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Fusion gene:C2orf70_CNOT10 (FusionGDB2 ID:HG339778TG25904) |
Fusion Gene Summary for C2orf70_CNOT10 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: C2orf70_CNOT10 | Fusion gene ID: hg339778tg25904 | Hgene | Tgene | Gene symbol | C2orf70 | CNOT10 | Gene ID | 339778 | 25904 |
| Gene name | ciliary microtubule inner protein 2C | CCR4-NOT transcription complex subunit 10 | |
| Synonyms | C2orf70|FAM166C | - | |
| Cytomap | 2p23.3 | 3p22.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | ciliary microtubule inner protein 2CUPF0573 protein C2orf70family with sequence similarity 166 member Cprotein FAM166C | CCR4-NOT transcription complex subunit 10 | |
| Modification date | 20240411 | 20240305 | |
| UniProtAcc | . | Q9H9A5 | |
| Ensembl transtripts involved in fusion gene | ENST00000329615, ENST00000409392, | ||
| Fusion gene scores | * DoF score | * DoF score (Degree of Frequency) = # partners X # break points X # disease types 2 X 2 X 2=8 | * DoF score (Degree of Frequency) = # partners X # break points X # disease types 3 X 12 X 7=252 |
| # samples | 2 | 27 | |
| ** MAII score | ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) log2(2/8*10)=1.32192809488736 | ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) log2(27/252*10)=0.0995356735509144 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: C2orf70 [Title/Abstract] AND CNOT10 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | C2orf70(26785554)-CNOT10(32800949), # samples:1 | ||
| Fusion gene breakpoints across C2orf70 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across CNOT10 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Breakpoints for C2orf70_CNOT10 |
| RNA-seq based exon junction arranged fusion gene breakpoints from 8 resources (TCGA, CCLE, cBioPortal, GenBank, ChimerDB, ChimerKB, ChildHoodFusions, and GTEx). For the expressed sample information, go to Fusion Gene Sample section. |
| Hgene | Hchr | Hbp | Tgene | Tchr | Tbp |
| C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 |
| DNA-seq based exon junction arranged fusion gene breakpoints from dbVar. For the expressed sample information, go to Fusion Gene Sample section. |
| Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | SV type |
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Tumorigenic MoA (Mechanism of Action) Scenarios of Fusion Genes for C2orf70_CNOT10 |
| To generate these tumorigenic scenario annotations, we implemented a deduction-first, retrieval-later computational framework. The pipeline first applies rule-guided reasoning across ten core mechanistic categories (M1–M10) derived from fusion gene biology to infer candidate mechanisms, tumorigenic scenarios, targeting points, and targeting backgrounds. To ensure empirical accountability, a governed Python workflow retrieves literature candidates via NCBI E-utilities and Europe PMC using tiered searches. Using JSON Schema-constrained LLM evidence judges (GPT-5.6 Luna and Terra), retrieved articles are evaluated for specificity and confidence without de novo PMID generation. This produces two distinct versions: a strict version restricted to high- or medium-confidence fusion-specific evidence, and an extended version incorporating broader gene-, pathway-, and contextual evidence. |
| Constitutively Active Kinases, Catalytic Domain Dysregulation, & Transmembrane Ligand Fusions | Aberrant Chimeric Transcription Factor / Fusion Transcription Factor Activity | Epigenetic Reprogramming / Histone Modifier Dysregulation | Chromatin Remodeling Dysregulation | Condensate-Driven Transcriptional Rewiring / LLP | Promoter / Enhancer Hijacking | Dominant-Negative Antagonism | Cell Cycle / Checkpoint Bypass / RNA Processing Dysregulation | Subcellular Mislocalization / Spatial Dysregulation | Nuclear Body / Sub-organellar Architecture Disruption & Differentiation Blockade |  |  |  |  |  |  |  |  |  |  |
* Strict version: Restricted to high- or medium-confidence fusion-specific evidence.
| Fusion Gene Name | Mechanism Category | Mechanism PubMed | Tumorigenic Scenarios | Tumorigenic Scenario PubMed | Targeting Points | Targeting PubMed | Mechanism Background | Mechanism Background PubMed |
| C2orf70-CNOT10 | Cell Cycle / Checkpoint Bypass / RNA Processing Dysregulation M8 | Juxtaposition alters CCR4-NOT complex subunit 10, perturbing deadenylation kinetics and stabilization of pro-survival transcripts. | mRNA decay modulators; translation blockers | Carcinomas |
* Extended version: Includes all strict-level fusion evidence plus broader gene-, pathway-, and low-confidence contextual evidence.
| Fusion Gene Name | Mechanism Category | Mechanism PubMed | Tumorigenic Scenarios | Tumorigenic Scenario PubMed | Targeting Points | Targeting PubMed | Mechanism Background | Mechanism Background PubMed |
| C2orf70-CNOT10 | Cell Cycle / Checkpoint Bypass / RNA Processing Dysregulation M8 | Evidence level: Indirect gene evidence; Confidence: Medium; PMID: 36586408; Title: The human CNOT1-CNOT10-CNOT11 complex forms a structural platform for protein-protein interactions.; PMID: 33085544; Title: Analysis of CNOT Family Gene Expression, Clinicopathological Features, and Prognosis Value in Hepatocellular Carcinoma. | Juxtaposition alters CCR4-NOT complex subunit 10, perturbing deadenylation kinetics and stabilization of pro-survival transcripts. | Evidence level: Limited indirect gene evidence; Confidence: Low; PMID: 36586408; Title: The human CNOT1-CNOT10-CNOT11 complex forms a structural platform for protein-protein interactions.; PMID: 33085544; Title: Analysis of CNOT Family Gene Expression, Clinicopathological Features, and Prognosis Value in Hepatocellular Carcinoma. | mRNA decay modulators; translation blockers | Carcinomas | Evidence level: Limited indirect gene evidence; Confidence: Low; PMID: 33085544; Title: Analysis of CNOT Family Gene Expression, Clinicopathological Features, and Prognosis Value in Hepatocellular Carcinoma. |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | CNOT10 |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
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Fusion Genomic Features for C2orf70_CNOT10 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence) of In-frame fusion genes. FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| C2orf70 | chr2 | 26785554 | + | CNOT10 | chr3 | 32800949 | + | 1.71e-06 | 1.00e+00 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence) of 5UTR-3CSD fusion genes (N-truncated cases). |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| C2orf70 | chr2 | 26785554 | + | CNOT10 | chr3 | 32800949 | + | 1.71e-06 | 1.00e+00 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence) of 5CDS-3UTR fusion genes (C-truncated cases). |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of six genomic regulatory feature tracks across a ±5 kb window centered on the fusion breakpoints. We input the breakpoint sequences into AlphaGenome and obtained predicted genome tracks at single-base-pair resolution for each modality by running a single forward pass over the reference sequence. Specifically, for each breakpoint, AlphaGenome processed and returned predicted track data across diverse modalities, which were then averaged across all tracks within each output type and visualized across the ±5 kb window. The left panel shows the 5'-gene breakpoint ±5 kb area, and the right panel shows the 3'-gene breakpoint area, with tracks grouped by category: chromatin accessibility (DNase-seq, ATAC-seq), active transcription (RNA-seq, CAGE), and chromatin binding (ChIP-Histone, ChIP-TF). |
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Fusion Gene ORF Annotations for C2orf70_CNOT10 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 5UTR-3CDS | ENST00000409392 | ENST00000328834 | C2orf70 | chr2 | 26785554 | + | CNOT10 | chr3 | 32800949 | + |
| 5UTR-3CDS | ENST00000409392 | ENST00000331889 | C2orf70 | chr2 | 26785554 | + | CNOT10 | chr3 | 32800949 | + |
| 5UTR-3CDS | ENST00000409392 | ENST00000454516 | C2orf70 | chr2 | 26785554 | + | CNOT10 | chr3 | 32800949 | + |
| 5UTR-3CDS | ENST00000409392 | ENST00000538368 | C2orf70 | chr2 | 26785554 | + | CNOT10 | chr3 | 32800949 | + |
| In-frame | ENST00000329615 | ENST00000328834 | C2orf70 | chr2 | 26785554 | + | CNOT10 | chr3 | 32800949 | + |
| In-frame | ENST00000329615 | ENST00000331889 | C2orf70 | chr2 | 26785554 | + | CNOT10 | chr3 | 32800949 | + |
| In-frame | ENST00000329615 | ENST00000454516 | C2orf70 | chr2 | 26785554 | + | CNOT10 | chr3 | 32800949 | + |
| In-frame | ENST00000329615 | ENST00000538368 | C2orf70 | chr2 | 26785554 | + | CNOT10 | chr3 | 32800949 | + |
| ORFfinder Result Based On The Fusion Transcript Sequences of the In-frame Fusion Genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | Seq length (transcript) | Seq length (peptide) |
| ENST00000329615 | ENST00000328834 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 105 | 237 |
| ENST00000329615 | ENST00000331889 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 105 | 222 |
| ENST00000329615 | ENST00000454516 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 105 | 107 |
| ENST00000329615 | ENST00000538368 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 105 | 237 |
| ORFfinder Result Based On The Fusion Transcript Sequences of the 5UTR-3CDS Fusion Genes for N-Truncated Protein Search. |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | Seq length (transcript) | Seq length (peptide) |
| ENST00000409392 | ENST00000328834 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 0 | 196 |
| ENST00000409392 | ENST00000331889 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 0 | 201 |
| ENST00000409392 | ENST00000454516 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 0 | 201 |
| ENST00000409392 | ENST00000538368 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 0 | 201 |
| ORFfinder Result Based On The Fusion Transcript Sequences of the 5CDS-3UTR Fusion Genes for C-Truncated Protein Search. |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | Seq length (transcript) | Seq length (peptide) |
| DeepORF Prediction of The Coding Potential Based on The Fusion Transcript Sequence of In-frame Fusion Genes. DeepORF is a Coding Potential Classifier Based on Convolutional Neural Network by Comparing the Real Ribo-seq Data. If the No-coding Score < 0.5 and Coding Score > 0.5, Then The In-frame Fusion Transcript is Predicted as Being Likely Translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | No-coding score | Coding score |
| ENST00000329615 | ENST00000328834 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 6.08e-03 | 9.94e-01 |
| ENST00000329615 | ENST00000331889 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 7.00e-03 | 9.93e-01 |
| ENST00000329615 | ENST00000454516 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 6.92e-03 | 9.93e-01 |
| ENST00000329615 | ENST00000538368 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 1.97e-01 | 8.03e-01 |
| DeepORF Prediction of The Coding Potential Based on The Fusion Transcript Sequence of 5UTR-3CDS Fusion Genes (Potential N-Truncated Proteins). |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | No-coding score | Coding score |
| ENST00000409392 | ENST00000328834 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 0.00e+00 | 6.41e-03 |
| ENST00000409392 | ENST00000331889 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 0.00e+00 | 7.09e-03 |
| ENST00000409392 | ENST00000454516 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 0.00e+00 | 7.06e-03 |
| ENST00000409392 | ENST00000538368 | C2orf70 | chr2 | 26785554 | CNOT10 | chr3 | 32800949 | 0.00e+00 | 8.44e-01 |
| DeepORF Prediction of The Coding Potential Based on The Fusion Transcript Sequence of 5CDS-3UTR Fusion Genes (Potential C-Truncated Proteins). |
| Henst | Tenst | Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | No-coding score | Coding score |
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Fusion Protein Retained/Non-Retained Functional Features for C2orf70_CNOT10 |
| Protein Level Annotation from FGviewer * Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at download page. Minus value of BPloci means that the break pointn is located before the CDS. |
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| - In-frame and retained protein feature among the 13 regional features (visualization across fusion protein length). |
| No matching images found for ${hg}_${tg}. |
| - In-frame and retained protein feature among the 13 regional features (texts). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | CNOT10 | chr2:26785554 | chr3:32800949 | ENST00000328834 | Q9H9A5 | 12 | 19 | 602_612 | 531.6666666666666 | 745.0 | Compositional bias | Polar residues |
| Tgene | CNOT10 | chr2:26785554 | chr3:32800949 | ENST00000328834 | Q9H9A5 | 12 | 19 | 602_634 | 531.6666666666666 | 745.0 | Region | Disordered |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | CNOT10 | chr2:26785554 | chr3:32800949 | ENST00000328834 | Q9H9A5 | 12 | 19 | 74_107 | 531.6666666666666 | 745.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | CNOT10 | chr2:26785554 | chr3:32800949 | ENST00000328834 | Q9H9A5 | 12 | 19 | 183_199 | 531.6666666666666 | 745.0 | Compositional bias | Low complexity |
| Tgene | CNOT10 | chr2:26785554 | chr3:32800949 | ENST00000328834 | Q9H9A5 | 12 | 19 | 1_16 | 531.6666666666666 | 745.0 | Compositional bias | Basic and acidic residues |
| Tgene | CNOT10 | chr2:26785554 | chr3:32800949 | ENST00000328834 | Q9H9A5 | 12 | 19 | 484_495 | 531.6666666666666 | 745.0 | Compositional bias | Polar residues |
| Tgene | CNOT10 | chr2:26785554 | chr3:32800949 | ENST00000328834 | Q9H9A5 | 12 | 19 | 496_506 | 531.6666666666666 | 745.0 | Compositional bias | Low complexity |
| Tgene | CNOT10 | chr2:26785554 | chr3:32800949 | ENST00000328834 | Q9H9A5 | 12 | 19 | 183_204 | 531.6666666666666 | 745.0 | Region | Disordered |
| Tgene | CNOT10 | chr2:26785554 | chr3:32800949 | ENST00000328834 | Q9H9A5 | 12 | 19 | 1_25 | 531.6666666666666 | 745.0 | Region | Disordered |
| Tgene | CNOT10 | chr2:26785554 | chr3:32800949 | ENST00000328834 | Q9H9A5 | 12 | 19 | 477_521 | 531.6666666666666 | 745.0 | Region | Disordered |
| - Retained PPIs in in-frame fusion. |
| Partner | Hgene | Hbp | Tgene | Tbp | ENST | UniProt | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Hgene | Hbp | Tgene | Tbp | ENST | UniProt | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Fusion Transcript Sequence for C2orf70_CNOT10 |
| In-frame Fusion Transcript Sequences. |
>C2orf70_CNOT10_ENST00000329615_ENST00000328834_26785554_32800949 length=1009nt Breakpoint=105nt GCGCCAGGCTCGCTGTACTCGCGCACCCACCATGGCCTCCCGCAGCGCGGGCACCCTACTGACCGAGTTCAATGCCGCCTACGTGCCCCCTGGACTCATGCCCGGGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGG TGATAACCTCATGGCTTTGAATCATGCAGATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTTTTGGGACATTTATATGCTGCAGAAGCCCTCATCTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGA GAATGTCACTGATGTCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGTAAGCGGGCCCCTCAGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTGTGATGCTGTT CAACCTTGGCAGCGCTTACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTTGCTGGCAGTCTACCTTGAACTGCAGAATGGTAATACTCA GCTGGCCTTACAGATCATCAAAAGGAATCAGCTGCTCCCTGCAGTGAAAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATACTT CACTTTTGGAAAACTGTTACCTGAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGCTGTTAATTTTGAGTCAATTCTACCCCTGACATTTGGCCAAAAGCTTACTTAAAATTAA GGATTTACTAAGTCATCATCAGCTGTTTTTCTTAATTTCAGCCAGACTATTAATTTTGAGCCATTATGTAATATATGCCATAGGCAATTAAAACATAATTTTATCAGAA >C2orf70_CNOT10_ENST00000329615_ENST00000331889_26785554_32800949 length=848nt Breakpoint=105nt GCGCCAGGCTCGCTGTACTCGCGCACCCACCATGGCCTCCCGCAGCGCGGGCACCCTACTGACCGAGTTCAATGCCGCCTACGTGCCCCCTGGACTCATGCCCGGGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGG TGATAACCTCATGGCTTTGAATCATGCAGATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTTTTGGGACATTTATATGCTGCAGAAGCCCTCATCTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGA GAATGTCACTGATGTCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGTAAGCGGGCCCCTCAGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTGTGATGCTGTT CAACCTTGGCAGCGCTTACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTTGCTGGCAGTCTACCTTGAACTGCAGAATGGTAATACTCA GCTGGCCTTACAGATCATCAAAAGGAATCAGCTGCTCCCTGCAGTGAAAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATACTT CACTTTTGGAAAACTGTTACCTGAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGCTGTTAA >C2orf70_CNOT10_ENST00000329615_ENST00000454516_26785554_32800949 length=846nt Breakpoint=105nt GCGCCAGGCTCGCTGTACTCGCGCACCCACCATGGCCTCCCGCAGCGCGGGCACCCTACTGACCGAGTTCAATGCCGCCTACGTGCCCCCTGGACTCATGCCCGGGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGG TGATAACCTCATGGCTTTGAATCATGCAGATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTTTTGGGACATTTATATGCTGCAGAAGCCCTCATCTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGA GAATGTCACTGATGTCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGTAAGCGGGCCCCTCAGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTGTGATGCTGTT CAACCTTGGCAGCGCTTACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTTGCTGGCAGTCTACCTTGAACTGCAGAATGGTAATACTCA GCTGGCCTTACAGATCATCAAAAGGAATCAGCTGCTCCCTGCAGTGAAAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATACTT CACTTTTGGAAAACTGTTACCTGAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGCTGTT >C2orf70_CNOT10_ENST00000329615_ENST00000538368_26785554_32800949 length=798nt Breakpoint=105nt GCGCCAGGCTCGCTGTACTCGCGCACCCACCATGGCCTCCCGCAGCGCGGGCACCCTACTGACCGAGTTCAATGCCGCCTACGTGCCCCCTGGACTCATGCCCGGGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGG TGATAACCTCATGGCTTTGAATCATGCAGATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTTTTGGGACATTTATATGCTGCAGAAGCCCTCATCTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGA GAATGTCACTGATGTCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAGGTTAATGAGGACATCTTTGATCAGAACTGGTCACTGTTTCCATTTCCCTCCTGTCATAATTCAGGATGTGTGGAAATTTAGGCATGGTGGTAATGAGAAG AAAGTTTTAGGTTGGCTTTCCACATTTTTGTCTGTACTTACTTTGTAGCAGTTGTTTGCTAAGTAGACCTGAGAGTTAATGATCACATCATCTAAATTCTCACTTTTGAAAGGCTGGTACTGTTAGAATGGTTAATTTTGGTTCTGATAC TATTTATTTGTTTTCCTTTGGAGTGATTCTAAAATCCATAGGGGAGTAAAAATATTGCATTCAAGAGTCAGTTTTAGTCCAGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGTAGCAGGAGGGTCACTTGAGCCCAA GAGTTCAAGACCAGCCTGGGCAACCTGGTGAGACCCTGTCTCTATTTT |
| N-Truncated Transcript (5UTR-3CDS) Sequences |
>C2orf70_CNOT10_ENST00000409392_ENST00000328834_26785554_32800949 length=904nt Breakpoint=0nt GTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGGTGATAACCTCATGGCTTTGAATCATGCAGATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTTTTGGGACATTTATATGCTGCAGAAGCCCTCAT CTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGAGAATGTCACTGATGTCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGTAAGCGGGCCCCTCA GTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTGTGATGCTGTTCAACCTTGGCAGCGCTTACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGC CATCTTGCTGGCAGTCTACCTTGAACTGCAGAATGGTAATACTCAGCTGGCCTTACAGATCATCAAAAGGAATCAGCTGCTCCCTGCAGTGAAAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCC CATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATACTTCACTTTTGGAAAACTGTTACCTGAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGCTGTTAATTTTGAG TCAATTCTACCCCTGACATTTGGCCAAAAGCTTACTTAAAATTAAGGATTTACTAAGTCATCATCAGCTGTTTTTCTTAATTTCAGCCAGACTATTAATTTTGAGCCATTATGTAATATATGCCATAGGCAATTAAAACATAATTTTATC AGAA >C2orf70_CNOT10_ENST00000409392_ENST00000331889_26785554_32800949 length=743nt Breakpoint=0nt GTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGGTGATAACCTCATGGCTTTGAATCATGCAGATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTTTTGGGACATTTATATGCTGCAGAAGCCCTCAT CTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGAGAATGTCACTGATGTCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGTAAGCGGGCCCCTCA GTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTGTGATGCTGTTCAACCTTGGCAGCGCTTACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGC CATCTTGCTGGCAGTCTACCTTGAACTGCAGAATGGTAATACTCAGCTGGCCTTACAGATCATCAAAAGGAATCAGCTGCTCCCTGCAGTGAAAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCC CATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATACTTCACTTTTGGAAAACTGTTACCTGAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGCTGTTAA >C2orf70_CNOT10_ENST00000409392_ENST00000454516_26785554_32800949 length=741nt Breakpoint=0nt GTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGGTGATAACCTCATGGCTTTGAATCATGCAGATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTTTTGGGACATTTATATGCTGCAGAAGCCCTCAT CTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGAGAATGTCACTGATGTCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGTAAGCGGGCCCCTCA GTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTGTGATGCTGTTCAACCTTGGCAGCGCTTACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGC CATCTTGCTGGCAGTCTACCTTGAACTGCAGAATGGTAATACTCAGCTGGCCTTACAGATCATCAAAAGGAATCAGCTGCTCCCTGCAGTGAAAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCC CATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATACTTCACTTTTGGAAAACTGTTACCTGAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGCTGTT >C2orf70_CNOT10_ENST00000409392_ENST00000538368_26785554_32800949 length=693nt Breakpoint=0nt GTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGGTGATAACCTCATGGCTTTGAATCATGCAGATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTTTTGGGACATTTATATGCTGCAGAAGCCCTCAT CTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGAGAATGTCACTGATGTCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAGGTTAATGAGGACATCTTTGATCAGAACTGGTCACTGTTTCCATTTCCCTCCTGTC ATAATTCAGGATGTGTGGAAATTTAGGCATGGTGGTAATGAGAAGAAAGTTTTAGGTTGGCTTTCCACATTTTTGTCTGTACTTACTTTGTAGCAGTTGTTTGCTAAGTAGACCTGAGAGTTAATGATCACATCATCTAAATTCTCACTT TTGAAAGGCTGGTACTGTTAGAATGGTTAATTTTGGTTCTGATACTATTTATTTGTTTTCCTTTGGAGTGATTCTAAAATCCATAGGGGAGTAAAAATATTGCATTCAAGAGTCAGTTTTAGTCCAGGCGTGGTGGCTCACGCCTGTAAT CCCAGCACTTTGGGAGGCTGTAGCAGGAGGGTCACTTGAGCCCAAGAGTTCAAGACCAGCCTGGGCAACCTGGTGAGACCCTGTCTCTATTTT |
| C-Truncated Transcript (5CDS-3UTR) Sequences |
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Fusion Protein Sequence for C2orf70_CNOT10 |
| In-frame Fusion Protein Sequences. |
>C2orf70_CNOT10_ENST00000329615_ENST00000328834_26785554_32800949 length=237nt MASRSAGTLLTEFNAAYVPPGLMPGCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRS EYDKARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPAVKTHSEVRKKPVFQPVHPIQPIQMPAFTTVQRK >C2orf70_CNOT10_ENST00000329615_ENST00000331889_26785554_32800949 length=222nt MSEPEGISLKRVAVVEDFFDIIYSMHVESSAEPGKAPKHAGQKKTYRAIAETYAFLPREAVTRFLMSCTECQKRMHFNSNGLEPKENEPPSPLVSGIIDYNMPLTSTYLKQMKLRVMNSQEQDETSVSSEDFDMSDSTWMSADPHLASSL SPSQDERMRSPQNLHSQEDGIRKLLGCSNDTKTDSAGHRGRRTKGNEKWDFPSRMPQCYATFQFKRRRGVVL >C2orf70_CNOT10_ENST00000329615_ENST00000454516_26785554_32800949 length=107nt MASRSAGTLLTEFNAAYVPPGLMPGCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQG >C2orf70_CNOT10_ENST00000329615_ENST00000538368_26785554_32800949 length=237nt MASRSAGTLLTEFNAAYVPPGLMPGCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRS EYDKARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPAVKTHSEVRKKPVFQPVHPIQPIQMPAFTTVQRK |
| N-Truncated Protein (5UTR-3CDS) Sequences |
>C2orf70_CNOT10_ENST00000409392_ENST00000328834_26785554_32800949 length=196nt MIECWTLEERPLLGSLRHMAPIRKRRLITFNEADESVNYKTGPKPVRFLGPSTSTQIKVKNSASVTVSPASAIQTSAGATANRFQSGSRRKAAQRSAPSRATALVGTGAPGHPQASPGAASAENGGTHLPPAKVLLSDKKPTPQRVIKLK RTPLCATAPCLPSPTATRQANSLKPLPGEAARALGVRTENGKNKGN >C2orf70_CNOT10_ENST00000409392_ENST00000331889_26785554_32800949 length=201nt MALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEAILLAVYLELQN GNTQLALQIIKRNQLLPAVKTHSEVRKKPVFQPVHPIQPIQMPAFTTVQRK >C2orf70_CNOT10_ENST00000409392_ENST00000454516_26785554_32800949 length=201nt MALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEAILLAVYLELQN GNTQLALQIIKRNQLLPAVKTHSEVRKKPVFQPVHPIQPIQMPAFTTVQRK >C2orf70_CNOT10_ENST00000409392_ENST00000538368_26785554_32800949 length=201nt MALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEAILLAVYLELQN GNTQLALQIIKRNQLLPAVKTHSEVRKKPVFQPVHPIQPIQMPAFTTVQRK |
| C-Truncated Protein (5CDS-3UTR) Sequences |
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Personalized Fusion Protein Sequence for C2orf70_CNOT10 |
| TCGA Kinase/DNA-binding Domain Mutated Fusion Protein Sequences |
| Num | Gene Group | Domain Loci | Fusion Protein ID | Fusion Gene Name | Partner | Mutated Residue in WT Protein | Seq. Length | Mutated Residue in Fusion Protein |
| CCLE Kinase/DNA-binding Domain Mutated Fusion Protein Sequences |
| Num | Gene Group | Domain Loci | Fusion Protein ID | Fusion Gene Name | Partner | Mutated Residue in WT Protein | Seq. Length | Mutated Residue in Fusion Protein |
| TCGA All Mutated Fusion Protein Sequences |
| Fusion Protein ID | Sample ID | Mutated Partner | AAchange in WT | Seq. Length | AAchange in Fusion |
| CCLE All Mutated Fusion Protein Sequences |
| Fusion Protein ID | Sample ID | Mutated Partner | AAchange in WT | Seq. Length | AAchange in Fusion |
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Fusion Gene Exprssed Samples for C2orf70_CNOT10 |
| RNA-seq based fusion gene expressed samples. |
| Source | Study | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | FusionScan | GSE122401 | C2orf70 | chr2 | 26785554 | + | CNOT10 | chr3 | 32800949 | + |
| DNA-seq based fusion gene expressed samples. |
| Source | Study | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | SV type |
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Related Drugs for C2orf70_CNOT10 |
| PubMed Abstract Search With ['A-B' AND 'drug'], ['A::B' AND 'drug'] * For more details on the Studied, Reported, Approved Drugs targeting this fusion gene, Go to FusionPub. |
| PMID | Fusion Gene Name | Drug | Study Title |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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