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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:CPT1A-LPCAT2 (FusionGDB2 ID:HG1374TG54947) |
Fusion Gene Summary for CPT1A-LPCAT2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: CPT1A-LPCAT2 | Fusion gene ID: hg1374tg54947 | Hgene | Tgene | Gene symbol | CPT1A | LPCAT2 | Gene ID | 1374 | 54947 |
Gene name | carnitine palmitoyltransferase 1A | lysophosphatidylcholine acyltransferase 2 | |
Synonyms | CPT1|CPT1-L|L-CPT1 | AGPAT11|AYTL1|LysoPAFAT | |
Cytomap | ('CPT1A')('LPCAT2') 11q13.3 | 16q12.2 | |
Type of gene | protein-coding | protein-coding | |
Description | carnitine O-palmitoyltransferase 1, liver isoformCPT ICPTI-Lcarnitine O-palmitoyltransferase I, liver isoformcarnitine palmitoyltransferase 1A (liver)carnitine palmitoyltransferase I, liver | lysophosphatidylcholine acyltransferase 21-AGP acyltransferase 111-AGPAT 111-acylglycerol-3-phosphate O-acyltransferase 111-acylglycerophosphocholine O-acyltransferase1-alkylglycerophosphocholine O-acetyltransferaseLPAAT-alphaLPC acyltransferase 2 | |
Modification date | 20200315 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000265641, ENST00000376618, ENST00000539743, ENST00000540367, ENST00000537756, ENST00000538994, | ||
Fusion gene scores | * DoF score | 25 X 23 X 12=6900 | 6 X 9 X 4=216 |
# samples | 32 | 9 | |
** MAII score | log2(32/6900*10)=-4.43045255166553 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(9/216*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CPT1A [Title/Abstract] AND LPCAT2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CPT1A(68529003)-LPCAT2(55583189), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | CPT1A-LPCAT2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CPT1A-LPCAT2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CPT1A-LPCAT2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CPT1A-LPCAT2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CPT1A-LPCAT2 seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF. CPT1A-LPCAT2 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. CPT1A-LPCAT2 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | CPT1A | GO:0001676 | long-chain fatty acid metabolic process | 11350182 |
Hgene | CPT1A | GO:0009437 | carnitine metabolic process | 11350182 |
Tgene | LPCAT2 | GO:0036151 | phosphatidylcholine acyl-chain remodeling | 21498505 |
Fusion gene breakpoints across CPT1A (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across LPCAT2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-E2-A150-01A | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
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Fusion Gene ORF analysis for CPT1A-LPCAT2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000265641 | ENST00000565056 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
5CDS-intron | ENST00000376618 | ENST00000565056 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
5CDS-intron | ENST00000539743 | ENST00000565056 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
5CDS-intron | ENST00000540367 | ENST00000565056 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
Frame-shift | ENST00000539743 | ENST00000262134 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
Frame-shift | ENST00000540367 | ENST00000262134 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
In-frame | ENST00000265641 | ENST00000262134 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
In-frame | ENST00000376618 | ENST00000262134 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
intron-3CDS | ENST00000537756 | ENST00000262134 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
intron-3CDS | ENST00000538994 | ENST00000262134 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
intron-intron | ENST00000537756 | ENST00000565056 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
intron-intron | ENST00000538994 | ENST00000565056 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000376618 | CPT1A | chr11 | 68529003 | - | ENST00000262134 | LPCAT2 | chr16 | 55583189 | + | 6470 | 2198 | 149 | 2233 | 694 |
ENST00000265641 | CPT1A | chr11 | 68529003 | - | ENST00000262134 | LPCAT2 | chr16 | 55583189 | + | 6455 | 2183 | 134 | 2218 | 694 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000376618 | ENST00000262134 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + | 0.000242506 | 0.99975747 |
ENST00000265641 | ENST00000262134 | CPT1A | chr11 | 68529003 | - | LPCAT2 | chr16 | 55583189 | + | 0.000239855 | 0.9997601 |
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Fusion Genomic Features for CPT1A-LPCAT2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
CPT1A | chr11 | 68529002 | - | LPCAT2 | chr16 | 55583188 | + | 0.006241785 | 0.9937582 |
CPT1A | chr11 | 68529002 | - | LPCAT2 | chr16 | 55583188 | + | 0.006241785 | 0.9937582 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for CPT1A-LPCAT2 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr11:68529003/chr16:55583189) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000265641 | - | 16 | 19 | 555_567 | 676 | 774.0 | Region | Coenzyme A binding |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000376618 | - | 16 | 19 | 555_567 | 676 | 757.0 | Region | Coenzyme A binding |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000539743 | - | 15 | 18 | 555_567 | 676 | 774.0 | Region | Coenzyme A binding |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000540367 | - | 15 | 18 | 555_567 | 676 | 757.0 | Region | Coenzyme A binding |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000265641 | - | 16 | 19 | 2_47 | 676 | 774.0 | Topological domain | Cytoplasmic |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000265641 | - | 16 | 19 | 74_102 | 676 | 774.0 | Topological domain | Mitochondrial intermembrane |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000376618 | - | 16 | 19 | 2_47 | 676 | 757.0 | Topological domain | Cytoplasmic |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000376618 | - | 16 | 19 | 74_102 | 676 | 757.0 | Topological domain | Mitochondrial intermembrane |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000539743 | - | 15 | 18 | 2_47 | 676 | 774.0 | Topological domain | Cytoplasmic |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000539743 | - | 15 | 18 | 74_102 | 676 | 774.0 | Topological domain | Mitochondrial intermembrane |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000540367 | - | 15 | 18 | 2_47 | 676 | 757.0 | Topological domain | Cytoplasmic |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000540367 | - | 15 | 18 | 74_102 | 676 | 757.0 | Topological domain | Mitochondrial intermembrane |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000265641 | - | 16 | 19 | 103_122 | 676 | 774.0 | Transmembrane | Helical |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000265641 | - | 16 | 19 | 48_73 | 676 | 774.0 | Transmembrane | Helical |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000376618 | - | 16 | 19 | 103_122 | 676 | 757.0 | Transmembrane | Helical |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000376618 | - | 16 | 19 | 48_73 | 676 | 757.0 | Transmembrane | Helical |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000539743 | - | 15 | 18 | 103_122 | 676 | 774.0 | Transmembrane | Helical |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000539743 | - | 15 | 18 | 48_73 | 676 | 774.0 | Transmembrane | Helical |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000540367 | - | 15 | 18 | 103_122 | 676 | 757.0 | Transmembrane | Helical |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000540367 | - | 15 | 18 | 48_73 | 676 | 757.0 | Transmembrane | Helical |
Tgene | LPCAT2 | chr11:68529003 | chr16:55583189 | ENST00000262134 | 8 | 14 | 404_415 | 311 | 545.0 | Calcium binding | 1 | |
Tgene | LPCAT2 | chr11:68529003 | chr16:55583189 | ENST00000262134 | 8 | 14 | 441_452 | 311 | 545.0 | Calcium binding | 2 | |
Tgene | LPCAT2 | chr11:68529003 | chr16:55583189 | ENST00000262134 | 8 | 14 | 391_426 | 311 | 545.0 | Domain | EF-hand 1 | |
Tgene | LPCAT2 | chr11:68529003 | chr16:55583189 | ENST00000262134 | 8 | 14 | 428_463 | 311 | 545.0 | Domain | EF-hand 2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000265641 | - | 16 | 19 | 123_773 | 676 | 774.0 | Topological domain | Cytoplasmic |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000376618 | - | 16 | 19 | 123_773 | 676 | 757.0 | Topological domain | Cytoplasmic |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000539743 | - | 15 | 18 | 123_773 | 676 | 774.0 | Topological domain | Cytoplasmic |
Hgene | CPT1A | chr11:68529003 | chr16:55583189 | ENST00000540367 | - | 15 | 18 | 123_773 | 676 | 757.0 | Topological domain | Cytoplasmic |
Tgene | LPCAT2 | chr11:68529003 | chr16:55583189 | ENST00000262134 | 8 | 14 | 146_151 | 311 | 545.0 | Motif | HXXXXD motif | |
Tgene | LPCAT2 | chr11:68529003 | chr16:55583189 | ENST00000262134 | 8 | 14 | 220_223 | 311 | 545.0 | Motif | Note=EGTC motif | |
Tgene | LPCAT2 | chr11:68529003 | chr16:55583189 | ENST00000262134 | 8 | 14 | 1_57 | 311 | 545.0 | Topological domain | Cytoplasmic | |
Tgene | LPCAT2 | chr11:68529003 | chr16:55583189 | ENST00000262134 | 8 | 14 | 79_544 | 311 | 545.0 | Topological domain | Lumenal | |
Tgene | LPCAT2 | chr11:68529003 | chr16:55583189 | ENST00000262134 | 8 | 14 | 58_78 | 311 | 545.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
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Fusion Gene Sequence for CPT1A-LPCAT2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>19221_19221_1_CPT1A-LPCAT2_CPT1A_chr11_68529003_ENST00000265641_LPCAT2_chr16_55583189_ENST00000262134_length(transcript)=6455nt_BP=2183nt AATCCGCTGCTGCCGGCGTCGGGTGCGCTCGGCCTCGCCCGCGGCCCTCCTTCCCCGGCTCCCGCTCGCCGCTCGTTCACTCCACCGCCG CCGCCGCCGCCGCCGCTGCCGCTGCCGCTGCCGCACCTCCGTAGCTGACTCGGTACTCTCTGAAGATGGCAGAAGCTCACCAAGCTGTGG CCTTTCAGTTCACGGTCACTCCGGACGGGATTGACCTGCGGCTGAGCCATGAAGCTCTTAGACAAATCTATCTCTCTGGACTTCATTCCT GGAAAAAGAAGTTCATCAGATTCAAGAACGGCATCATCACTGGCGTGTACCCGGCAAGCCCCTCCAGTTGGCTTATCGTGGTGGTGGGCG TGATGACAACGATGTACGCCAAGATCGACCCCTCGTTAGGAATAATTGCAAAAATCAATCGGACTCTGGAAACGGCCAACTGCATGTCCA GCCAGACGAAGAACGTGGTCAGCGGCGTGCTGTTTGGCACCGGCCTGTGGGTGGCCCTCATCGTCACCATGCGCTACTCCCTGAAAGTGC TGCTCTCCTACCACGGGTGGATGTTCACTGAGCACGGCAAGATGAGTCGTGCCACCAAGATCTGGATGGGTATGGTCAAGATCTTTTCAG GCCGAAAACCCATGTTGTACAGCTTCCAGACATCGCTGCCTCGCCTGCCGGTCCCGGCTGTCAAAGACACTGTGAACAGGTATCTACAGT CGGTGAGGCCTCTTATGAAGGAAGAAGACTTCAAACGGATGACAGCACTTGCTCAAGATTTTGCTGTCGGTCTTGGACCAAGATTACAGT GGTATTTGAAGTTAAAATCCTGGTGGGCTACAAATTACGTGAGCGACTGGTGGGAGGAGTACATCTACCTCCGAGGACGAGGGCCGCTCA TGGTGAACAGCAACTATTATGCCATGGATCTGCTGTATATCCTTCCAACTCACATTCAGGCAGCAAGAGCCGGCAACGCCATCCATGCCA TCCTGCTTTACAGGCGCAAACTGGACCGGGAGGAAATCAAACCAATTCGTCTTTTGGGATCCACGATTCCACTCTGCTCCGCTCAGTGGG AGCGGATGTTTAATACTTCCCGGATCCCAGGAGAGGAGACAGACACCATCCAGCACATGAGAGACAGCAAGCACATCGTCGTGTACCATC GAGGACGCTACTTCAAGGTCTGGCTCTACCATGATGGGCGGCTGCTGAAGCCCCGGGAGATGGAGCAGCAGATGCAGAGGATCCTGGACA ATACCTCGGAGCCTCAGCCCGGGGAGGCCAGGCTGGCAGCCCTCACCGCAGGAGACAGAGTTCCCTGGGCCAGGTGTCGTCAGGCCTATT TTGGACGTGGGAAAAATAAGCAGTCTCTTGATGCTGTGGAGAAAGCAGCGTTCTTTGTGACGTTAGATGAAACTGAAGAAGGATACAGAA GTGAAGACCCGGATACGTCAATGGACAGCTACGCCAAATCTCTACTACACGGCCGATGTTACGACAGGTGGTTTGACAAGTCGTTCACGT TTGTTGTCTTCAAAAACGGGAAGATGGGCCTCAACGCTGAACACTCCTGGGCAGATGCGCCGATCGTGGCCCACCTTTGGGAGTACGTCA TGTCCATTGACAGCCTCCAGCTGGGCTATGCGGAGGATGGGCACTGCAAAGGCGACATCAATCCGAACATTCCGTACCCCACCAGGCTGC AGTGGGACATCCCGGGGGAATGTCAAGAGGTTATAGAGACCTCCCTGAACACCGCAAATCTTCTGGCAAACGACGTGGATTTCCATTCCT TCCCATTCGTAGCCTTTGGTAAAGGAATCATCAAGAAATGTCGCACGAGCCCAGACGCCTTTGTGCAGCTGGCCCTCCAGCTGGCGCACT ACAAGGACATGGGCAAGTTTTGCCTCACATACGAGGCCTCCATGACCCGGCTCTTCCGAGAGGGGAGGACGGAGACCGTGCGCTCCTGCA CCACTGAGTCATGCGACTTCGTGCGGGCCATGGTGGACCCGGCCCAGACGGTGGAACAGAGGCTGAAGTTGTTCAAGTTGGCGTCTGAGA AGCATCAGCATATGTATCGCCTCGCCATGACCGGCTCTGGGATCGATCGTCACCTCTTCTGCCTTTACGTGGTGTCTAAATATCTCGCTG TGGAGTCCCCTTTCCTTAAGGAAAGCTCTGGGAATACCAGTAACAGATCATACCTATGAAGACTGCAGATTGATGATTTCAGCAGGACAG CTAACATTGCCTATGGAAGCTGGGCTGGTGGAATTTACTAAAATTAGCCGAAAATTGAAATTAGATTGGGATGGTGTTCGTAAGCATTTG GATGAATATGCATCTATTGCGAGTTCCTCAAAAGGAGGAAGAATTGGAATTGAAGAATTCGCCAAGTATTTAAAGTTGCCTGTTTCAGAT GTCTTGAGACAACTTTTTGCACTCTTTGACAGGAACCATGATGGCAGCATTGACTTCCGAGAGTATGTGATTGGCCTGGCTGTCTTGTGC AACCCTTCCAACACAGAGGAGATCATCCAGGTGGCATTTAAGCTGTTTGACGTTGATGAGGATGGCTACATAACGGAGGAAGAGTTCTCC ACCATTCTACAGGCTTCCCTTGGAGTGCCTGACCTTGATGTTTCTGGTCTCTTCAAGGAAATAGCCCAAGGGGACTCAATTTCCTATGAG GAATTTAAAAGTTTTGCCTTAAAGCATCCAGAATATGCTAAGATATTTACAACATACCTAGACCTCCAGACGTGCCATGTGTTTTCATTA CCAAAAGAAGTCCAGACAACCCCCTCCACCGCCAGTAATAAAGTCAGCCCTGAAAAGCATGAAGAGAGTACCTCAGACAAAAAAGATGAC TGAAAGCAGTATTTCCAATAAGGAAAACACAGTAGCTTTTGCTTGAAATTGTAAAGGCACTTATTGATAATACTTTTAATGTGTTGGTAA TGATGTTTAAAATTGAAAGATTTTTAAAACAAAAATGATAGATTTTCTTACTAAAAATGTTTTTATTAACCTTGCTTTTATTGGAAAAAA TCAAGCAATATTTCGTTTTCTTTTGTGTTATATTGTACTTTACTGATTCATTTACTGGTGATACATATGTTTTTATGGATTTTCCAGTTT AATTTGCATATACAAATGAATGCAATGGTCTATTGGTGAGCATTGAGCAACACTGTATAAAGTTTTAAAAATGTAAACACTTTTTAATCT ACTTTCCTCTAAAAATCAATAATATTCTATTATTTCTAATCCTTTTCCACTTGGGAAATAACAATGAAGAATCTGAGAATTTGACATCTA TAACTTTACAGATTCATTTTTCCATTTAAATTTCAGTTTCTTGGATCACTGAATATGGGAAGGGAGAGCTTCACTAATTAGACGCAGCTT CTTAAGAACTTATATTCTCTTTGACATACATCTCTATTGTAGTTTTTTGTTTTGTTTTGTTTTTTGAGATGGAGTCTTGCTCTGTCACCC AGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCGTACCTCAGACTCCCGAGTAGTT GGGATTACAGGTGCCCACCACCACACCCGACTAATTTTTGTATTTTTAGTAGCCATGTGGTTTTGCCATGTTGGCCAGGCTGGTTTCGAA CTCCTGACCTCAGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGTTCCCGGCCTATTGTAGATTTT CTTAACTACTTGCTAAGGAAATCATATCCTTTTACATGAACTACAGGTTTAGAACTTGGTTTTAAGACAACTGCTATGGCCAGAAGGTAA ATGGGAATTGCCTTATTGAAGGTAACATTGATTGCCTAATAAGAAAATGAATTGTTTGCCACAGAGTTGAATTTAATTTGAGTTAGATAG TTCAGAATGTAGCACTTGCCCTATAAATGAATCAGATTTGTTCTATTTATATAATATTAGAATTAATATATTATCATGTAAGTGGGAATT TTATTTTGTTAAGTGGACTCTCAAATTTTAGAACTTGTGTGAAATATCTCCCAGAAAACACAAAAGGTTTCAAGGTATCACCCAAAGCTA GGGAATCAACAAACGTACTTTATTAATGCAAGACCACAATTTAAGCCCCAGGCAGGAATCCAACAGTAACATTTTTCCTTTAGGTTAAGC AGTAATTTTTTTGAATTGTCATTTTTAATGGGTCTCACACATGCATATTGCTAATATCATTCATGTTTGAGGTTTTCAACAAAGAACCAA TTTATTAATATAATGTACAAAAATAGTTGGTTCATTTTCTGAATTCAGTCTTTGAAATAAAACTCCTTGTTTTGGCCGTGTTTCTGAATG TATTGGTGATTCACCCCCAAGCTAATTTTTTAAAGTCATTTTTGAAGTTGGGAAGTCTCATGAGAGATGTTGAAGTATGTATTTAATCAA GAGTCATGATTTCAAACTAGTTTTACATATTAAGCAGTTAGTGTTCTAATTTAATGGGTAAATGTGTGTTTGGATAAATATCTGAAAATT TTATCCTTAAGTATATATAATTATTTGCCTCTTATATGTCTTAAAGCTATTTAAACAAGGTGTTAAATGAGCCAAAACAATTAAGTAATT AGAACAGTACATTTTTATCAGAGTGTCTGTCATATGCAATGAATGTATGTAATACTAAAAAATCATGACTACTTTTATCAAAGAAAAACC ACACATTAATCCTATTAATCATGAAAGCGTAGCATTGTAAATTAAAGGTTTTCTTTGAGGCTCTTGAAAGTGATCCCATTGCTTTCCTGT TTTAAAAATATTTTATGCTCTTTATTTCCACTTCTGTGAATGTGATATTTCTATTTTGTGATTATGTTACTGAATAAACAAACTTGCTAC ATAAAATTCTTAGCAATTAAAAAAATTCTGATTCTGCCATTTTGTCTCAAATGTAATATACCCTTTTAATATCATATGTTTACATATTTA TGAATGATTAATCATTTTTGTTTGCATTAAACTTTATGAAATGTCAGAAATGATTTTACTCTAATGAAACTCAAATTTTGCCCAAAGTAG CAATATTCTTAAAGATGTTGAATTTTGACTGGTTGAATTTTATATAGTAACACACAAGTCGTGATCATCAATATTATTGCAGACCAGGAC TCTGCTTATATGCCTTGCTAACAAAGATTTCTTTCACAGAGGCTTTTCTCCTCTCAAGACTTAAAGTAAGAATTACATTTTATTAAGTCA GTTAAATGCACCATGGCTTCATATAGTAATATAAAAAAACTCTTTGAAGTGAGAAATATTATATCCTAAAACCTCTAAACCACAAACATT CAATTGAAAGAGTTCTGTTGAAGGATAATGACATACTGACTGCTTACAGACCAAGTTGCTTGCATTTTGTATGTTTAGCCCTCCTTTGCC ACTGCTTTTAGAGCCTTGGAAGGCTAAGTGTGATAGTAATGCTAGCTCTAATGCATATTTAAAGGAGACTGCCTCGCTTTTAGAAGACAT CTGGTCTGCTCTCTGCATGAGGCACAGCAGTAAAGCTCTTTGATTCCCAGAATCAAGAACTCTCCCCTTCAGACTATTACCGAATGCAAG GTGGTTAATTGAAGGCCACTAATTGATGCTCAAATAGAAGGATATTGACTATATTGGAACAGATGGAGTCTCTACTACAAAAGTCTTTGG GTATTTGTTTCTTACATAGAAAATGCTAACATGAATAGAAAGATACTGGTGCAAGACCATTCCCGGGAAAGTAGACATACTTACATTTTT TTCCTTTTCTGCTCATTTGAATGAACTCAATTTTATGTTAAATTGTTATATCAGAGTGACAAATAAGTGCTATGGCTTGATAGAAGTGAA GCTCTTCACATATATTCAAAATACATATCACAAACTTTGGTAAATAGGATAGTAATCTGAAGAACTTTTGCCCTTTTTACCCCATTTACT GTAACTCTTGTTTCTAGGTAATCGTTCTCTCTCAACAAACTTCTCAAGCGTCTGTGTAACAAGCCACATGTTCTAACAAATTGTCTCCAT CGCACTTCAACAGCCAGGTCCCTATTTTTTATAACGTATTAACCTTATTATTTTCTTATTATTTTAAAAGAATCTATGCACATTAGCAAA ATTTAAAAGATAGAGAAAAATATAAACAGAAAAAATTATGTTTACTTCTACCACCCTAAATCAACTATTATCAATTTTATACATATTTTA CTCCATCTTTTTTCAAAGTTTCTTACATTTTCCAATGTCATTAAAATTCTCTGTGAATGTAAATTTTAAAAACTGTACCTACTGTTTTTT >19221_19221_1_CPT1A-LPCAT2_CPT1A_chr11_68529003_ENST00000265641_LPCAT2_chr16_55583189_ENST00000262134_length(amino acids)=694AA_BP= MTRYSLKMAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKKFIRFKNGIITGVYPASPSSWLIVVVGVMTTMYAKIDPSLGI IAKINRTLETANCMSSQTKNVVSGVLFGTGLWVALIVTMRYSLKVLLSYHGWMFTEHGKMSRATKIWMGMVKIFSGRKPMLYSFQTSLPR LPVPAVKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAVGLGPRLQWYLKLKSWWATNYVSDWWEEYIYLRGRGPLMVNSNYYAMDLLYIL PTHIQAARAGNAIHAILLYRRKLDREEIKPIRLLGSTIPLCSAQWERMFNTSRIPGEETDTIQHMRDSKHIVVYHRGRYFKVWLYHDGRL LKPREMEQQMQRILDNTSEPQPGEARLAALTAGDRVPWARCRQAYFGRGKNKQSLDAVEKAAFFVTLDETEEGYRSEDPDTSMDSYAKSL LHGRCYDRWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHLWEYVMSIDSLQLGYAEDGHCKGDINPNIPYPTRLQWDIPGECQEVIETS LNTANLLANDVDFHSFPFVAFGKGIIKKCRTSPDAFVQLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMVDPA -------------------------------------------------------------- >19221_19221_2_CPT1A-LPCAT2_CPT1A_chr11_68529003_ENST00000376618_LPCAT2_chr16_55583189_ENST00000262134_length(transcript)=6470nt_BP=2198nt GGACCCGCCTCAGCCAATCCGCTGCTGCCGGCGTCGGGTGCGCTCGGCCTCGCCCGCGGCCCTCCTTCCCCGGCTCCCGCTCGCCGCTCG TTCACTCCACCGCCGCCGCCGCCGCCGCCGCTGCCGCTGCCGCTGCCGCACCTCCGTAGCTGACTCGGTACTCTCTGAAGATGGCAGAAG CTCACCAAGCTGTGGCCTTTCAGTTCACGGTCACTCCGGACGGGATTGACCTGCGGCTGAGCCATGAAGCTCTTAGACAAATCTATCTCT CTGGACTTCATTCCTGGAAAAAGAAGTTCATCAGATTCAAGAACGGCATCATCACTGGCGTGTACCCGGCAAGCCCCTCCAGTTGGCTTA TCGTGGTGGTGGGCGTGATGACAACGATGTACGCCAAGATCGACCCCTCGTTAGGAATAATTGCAAAAATCAATCGGACTCTGGAAACGG CCAACTGCATGTCCAGCCAGACGAAGAACGTGGTCAGCGGCGTGCTGTTTGGCACCGGCCTGTGGGTGGCCCTCATCGTCACCATGCGCT ACTCCCTGAAAGTGCTGCTCTCCTACCACGGGTGGATGTTCACTGAGCACGGCAAGATGAGTCGTGCCACCAAGATCTGGATGGGTATGG TCAAGATCTTTTCAGGCCGAAAACCCATGTTGTACAGCTTCCAGACATCGCTGCCTCGCCTGCCGGTCCCGGCTGTCAAAGACACTGTGA ACAGGTATCTACAGTCGGTGAGGCCTCTTATGAAGGAAGAAGACTTCAAACGGATGACAGCACTTGCTCAAGATTTTGCTGTCGGTCTTG GACCAAGATTACAGTGGTATTTGAAGTTAAAATCCTGGTGGGCTACAAATTACGTGAGCGACTGGTGGGAGGAGTACATCTACCTCCGAG GACGAGGGCCGCTCATGGTGAACAGCAACTATTATGCCATGGATCTGCTGTATATCCTTCCAACTCACATTCAGGCAGCAAGAGCCGGCA ACGCCATCCATGCCATCCTGCTTTACAGGCGCAAACTGGACCGGGAGGAAATCAAACCAATTCGTCTTTTGGGATCCACGATTCCACTCT GCTCCGCTCAGTGGGAGCGGATGTTTAATACTTCCCGGATCCCAGGAGAGGAGACAGACACCATCCAGCACATGAGAGACAGCAAGCACA TCGTCGTGTACCATCGAGGACGCTACTTCAAGGTCTGGCTCTACCATGATGGGCGGCTGCTGAAGCCCCGGGAGATGGAGCAGCAGATGC AGAGGATCCTGGACAATACCTCGGAGCCTCAGCCCGGGGAGGCCAGGCTGGCAGCCCTCACCGCAGGAGACAGAGTTCCCTGGGCCAGGT GTCGTCAGGCCTATTTTGGACGTGGGAAAAATAAGCAGTCTCTTGATGCTGTGGAGAAAGCAGCGTTCTTTGTGACGTTAGATGAAACTG AAGAAGGATACAGAAGTGAAGACCCGGATACGTCAATGGACAGCTACGCCAAATCTCTACTACACGGCCGATGTTACGACAGGTGGTTTG ACAAGTCGTTCACGTTTGTTGTCTTCAAAAACGGGAAGATGGGCCTCAACGCTGAACACTCCTGGGCAGATGCGCCGATCGTGGCCCACC TTTGGGAGTACGTCATGTCCATTGACAGCCTCCAGCTGGGCTATGCGGAGGATGGGCACTGCAAAGGCGACATCAATCCGAACATTCCGT ACCCCACCAGGCTGCAGTGGGACATCCCGGGGGAATGTCAAGAGGTTATAGAGACCTCCCTGAACACCGCAAATCTTCTGGCAAACGACG TGGATTTCCATTCCTTCCCATTCGTAGCCTTTGGTAAAGGAATCATCAAGAAATGTCGCACGAGCCCAGACGCCTTTGTGCAGCTGGCCC TCCAGCTGGCGCACTACAAGGACATGGGCAAGTTTTGCCTCACATACGAGGCCTCCATGACCCGGCTCTTCCGAGAGGGGAGGACGGAGA CCGTGCGCTCCTGCACCACTGAGTCATGCGACTTCGTGCGGGCCATGGTGGACCCGGCCCAGACGGTGGAACAGAGGCTGAAGTTGTTCA AGTTGGCGTCTGAGAAGCATCAGCATATGTATCGCCTCGCCATGACCGGCTCTGGGATCGATCGTCACCTCTTCTGCCTTTACGTGGTGT CTAAATATCTCGCTGTGGAGTCCCCTTTCCTTAAGGAAAGCTCTGGGAATACCAGTAACAGATCATACCTATGAAGACTGCAGATTGATG ATTTCAGCAGGACAGCTAACATTGCCTATGGAAGCTGGGCTGGTGGAATTTACTAAAATTAGCCGAAAATTGAAATTAGATTGGGATGGT GTTCGTAAGCATTTGGATGAATATGCATCTATTGCGAGTTCCTCAAAAGGAGGAAGAATTGGAATTGAAGAATTCGCCAAGTATTTAAAG TTGCCTGTTTCAGATGTCTTGAGACAACTTTTTGCACTCTTTGACAGGAACCATGATGGCAGCATTGACTTCCGAGAGTATGTGATTGGC CTGGCTGTCTTGTGCAACCCTTCCAACACAGAGGAGATCATCCAGGTGGCATTTAAGCTGTTTGACGTTGATGAGGATGGCTACATAACG GAGGAAGAGTTCTCCACCATTCTACAGGCTTCCCTTGGAGTGCCTGACCTTGATGTTTCTGGTCTCTTCAAGGAAATAGCCCAAGGGGAC TCAATTTCCTATGAGGAATTTAAAAGTTTTGCCTTAAAGCATCCAGAATATGCTAAGATATTTACAACATACCTAGACCTCCAGACGTGC CATGTGTTTTCATTACCAAAAGAAGTCCAGACAACCCCCTCCACCGCCAGTAATAAAGTCAGCCCTGAAAAGCATGAAGAGAGTACCTCA GACAAAAAAGATGACTGAAAGCAGTATTTCCAATAAGGAAAACACAGTAGCTTTTGCTTGAAATTGTAAAGGCACTTATTGATAATACTT TTAATGTGTTGGTAATGATGTTTAAAATTGAAAGATTTTTAAAACAAAAATGATAGATTTTCTTACTAAAAATGTTTTTATTAACCTTGC TTTTATTGGAAAAAATCAAGCAATATTTCGTTTTCTTTTGTGTTATATTGTACTTTACTGATTCATTTACTGGTGATACATATGTTTTTA TGGATTTTCCAGTTTAATTTGCATATACAAATGAATGCAATGGTCTATTGGTGAGCATTGAGCAACACTGTATAAAGTTTTAAAAATGTA AACACTTTTTAATCTACTTTCCTCTAAAAATCAATAATATTCTATTATTTCTAATCCTTTTCCACTTGGGAAATAACAATGAAGAATCTG AGAATTTGACATCTATAACTTTACAGATTCATTTTTCCATTTAAATTTCAGTTTCTTGGATCACTGAATATGGGAAGGGAGAGCTTCACT AATTAGACGCAGCTTCTTAAGAACTTATATTCTCTTTGACATACATCTCTATTGTAGTTTTTTGTTTTGTTTTGTTTTTTGAGATGGAGT CTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCGTACCTCA GACTCCCGAGTAGTTGGGATTACAGGTGCCCACCACCACACCCGACTAATTTTTGTATTTTTAGTAGCCATGTGGTTTTGCCATGTTGGC CAGGCTGGTTTCGAACTCCTGACCTCAGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGTTCCCGG CCTATTGTAGATTTTCTTAACTACTTGCTAAGGAAATCATATCCTTTTACATGAACTACAGGTTTAGAACTTGGTTTTAAGACAACTGCT ATGGCCAGAAGGTAAATGGGAATTGCCTTATTGAAGGTAACATTGATTGCCTAATAAGAAAATGAATTGTTTGCCACAGAGTTGAATTTA ATTTGAGTTAGATAGTTCAGAATGTAGCACTTGCCCTATAAATGAATCAGATTTGTTCTATTTATATAATATTAGAATTAATATATTATC ATGTAAGTGGGAATTTTATTTTGTTAAGTGGACTCTCAAATTTTAGAACTTGTGTGAAATATCTCCCAGAAAACACAAAAGGTTTCAAGG TATCACCCAAAGCTAGGGAATCAACAAACGTACTTTATTAATGCAAGACCACAATTTAAGCCCCAGGCAGGAATCCAACAGTAACATTTT TCCTTTAGGTTAAGCAGTAATTTTTTTGAATTGTCATTTTTAATGGGTCTCACACATGCATATTGCTAATATCATTCATGTTTGAGGTTT TCAACAAAGAACCAATTTATTAATATAATGTACAAAAATAGTTGGTTCATTTTCTGAATTCAGTCTTTGAAATAAAACTCCTTGTTTTGG CCGTGTTTCTGAATGTATTGGTGATTCACCCCCAAGCTAATTTTTTAAAGTCATTTTTGAAGTTGGGAAGTCTCATGAGAGATGTTGAAG TATGTATTTAATCAAGAGTCATGATTTCAAACTAGTTTTACATATTAAGCAGTTAGTGTTCTAATTTAATGGGTAAATGTGTGTTTGGAT AAATATCTGAAAATTTTATCCTTAAGTATATATAATTATTTGCCTCTTATATGTCTTAAAGCTATTTAAACAAGGTGTTAAATGAGCCAA AACAATTAAGTAATTAGAACAGTACATTTTTATCAGAGTGTCTGTCATATGCAATGAATGTATGTAATACTAAAAAATCATGACTACTTT TATCAAAGAAAAACCACACATTAATCCTATTAATCATGAAAGCGTAGCATTGTAAATTAAAGGTTTTCTTTGAGGCTCTTGAAAGTGATC CCATTGCTTTCCTGTTTTAAAAATATTTTATGCTCTTTATTTCCACTTCTGTGAATGTGATATTTCTATTTTGTGATTATGTTACTGAAT AAACAAACTTGCTACATAAAATTCTTAGCAATTAAAAAAATTCTGATTCTGCCATTTTGTCTCAAATGTAATATACCCTTTTAATATCAT ATGTTTACATATTTATGAATGATTAATCATTTTTGTTTGCATTAAACTTTATGAAATGTCAGAAATGATTTTACTCTAATGAAACTCAAA TTTTGCCCAAAGTAGCAATATTCTTAAAGATGTTGAATTTTGACTGGTTGAATTTTATATAGTAACACACAAGTCGTGATCATCAATATT ATTGCAGACCAGGACTCTGCTTATATGCCTTGCTAACAAAGATTTCTTTCACAGAGGCTTTTCTCCTCTCAAGACTTAAAGTAAGAATTA CATTTTATTAAGTCAGTTAAATGCACCATGGCTTCATATAGTAATATAAAAAAACTCTTTGAAGTGAGAAATATTATATCCTAAAACCTC TAAACCACAAACATTCAATTGAAAGAGTTCTGTTGAAGGATAATGACATACTGACTGCTTACAGACCAAGTTGCTTGCATTTTGTATGTT TAGCCCTCCTTTGCCACTGCTTTTAGAGCCTTGGAAGGCTAAGTGTGATAGTAATGCTAGCTCTAATGCATATTTAAAGGAGACTGCCTC GCTTTTAGAAGACATCTGGTCTGCTCTCTGCATGAGGCACAGCAGTAAAGCTCTTTGATTCCCAGAATCAAGAACTCTCCCCTTCAGACT ATTACCGAATGCAAGGTGGTTAATTGAAGGCCACTAATTGATGCTCAAATAGAAGGATATTGACTATATTGGAACAGATGGAGTCTCTAC TACAAAAGTCTTTGGGTATTTGTTTCTTACATAGAAAATGCTAACATGAATAGAAAGATACTGGTGCAAGACCATTCCCGGGAAAGTAGA CATACTTACATTTTTTTCCTTTTCTGCTCATTTGAATGAACTCAATTTTATGTTAAATTGTTATATCAGAGTGACAAATAAGTGCTATGG CTTGATAGAAGTGAAGCTCTTCACATATATTCAAAATACATATCACAAACTTTGGTAAATAGGATAGTAATCTGAAGAACTTTTGCCCTT TTTACCCCATTTACTGTAACTCTTGTTTCTAGGTAATCGTTCTCTCTCAACAAACTTCTCAAGCGTCTGTGTAACAAGCCACATGTTCTA ACAAATTGTCTCCATCGCACTTCAACAGCCAGGTCCCTATTTTTTATAACGTATTAACCTTATTATTTTCTTATTATTTTAAAAGAATCT ATGCACATTAGCAAAATTTAAAAGATAGAGAAAAATATAAACAGAAAAAATTATGTTTACTTCTACCACCCTAAATCAACTATTATCAAT TTTATACATATTTTACTCCATCTTTTTTCAAAGTTTCTTACATTTTCCAATGTCATTAAAATTCTCTGTGAATGTAAATTTTAAAAACTG >19221_19221_2_CPT1A-LPCAT2_CPT1A_chr11_68529003_ENST00000376618_LPCAT2_chr16_55583189_ENST00000262134_length(amino acids)=694AA_BP= MTRYSLKMAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKKFIRFKNGIITGVYPASPSSWLIVVVGVMTTMYAKIDPSLGI IAKINRTLETANCMSSQTKNVVSGVLFGTGLWVALIVTMRYSLKVLLSYHGWMFTEHGKMSRATKIWMGMVKIFSGRKPMLYSFQTSLPR LPVPAVKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAVGLGPRLQWYLKLKSWWATNYVSDWWEEYIYLRGRGPLMVNSNYYAMDLLYIL PTHIQAARAGNAIHAILLYRRKLDREEIKPIRLLGSTIPLCSAQWERMFNTSRIPGEETDTIQHMRDSKHIVVYHRGRYFKVWLYHDGRL LKPREMEQQMQRILDNTSEPQPGEARLAALTAGDRVPWARCRQAYFGRGKNKQSLDAVEKAAFFVTLDETEEGYRSEDPDTSMDSYAKSL LHGRCYDRWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHLWEYVMSIDSLQLGYAEDGHCKGDINPNIPYPTRLQWDIPGECQEVIETS LNTANLLANDVDFHSFPFVAFGKGIIKKCRTSPDAFVQLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMVDPA -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CPT1A-LPCAT2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CPT1A-LPCAT2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CPT1A-LPCAT2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CPT1A | C1829703 | Carnitine palmitoyl transferase 1A deficiency | 13 | CLINGEN;CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | CPT1A | C0002152 | Alloxan Diabetes | 1 | CTD_human |
Hgene | CPT1A | C0006142 | Malignant neoplasm of breast | 1 | CTD_human |
Hgene | CPT1A | C0011849 | Diabetes Mellitus | 1 | CTD_human |
Hgene | CPT1A | C0011853 | Diabetes Mellitus, Experimental | 1 | CTD_human |
Hgene | CPT1A | C0011860 | Diabetes Mellitus, Non-Insulin-Dependent | 1 | CTD_human |
Hgene | CPT1A | C0022661 | Kidney Failure, Chronic | 1 | CTD_human |
Hgene | CPT1A | C0038433 | Streptozotocin Diabetes | 1 | CTD_human |
Hgene | CPT1A | C0400966 | Non-alcoholic Fatty Liver Disease | 1 | CTD_human |
Hgene | CPT1A | C0678222 | Breast Carcinoma | 1 | CTD_human |
Hgene | CPT1A | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
Hgene | CPT1A | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Hgene | CPT1A | C3241937 | Nonalcoholic Steatohepatitis | 1 | CTD_human |
Hgene | CPT1A | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |
Tgene | C0032460 | Polycystic Ovary Syndrome | 1 | CTD_human | |
Tgene | C1136382 | Sclerocystic Ovaries | 1 | CTD_human |