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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:RAB3IP-CHD1L (FusionGDB2 ID:HG117177TG9557) |
Fusion Gene Summary for RAB3IP-CHD1L |
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Fusion gene information | Fusion gene name: RAB3IP-CHD1L | Fusion gene ID: hg117177tg9557 | Hgene | Tgene | Gene symbol | RAB3IP | CHD1L | Gene ID | 117177 | 9557 |
Gene name | RAB3A interacting protein | chromodomain helicase DNA binding protein 1 like | |
Synonyms | RABIN3|RABIN8 | ALC1|CHDL | |
Cytomap | ('RAB3IP')('CHD1L') 12q15 | 1q21.1 | |
Type of gene | protein-coding | protein-coding | |
Description | rab-3A-interacting proteinSSX2 interacting proteinrab3A-interacting proteinrabin-3 | chromodomain-helicase-DNA-binding protein 1-likeamplified in liver cancer 1amplified in liver cancer protein 1 | |
Modification date | 20200327 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000247833, ENST00000362025, ENST00000378815, ENST00000483530, ENST00000550536, ENST00000325555, ENST00000550847, ENST00000551641, ENST00000553099, | ||
Fusion gene scores | * DoF score | 21 X 9 X 12=2268 | 10 X 11 X 5=550 |
# samples | 27 | 14 | |
** MAII score | log2(27/2268*10)=-3.0703893278914 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(14/550*10)=-1.97400479146706 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: RAB3IP [Title/Abstract] AND CHD1L [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | RAB3IP(70150443)-CHD1L(146736080), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | RAB3IP-CHD1L seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. RAB3IP-CHD1L seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. RAB3IP-CHD1L seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. RAB3IP-CHD1L seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | RAB3IP | GO:0006612 | protein targeting to membrane | 23382462 |
Tgene | CHD1L | GO:0006338 | chromatin remodeling | 19661379 |
Tgene | CHD1L | GO:0006974 | cellular response to DNA damage stimulus | 19661379 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | Non-Cancer | 61N | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
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Fusion Gene ORF analysis for RAB3IP-CHD1L |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-3UTR | ENST00000247833 | ENST00000467213 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-3UTR | ENST00000362025 | ENST00000467213 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-3UTR | ENST00000378815 | ENST00000467213 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-3UTR | ENST00000483530 | ENST00000467213 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-3UTR | ENST00000550536 | ENST00000467213 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000247833 | ENST00000361293 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000247833 | ENST00000369258 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000247833 | ENST00000369259 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000362025 | ENST00000361293 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000362025 | ENST00000369258 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000362025 | ENST00000369259 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000378815 | ENST00000361293 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000378815 | ENST00000369258 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000378815 | ENST00000369259 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000483530 | ENST00000361293 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000483530 | ENST00000369258 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000483530 | ENST00000369259 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000550536 | ENST00000361293 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000550536 | ENST00000369258 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5CDS-intron | ENST00000550536 | ENST00000369259 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5UTR-3CDS | ENST00000325555 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5UTR-3UTR | ENST00000325555 | ENST00000467213 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5UTR-intron | ENST00000325555 | ENST00000361293 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5UTR-intron | ENST00000325555 | ENST00000369258 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
5UTR-intron | ENST00000325555 | ENST00000369259 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
In-frame | ENST00000247833 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
In-frame | ENST00000362025 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
In-frame | ENST00000378815 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
In-frame | ENST00000483530 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
In-frame | ENST00000550536 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-3CDS | ENST00000550847 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-3CDS | ENST00000551641 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-3CDS | ENST00000553099 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-3UTR | ENST00000550847 | ENST00000467213 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-3UTR | ENST00000551641 | ENST00000467213 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-3UTR | ENST00000553099 | ENST00000467213 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-intron | ENST00000550847 | ENST00000361293 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-intron | ENST00000550847 | ENST00000369258 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-intron | ENST00000550847 | ENST00000369259 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-intron | ENST00000551641 | ENST00000361293 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-intron | ENST00000551641 | ENST00000369258 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-intron | ENST00000551641 | ENST00000369259 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-intron | ENST00000553099 | ENST00000361293 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-intron | ENST00000553099 | ENST00000369258 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
intron-intron | ENST00000553099 | ENST00000369259 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000247833 | RAB3IP | chr12 | 70150443 | + | ENST00000431239 | CHD1L | chr1 | 146736080 | + | 2973 | 886 | 316 | 2721 | 801 |
ENST00000378815 | RAB3IP | chr12 | 70150443 | + | ENST00000431239 | CHD1L | chr1 | 146736080 | + | 2792 | 705 | 135 | 2540 | 801 |
ENST00000483530 | RAB3IP | chr12 | 70150443 | + | ENST00000431239 | CHD1L | chr1 | 146736080 | + | 2792 | 705 | 135 | 2540 | 801 |
ENST00000550536 | RAB3IP | chr12 | 70150443 | + | ENST00000431239 | CHD1L | chr1 | 146736080 | + | 3102 | 1015 | 445 | 2850 | 801 |
ENST00000362025 | RAB3IP | chr12 | 70150443 | + | ENST00000431239 | CHD1L | chr1 | 146736080 | + | 3092 | 1005 | 435 | 2840 | 801 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000247833 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + | 0.002680936 | 0.99731904 |
ENST00000378815 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + | 0.002285659 | 0.9977144 |
ENST00000483530 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + | 0.002285659 | 0.9977144 |
ENST00000550536 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + | 0.001284069 | 0.998716 |
ENST00000362025 | ENST00000431239 | RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + | 0.001302025 | 0.998698 |
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Fusion Genomic Features for RAB3IP-CHD1L |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + | 4.48E-06 | 0.99999547 |
RAB3IP | chr12 | 70150443 | + | CHD1L | chr1 | 146736080 | + | 4.48E-06 | 0.99999547 |
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Fusion Protein Features for RAB3IP-CHD1L |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:70150443/chr1:146736080) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369258 | 5 | 23 | 638_675 | 192 | 898.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369259 | 0 | 17 | 638_675 | 0 | 694.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000431239 | 5 | 20 | 638_675 | 192 | 804.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369258 | 5 | 23 | 351_513 | 192 | 898.0 | Domain | Helicase C-terminal | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369258 | 5 | 23 | 704_897 | 192 | 898.0 | Domain | Macro | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369259 | 0 | 17 | 351_513 | 0 | 694.0 | Domain | Helicase C-terminal | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369259 | 0 | 17 | 58_223 | 0 | 694.0 | Domain | Helicase ATP-binding | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369259 | 0 | 17 | 704_897 | 0 | 694.0 | Domain | Macro | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000431239 | 5 | 20 | 351_513 | 192 | 804.0 | Domain | Helicase C-terminal | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000431239 | 5 | 20 | 704_897 | 192 | 804.0 | Domain | Macro | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369259 | 0 | 17 | 174_177 | 0 | 694.0 | Motif | Note=DEAH box | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369259 | 0 | 17 | 71_78 | 0 | 694.0 | Nucleotide binding | ATP | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369258 | 5 | 23 | 615_673 | 192 | 898.0 | Region | Required for helicase activity | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369259 | 0 | 17 | 615_673 | 0 | 694.0 | Region | Required for helicase activity | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000431239 | 5 | 20 | 615_673 | 192 | 804.0 | Region | Required for helicase activity |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369258 | 5 | 23 | 58_223 | 192 | 898.0 | Domain | Helicase ATP-binding | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000431239 | 5 | 20 | 58_223 | 192 | 804.0 | Domain | Helicase ATP-binding | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369258 | 5 | 23 | 174_177 | 192 | 898.0 | Motif | Note=DEAH box | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000431239 | 5 | 20 | 174_177 | 192 | 804.0 | Motif | Note=DEAH box | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000369258 | 5 | 23 | 71_78 | 192 | 898.0 | Nucleotide binding | ATP | |
Tgene | CHD1L | chr12:70150443 | chr1:146736080 | ENST00000431239 | 5 | 20 | 71_78 | 192 | 804.0 | Nucleotide binding | ATP |
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Fusion Gene Sequence for RAB3IP-CHD1L |
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>71387_71387_1_RAB3IP-CHD1L_RAB3IP_chr12_70150443_ENST00000247833_CHD1L_chr1_146736080_ENST00000431239_length(transcript)=2973nt_BP=886nt GGGCCAGGGCCGTGACACCTGCGACGAGCCCCGCCTGGCGCCAGGGGGCGCGGAAGCGCGTCCGCCCCCAGGCCCCATGCCGGGCTCGCC CCGCCCCTGCCGGCCACACCCCCCTACCCCGCCCTCCCTCCGTGAGGACCGGCCGCTCCCGGCTCCCGGCCCCCGGCCCCGCTTCCGGCG CAGGCGCAGTCCCGCGTTCCCTCGGCGGCTGCCGGCGTAGTGAGCCCGCCGCCGTGGAGTGTAGCGGAAAGGGCTCGCCGTCCTCCTCCG TTTCTCGCTGCTTCGGGACGCGCTCTCTGCGGCTCTGTGAGCGCCCCTGAGCGCCGGCAGCGGCCGCGGTGGGTTCTTCAGGTTATCTTA TGATGAGGCTTTTGCTATGGCTAATGATCCCTTGGAAGGCTTCCATGAAGTAAACCTTGCTTCACCTACTTCTCCGGACCTTCTTGGTGT GTATGAATCAGGAACTCAAGAGCAGACTACCTCACCAAGTGTCATCTACCGGCCACACCCTTCAGCTTTATCCTCTGTACCTATCCAGGC AAATGCATTAGATGTTTCTGAACTTCCTACACAACCCGTGTATTCATCCCCCAGACGTTTAAATTGTGCGGAAATATCTAGTATCAGCTT TCATGTTACAGACCCAGCCCCTTGCTCTACCTCTGGAGTCACAGCTGGATTAACTAAATTAACTACAAGAAAGGACAACTATAATGCAGA GAGAGAGTTTTTACAGGGTGCTACTATAACAGAGGCTTGCGATGGCAGTGATGATATTTTTGGGTTGAGTACTGATAGTCTGTCTCGTTT ACGAAGCCCATCTGTTTTGGAAGTTAGAGAAAAGGGCTATGAACGATTAAAAGAAGAACTCGCAAAAGCTCAGAGGTTCTCAGTAGTCTT CAGTCTCCTGTTGACCGGAACTCCCATCCAGAACAGCCTCCAAGAGCTCTACTCCCTCCTCAGTTTTGTGGAGCCTGATCTCTTTTCCAA GGAAGAGGTGGGAGATTTTATTCAACGCTACCAGGATATTGAGAAAGAATCTGAGTCAGCAAGTGAACTGCACAAACTCTTGCAGCCATT TCTGCTGAGGCGAGTGAAAGCTGAGGTAGCTACAGAGCTTCCCAAGAAGACAGAAGTAGTGATATACCATGGCATGTCAGCATTGCAGAA GAAATACTACAAGGCCATTTTGATGAAAGACCTAGATGCATTTGAAAATGAGACGGCAAAGAAAGTTAAACTACAGAACATTTTGTCCCA GCTTCGAAAGTGTGTGGATCACCCATATTTGTTTGATGGTGGAGTTGGCATGAACTTAACAGCAGCAGATACTGTGATTTTTGTTGACAG TGACTTTAATCCTCAGAATGACTTGCAAGCAGCTGCCAGGGCTCATCGCATTGGCCAAAACAAGTCTGTTAAAGTTATTCGGCTGATTGG TCGAGACACTGTGGAAGAAATAGTCTATAGGAAAGCAGCCTCCAAACTGCAGCTCACCAACATGATCATAGAAGGAGGCCATTTTACTCT GGGAGCCCAGAAACCCGCTGCCGATGCTGACCTCCAGTTGAGTGAGATACTCAAATTTGGTTTGGATAAACTGCTGGCCTCTGAGGGGAG CACCATGGATGAAATAGACCTGGAGTCCATACTGGGAGAAACAAAAGATGGCCAGTGGGTCTCTGATGCCTTGCCTGCAGCAGAAGGAGG GAGCAGAGATCAAGAGGAAGGAAAAAATCATATGTACTTATTTGAAGGTAAAGATTATTCTAAAGAGCCCAGTAAGGAAGACAGAAAATC ATTTGAACAACTGGTAAACCTTCAGAAAACCCTTTTGGAGAAAGCTAGTCAAGAGGGCCGATCACTCCGAAATAAAGGCAGTGTTCTCAT CCCAGGCCTTGTGGAGGGATCTACCAAAAGGAAGCGGGTTCTGAGTCCAGAAGAGCTGGAGGACAGACAGAAGAAAAGACAAGAAGCAGC TGCCAAGAGAAGGAGACTCATAGAGGAGAAGAAGAGGCAAAAGGAAGAGGCTGAACATAAGAAAAAGATGGCCTGGTGGGAATCCAACAA TTACCAGTCCTTCTGCCTGCCCTCTGAGGAGAGCGAGCCAGAGGACCTTGAGAATGGGGAAGAGAGCTCTGCTGAGCTGGATTACCAAGA CCCAGATGCTACTTCCCTCAAGTACGTTAGTGGTGATGTCACCCACCCTCAGGCTGGGGCCGAGGATGCTCTCATTGTGCACTGCGTAGA TGACTCTGGCCACTGGGGCAGAGGTGGTTTATTTACAGCTCTGGAAAAGCGATCCGCTGAGCCAAGAAAAATATATGAGCTGGCTGGGAA AATGAAAGACCTGAGTTTGGGAGGTGTCCTTTTATTTCCTGTTGATGATAAAGAATCAAGAAACAAAGGGCAAGATTTGTTGGCCTTGAT TGTGGCTCAGCATCGTGATCGTTCCAATGTCCTGTCTGGCATTAAGATGGCAGCCCTAGAAGAGGGCCTGAAGAAGATATTTTTAGCAGC AAAAAAGAAGAAAGCAAGTGTTCATCTTCCACGTATTGGACATGCCACGAAAGGTTTTAACTGGTATGGTACTGAGCGACTTATTCGGAA ACATCTGGCTGCAAGAGGCATCCCAACTTACATATATTATTTTCCTAGAAGCAAGTCTGCTGTCCTTCATGCACAGTCTTCATCTTCCTC CTCAAGACAGCTGGTGCCTTAAGAATTGGCCCAGCCTCAGATCCTGTCTTTAGCAACCAGCTAATATTTACCCAGAGGTACTGCAATAGA GTATTTCAAAATGGAATCAGGATCTGGTGGGCCTCAGAAATTGTCTCTTTTCTGAGTTTCAATTTGGTTCTCCTGGATGTTTTGCTCTGT TTTGGTACCTGTAATATAGGGAAACACAACTTTTTTTGGGAAAGCCCTTTGACCCCAGCTTGCTAGTTGCATAATAATAAATTTTCTGTT >71387_71387_1_RAB3IP-CHD1L_RAB3IP_chr12_70150443_ENST00000247833_CHD1L_chr1_146736080_ENST00000431239_length(amino acids)=801AA_BP=190 MSAGSGRGGFFRLSYDEAFAMANDPLEGFHEVNLASPTSPDLLGVYESGTQEQTTSPSVIYRPHPSALSSVPIQANALDVSELPTQPVYS SPRRLNCAEISSISFHVTDPAPCSTSGVTAGLTKLTTRKDNYNAEREFLQGATITEACDGSDDIFGLSTDSLSRLRSPSVLEVREKGYER LKEELAKAQRFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKAEVATELPK KTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAH RIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETK DGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLS PEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEPEDLENGEESSAELDYQDPDATSLKYVSGDVTH PQAGAEDALIVHCVDDSGHWGRGGLFTALEKRSAEPRKIYELAGKMKDLSLGGVLLFPVDDKESRNKGQDLLALIVAQHRDRSNVLSGIK -------------------------------------------------------------- >71387_71387_2_RAB3IP-CHD1L_RAB3IP_chr12_70150443_ENST00000362025_CHD1L_chr1_146736080_ENST00000431239_length(transcript)=3092nt_BP=1005nt GGTTACCTGGCGGCGGGCGGGCGCGGCCGGGAGCGGAGGGCCGCGGTCGCGAAGAGGATGAAGAGAGAGTTCCCGAACAAGTCGGAAGCA GCTCACAACACCGGACGCCGCGCGGCAGGGCTGTGGACCTGGGGTGGTTTCGTGTCCCAGTCTTAGGAAACTACGCGCGAGGCACCGTGC TGAGGCGTAGAGGTCACCCTCGGGAGGTTTCGGTGAAACCTGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCT CCGTGCCGCCAGACTTGTGTTCGGGGGAGTTGAGACGAACTGCACGGGTGGGATTGCATGGCTCTGCCCTCCCAGCGTTGACAACTCGCC CCGACCGCCCAGGAAGCGCGAGCTTACTGGCTCCAGAAGTGATGATGCTGGGTGGAAGTCGCAGCATGTGAAGAGTTGCCGGTTGTTATG GGATTAAAAAAGATGAAAGGGTTATCTTATGATGAGGCTTTTGCTATGGCTAATGATCCCTTGGAAGGCTTCCATGAAGTAAACCTTGCT TCACCTACTTCTCCGGACCTTCTTGGTGTGTATGAATCAGGAACTCAAGAGCAGACTACCTCACCAAGTGTCATCTACCGGCCACACCCT TCAGCTTTATCCTCTGTACCTATCCAGGCAAATGCATTAGATGTTTCTGAACTTCCTACACAACCCGTGTATTCATCCCCCAGACGTTTA AATTGTGCGGAAATATCTAGTATCAGCTTTCATGTTACAGACCCAGCCCCTTGCTCTACCTCTGGAGTCACAGCTGGATTAACTAAATTA ACTACAAGAAAGGACAACTATAATGCAGAGAGAGAGTTTTTACAGGGTGCTACTATAACAGAGGCTTGCGATGGCAGTGATGATATTTTT GGGTTGAGTACTGATAGTCTGTCTCGTTTACGAAGCCCATCTGTTTTGGAAGTTAGAGAAAAGGGCTATGAACGATTAAAAGAAGAACTC GCAAAAGCTCAGAGGTTCTCAGTAGTCTTCAGTCTCCTGTTGACCGGAACTCCCATCCAGAACAGCCTCCAAGAGCTCTACTCCCTCCTC AGTTTTGTGGAGCCTGATCTCTTTTCCAAGGAAGAGGTGGGAGATTTTATTCAACGCTACCAGGATATTGAGAAAGAATCTGAGTCAGCA AGTGAACTGCACAAACTCTTGCAGCCATTTCTGCTGAGGCGAGTGAAAGCTGAGGTAGCTACAGAGCTTCCCAAGAAGACAGAAGTAGTG ATATACCATGGCATGTCAGCATTGCAGAAGAAATACTACAAGGCCATTTTGATGAAAGACCTAGATGCATTTGAAAATGAGACGGCAAAG AAAGTTAAACTACAGAACATTTTGTCCCAGCTTCGAAAGTGTGTGGATCACCCATATTTGTTTGATGGTGGAGTTGGCATGAACTTAACA GCAGCAGATACTGTGATTTTTGTTGACAGTGACTTTAATCCTCAGAATGACTTGCAAGCAGCTGCCAGGGCTCATCGCATTGGCCAAAAC AAGTCTGTTAAAGTTATTCGGCTGATTGGTCGAGACACTGTGGAAGAAATAGTCTATAGGAAAGCAGCCTCCAAACTGCAGCTCACCAAC ATGATCATAGAAGGAGGCCATTTTACTCTGGGAGCCCAGAAACCCGCTGCCGATGCTGACCTCCAGTTGAGTGAGATACTCAAATTTGGT TTGGATAAACTGCTGGCCTCTGAGGGGAGCACCATGGATGAAATAGACCTGGAGTCCATACTGGGAGAAACAAAAGATGGCCAGTGGGTC TCTGATGCCTTGCCTGCAGCAGAAGGAGGGAGCAGAGATCAAGAGGAAGGAAAAAATCATATGTACTTATTTGAAGGTAAAGATTATTCT AAAGAGCCCAGTAAGGAAGACAGAAAATCATTTGAACAACTGGTAAACCTTCAGAAAACCCTTTTGGAGAAAGCTAGTCAAGAGGGCCGA TCACTCCGAAATAAAGGCAGTGTTCTCATCCCAGGCCTTGTGGAGGGATCTACCAAAAGGAAGCGGGTTCTGAGTCCAGAAGAGCTGGAG GACAGACAGAAGAAAAGACAAGAAGCAGCTGCCAAGAGAAGGAGACTCATAGAGGAGAAGAAGAGGCAAAAGGAAGAGGCTGAACATAAG AAAAAGATGGCCTGGTGGGAATCCAACAATTACCAGTCCTTCTGCCTGCCCTCTGAGGAGAGCGAGCCAGAGGACCTTGAGAATGGGGAA GAGAGCTCTGCTGAGCTGGATTACCAAGACCCAGATGCTACTTCCCTCAAGTACGTTAGTGGTGATGTCACCCACCCTCAGGCTGGGGCC GAGGATGCTCTCATTGTGCACTGCGTAGATGACTCTGGCCACTGGGGCAGAGGTGGTTTATTTACAGCTCTGGAAAAGCGATCCGCTGAG CCAAGAAAAATATATGAGCTGGCTGGGAAAATGAAAGACCTGAGTTTGGGAGGTGTCCTTTTATTTCCTGTTGATGATAAAGAATCAAGA AACAAAGGGCAAGATTTGTTGGCCTTGATTGTGGCTCAGCATCGTGATCGTTCCAATGTCCTGTCTGGCATTAAGATGGCAGCCCTAGAA GAGGGCCTGAAGAAGATATTTTTAGCAGCAAAAAAGAAGAAAGCAAGTGTTCATCTTCCACGTATTGGACATGCCACGAAAGGTTTTAAC TGGTATGGTACTGAGCGACTTATTCGGAAACATCTGGCTGCAAGAGGCATCCCAACTTACATATATTATTTTCCTAGAAGCAAGTCTGCT GTCCTTCATGCACAGTCTTCATCTTCCTCCTCAAGACAGCTGGTGCCTTAAGAATTGGCCCAGCCTCAGATCCTGTCTTTAGCAACCAGC TAATATTTACCCAGAGGTACTGCAATAGAGTATTTCAAAATGGAATCAGGATCTGGTGGGCCTCAGAAATTGTCTCTTTTCTGAGTTTCA ATTTGGTTCTCCTGGATGTTTTGCTCTGTTTTGGTACCTGTAATATAGGGAAACACAACTTTTTTTGGGAAAGCCCTTTGACCCCAGCTT >71387_71387_2_RAB3IP-CHD1L_RAB3IP_chr12_70150443_ENST00000362025_CHD1L_chr1_146736080_ENST00000431239_length(amino acids)=801AA_BP=190 MPVVMGLKKMKGLSYDEAFAMANDPLEGFHEVNLASPTSPDLLGVYESGTQEQTTSPSVIYRPHPSALSSVPIQANALDVSELPTQPVYS SPRRLNCAEISSISFHVTDPAPCSTSGVTAGLTKLTTRKDNYNAEREFLQGATITEACDGSDDIFGLSTDSLSRLRSPSVLEVREKGYER LKEELAKAQRFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKAEVATELPK KTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAH RIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETK DGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLS PEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEPEDLENGEESSAELDYQDPDATSLKYVSGDVTH PQAGAEDALIVHCVDDSGHWGRGGLFTALEKRSAEPRKIYELAGKMKDLSLGGVLLFPVDDKESRNKGQDLLALIVAQHRDRSNVLSGIK -------------------------------------------------------------- >71387_71387_3_RAB3IP-CHD1L_RAB3IP_chr12_70150443_ENST00000378815_CHD1L_chr1_146736080_ENST00000431239_length(transcript)=2792nt_BP=705nt AGGCGCAGTCCCGCGTTCCCTCGGCGGCTGCCGGCGTAGTGAGCCCGCCGCCGTGGAGTGTAGCGGAAAGGGCTCGCCGTCCTCCTCCGT TTCTCGCTGCTTCGGGACGCGCTCTCTGCGGCTCTGTGAGCGCCCCTGAGCGCCGGCAGCGGCCGCGGTGGGTTCTTCAGGTTATCTTAT GATGAGGCTTTTGCTATGGCTAATGATCCCTTGGAAGGCTTCCATGAAGTAAACCTTGCTTCACCTACTTCTCCGGACCTTCTTGGTGTG TATGAATCAGGAACTCAAGAGCAGACTACCTCACCAAGTGTCATCTACCGGCCACACCCTTCAGCTTTATCCTCTGTACCTATCCAGGCA AATGCATTAGATGTTTCTGAACTTCCTACACAACCCGTGTATTCATCCCCCAGACGTTTAAATTGTGCGGAAATATCTAGTATCAGCTTT CATGTTACAGACCCAGCCCCTTGCTCTACCTCTGGAGTCACAGCTGGATTAACTAAATTAACTACAAGAAAGGACAACTATAATGCAGAG AGAGAGTTTTTACAGGGTGCTACTATAACAGAGGCTTGCGATGGCAGTGATGATATTTTTGGGTTGAGTACTGATAGTCTGTCTCGTTTA CGAAGCCCATCTGTTTTGGAAGTTAGAGAAAAGGGCTATGAACGATTAAAAGAAGAACTCGCAAAAGCTCAGAGGTTCTCAGTAGTCTTC AGTCTCCTGTTGACCGGAACTCCCATCCAGAACAGCCTCCAAGAGCTCTACTCCCTCCTCAGTTTTGTGGAGCCTGATCTCTTTTCCAAG GAAGAGGTGGGAGATTTTATTCAACGCTACCAGGATATTGAGAAAGAATCTGAGTCAGCAAGTGAACTGCACAAACTCTTGCAGCCATTT CTGCTGAGGCGAGTGAAAGCTGAGGTAGCTACAGAGCTTCCCAAGAAGACAGAAGTAGTGATATACCATGGCATGTCAGCATTGCAGAAG AAATACTACAAGGCCATTTTGATGAAAGACCTAGATGCATTTGAAAATGAGACGGCAAAGAAAGTTAAACTACAGAACATTTTGTCCCAG CTTCGAAAGTGTGTGGATCACCCATATTTGTTTGATGGTGGAGTTGGCATGAACTTAACAGCAGCAGATACTGTGATTTTTGTTGACAGT GACTTTAATCCTCAGAATGACTTGCAAGCAGCTGCCAGGGCTCATCGCATTGGCCAAAACAAGTCTGTTAAAGTTATTCGGCTGATTGGT CGAGACACTGTGGAAGAAATAGTCTATAGGAAAGCAGCCTCCAAACTGCAGCTCACCAACATGATCATAGAAGGAGGCCATTTTACTCTG GGAGCCCAGAAACCCGCTGCCGATGCTGACCTCCAGTTGAGTGAGATACTCAAATTTGGTTTGGATAAACTGCTGGCCTCTGAGGGGAGC ACCATGGATGAAATAGACCTGGAGTCCATACTGGGAGAAACAAAAGATGGCCAGTGGGTCTCTGATGCCTTGCCTGCAGCAGAAGGAGGG AGCAGAGATCAAGAGGAAGGAAAAAATCATATGTACTTATTTGAAGGTAAAGATTATTCTAAAGAGCCCAGTAAGGAAGACAGAAAATCA TTTGAACAACTGGTAAACCTTCAGAAAACCCTTTTGGAGAAAGCTAGTCAAGAGGGCCGATCACTCCGAAATAAAGGCAGTGTTCTCATC CCAGGCCTTGTGGAGGGATCTACCAAAAGGAAGCGGGTTCTGAGTCCAGAAGAGCTGGAGGACAGACAGAAGAAAAGACAAGAAGCAGCT GCCAAGAGAAGGAGACTCATAGAGGAGAAGAAGAGGCAAAAGGAAGAGGCTGAACATAAGAAAAAGATGGCCTGGTGGGAATCCAACAAT TACCAGTCCTTCTGCCTGCCCTCTGAGGAGAGCGAGCCAGAGGACCTTGAGAATGGGGAAGAGAGCTCTGCTGAGCTGGATTACCAAGAC CCAGATGCTACTTCCCTCAAGTACGTTAGTGGTGATGTCACCCACCCTCAGGCTGGGGCCGAGGATGCTCTCATTGTGCACTGCGTAGAT GACTCTGGCCACTGGGGCAGAGGTGGTTTATTTACAGCTCTGGAAAAGCGATCCGCTGAGCCAAGAAAAATATATGAGCTGGCTGGGAAA ATGAAAGACCTGAGTTTGGGAGGTGTCCTTTTATTTCCTGTTGATGATAAAGAATCAAGAAACAAAGGGCAAGATTTGTTGGCCTTGATT GTGGCTCAGCATCGTGATCGTTCCAATGTCCTGTCTGGCATTAAGATGGCAGCCCTAGAAGAGGGCCTGAAGAAGATATTTTTAGCAGCA AAAAAGAAGAAAGCAAGTGTTCATCTTCCACGTATTGGACATGCCACGAAAGGTTTTAACTGGTATGGTACTGAGCGACTTATTCGGAAA CATCTGGCTGCAAGAGGCATCCCAACTTACATATATTATTTTCCTAGAAGCAAGTCTGCTGTCCTTCATGCACAGTCTTCATCTTCCTCC TCAAGACAGCTGGTGCCTTAAGAATTGGCCCAGCCTCAGATCCTGTCTTTAGCAACCAGCTAATATTTACCCAGAGGTACTGCAATAGAG TATTTCAAAATGGAATCAGGATCTGGTGGGCCTCAGAAATTGTCTCTTTTCTGAGTTTCAATTTGGTTCTCCTGGATGTTTTGCTCTGTT TTGGTACCTGTAATATAGGGAAACACAACTTTTTTTGGGAAAGCCCTTTGACCCCAGCTTGCTAGTTGCATAATAATAAATTTTCTGTTC >71387_71387_3_RAB3IP-CHD1L_RAB3IP_chr12_70150443_ENST00000378815_CHD1L_chr1_146736080_ENST00000431239_length(amino acids)=801AA_BP=190 MSAGSGRGGFFRLSYDEAFAMANDPLEGFHEVNLASPTSPDLLGVYESGTQEQTTSPSVIYRPHPSALSSVPIQANALDVSELPTQPVYS SPRRLNCAEISSISFHVTDPAPCSTSGVTAGLTKLTTRKDNYNAEREFLQGATITEACDGSDDIFGLSTDSLSRLRSPSVLEVREKGYER LKEELAKAQRFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKAEVATELPK KTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAH RIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETK DGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLS PEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEPEDLENGEESSAELDYQDPDATSLKYVSGDVTH PQAGAEDALIVHCVDDSGHWGRGGLFTALEKRSAEPRKIYELAGKMKDLSLGGVLLFPVDDKESRNKGQDLLALIVAQHRDRSNVLSGIK -------------------------------------------------------------- >71387_71387_4_RAB3IP-CHD1L_RAB3IP_chr12_70150443_ENST00000483530_CHD1L_chr1_146736080_ENST00000431239_length(transcript)=2792nt_BP=705nt AGGCGCAGTCCCGCGTTCCCTCGGCGGCTGCCGGCGTAGTGAGCCCGCCGCCGTGGAGTGTAGCGGAAAGGGCTCGCCGTCCTCCTCCGT TTCTCGCTGCTTCGGGACGCGCTCTCTGCGGCTCTGTGAGCGCCCCTGAGCGCCGGCAGCGGCCGCGGTGGGTTCTTCAGGTTATCTTAT GATGAGGCTTTTGCTATGGCTAATGATCCCTTGGAAGGCTTCCATGAAGTAAACCTTGCTTCACCTACTTCTCCGGACCTTCTTGGTGTG TATGAATCAGGAACTCAAGAGCAGACTACCTCACCAAGTGTCATCTACCGGCCACACCCTTCAGCTTTATCCTCTGTACCTATCCAGGCA AATGCATTAGATGTTTCTGAACTTCCTACACAACCCGTGTATTCATCCCCCAGACGTTTAAATTGTGCGGAAATATCTAGTATCAGCTTT CATGTTACAGACCCAGCCCCTTGCTCTACCTCTGGAGTCACAGCTGGATTAACTAAATTAACTACAAGAAAGGACAACTATAATGCAGAG AGAGAGTTTTTACAGGGTGCTACTATAACAGAGGCTTGCGATGGCAGTGATGATATTTTTGGGTTGAGTACTGATAGTCTGTCTCGTTTA CGAAGCCCATCTGTTTTGGAAGTTAGAGAAAAGGGCTATGAACGATTAAAAGAAGAACTCGCAAAAGCTCAGAGGTTCTCAGTAGTCTTC AGTCTCCTGTTGACCGGAACTCCCATCCAGAACAGCCTCCAAGAGCTCTACTCCCTCCTCAGTTTTGTGGAGCCTGATCTCTTTTCCAAG GAAGAGGTGGGAGATTTTATTCAACGCTACCAGGATATTGAGAAAGAATCTGAGTCAGCAAGTGAACTGCACAAACTCTTGCAGCCATTT CTGCTGAGGCGAGTGAAAGCTGAGGTAGCTACAGAGCTTCCCAAGAAGACAGAAGTAGTGATATACCATGGCATGTCAGCATTGCAGAAG AAATACTACAAGGCCATTTTGATGAAAGACCTAGATGCATTTGAAAATGAGACGGCAAAGAAAGTTAAACTACAGAACATTTTGTCCCAG CTTCGAAAGTGTGTGGATCACCCATATTTGTTTGATGGTGGAGTTGGCATGAACTTAACAGCAGCAGATACTGTGATTTTTGTTGACAGT GACTTTAATCCTCAGAATGACTTGCAAGCAGCTGCCAGGGCTCATCGCATTGGCCAAAACAAGTCTGTTAAAGTTATTCGGCTGATTGGT CGAGACACTGTGGAAGAAATAGTCTATAGGAAAGCAGCCTCCAAACTGCAGCTCACCAACATGATCATAGAAGGAGGCCATTTTACTCTG GGAGCCCAGAAACCCGCTGCCGATGCTGACCTCCAGTTGAGTGAGATACTCAAATTTGGTTTGGATAAACTGCTGGCCTCTGAGGGGAGC ACCATGGATGAAATAGACCTGGAGTCCATACTGGGAGAAACAAAAGATGGCCAGTGGGTCTCTGATGCCTTGCCTGCAGCAGAAGGAGGG AGCAGAGATCAAGAGGAAGGAAAAAATCATATGTACTTATTTGAAGGTAAAGATTATTCTAAAGAGCCCAGTAAGGAAGACAGAAAATCA TTTGAACAACTGGTAAACCTTCAGAAAACCCTTTTGGAGAAAGCTAGTCAAGAGGGCCGATCACTCCGAAATAAAGGCAGTGTTCTCATC CCAGGCCTTGTGGAGGGATCTACCAAAAGGAAGCGGGTTCTGAGTCCAGAAGAGCTGGAGGACAGACAGAAGAAAAGACAAGAAGCAGCT GCCAAGAGAAGGAGACTCATAGAGGAGAAGAAGAGGCAAAAGGAAGAGGCTGAACATAAGAAAAAGATGGCCTGGTGGGAATCCAACAAT TACCAGTCCTTCTGCCTGCCCTCTGAGGAGAGCGAGCCAGAGGACCTTGAGAATGGGGAAGAGAGCTCTGCTGAGCTGGATTACCAAGAC CCAGATGCTACTTCCCTCAAGTACGTTAGTGGTGATGTCACCCACCCTCAGGCTGGGGCCGAGGATGCTCTCATTGTGCACTGCGTAGAT GACTCTGGCCACTGGGGCAGAGGTGGTTTATTTACAGCTCTGGAAAAGCGATCCGCTGAGCCAAGAAAAATATATGAGCTGGCTGGGAAA ATGAAAGACCTGAGTTTGGGAGGTGTCCTTTTATTTCCTGTTGATGATAAAGAATCAAGAAACAAAGGGCAAGATTTGTTGGCCTTGATT GTGGCTCAGCATCGTGATCGTTCCAATGTCCTGTCTGGCATTAAGATGGCAGCCCTAGAAGAGGGCCTGAAGAAGATATTTTTAGCAGCA AAAAAGAAGAAAGCAAGTGTTCATCTTCCACGTATTGGACATGCCACGAAAGGTTTTAACTGGTATGGTACTGAGCGACTTATTCGGAAA CATCTGGCTGCAAGAGGCATCCCAACTTACATATATTATTTTCCTAGAAGCAAGTCTGCTGTCCTTCATGCACAGTCTTCATCTTCCTCC TCAAGACAGCTGGTGCCTTAAGAATTGGCCCAGCCTCAGATCCTGTCTTTAGCAACCAGCTAATATTTACCCAGAGGTACTGCAATAGAG TATTTCAAAATGGAATCAGGATCTGGTGGGCCTCAGAAATTGTCTCTTTTCTGAGTTTCAATTTGGTTCTCCTGGATGTTTTGCTCTGTT TTGGTACCTGTAATATAGGGAAACACAACTTTTTTTGGGAAAGCCCTTTGACCCCAGCTTGCTAGTTGCATAATAATAAATTTTCTGTTC >71387_71387_4_RAB3IP-CHD1L_RAB3IP_chr12_70150443_ENST00000483530_CHD1L_chr1_146736080_ENST00000431239_length(amino acids)=801AA_BP=190 MSAGSGRGGFFRLSYDEAFAMANDPLEGFHEVNLASPTSPDLLGVYESGTQEQTTSPSVIYRPHPSALSSVPIQANALDVSELPTQPVYS SPRRLNCAEISSISFHVTDPAPCSTSGVTAGLTKLTTRKDNYNAEREFLQGATITEACDGSDDIFGLSTDSLSRLRSPSVLEVREKGYER LKEELAKAQRFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKAEVATELPK KTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAH RIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETK DGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLS PEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEPEDLENGEESSAELDYQDPDATSLKYVSGDVTH PQAGAEDALIVHCVDDSGHWGRGGLFTALEKRSAEPRKIYELAGKMKDLSLGGVLLFPVDDKESRNKGQDLLALIVAQHRDRSNVLSGIK -------------------------------------------------------------- >71387_71387_5_RAB3IP-CHD1L_RAB3IP_chr12_70150443_ENST00000550536_CHD1L_chr1_146736080_ENST00000431239_length(transcript)=3102nt_BP=1015nt GAGTCCAGCGGGTTACCTGGCGGCGGGCGGGCGCGGCCGGGAGCGGAGGGCCGCGGTCGCGAAGAGGATGAAGAGAGAGTTCCCGAACAA GTCGGAAGCAGCTCACAACACCGGACGCCGCGCGGCAGGGCTGTGGACCTGGGGTGGTTTCGTGTCCCAGTCTTAGGAAACTACGCGCGA GGCACCGTGCTGAGGCGTAGAGGTCACCCTCGGGAGGTTTCGGTGAAACCTGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCGCGCCCAA GTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGGGAGTTGAGACGAACTGCACGGGTGGGATTGCATGGCTCTGCCCTCCCAGCGTTG ACAACTCGCCCCGACCGCCCAGGAAGCGCGAGCTTACTGGCTCCAGAAGTGATGATGCTGGGTGGAAGTCGCAGCATGTGAAGAGTTGCC GGTTGTTATGGGATTAAAAAAGATGAAAGGGTTATCTTATGATGAGGCTTTTGCTATGGCTAATGATCCCTTGGAAGGCTTCCATGAAGT AAACCTTGCTTCACCTACTTCTCCGGACCTTCTTGGTGTGTATGAATCAGGAACTCAAGAGCAGACTACCTCACCAAGTGTCATCTACCG GCCACACCCTTCAGCTTTATCCTCTGTACCTATCCAGGCAAATGCATTAGATGTTTCTGAACTTCCTACACAACCCGTGTATTCATCCCC CAGACGTTTAAATTGTGCGGAAATATCTAGTATCAGCTTTCATGTTACAGACCCAGCCCCTTGCTCTACCTCTGGAGTCACAGCTGGATT AACTAAATTAACTACAAGAAAGGACAACTATAATGCAGAGAGAGAGTTTTTACAGGGTGCTACTATAACAGAGGCTTGCGATGGCAGTGA TGATATTTTTGGGTTGAGTACTGATAGTCTGTCTCGTTTACGAAGCCCATCTGTTTTGGAAGTTAGAGAAAAGGGCTATGAACGATTAAA AGAAGAACTCGCAAAAGCTCAGAGGTTCTCAGTAGTCTTCAGTCTCCTGTTGACCGGAACTCCCATCCAGAACAGCCTCCAAGAGCTCTA CTCCCTCCTCAGTTTTGTGGAGCCTGATCTCTTTTCCAAGGAAGAGGTGGGAGATTTTATTCAACGCTACCAGGATATTGAGAAAGAATC TGAGTCAGCAAGTGAACTGCACAAACTCTTGCAGCCATTTCTGCTGAGGCGAGTGAAAGCTGAGGTAGCTACAGAGCTTCCCAAGAAGAC AGAAGTAGTGATATACCATGGCATGTCAGCATTGCAGAAGAAATACTACAAGGCCATTTTGATGAAAGACCTAGATGCATTTGAAAATGA GACGGCAAAGAAAGTTAAACTACAGAACATTTTGTCCCAGCTTCGAAAGTGTGTGGATCACCCATATTTGTTTGATGGTGGAGTTGGCAT GAACTTAACAGCAGCAGATACTGTGATTTTTGTTGACAGTGACTTTAATCCTCAGAATGACTTGCAAGCAGCTGCCAGGGCTCATCGCAT TGGCCAAAACAAGTCTGTTAAAGTTATTCGGCTGATTGGTCGAGACACTGTGGAAGAAATAGTCTATAGGAAAGCAGCCTCCAAACTGCA GCTCACCAACATGATCATAGAAGGAGGCCATTTTACTCTGGGAGCCCAGAAACCCGCTGCCGATGCTGACCTCCAGTTGAGTGAGATACT CAAATTTGGTTTGGATAAACTGCTGGCCTCTGAGGGGAGCACCATGGATGAAATAGACCTGGAGTCCATACTGGGAGAAACAAAAGATGG CCAGTGGGTCTCTGATGCCTTGCCTGCAGCAGAAGGAGGGAGCAGAGATCAAGAGGAAGGAAAAAATCATATGTACTTATTTGAAGGTAA AGATTATTCTAAAGAGCCCAGTAAGGAAGACAGAAAATCATTTGAACAACTGGTAAACCTTCAGAAAACCCTTTTGGAGAAAGCTAGTCA AGAGGGCCGATCACTCCGAAATAAAGGCAGTGTTCTCATCCCAGGCCTTGTGGAGGGATCTACCAAAAGGAAGCGGGTTCTGAGTCCAGA AGAGCTGGAGGACAGACAGAAGAAAAGACAAGAAGCAGCTGCCAAGAGAAGGAGACTCATAGAGGAGAAGAAGAGGCAAAAGGAAGAGGC TGAACATAAGAAAAAGATGGCCTGGTGGGAATCCAACAATTACCAGTCCTTCTGCCTGCCCTCTGAGGAGAGCGAGCCAGAGGACCTTGA GAATGGGGAAGAGAGCTCTGCTGAGCTGGATTACCAAGACCCAGATGCTACTTCCCTCAAGTACGTTAGTGGTGATGTCACCCACCCTCA GGCTGGGGCCGAGGATGCTCTCATTGTGCACTGCGTAGATGACTCTGGCCACTGGGGCAGAGGTGGTTTATTTACAGCTCTGGAAAAGCG ATCCGCTGAGCCAAGAAAAATATATGAGCTGGCTGGGAAAATGAAAGACCTGAGTTTGGGAGGTGTCCTTTTATTTCCTGTTGATGATAA AGAATCAAGAAACAAAGGGCAAGATTTGTTGGCCTTGATTGTGGCTCAGCATCGTGATCGTTCCAATGTCCTGTCTGGCATTAAGATGGC AGCCCTAGAAGAGGGCCTGAAGAAGATATTTTTAGCAGCAAAAAAGAAGAAAGCAAGTGTTCATCTTCCACGTATTGGACATGCCACGAA AGGTTTTAACTGGTATGGTACTGAGCGACTTATTCGGAAACATCTGGCTGCAAGAGGCATCCCAACTTACATATATTATTTTCCTAGAAG CAAGTCTGCTGTCCTTCATGCACAGTCTTCATCTTCCTCCTCAAGACAGCTGGTGCCTTAAGAATTGGCCCAGCCTCAGATCCTGTCTTT AGCAACCAGCTAATATTTACCCAGAGGTACTGCAATAGAGTATTTCAAAATGGAATCAGGATCTGGTGGGCCTCAGAAATTGTCTCTTTT CTGAGTTTCAATTTGGTTCTCCTGGATGTTTTGCTCTGTTTTGGTACCTGTAATATAGGGAAACACAACTTTTTTTGGGAAAGCCCTTTG >71387_71387_5_RAB3IP-CHD1L_RAB3IP_chr12_70150443_ENST00000550536_CHD1L_chr1_146736080_ENST00000431239_length(amino acids)=801AA_BP=190 MPVVMGLKKMKGLSYDEAFAMANDPLEGFHEVNLASPTSPDLLGVYESGTQEQTTSPSVIYRPHPSALSSVPIQANALDVSELPTQPVYS SPRRLNCAEISSISFHVTDPAPCSTSGVTAGLTKLTTRKDNYNAEREFLQGATITEACDGSDDIFGLSTDSLSRLRSPSVLEVREKGYER LKEELAKAQRFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKAEVATELPK KTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAH RIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETK DGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLS PEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEPEDLENGEESSAELDYQDPDATSLKYVSGDVTH PQAGAEDALIVHCVDDSGHWGRGGLFTALEKRSAEPRKIYELAGKMKDLSLGGVLLFPVDDKESRNKGQDLLALIVAQHRDRSNVLSGIK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for RAB3IP-CHD1L |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for RAB3IP-CHD1L |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for RAB3IP-CHD1L |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | C1968949 | Cakut | 2 | CLINGEN;GENOMICS_ENGLAND | |
Tgene | C0013146 | Drug abuse | 1 | CTD_human | |
Tgene | C0013170 | Drug habituation | 1 | CTD_human | |
Tgene | C0013222 | Drug Use Disorders | 1 | CTD_human | |
Tgene | C0029231 | Organic Mental Disorders, Substance-Induced | 1 | CTD_human | |
Tgene | C0038580 | Substance Dependence | 1 | CTD_human | |
Tgene | C0038586 | Substance Use Disorders | 1 | CTD_human | |
Tgene | C0236969 | Substance-Related Disorders | 1 | CTD_human | |
Tgene | C0740858 | Substance abuse problem | 1 | CTD_human | |
Tgene | C1510472 | Drug Dependence | 1 | CTD_human | |
Tgene | C4316881 | Prescription Drug Abuse | 1 | CTD_human |