTTGGGGGGTAGTGGATCTTAGTGTGGTGTTGCATGGAGGGGCGAGATTTTATATTTATAATCAACACGTGGGTTAACATGTTTTTTTGAAATCCAAGCAATACACA GGAAATTTAAGTAGAATAAAAATTGCAGCCCATTTTTGAAATGTCAGCATGTGCTGTGTTCAGTTCAGGTTTTTGTTGTTTGTTTTGTTATTTTTTAACTAATAAGTTGGTTATCAGTGGTGGGTTTTCAAAATGTACTTGTTCTAATAA GTTGTACAATGAACTAAATCAGTGGCATTCTCTAGATAATGTGGGGGAAGGTTAGAATATTTTCTGGCCTTCTATGGGGTAGCAACCCAGAATCAATCTGAATTAGTCCTGTTTTGGTGGAGTTTGTACATTTTAAATCCTATAACAAAA ATAATCTAGTTTTCATTTCCTTACTAGCTAGATGCGAATTTGTCTTTTTGAATGACCCTGTCAATAAGCCAGAAAGGGCAACCCAGAAAAAGTGCTCCCCACATCCTTCTGAGACTTGGCCTGTGTGTGTGGACGAGAAGCCATTCACCG TAAGGGTGCAGAAAGCTCGACCAAGCCGAATTGCAAACAACGTTCGTTCTATTTTTAAATGTACAGGTTCGATCGTTTCTATAGAAATGGGTTTATCTAAGAAAAGTCTTGGTTTGTCTTGCTGCTGTAAAAGGCCTTTCCAAACCCCTC CTTTTATTCCTGTTTCCCGAAATAAGGTATTTGTAGAGTTAAGGACCTACTGCATGCCTGTCCCCAGGGCCCCGGTGGAAGGAAGGCAGCGCCTGCTCTTCCTTAACTCAGCCCATCATCTGAAAATTCAGAAGTGAACCAAGGGTTAGA CGCCAGAGGTTGGGCTTCTGTTAGAGTGGCTTCAAAACATGAGCCTTATGGGAAGTAGCCTTAAAAAAAGAATGGGTATACGCAGTGACTTCCGATGGAAATCTCCAAAACAATATTCCTAAGTAGCAATGGGGTTGGCTCAAGTCTTTA TTAACAAAGAACATTCTCTTTCATCTATAAAGAAATTCTTAAAGATGCATTGACAGTGTTGAATTACCAACAGCCTGTGAAGATCAGTTTGACCGGTGTGGACACGTGCTGGTTAAGCACTCAGGCCTACGTGGGCCGAGCGGGATCTTG ATCATGGGGCTGGTGTATGGATCCACCGTCGGATTCCGTCTGCAGAGGAGGACGTAGGGGGCCGTCACACCCACCAGGCCTCCCTGCTGTGCTTTAACACAGGCAGAAGAGGTTCATGGCAATATAATAGTCAATGAACTTTCAGTTTAA ATTGTGTACATTTTTAAATTGTAAGATTTTTACTGTATATTGATGCATAGTGTGATTCAATAAATTGCTTGTAATTTAAAAACTATTTAATATTCAAAATAAATATAGTTATATATTTATAAA |
N-Truncated Transcript (5UTR-3CDS) Sequences |
>TMEM230_LMTK2_ENST00000492419_ENST00000297293_5086833_97820039 length=7655nt Breakpoint=0nt GTCTCTGGGTGTGACACTTTGGGAGCTTTTTGACAATGCCGCACAGCCGTATTCAAACCTTTCCAACTTAGATGTCCTCAACCAAGTCATTAGAGAGAGAGACACAAAACTCCCGAAGCCCCAGCTGGAGCAGCCCTACTCTGATAGATG GTATGAAGTCTTACAGTTCTGTTGGCTGTCACCAGAAAAGAGACCCGCGGCTGAAGATGTGCACAGGCTGCTGACTTACCTGCGGCTGCAGAGCCAGCGGGACTCAGAGGTCGACTTTGAACAGCAGTGGAACGCTCTGAAGCCGAACAC AAACAGCAGAGACTCCTCCAACAATGCTGCATTCCCAATTCTCGACCACTTTGCCAGGGACCGGCTGGGTCGTGAAATGGAGGAAGTCCTCACCGTGACCGAAACCAGCCAGGGCCTGAGCTTCGAGTATGTCTGGGAGGCCGCTAAGCA CGACCACTTTGACGAGCGCAGCCGGGGCCACCTGGACGAAGGCTTGTCCTACACGAGCATCTTCTATCCGGTTGAAGTTTTTGAGAGTTCGCTTTCAGATCCTGGGCCCGGAAAGCAAGATGACAGCGGCCAGGATGTCCCCCTGAGGGT CCCTGGAGTGGTTCCTGTTTTTGATGCCCACAACCTTTCTGTTGGAAGCGACTATTATATCCAGTTAGAAGAAAAAAGTGGTAGTAACTTGGAGCTTGATTACCCACCAGCGCTGCTCACAACCGACATGGATAATCCAGAAAGGACTGG CCCTGAACTGTCCCAGCTCACGGCGCTCAGGAGCGTTGAACTTGAGGAGTCCAGTACAGATGAGGACTTCTTCCAAAGCAGTACAGACCCCAAAGACTCTAGCTTACCAGGGGACTTACACGTGACCAGTGGCCCCGAGAGCCCTTTCAA CAATATATTTAATGATGTGGACAAATCGGAAGATTTGCCCAGTCACCAAAAAATATTCGACTTAATGGAATTAAACGGAGTTCAAGCCGACTTTAAACCTGCCACTTTAAGTTCCAGTTTGGATAACCCCAAAGAGTCAGTCATAACAGG CCACTTTGAGAAAGAAAAGCCCCGTAAGATTTTTGACAGTGAGCCTCTCTGCCTATCAGATAATCTTATGCACCAAGATAATTTTGATCCATTGAATGTTCAAGAATTGTCAGAAAACTTTTTATTTCTTCAAGAGAAAAACTTACTAAA AGGCTCATTGTCCAGCAAAGAACACATAAATGATCTTCAGACAGAACTTAAGAATGCTGGTTTTACTGAAGCTATGTTAGAAACGTCATGTAGAAACTCTTTAGATACTGAGCTTCAGTTTGCTGAAAATAAGCCAGGCTTGTCTTTGTT GCAGGAAAACGTAAGCACAAAGGGTGACGATACAGATGTCATGCTCACAGGTGACACTTTGAGCACCTCATTGCAGTCTTCCCCGGAAGTGCAGGTACCTCCTACCTCCTTCGAAACAGAAGAAACGCCCCGTCGGGTACCCCCAGACTC ACTCCCAACACAGGGAGAAACCCAGCCCACGTGTTTAGATGTTATTGTCCCGGAGGACTGTCTCCACCAGGACATCAGTCCAGACGCTGTGACTGTCCCGGTTGAAATTCTCTCAACTGATGCCAGAACCCACAGCCTGGATAACAGGTC CCAGGACTCTCCTGGCGAGAGTGAGGAGACCCTGCGACTCACCGAAAGTGACTCTGTTCTTGCTGATGACATCCTTGCCAGCAGGGTGAGTGTAGGGAGTAGTCTCCCGGAACTGGGACAGGAATTGCACAATAAACCATTTTCGGAAGA CCATCACAGTCATCGCCGGCTAGAGAAAAACTTAGAGGCTGTGGAGACTTTAAATCAGCTCAATTCTAAAGACGCAGCAAAAGAAGCAGGCTTGGTGTCTGCCCTCTCCTCGGACTCAACCAGTCAGGACAGCCTCCTGGAGGACAGCTT GTCAGCACCCTTCCCAGCCTCTGAGCCGTCCCTGGAAACCCCGGACTCTCTGGAGTCAGTGGATGTCCACGAAGCGCTACTGGACTCTTTAGGATCTCACACTCCCCAGAAACTAGTGCCCCCCGATAAGCCGGCAGACAGTGGCTACGA AACAGAGAACTTGGAGTCTCCCGAGTGGACCTTGCATCCCGCTCCCGAGGGCACCGCAGACTCAGAACCAGCCACCACGGGCGATGGCGGCCACAGCGGTCTGCCTCCCAACCCGGTCATTGTCATCTCAGATGCCGGCGATGGTCACAG AGGCACAGAAGTGACCCCTGAGACGTTCACAGCTGGCTCCCAGGGTTCATACCGAGACTCTGCGTACTTCTCAGACAATGACTCTGAGCCCGAGAAAAGGTCTGAGGAGGTCCCGGGAACCTCCCCATCCGCCTTGGTGTTGGTACAGGA GCAGCCCCTACCCGAGCCAGTCCTCCCCGAGCAAAGTCCTGCTGCCCAGGATAGCTGCCTGGAAGCCAGAAAGAGCCAGCCAGATGAAAGTTGTCTGTCTGCTTTGCACAACTCCAGTGACCTGGAATTAAGAGCCACGCCGGAGCCAGC ACAGACTGGTGTTCCCCAGCAGGTGCATCCCACGGAAGACGAGGCCAGCAGTCCCTGGAGTGTGCTGAATGCAGAACTTAGCAGCGGCGATGACTTCGAGACACAGGACGATCGCCCCTGCACCCTCGCTTCCACGGGGACCAACACGAA CGAACTCCTTGCCTACACCAATTCTGCGCTGGACAAGTCCCTGTCCAGCCACTCCGAGGGCCCGAAGTTGAAGGAGCCGGACATCGAAGGGAAGTACCTGGGGAAACTCGGGGTGTCAGGGATGCTCGACCTCTCAGAGGACGGGATGGA TGCAGACGAGGAGGACGAAAACAGCGACGACTCGGACGAGGACCTGCGGGCCTTCAACCTGCATAGCCTCAGCTCCGAGTCGGAGGACGAGACCGAGCACCCCGTGCCCATCATCCTCAGCAACGAGGACGGAAGGCACCTGCGGAGTCT GTTGAAGCCCACAGCGGCCAATGCCCCCGACCCACTGCCCGAGGACTGGAAGAAGGAAAAGAAGGCAGTCACGTTTTTCGATGATGTCACAGTCTACCTGTTTGACCAGGAGACCCCAACCAAAGAGCTGGGGCCCTGTGGAGGAGAGGC GTGCGGCCCGGACCTGAGCGGCCCAGCCCCAGCCTCAGGCTCTCCCTACCTGAGCAGGTGCATCAACTCCGAAAGCTCCACCGACGAAGAAGGTGGTGGCTTTGAGTGGGATGATGACTTCTCCCCAGATCCTTTTATGTCAAAGACAAC AAGTAACCTGCTCAGCTCCAAGCCTTCTCTCCAAACATCCAAGTACTTTTCTCCGCCGCCACCGGCCCGGAGCACGGAGCAGAGCTGGCCGCACTCGGCGCCTTACTCCCGGTTCTCCATCTCTCCCGCCAACATTGCCAGCTTTTCCCT CACACACCTGACCGACTCGGACATCGAGCAGGGCGGAAGCAGCGAAGACGGAGAAAAGGACTAGGTGGCTGCCAACGCGCACGCTCGGGTCCGAGGCTGCTCCCCTGGAGCGGCGCCCCTGCGCCCTCAGCCCGAGCAGCGACATCCACT CGCCATTTGCTGACATGAGATTGGGAGGAAGAATCCAGAGGTGAAGAGGGAGACGGCTCTTAGCTGCGTTCAAGGCGGGGCCCTCGGGAGCCCAGGTGCAGAGCGAGGCCGTGTCCAGGAGCCGGCGTCCCTCAGTGCCCCGTGCACCCG CGGCCGCGGCCTCCCAGGCAGTGCTCATGCGCTGGCCGTCGGGGGAGGCAGGGGCACAGCCTCCATGTGCGCGCGCGTGTGGAGCTGTGTGCACCGCATGTGTGCTTTCCACAGGGGCGTCTCTGCGTCCACGCCTGCACATCCCGGCGC ACGTGTGGGCACCACAGAGGACACGTGAGGGGAATGGTCACCAGTGAGCCATATTTATTATTTCTAGAGAAATCACGAACTGCTTTCTGTAATTGCACTGTGGATAAATGTTCCGAGAGTCTCCATTGTTGTACAGGATCTTCAGTTATT CGAGGGGAATGAGGCAGGTCAAGCCGATGCTAGCCACTAGTTTGATTTTTTTTCTGTTTTATAGTTTGCGCTGCATGGTACTTGTGAAGCTTAAATATTTTGAGTGTTCTACTGTGTCTAGGATTGTTGGGATTGTACATATGGTACTCT TTCATAAATGATAAATGATTCTGAATGTTAGTGTTTTATGTTCATATAGGAAATATTTTCATTGAGTCCAAAATACCACTGTTTTGTTGATGGACTTGAATGCATTTTTGTCTCTTCTTGATGAAGCGGCTTTGCCGCAGCAAATGAGGC TTCTCTCTGAGGAGCTGAGAGGTCTTGCAGCCTCTCCTTGTCATTCTCCCACCCCACATCCCATTTTTTAAAGCCCTTTTGGTAAAAACCAACAGGTTGTGGCCGCAGACCTCAGATGGACCCGGCCCATCCCTGGGGACGTGCTGGCGT GGCAGGTCCAGAGAGCTGCACCCTGCACGGGGCACCGCACCGCTTCCCTCCGCGCAGCTCTTCTGCCTGGTTTTCGGAGGCCAGGCTGCTGGGAAGCTTCCGTGTTCCTGTCAGTCCTTCCTTCAAGAAGCCGGGGAACTCAGGCAGACT CATCTCCGCAGAGCATACCAGCCGTGGGGGACCGTTCGACTTGATGATGTGTGCACACTTCAGGTGGTGGGGACTTGAGCTTTAAAAAAACCTCCACAGCCGAATCTTCTCCTCCGAGCCACTCCACGTCACGTCCAGCTGGGCCTGGCC AGTCTGTGGTTATCCATGTGGGATGAGATAACACCACATCCTGCAGCTGTGAAGGGGGATGGACAAGGGACGACGGCCGACGGCAGAGCATCAGCAGCCGACACATAGTTCGGGTCGGGGCCTTGGGTGGTCCTGCATGGCCCGGGACTC ATCTCACGGACCCTCCGTTCTGCATTAAGCCCCAGGTTCTCTTCTGGCTTTGAAAGGGCCCGAGTGCTCCCAGTGTAGCTTCGTCACATCGTCACGAGCCCCTGTGGTCATGGGCGACCTCACACCTCCCTCCCTGAGTTCTGCTCTGAC ATAAGGAAGTCCTCGGTGGCTGGTGCAGCGCGGCTGTGCTGTGCTGGGGAGGCAGCCGTTCCTTCGGGGGTCCTTGGGCCTGCAGTCCCCTCATACTCACCCTTCACCCAACATATTTTCCGGTGCTGATATGTTTCCAGACTCCAGCGC AACCTGGGGTGCTCTCCAGACCCGTGCAGGGGCCGCCTGGGGTACACGGAAGGAAGTTGAGTCCTAGTGCAAAATGCAGGCGGACGTTGCCAGAGAGTGCGCAGCAAATGACCTTCATTGCCAGTTCCACCCTACTCCTCTCATTTTTTA TACTAAGCAATAACTTTCCAAAGCAAGAAGTTCAGGATGGAGAGAGTCCCCTCCTGTGTAGGCATGGGGTGGATGCGGTGCCCACCTGGGCTATGTGGGGAGCACCACTGTCTCGGGATGCGCGAATTTTTTTTTTTTTTTTAATTAACA GGGCATTAGAAGATGATTTTGCCAAAATTGTCATGACTCTGAATTCTTGCTGTGGGGACTTCCTGAGTTTTCTCAGTTTTTACATCTAAGATTAGTCTTGGCTGAAGAGAAATGAGACGTGATTATACTACTTTTTCAATTGCAGGTTTA AGGAGTTCAGATTTAATGACCAAAGTCATACAGATCATGGAATCTGTCGTCGTCTTATACAGTGTCAGCCTCGAGTACATTTATTAACCTTTTGGGGCTGTCAGTTTTCCACTAGGATTAAGATTTTGGCCGGGCGCGGTGGCTCACGCC TGCAATCCCAACACATTGGGGGGTCGAGGCGGACGGATCACTTTGAGCCCAGGAGTTCAAGACCAGCCTGGGCAACATGGCGAAACCTCGTCTCTACTAAAAATACAAAATATATATATATATATATATACTAGCTGGGGCACATAGTGG TGTGCACCTGTAGTCCCAGCTGCTTGGGAGGCTGAGGTGGGAGGATGGCTAGAGCCCAGGAGATGGGTGTTGCAGTGAGCTGAGACCATGCCACTGTACTCTAGCCTGGGTAACAGCCAGACCCTGTCTCAAAAAAAAAAACAATTTTTT TCATAACATAATTCCCATTTTTATTTATTTTGAGTCACTCATAATTAATTGCCAAAAAAGCATTTTATACATTGAGTTGGGGGGTAGTGGATCTTAGTGTGGTGTTGCATGGAGGGGCGAGATTTTATATTTATAATCAACACGTGGGTT AACATGTTTTTTTGAAATCCAAGCAATACACAGGAAATTTAAGTAGAATAAAAATTGCAGCCCATTTTTGAAATGTCAGCATGTGCTGTGTTCAGTTCAGGTTTTTGTTGTTTGTTTTGTTATTTTTTAACTAATAAGTTGGTTATCAGT GGTGGGTTTTCAAAATGTACTTGTTCTAATAAGTTGTACAATGAACTAAATCAGTGGCATTCTCTAGATAATGTGGGGGAAGGTTAGAATATTTTCTGGCCTTCTATGGGGTAGCAACCCAGAATCAATCTGAATTAGTCCTGTTTTGGT GGAGTTTGTACATTTTAAATCCTATAACAAAAATAATCTAGTTTTCATTTCCTTACTAGCTAGATGCGAATTTGTCTTTTTGAATGACCCTGTCAATAAGCCAGAAAGGGCAACCCAGAAAAAGTGCTCCCCACATCCTTCTGAGACTTG GCCTGTGTGTGTGGACGAGAAGCCATTCACCGTAAGGGTGCAGAAAGCTCGACCAAGCCGAATTGCAAACAACGTTCGTTCTATTTTTAAATGTACAGGTTCGATCGTTTCTATAGAAATGGGTTTATCTAAGAAAAGTCTTGGTTTGTC TTGCTGCTGTAAAAGGCCTTTCCAAACCCCTCCTTTTATTCCTGTTTCCCGAAATAAGGTATTTGTAGAGTTAAGGACCTACTGCATGCCTGTCCCCAGGGCCCCGGTGGAAGGAAGGCAGCGCCTGCTCTTCCTTAACTCAGCCCATCA TCTGAAAATTCAGAAGTGAACCAAGGGTTAGACGCCAGAGGTTGGGCTTCTGTTAGAGTGGCTTCAAAACATGAGCCTTATGGGAAGTAGCCTTAAAAAAAGAATGGGTATACGCAGTGACTTCCGATGGAAATCTCCAAAACAATATTC CTAAGTAGCAATGGGGTTGGCTCAAGTCTTTATTAACAAAGAACATTCTCTTTCATCTATAAAGAAATTCTTAAAGATGCATTGACAGTGTTGAATTACCAACAGCCTGTGAAGATCAGTTTGACCGGTGTGGACACGTGCTGGTTAAGC ACTCAGGCCTACGTGGGCCGAGCGGGATCTTGATCATGGGGCTGGTGTATGGATCCACCGTCGGATTCCGTCTGCAGAGGAGGACGTAGGGGGCCGTCACACCCACCAGGCCTCCCTGCTGTGCTTTAACACAGGCAGAAGAGGTTCATG GCAATATAATAGTCAATGAACTTTCAGTTTAAATTGTGTACATTTTTAAATTGTAAGATTTTTACTGTATATTGATGCATAGTGTGATTCAATAAATTGCTTGTAATTTAAAAACTATTTAATATTCAAAATAAATATAGTTATATATTT ATAAA |
C-Truncated Transcript (5CDS-3UTR) Sequences |
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Fusion Protein Sequence for TMEM230_LMTK2 |
In-frame Fusion Protein Sequences. |
>TMEM230_LMTK2_ENST00000379283_ENST00000297293_5086833_97820039 length=203nt MRPCAAGWGGLRCAEALVSAMIRQERSTSYQEAVRPALPSSKPCLLTSPAVLVKLLSSSASTSRPPNLGHLWQPSSSVPLHRAASLAKVRQFQLSEELVQVVENSELADEQDKETVRVQGPGILPGTDPTGSSDTGSITSCPIIHSNTNS PYCHSEPASTTSSSNTACCPGSSPAASSTPAAGSVHPAPANFKSASTTSYSPC |
N-Truncated Protein (5UTR-3CDS) Sequences |
>TMEM230_LMTK2_ENST00000492419_ENST00000297293_5086833_97820039 length=371nt MLALQMNEEQYQKDGQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKLELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEEEVAAAYADELVRCPSCSFPALLDSDVKRFSCPNPHCRKETCRKCQGLWKEHNG LTCEELAEKDDIKYRTSIEEKMTAARIRKCHKCGTGLIKSEGCNRMSCRCGAQMCYLCRVSINGYDHFCQHPRSPGAPCQECSRCSLWTDPTEDDEKLIEEIQKEAEEEQKRKNGENTFKRIGPPLEKPVEKVQRVEALPRPVPQNLPQP QMPPYAFAHPPFPLPPVRPVFNNFPLNMGPIPAPYVPPLPNVRVNYDFGPIHMPLEHNLPMHFGPQPRHRF |
C-Truncated Protein (5CDS-3UTR) Sequences |
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Personalized Fusion Protein Sequence for TMEM230_LMTK2 |
TCGA Kinase/DNA-binding Domain Mutated Fusion Protein Sequences |
| Num | Gene Group | Domain Loci | Fusion Protein ID | Fusion Gene Name | Partner | Mutated Residue in WT Protein | Seq. Length | Mutated Residue in Fusion Protein |
CCLE Kinase/DNA-binding Domain Mutated Fusion Protein Sequences |
| Num | Gene Group | Domain Loci | Fusion Protein ID | Fusion Gene Name | Partner | Mutated Residue in WT Protein | Seq. Length | Mutated Residue in Fusion Protein |
TCGA All Mutated Fusion Protein Sequences |
| Fusion Protein ID | Sample ID | Mutated Partner | AAchange in WT | Seq. Length | AAchange in Fusion |
CCLE All Mutated Fusion Protein Sequences |
| Fusion Protein ID | Sample ID | Mutated Partner | AAchange in WT | Seq. Length | AAchange in Fusion |
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Fusion Gene Exprssed Samples for TMEM230_LMTK2 |
RNA-seq based fusion gene expressed samples. |
| Source | Study | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB | LUAD | TCGA-62-A46U-01A | TMEM230 | chr20 | 5086833 | - | LMTK2 | chr7 | 97820039 | + | |
| ChimerDB | LUAD | TCGA-62-A46U | TMEM230 | chr20 | 5086833 | - | LMTK2 | chr7 | 5086833 | + |
DNA-seq based fusion gene expressed samples. |
| Source | Study | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | SV type |
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Related Drugs for TMEM230_LMTK2 |
PubMed Abstract Search With ['A-B' AND 'drug'], ['A::B' AND 'drug'] * For more details on the Studied, Reported, Approved Drugs targeting this fusion gene, Go to FusionPub. |
| PMID | Fusion Gene Name | Drug | Study Title |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |