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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene Breakpoints

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Tumorigenic MoA (Mechanism of Action) Scenarios of Fusion Geness

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Fusion Genomic Features

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Fusion Gene ORF Annotations

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Fusion Protein Retained/Non-Retained Functional Features

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Fusion Transcript Sequences

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Fusion Protein Sequences

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Personalized Fusion Protein Sequences

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Fusion Gene Expressed Samples

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Related Drugs

Fusion gene:ITCH_MANBAL (FusionGDB2 ID:HG83737TG63905)

Fusion Gene Summary for ITCH_MANBAL

check button Fusion gene summary
Fusion gene informationFusion gene name: ITCH_MANBAL
Fusion gene ID: hg83737tg63905
HgeneTgene
Gene symbol

ITCH

MANBAL

Gene ID

83737

63905

Gene nameitchy E3 ubiquitin protein ligasemannosidase beta like
SynonymsADMFD|AIF4|AIP4|NAPP1-
Cytomap

20q11.22

20q11.23

Type of geneprotein-codingprotein-coding
DescriptionE3 ubiquitin-protein ligase Itchy homologHECT-type E3 ubiquitin transferase Itchy homologNFE2-associated polypeptide 1atrophin-1 interacting protein 4itchy E3 ubiquitin protein ligase homologprotein MANBALmannosidase beta A likemannosidase, beta A, lysosomal-like
Modification date2024040320240305
UniProtAcc

Q96J02

Q9NQG1

Ensembl transtripts involved in fusion geneENST00000262650, ENST00000374864, 
ENST00000483727, ENST00000535650, 
Fusion gene scores* DoF score* DoF score (Degree of Frequency) = # partners X # break points X # disease types
40 X 36 X 32=46080
* DoF score (Degree of Frequency) = # partners X # break points X # disease types
2 X 11 X 5=110
# samples 19618
** MAII score** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)
log2(1961/46080*10)=-1.23255118125016
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)
log2(8/110*10)=-0.459431618637297
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: ITCH [Title/Abstract] AND MANBAL [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointITCH(32996598)-MANBAL(35944710), # samples:1

check buttonFusion gene breakpoints across ITCH (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure
check buttonFusion gene breakpoints across MANBAL (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

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Fusion Gene Breakpoints for ITCH_MANBAL


check button RNA-seq based exon junction arranged fusion gene breakpoints from 8 resources (TCGA, CCLE, cBioPortal, GenBank, ChimerDB, ChimerKB, ChildHoodFusions, and GTEx). For the expressed sample information, go to Fusion Gene Sample section.
HgeneHchrHbpTgeneTchrTbp
ITCHchr2032996598MANBALchr2032996598
ITCHchr2032996598MANBALchr2035944711


check button DNA-seq based exon junction arranged fusion gene breakpoints from dbVar. For the expressed sample information, go to Fusion Gene Sample section.
HgeneHchrHbpTgeneTchrTbpSV type


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Tumorigenic MoA (Mechanism of Action) Scenarios of Fusion Genes for ITCH_MANBAL


check button To generate these tumorigenic scenario annotations, we implemented a deduction-first, retrieval-later computational framework. The pipeline first applies rule-guided reasoning across ten core mechanistic categories (M1–M10) derived from fusion gene biology to infer candidate mechanisms, tumorigenic scenarios, targeting points, and targeting backgrounds. To ensure empirical accountability, a governed Python workflow retrieves literature candidates via NCBI E-utilities and Europe PMC using tiered searches. Using JSON Schema-constrained LLM evidence judges (GPT-5.6 Luna and Terra), retrieved articles are evaluated for specificity and confidence without de novo PMID generation. This produces two distinct versions: a strict version restricted to high- or medium-confidence fusion-specific evidence, and an extended version incorporating broader gene-, pathway-, and contextual evidence.
* We have 10 tumorigenic mechanism categories of fusion genes as shown below.
Constitutively Active Kinases, Catalytic Domain Dysregulation, & Transmembrane Ligand FusionsAberrant Chimeric Transcription Factor / Fusion Transcription Factor ActivityEpigenetic Reprogramming / Histone Modifier DysregulationChromatin Remodeling DysregulationCondensate-Driven Transcriptional Rewiring / LLPPromoter / Enhancer HijackingDominant-Negative AntagonismCell Cycle / Checkpoint Bypass / RNA Processing DysregulationSubcellular Mislocalization / Spatial DysregulationNuclear Body / Sub-organellar Architecture Disruption & Differentiation Blockade

* Strict version: Restricted to high- or medium-confidence fusion-specific evidence.
Fusion Gene NameMechanism CategoryMechanism PubMedTumorigenic ScenariosTumorigenic Scenario PubMedTargeting PointsTargeting PubMedMechanism BackgroundMechanism Background PubMed
ITCH-MANBAL
Promoter / Enhancer Hijacking
M6
ITCH HECT E3 ligase promoter drives mannosidase beta-like (MANBAL) expression, modifying Golgi glycosylation pathways.Glycosylation pathway inhibitors; proteasome inhibitorsCarcinomas

* Extended version: Includes all strict-level fusion evidence plus broader gene-, pathway-, and low-confidence contextual evidence.
Fusion Gene NameMechanism CategoryMechanism PubMedTumorigenic ScenariosTumorigenic Scenario PubMedTargeting PointsTargeting PubMedMechanism BackgroundMechanism Background PubMed
ITCH-MANBAL
Promoter / Enhancer Hijacking
M6
ITCH HECT E3 ligase promoter drives mannosidase beta-like (MANBAL) expression, modifying Golgi glycosylation pathways.Glycosylation pathway inhibitors; proteasome inhibitorsCarcinomasEvidence level: Indirect gene evidence; Confidence: Medium; PMID: 34709988; Title: Screening and cellular validation of prognostic genes regulated by super enhancers in oral squamous cell carcinoma.; PMID: 31517839; Title: Using weighted gene co-expression network analysis to identify key modules and hub genes in tongue squamous cell carcinoma.

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ITCH

Q96J02

MANBAL

Q9NQG1


check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneITCH

GO:0006511

ubiquitin-dependent protein catabolic process

15678106

HgeneITCH

GO:0006513

protein monoubiquitination

34927784

HgeneITCH

GO:0016567

protein ubiquitination

17592138|25631046

HgeneITCH

GO:0035519

protein K29-linked ubiquitination

17028573|18628966

HgeneITCH

GO:0039532

negative regulation of cytoplasmic pattern recognition receptor signaling pathway

27736772

HgeneITCH

GO:0070534

protein K63-linked ubiquitination

18718448|19592251

HgeneITCH

GO:0070936

protein K48-linked ubiquitination

19881509|27736772|30328013


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Fusion Genomic Features for ITCH_MANBAL


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence) of In-frame fusion genes. FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
ITCHchr2032996598+MANBALchr2035944710+1.60e-071.00e+00


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence) of 5UTR-3CSD fusion genes (N-truncated cases).
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence) of 5CDS-3UTR fusion genes (C-truncated cases).
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of six genomic regulatory feature tracks across a ±5 kb window centered on the fusion breakpoints. We input the breakpoint sequences into AlphaGenome and obtained predicted genome tracks at single-base-pair resolution for each modality by running a single forward pass over the reference sequence. Specifically, for each breakpoint, AlphaGenome processed and returned predicted track data across diverse modalities, which were then averaged across all tracks within each output type and visualized across the ±5 kb window. The left panel shows the 5'-gene breakpoint ±5 kb area, and the right panel shows the 3'-gene breakpoint area, with tracks grouped by category: chromatin accessibility (DNase-seq, ATAC-seq), active transcription (RNA-seq, CAGE), and chromatin binding (ChIP-Histone, ChIP-TF).
genomic feature

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Fusion Gene ORF Annotations for ITCH_MANBAL

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-3UTRENST00000262650ENST00000373605ITCHchr20

32996598

+MANBALchr20

35944710

+
5CDS-3UTRENST00000262650ENST00000397150ITCHchr20

32996598

+MANBALchr20

35944710

+
5CDS-3UTRENST00000262650ENST00000397151ITCHchr20

32996598

+MANBALchr20

35944710

+
5CDS-3UTRENST00000262650ENST00000397152ITCHchr20

32996598

+MANBALchr20

35944710

+
5CDS-3UTRENST00000374864ENST00000373605ITCHchr20

32996598

+MANBALchr20

35944710

+
5CDS-3UTRENST00000374864ENST00000397150ITCHchr20

32996598

+MANBALchr20

35944710

+
5CDS-3UTRENST00000374864ENST00000397151ITCHchr20

32996598

+MANBALchr20

35944710

+
5CDS-3UTRENST00000374864ENST00000397152ITCHchr20

32996598

+MANBALchr20

35944710

+
Frame-shiftENST00000262650ENST00000373606ITCHchr20

32996598

+MANBALchr20

35944710

+
Frame-shiftENST00000374864ENST00000373606ITCHchr20

32996598

+MANBALchr20

35944710

+
In-frameENST00000262650ENST00000397156ITCHchr20

32996598

+MANBALchr20

35944710

+
In-frameENST00000374864ENST00000397156ITCHchr20

32996598

+MANBALchr20

35944710

+

check buttonORFfinder Result Based On The Fusion Transcript Sequences of the In-frame Fusion Genes.
HenstTenstHgeneHchrHbpTgeneTchrTbpSeq length
(transcript)
Seq length
(peptide)
ENST00000262650ENST00000397156ITCHchr2032996598MANBALchr2035944710348118
ENST00000374864ENST00000397156ITCHchr2032996598MANBALchr2035944710425214

check buttonORFfinder Result Based On The Fusion Transcript Sequences of the 5UTR-3CDS Fusion Genes for N-Truncated Protein Search.
HenstTenstHgeneHchrHbpTgeneTchrTbpSeq length
(transcript)
Seq length
(peptide)

check buttonORFfinder Result Based On The Fusion Transcript Sequences of the 5CDS-3UTR Fusion Genes for C-Truncated Protein Search.
HenstTenstHgeneHchrHbpTgeneTchrTbpSeq length
(transcript)
Seq length
(peptide)

check buttonDeepORF Prediction of The Coding Potential Based on The Fusion Transcript Sequence of In-frame Fusion Genes. DeepORF is a Coding Potential Classifier Based on Convolutional Neural Network by Comparing the Real Ribo-seq Data. If the No-coding Score < 0.5 and Coding Score > 0.5, Then The In-frame Fusion Transcript is Predicted as Being Likely Translated.
HenstTenstHgeneHchrHbpTgeneTchrTbpNo-coding scoreCoding score
ENST00000262650ENST00000397156ITCHchr2032996598MANBALchr20359447109.49e-015.10e-02
ENST00000374864ENST00000397156ITCHchr2032996598MANBALchr20359447108.98e-011.02e-01

check buttonDeepORF Prediction of The Coding Potential Based on The Fusion Transcript Sequence of 5UTR-3CDS Fusion Genes (Potential N-Truncated Proteins).
HenstTenstHgeneHchrHbpTgeneTchrTbpNo-coding scoreCoding score

check buttonDeepORF Prediction of The Coding Potential Based on The Fusion Transcript Sequence of 5CDS-3UTR Fusion Genes (Potential C-Truncated Proteins).
HenstTenstHgeneHchrHbpTgeneTchrTbpNo-coding scoreCoding score
ENST00000262650ENST00000373605ITCHchr2032996598MANBALchr20359447100.00e+009.47e-01
ENST00000262650ENST00000397150ITCHchr2032996598MANBALchr20359447100.00e+005.61e-01
ENST00000262650ENST00000397151ITCHchr2032996598MANBALchr20359447100.00e+009.47e-01
ENST00000262650ENST00000397152ITCHchr2032996598MANBALchr20359447100.00e+009.47e-01
ENST00000374864ENST00000373605ITCHchr2032996598MANBALchr20359447100.00e+008.95e-01
ENST00000374864ENST00000397150ITCHchr2032996598MANBALchr20359447100.00e+002.07e-01
ENST00000374864ENST00000397151ITCHchr2032996598MANBALchr20359447100.00e+008.95e-01
ENST00000374864ENST00000397152ITCHchr2032996598MANBALchr20359447100.00e+008.95e-01

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Fusion Protein Retained/Non-Retained Functional Features for ITCH_MANBAL

check buttonProtein Level Annotation from FGviewer
* Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at download page. Minus value of BPloci means that the break pointn is located before the CDS.
fgviewer annotation
- In-frame and retained protein feature among the 13 regional features (visualization across fusion protein length).
ITCH_MANBAL_chr20-32996598_chr20-35944710.png
ITCH_MANBAL_chr20-32996598_chr20-35944710.png

- In-frame and retained protein feature among the 13 regional features (texts).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneMANBALchr20:32996598chr20:35944710ENST00000397156Q9NQG12448_6450.086.0Compositional biasBasic and acidic residues
TgeneMANBALchr20:32996598chr20:35944710ENST00000397156Q9NQG12475_8550.086.0Compositional biasBasic residues
TgeneMANBALchr20:32996598chr20:35944710ENST00000397156Q9NQG12448_8550.086.0RegionDisordered

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426206_21570.66666666666667904.0Compositional biasBasic and acidic residues
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426236_24770.66666666666667904.0Compositional biasLow complexity
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426251_26570.66666666666667904.0Compositional biasPro residues
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426270_28170.66666666666667904.0Compositional biasPolar residues
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426282_29870.66666666666667904.0Compositional biasLow complexity
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J024261_11570.66666666666667904.0DomainC2
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426326_35970.66666666666667904.0DomainWW 1
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426358_39170.66666666666667904.0DomainWW 2
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426438_47170.66666666666667904.0DomainWW 3
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426478_51170.66666666666667904.0DomainWW 4
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426569_90370.66666666666667904.0DomainHECT
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426197_30170.66666666666667904.0RegionDisordered
HgeneITCHchr20:32996598chr20:35944710ENST00000262650Q96J02426574_58370.66666666666667904.0RegionMAP kinase docking site
TgeneMANBALchr20:32996598chr20:35944710ENST00000397156Q9NQG12424_4450.086.0TransmembraneHelical


check button - Retained PPIs in in-frame fusion.
PartnerHgeneHbpTgeneTbpENSTUniProtStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerHgeneHbpTgeneTbpENSTUniProtStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Fusion Transcript Sequence for ITCH_MANBAL

check button In-frame Fusion Transcript Sequences.
>ITCH_MANBAL_ENST00000262650_ENST00000397156_32996598_35944710 length=1297nt
Breakpoint=348nt
GTCTAGGGACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGG
ATCACAACTTGGTTCAATGGGTAGCCTCACCATGAAATCACAGCTTCAGATCACTGTCATCTCAGCAAAACTTAAGGAAAATAAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGTCAAAGAAGACAGA
AAAATGCAACAACACAAACAGTCCCAAGTGGAAGCAACCCCTTACAGTGAGGCTGAACCGTCTGAGCCCAGAAGTGCTGAGGTGACGAGGAAGCCCAAGGCTGCTGTTCCTTCTGTGAACAAGAGGCCCAAGAAAGAGACTAAGAAGAAG
CGGTAGAAGAGGAGGCCTGAGGAGCTGGGCGGGCAGGGAGAGGGTCTTGGGGACAGCCCTCCTGGGAATCTACATTGTGTTCCCCCGCATTCCAGGCTCAGGGTCTGAGGAGGCTGTGACGCCCTATGACCGCAGAGATCTAGACAGTCG
TAACAGTCCCCAGGCTCCAGCTGGGCAATCCACCACTTCCTCTTCCTTCTGCTTCTGTGACGGTTTAGAGTCAAGGGGGCTGAAACACACTGTGAGCATAGACTGTATTAGGTTTGTTCAGAAGCCGGGTCAGCTCACAGAGTCACATTT
TCTTGCTTAGTCATGTGTCCCTCCTTGAGTTGCCCCCTCCTTGTGGGTTTACACTACATTTGGGAGTCATTGTCTAATGCTGACAAGCACACCCTCTCCCATTATTTGTGCACTACAGATCTCCTCCTGATCAGTCACCTTTGTTGCTGC
TGTGTAGACAGAGCCAGGCCTCACCTGTTTGTTTAGGCCAAGATGCCATGGACATGCAGCGTTAGTGATCCCACTAGCTGTGACAGCCAGGCCCAGAAAATGCCTGGCGTGAGAGCCAGCAGACAGCCAGGCCAGGGTAGGCAGTGCCTG
CTTCTGCTCCATCAGGTGCAGGGGATTTGGCTGAAGGCGTGCATATTTCCTGGGCACAAACTTCCTGAGCCTCTGAAATGGGAGGCTCGTCAATTTCAGACCAACCTCTTTTCAACCCATCATAGCACGTTCAAGGTGTGCCTTTTACTT
CTACCTGTACATCCCCCATCCCTTCAATTCTTTCATTCCCTGACCAGTGAGAGGGTTCCTGGGGGAAGTATGGTGAATAAACTGACATGCATGCTTC

>ITCH_MANBAL_ENST00000374864_ENST00000397156_32996598_35944710 length=1374nt
Breakpoint=425nt
GCGCTCAGGCGCCTGCGCTTTAGCTGCTAACTCGCTCTAGTAGCTGTGGTCGGGGCTCGGGACCGGCTGCCATCTTAGTCTAGGGACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAA
CGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGGATCACAACTTGGTTCAATGGGTAGCCTCACCATGAAATCACAGCTTCAGATCACTGTCATCTCAGCAAAACTT
AAGGAAAATAAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAATGCAACAACACAAACAGTCCCAAGTGGAAGCAACCCCTTACAGTGAGGCTGAACCGTCTGAGCCCAGAA
GTGCTGAGGTGACGAGGAAGCCCAAGGCTGCTGTTCCTTCTGTGAACAAGAGGCCCAAGAAAGAGACTAAGAAGAAGCGGTAGAAGAGGAGGCCTGAGGAGCTGGGCGGGCAGGGAGAGGGTCTTGGGGACAGCCCTCCTGGGAATCTAC
ATTGTGTTCCCCCGCATTCCAGGCTCAGGGTCTGAGGAGGCTGTGACGCCCTATGACCGCAGAGATCTAGACAGTCGTAACAGTCCCCAGGCTCCAGCTGGGCAATCCACCACTTCCTCTTCCTTCTGCTTCTGTGACGGTTTAGAGTCA
AGGGGGCTGAAACACACTGTGAGCATAGACTGTATTAGGTTTGTTCAGAAGCCGGGTCAGCTCACAGAGTCACATTTTCTTGCTTAGTCATGTGTCCCTCCTTGAGTTGCCCCCTCCTTGTGGGTTTACACTACATTTGGGAGTCATTGT
CTAATGCTGACAAGCACACCCTCTCCCATTATTTGTGCACTACAGATCTCCTCCTGATCAGTCACCTTTGTTGCTGCTGTGTAGACAGAGCCAGGCCTCACCTGTTTGTTTAGGCCAAGATGCCATGGACATGCAGCGTTAGTGATCCCA
CTAGCTGTGACAGCCAGGCCCAGAAAATGCCTGGCGTGAGAGCCAGCAGACAGCCAGGCCAGGGTAGGCAGTGCCTGCTTCTGCTCCATCAGGTGCAGGGGATTTGGCTGAAGGCGTGCATATTTCCTGGGCACAAACTTCCTGAGCCTC
TGAAATGGGAGGCTCGTCAATTTCAGACCAACCTCTTTTCAACCCATCATAGCACGTTCAAGGTGTGCCTTTTACTTCTACCTGTACATCCCCCATCCCTTCAATTCTTTCATTCCCTGACCAGTGAGAGGGTTCCTGGGGGAAGTATGG
TGAATAAACTGACATGCATGCTTC


check button N-Truncated Transcript (5UTR-3CDS) Sequences

check button C-Truncated Transcript (5CDS-3UTR) Sequences
>ITCH_MANBAL_ENST00000262650_ENST00000373605_32996598_35944710 length=1301nt
Breakpoint=348nt
GTCTAGGGACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGG
ATCACAACTTGGTTCAATGGGTAGCCTCACCATGAAATCACAGCTTCAGATCACTGTCATCTCAGCAAAACTTAAGGAAAATAAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGTCAAAGAAGACAGA
AAAATGCAACAACACAAACAGTCCCAAGTGGAAGCAACCCCTTACAGTGAGGCTGAACCGTCTGAGCCCAGAAGTGCTGAGGTGACGAGGAAGCCCAAGGCTGCTGTTCCTTCTGTGAACAAGAGGCCCAAGAAAGAGACTAAGAAGAAG
CGGTAGAAGAGGAGGCCTGAGGAGCTGGGCGGGCAGGGAGAGGGTCTTGGGGACAGCCCTCCTGGGAATCTACATTGTGTTCCCCCGCATTCCAGGCTCAGGGTCTGAGGAGGCTGTGACGCCCTATGACCGCAGAGATCTAGACAGTCG
TAACAGTCCCCAGGCTCCAGCTGGGCAATCCACCACTTCCTCTTCCTTCTGCTTCTGTGACGGTTTAGAGTCAAGGGGGCTGAAACACACTGTGAGCATAGACTGTATTAGGTTTGTTCAGAAGCCGGGTCAGCTCACAGAGTCACATTT
TCTTGCTTAGTCATGTGTCCCTCCTTGAGTTGCCCCCTCCTTGTGGGTTTACACTACATTTGGGAGTCATTGTCTAATGCTGACAAGCACACCCTCTCCCATTATTTGTGCACTACAGATCTCCTCCTGATCAGTCACCTTTGTTGCTGC
TGTGTAGACAGAGCCAGGCCTCACCTGTTTGTTTAGGCCAAGATGCCATGGACATGCAGCGTTAGTGATCCCACTAGCTGTGACAGCCAGGCCCAGAAAATGCCTGGCGTGAGAGCCAGCAGACAGCCAGGCCAGGGTAGGCAGTGCCTG
CTTCTGCTCCATCAGGTGCAGGGGATTTGGCTGAAGGCGTGCATATTTCCTGGGCACAAACTTCCTGAGCCTCTGAAATGGGAGGCTCGTCAATTTCAGACCAACCTCTTTTCAACCCATCATAGCACGTTCAAGGTGTGCCTTTTACTT
CTACCTGTACATCCCCCATCCCTTCAATTCTTTCATTCCCTGACCAGTGAGAGGGTTCCTGGGGGAAGTATGGTGAATAAACTGACATGCATGCTTCAGAA

>ITCH_MANBAL_ENST00000262650_ENST00000397150_32996598_35944710 length=348nt
Breakpoint=348nt
GTCTAGGGACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGG
ATCACAACTTGGTTCAATGGGTAGCCTCACCATGAAATCACAGCTTCAGATCACTGTCATCTCAGCAAAACTTAAGGAAAATAAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGTCAAAGAAGACAGA
AAAATGCAACAACACAAACAGTCCCAAGTGGAAGCAACCCCTTACAGT

>ITCH_MANBAL_ENST00000262650_ENST00000397151_32996598_35944710 length=1301nt
Breakpoint=348nt
GTCTAGGGACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGG
ATCACAACTTGGTTCAATGGGTAGCCTCACCATGAAATCACAGCTTCAGATCACTGTCATCTCAGCAAAACTTAAGGAAAATAAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGTCAAAGAAGACAGA
AAAATGCAACAACACAAACAGTCCCAAGTGGAAGCAACCCCTTACAGTGAGGCTGAACCGTCTGAGCCCAGAAGTGCTGAGGTGACGAGGAAGCCCAAGGCTGCTGTTCCTTCTGTGAACAAGAGGCCCAAGAAAGAGACTAAGAAGAAG
CGGTAGAAGAGGAGGCCTGAGGAGCTGGGCGGGCAGGGAGAGGGTCTTGGGGACAGCCCTCCTGGGAATCTACATTGTGTTCCCCCGCATTCCAGGCTCAGGGTCTGAGGAGGCTGTGACGCCCTATGACCGCAGAGATCTAGACAGTCG
TAACAGTCCCCAGGCTCCAGCTGGGCAATCCACCACTTCCTCTTCCTTCTGCTTCTGTGACGGTTTAGAGTCAAGGGGGCTGAAACACACTGTGAGCATAGACTGTATTAGGTTTGTTCAGAAGCCGGGTCAGCTCACAGAGTCACATTT
TCTTGCTTAGTCATGTGTCCCTCCTTGAGTTGCCCCCTCCTTGTGGGTTTACACTACATTTGGGAGTCATTGTCTAATGCTGACAAGCACACCCTCTCCCATTATTTGTGCACTACAGATCTCCTCCTGATCAGTCACCTTTGTTGCTGC
TGTGTAGACAGAGCCAGGCCTCACCTGTTTGTTTAGGCCAAGATGCCATGGACATGCAGCGTTAGTGATCCCACTAGCTGTGACAGCCAGGCCCAGAAAATGCCTGGCGTGAGAGCCAGCAGACAGCCAGGCCAGGGTAGGCAGTGCCTG
CTTCTGCTCCATCAGGTGCAGGGGATTTGGCTGAAGGCGTGCATATTTCCTGGGCACAAACTTCCTGAGCCTCTGAAATGGGAGGCTCGTCAATTTCAGACCAACCTCTTTTCAACCCATCATAGCACGTTCAAGGTGTGCCTTTTACTT
CTACCTGTACATCCCCCATCCCTTCAATTCTTTCATTCCCTGACCAGTGAGAGGGTTCCTGGGGGAAGTATGGTGAATAAACTGACATGCATGCTTCAGAA

>ITCH_MANBAL_ENST00000262650_ENST00000397152_32996598_35944710 length=1301nt
Breakpoint=348nt
GTCTAGGGACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGG
ATCACAACTTGGTTCAATGGGTAGCCTCACCATGAAATCACAGCTTCAGATCACTGTCATCTCAGCAAAACTTAAGGAAAATAAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGTCAAAGAAGACAGA
AAAATGCAACAACACAAACAGTCCCAAGTGGAAGCAACCCCTTACAGTGAGGCTGAACCGTCTGAGCCCAGAAGTGCTGAGGTGACGAGGAAGCCCAAGGCTGCTGTTCCTTCTGTGAACAAGAGGCCCAAGAAAGAGACTAAGAAGAAG
CGGTAGAAGAGGAGGCCTGAGGAGCTGGGCGGGCAGGGAGAGGGTCTTGGGGACAGCCCTCCTGGGAATCTACATTGTGTTCCCCCGCATTCCAGGCTCAGGGTCTGAGGAGGCTGTGACGCCCTATGACCGCAGAGATCTAGACAGTCG
TAACAGTCCCCAGGCTCCAGCTGGGCAATCCACCACTTCCTCTTCCTTCTGCTTCTGTGACGGTTTAGAGTCAAGGGGGCTGAAACACACTGTGAGCATAGACTGTATTAGGTTTGTTCAGAAGCCGGGTCAGCTCACAGAGTCACATTT
TCTTGCTTAGTCATGTGTCCCTCCTTGAGTTGCCCCCTCCTTGTGGGTTTACACTACATTTGGGAGTCATTGTCTAATGCTGACAAGCACACCCTCTCCCATTATTTGTGCACTACAGATCTCCTCCTGATCAGTCACCTTTGTTGCTGC
TGTGTAGACAGAGCCAGGCCTCACCTGTTTGTTTAGGCCAAGATGCCATGGACATGCAGCGTTAGTGATCCCACTAGCTGTGACAGCCAGGCCCAGAAAATGCCTGGCGTGAGAGCCAGCAGACAGCCAGGCCAGGGTAGGCAGTGCCTG
CTTCTGCTCCATCAGGTGCAGGGGATTTGGCTGAAGGCGTGCATATTTCCTGGGCACAAACTTCCTGAGCCTCTGAAATGGGAGGCTCGTCAATTTCAGACCAACCTCTTTTCAACCCATCATAGCACGTTCAAGGTGTGCCTTTTACTT
CTACCTGTACATCCCCCATCCCTTCAATTCTTTCATTCCCTGACCAGTGAGAGGGTTCCTGGGGGAAGTATGGTGAATAAACTGACATGCATGCTTCAGAA

>ITCH_MANBAL_ENST00000374864_ENST00000373605_32996598_35944710 length=1378nt
Breakpoint=425nt
GCGCTCAGGCGCCTGCGCTTTAGCTGCTAACTCGCTCTAGTAGCTGTGGTCGGGGCTCGGGACCGGCTGCCATCTTAGTCTAGGGACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAA
CGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGGATCACAACTTGGTTCAATGGGTAGCCTCACCATGAAATCACAGCTTCAGATCACTGTCATCTCAGCAAAACTT
AAGGAAAATAAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAATGCAACAACACAAACAGTCCCAAGTGGAAGCAACCCCTTACAGTGAGGCTGAACCGTCTGAGCCCAGAA
GTGCTGAGGTGACGAGGAAGCCCAAGGCTGCTGTTCCTTCTGTGAACAAGAGGCCCAAGAAAGAGACTAAGAAGAAGCGGTAGAAGAGGAGGCCTGAGGAGCTGGGCGGGCAGGGAGAGGGTCTTGGGGACAGCCCTCCTGGGAATCTAC
ATTGTGTTCCCCCGCATTCCAGGCTCAGGGTCTGAGGAGGCTGTGACGCCCTATGACCGCAGAGATCTAGACAGTCGTAACAGTCCCCAGGCTCCAGCTGGGCAATCCACCACTTCCTCTTCCTTCTGCTTCTGTGACGGTTTAGAGTCA
AGGGGGCTGAAACACACTGTGAGCATAGACTGTATTAGGTTTGTTCAGAAGCCGGGTCAGCTCACAGAGTCACATTTTCTTGCTTAGTCATGTGTCCCTCCTTGAGTTGCCCCCTCCTTGTGGGTTTACACTACATTTGGGAGTCATTGT
CTAATGCTGACAAGCACACCCTCTCCCATTATTTGTGCACTACAGATCTCCTCCTGATCAGTCACCTTTGTTGCTGCTGTGTAGACAGAGCCAGGCCTCACCTGTTTGTTTAGGCCAAGATGCCATGGACATGCAGCGTTAGTGATCCCA
CTAGCTGTGACAGCCAGGCCCAGAAAATGCCTGGCGTGAGAGCCAGCAGACAGCCAGGCCAGGGTAGGCAGTGCCTGCTTCTGCTCCATCAGGTGCAGGGGATTTGGCTGAAGGCGTGCATATTTCCTGGGCACAAACTTCCTGAGCCTC
TGAAATGGGAGGCTCGTCAATTTCAGACCAACCTCTTTTCAACCCATCATAGCACGTTCAAGGTGTGCCTTTTACTTCTACCTGTACATCCCCCATCCCTTCAATTCTTTCATTCCCTGACCAGTGAGAGGGTTCCTGGGGGAAGTATGG
TGAATAAACTGACATGCATGCTTCAGAA

>ITCH_MANBAL_ENST00000374864_ENST00000397150_32996598_35944710 length=425nt
Breakpoint=425nt
GCGCTCAGGCGCCTGCGCTTTAGCTGCTAACTCGCTCTAGTAGCTGTGGTCGGGGCTCGGGACCGGCTGCCATCTTAGTCTAGGGACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAA
CGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGGATCACAACTTGGTTCAATGGGTAGCCTCACCATGAAATCACAGCTTCAGATCACTGTCATCTCAGCAAAACTT
AAGGAAAATAAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAATGCAACAACACAAACAGTCCCAAGTGGAAGCAACCCCTTACAGT

>ITCH_MANBAL_ENST00000374864_ENST00000397151_32996598_35944710 length=1378nt
Breakpoint=425nt
GCGCTCAGGCGCCTGCGCTTTAGCTGCTAACTCGCTCTAGTAGCTGTGGTCGGGGCTCGGGACCGGCTGCCATCTTAGTCTAGGGACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAA
CGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGGATCACAACTTGGTTCAATGGGTAGCCTCACCATGAAATCACAGCTTCAGATCACTGTCATCTCAGCAAAACTT
AAGGAAAATAAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAATGCAACAACACAAACAGTCCCAAGTGGAAGCAACCCCTTACAGTGAGGCTGAACCGTCTGAGCCCAGAA
GTGCTGAGGTGACGAGGAAGCCCAAGGCTGCTGTTCCTTCTGTGAACAAGAGGCCCAAGAAAGAGACTAAGAAGAAGCGGTAGAAGAGGAGGCCTGAGGAGCTGGGCGGGCAGGGAGAGGGTCTTGGGGACAGCCCTCCTGGGAATCTAC
ATTGTGTTCCCCCGCATTCCAGGCTCAGGGTCTGAGGAGGCTGTGACGCCCTATGACCGCAGAGATCTAGACAGTCGTAACAGTCCCCAGGCTCCAGCTGGGCAATCCACCACTTCCTCTTCCTTCTGCTTCTGTGACGGTTTAGAGTCA
AGGGGGCTGAAACACACTGTGAGCATAGACTGTATTAGGTTTGTTCAGAAGCCGGGTCAGCTCACAGAGTCACATTTTCTTGCTTAGTCATGTGTCCCTCCTTGAGTTGCCCCCTCCTTGTGGGTTTACACTACATTTGGGAGTCATTGT
CTAATGCTGACAAGCACACCCTCTCCCATTATTTGTGCACTACAGATCTCCTCCTGATCAGTCACCTTTGTTGCTGCTGTGTAGACAGAGCCAGGCCTCACCTGTTTGTTTAGGCCAAGATGCCATGGACATGCAGCGTTAGTGATCCCA
CTAGCTGTGACAGCCAGGCCCAGAAAATGCCTGGCGTGAGAGCCAGCAGACAGCCAGGCCAGGGTAGGCAGTGCCTGCTTCTGCTCCATCAGGTGCAGGGGATTTGGCTGAAGGCGTGCATATTTCCTGGGCACAAACTTCCTGAGCCTC
TGAAATGGGAGGCTCGTCAATTTCAGACCAACCTCTTTTCAACCCATCATAGCACGTTCAAGGTGTGCCTTTTACTTCTACCTGTACATCCCCCATCCCTTCAATTCTTTCATTCCCTGACCAGTGAGAGGGTTCCTGGGGGAAGTATGG
TGAATAAACTGACATGCATGCTTCAGAA

>ITCH_MANBAL_ENST00000374864_ENST00000397152_32996598_35944710 length=1378nt
Breakpoint=425nt
GCGCTCAGGCGCCTGCGCTTTAGCTGCTAACTCGCTCTAGTAGCTGTGGTCGGGGCTCGGGACCGGCTGCCATCTTAGTCTAGGGACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAA
CGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGGATCACAACTTGGTTCAATGGGTAGCCTCACCATGAAATCACAGCTTCAGATCACTGTCATCTCAGCAAAACTT
AAGGAAAATAAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAATGCAACAACACAAACAGTCCCAAGTGGAAGCAACCCCTTACAGTGAGGCTGAACCGTCTGAGCCCAGAA
GTGCTGAGGTGACGAGGAAGCCCAAGGCTGCTGTTCCTTCTGTGAACAAGAGGCCCAAGAAAGAGACTAAGAAGAAGCGGTAGAAGAGGAGGCCTGAGGAGCTGGGCGGGCAGGGAGAGGGTCTTGGGGACAGCCCTCCTGGGAATCTAC
ATTGTGTTCCCCCGCATTCCAGGCTCAGGGTCTGAGGAGGCTGTGACGCCCTATGACCGCAGAGATCTAGACAGTCGTAACAGTCCCCAGGCTCCAGCTGGGCAATCCACCACTTCCTCTTCCTTCTGCTTCTGTGACGGTTTAGAGTCA
AGGGGGCTGAAACACACTGTGAGCATAGACTGTATTAGGTTTGTTCAGAAGCCGGGTCAGCTCACAGAGTCACATTTTCTTGCTTAGTCATGTGTCCCTCCTTGAGTTGCCCCCTCCTTGTGGGTTTACACTACATTTGGGAGTCATTGT
CTAATGCTGACAAGCACACCCTCTCCCATTATTTGTGCACTACAGATCTCCTCCTGATCAGTCACCTTTGTTGCTGCTGTGTAGACAGAGCCAGGCCTCACCTGTTTGTTTAGGCCAAGATGCCATGGACATGCAGCGTTAGTGATCCCA
CTAGCTGTGACAGCCAGGCCCAGAAAATGCCTGGCGTGAGAGCCAGCAGACAGCCAGGCCAGGGTAGGCAGTGCCTGCTTCTGCTCCATCAGGTGCAGGGGATTTGGCTGAAGGCGTGCATATTTCCTGGGCACAAACTTCCTGAGCCTC
TGAAATGGGAGGCTCGTCAATTTCAGACCAACCTCTTTTCAACCCATCATAGCACGTTCAAGGTGTGCCTTTTACTTCTACCTGTACATCCCCCATCCCTTCAATTCTTTCATTCCCTGACCAGTGAGAGGGTTCCTGGGGGAAGTATGG
TGAATAAACTGACATGCATGCTTCAGAA


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Fusion Protein Sequence for ITCH_MANBAL

check button In-frame Fusion Protein Sequences.
>ITCH_MANBAL_ENST00000262650_ENST00000397156_32996598_35944710 length=118nt
MPWTCSVSDPTSCDSQAQKMPGVRASRQPGQGRQCLLLLHQVQGIWLKACIFPGHKLPEPLKWEARQFQTNLFSTHHSTFKVCLLLLPVHPPSLQFFHSLTSERVPGGSMVNKLTCML

>ITCH_MANBAL_ENST00000374864_ENST00000397156_32996598_35944710 length=214nt
MSDSGSQLGSMGSLTMKSQLQITEPPKMNPVVEPLSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRECGFIRLKPDTNKVAFVSAQNTGVVEVEEGEVNGQELCIASHSIARISFAKEPHVEQVS
PALLPARSCLLFAAVCGVSLFLFREITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKVTP


check button N-Truncated Protein (5UTR-3CDS) Sequences

check button C-Truncated Protein (5CDS-3UTR) Sequences

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Personalized Fusion Protein Sequence for ITCH_MANBAL


check button TCGA Kinase/DNA-binding Domain Mutated Fusion Protein Sequences
NumGene GroupDomain LociFusion Protein IDFusion Gene NamePartnerMutated Residue in WT ProteinSeq. LengthMutated Residue in Fusion Protein

check button CCLE Kinase/DNA-binding Domain Mutated Fusion Protein Sequences

NumGene GroupDomain LociFusion Protein IDFusion Gene NamePartnerMutated Residue in WT ProteinSeq. LengthMutated Residue in Fusion Protein

check button TCGA All Mutated Fusion Protein Sequences


Fusion Protein IDSample IDMutated PartnerAAchange in WTSeq. LengthAAchange in Fusion

check button CCLE All Mutated Fusion Protein Sequences


Fusion Protein IDSample IDMutated PartnerAAchange in WTSeq. LengthAAchange in Fusion

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Fusion Gene Exprssed Samples for ITCH_MANBAL


check buttonRNA-seq based fusion gene expressed samples.
SourceStudyDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDBCOADTCGA-CM-6170-01AITCH

chr20

32996598-MANBAL

chr20

0

+
ChimerDBCOADTCGA-CM-6170-01AITCH

chr20

32996598+MANBAL

chr20

32996598

+
WashUCOADTCGA-CM-6170-01AITCH

chr20

32996598+MANBAL

chr20

35944711

+

check buttonDNA-seq based fusion gene expressed samples.
SourceStudyDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrandSV type


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Related Drugs for ITCH_MANBAL


check button PubMed Abstract Search With ['A-B' AND 'drug'], ['A::B' AND 'drug']
* For more details on the Studied, Reported, Approved Drugs targeting this fusion gene, Go to FusionPub.
PMIDFusion Gene NameDrugStudy Title

check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status