Fusion Gene Studies
in Kim Lab

FusionBase FusionGDB FusionGDB2 FusionPDB FusionNeoAntigen FusionAI FusionNW FGviewer Publication Contact
FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
leaf

Fusion Gene Summary

leaf

Fusion Gene ORF analysis

leaf

Fusion Genomic Features

leaf

Fusion Protein Features

leaf

Fusion Gene Sequence

leaf

Fusion Gene PPI analysis

leaf

Related Drugs

leaf

Related Diseases

Fusion gene:C19orf25-PEPD (FusionGDB2 ID:HG148223TG5184)

Fusion Gene Summary for C19orf25-PEPD

check button Fusion gene summary
Fusion gene informationFusion gene name: C19orf25-PEPD
Fusion gene ID: hg148223tg5184
HgeneTgene
Gene symbol

C19orf25

PEPD

Gene ID

148223

5184

Gene namechromosome 19 open reading frame 25peptidase D
Synonyms-PROLIDASE
Cytomap('C19orf25')('PEPD')

19p13.3

19q13.11

Type of geneprotein-codingprotein-coding
DescriptionUPF0449 protein C19orf25xaa-Pro dipeptidaseX-Pro dipeptidaseaminoacyl-L-proline hydrolaseimidodipeptidaseproline dipeptidasetesticular tissue protein Li 138
Modification date2020031320200313
UniProtAcc

Q9UFG5

.
Ensembl transtripts involved in fusion geneENST00000436106, ENST00000585675, 
ENST00000586564, ENST00000588427, 
ENST00000588849, ENST00000588871, 
ENST00000592872, ENST00000591027, 
ENST00000427685, 
Fusion gene scores* DoF score10 X 4 X 9=36018 X 11 X 13=2574
# samples 1223
** MAII scorelog2(12/360*10)=-1.58496250072116
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(23/2574*10)=-3.48430628727633
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: C19orf25 [Title/Abstract] AND PEPD [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointC19orf25(1478773)-PEPD(33882385), # samples:3
Anticipated loss of major functional domain due to fusion event.C19orf25-PEPD seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
C19orf25-PEPD seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across C19orf25 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure
check buttonFusion gene breakpoints across PEPD (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4MESOTCGA-MQ-A4LP-01AC19orf25chr19

1478773

-PEPDchr19

33882385

-
ChimerDB4MESOTCGA-MQ-A4LPC19orf25chr19

1478772

-PEPDchr19

33882385

-


Top

Fusion Gene ORF analysis for C19orf25-PEPD

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000436106ENST00000591968C19orf25chr19

1478773

-PEPDchr19

33882385

-
5CDS-5UTRENST00000436106ENST00000591968C19orf25chr19

1478772

-PEPDchr19

33882385

-
5CDS-5UTRENST00000585675ENST00000591968C19orf25chr19

1478773

-PEPDchr19

33882385

-
5CDS-5UTRENST00000585675ENST00000591968C19orf25chr19

1478772

-PEPDchr19

33882385

-
5CDS-5UTRENST00000586564ENST00000591968C19orf25chr19

1478773

-PEPDchr19

33882385

-
5CDS-5UTRENST00000586564ENST00000591968C19orf25chr19

1478772

-PEPDchr19

33882385

-
5CDS-5UTRENST00000588427ENST00000591968C19orf25chr19

1478773

-PEPDchr19

33882385

-
5CDS-5UTRENST00000588427ENST00000591968C19orf25chr19

1478772

-PEPDchr19

33882385

-
5CDS-5UTRENST00000588849ENST00000591968C19orf25chr19

1478773

-PEPDchr19

33882385

-
5CDS-5UTRENST00000588849ENST00000591968C19orf25chr19

1478772

-PEPDchr19

33882385

-
5CDS-5UTRENST00000588871ENST00000591968C19orf25chr19

1478773

-PEPDchr19

33882385

-
5CDS-5UTRENST00000588871ENST00000591968C19orf25chr19

1478772

-PEPDchr19

33882385

-
5CDS-5UTRENST00000592872ENST00000591968C19orf25chr19

1478773

-PEPDchr19

33882385

-
5CDS-5UTRENST00000592872ENST00000591968C19orf25chr19

1478772

-PEPDchr19

33882385

-
5UTR-3CDSENST00000591027ENST00000244137C19orf25chr19

1478773

-PEPDchr19

33882385

-
5UTR-3CDSENST00000591027ENST00000244137C19orf25chr19

1478772

-PEPDchr19

33882385

-
5UTR-3CDSENST00000591027ENST00000397032C19orf25chr19

1478773

-PEPDchr19

33882385

-
5UTR-3CDSENST00000591027ENST00000397032C19orf25chr19

1478772

-PEPDchr19

33882385

-
5UTR-3CDSENST00000591027ENST00000436370C19orf25chr19

1478773

-PEPDchr19

33882385

-
5UTR-3CDSENST00000591027ENST00000436370C19orf25chr19

1478772

-PEPDchr19

33882385

-
5UTR-5UTRENST00000591027ENST00000591968C19orf25chr19

1478773

-PEPDchr19

33882385

-
5UTR-5UTRENST00000591027ENST00000591968C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000436106ENST00000244137C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000436106ENST00000244137C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000436106ENST00000397032C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000436106ENST00000397032C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000436106ENST00000436370C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000436106ENST00000436370C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000586564ENST00000244137C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000586564ENST00000244137C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000586564ENST00000397032C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000586564ENST00000397032C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000586564ENST00000436370C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000586564ENST00000436370C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000588427ENST00000244137C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000588427ENST00000244137C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000588427ENST00000397032C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000588427ENST00000397032C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000588427ENST00000436370C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000588427ENST00000436370C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000588849ENST00000244137C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000588849ENST00000244137C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000588849ENST00000397032C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000588849ENST00000397032C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000588849ENST00000436370C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000588849ENST00000436370C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000588871ENST00000244137C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000588871ENST00000244137C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000588871ENST00000397032C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000588871ENST00000397032C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000588871ENST00000436370C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000588871ENST00000436370C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000592872ENST00000244137C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000592872ENST00000244137C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000592872ENST00000397032C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000592872ENST00000397032C19orf25chr19

1478772

-PEPDchr19

33882385

-
Frame-shiftENST00000592872ENST00000436370C19orf25chr19

1478773

-PEPDchr19

33882385

-
Frame-shiftENST00000592872ENST00000436370C19orf25chr19

1478772

-PEPDchr19

33882385

-
In-frameENST00000585675ENST00000244137C19orf25chr19

1478773

-PEPDchr19

33882385

-
In-frameENST00000585675ENST00000244137C19orf25chr19

1478772

-PEPDchr19

33882385

-
In-frameENST00000585675ENST00000397032C19orf25chr19

1478773

-PEPDchr19

33882385

-
In-frameENST00000585675ENST00000397032C19orf25chr19

1478772

-PEPDchr19

33882385

-
In-frameENST00000585675ENST00000436370C19orf25chr19

1478773

-PEPDchr19

33882385

-
In-frameENST00000585675ENST00000436370C19orf25chr19

1478772

-PEPDchr19

33882385

-
intron-3CDSENST00000427685ENST00000244137C19orf25chr19

1478773

-PEPDchr19

33882385

-
intron-3CDSENST00000427685ENST00000244137C19orf25chr19

1478772

-PEPDchr19

33882385

-
intron-3CDSENST00000427685ENST00000397032C19orf25chr19

1478773

-PEPDchr19

33882385

-
intron-3CDSENST00000427685ENST00000397032C19orf25chr19

1478772

-PEPDchr19

33882385

-
intron-3CDSENST00000427685ENST00000436370C19orf25chr19

1478773

-PEPDchr19

33882385

-
intron-3CDSENST00000427685ENST00000436370C19orf25chr19

1478772

-PEPDchr19

33882385

-
intron-5UTRENST00000427685ENST00000591968C19orf25chr19

1478773

-PEPDchr19

33882385

-
intron-5UTRENST00000427685ENST00000591968C19orf25chr19

1478772

-PEPDchr19

33882385

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000585675C19orf25chr191478773-ENST00000244137PEPDchr1933882385-10831746942231
ENST00000585675C19orf25chr191478773-ENST00000397032PEPDchr1933882385-10531746942231
ENST00000585675C19orf25chr191478773-ENST00000436370PEPDchr1933882385-100917444688214
ENST00000585675C19orf25chr191478772-ENST00000244137PEPDchr1933882385-10831746942231
ENST00000585675C19orf25chr191478772-ENST00000397032PEPDchr1933882385-10531746942231
ENST00000585675C19orf25chr191478772-ENST00000436370PEPDchr1933882385-100917444688214

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000585675ENST00000244137C19orf25chr191478773-PEPDchr1933882385-0.0141089440.98589104
ENST00000585675ENST00000397032C19orf25chr191478773-PEPDchr1933882385-0.014282350.98571765
ENST00000585675ENST00000436370C19orf25chr191478773-PEPDchr1933882385-0.0163583180.9836416
ENST00000585675ENST00000244137C19orf25chr191478772-PEPDchr1933882385-0.0141089440.98589104
ENST00000585675ENST00000397032C19orf25chr191478772-PEPDchr1933882385-0.014282350.98571765
ENST00000585675ENST00000436370C19orf25chr191478772-PEPDchr1933882385-0.0163583180.9836416

Top

Fusion Genomic Features for C19orf25-PEPD


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

Top

Fusion Protein Features for C19orf25-PEPD


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr19:1478773/chr19:33882385)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
C19orf25

Q9UFG5

.
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneC19orf25chr19:1478772chr19:33882385ENST00000436106-2381_10943119.0Coiled coilOntology_term=ECO:0000255
HgeneC19orf25chr19:1478772chr19:33882385ENST00000585675-2381_10943119.0Coiled coilOntology_term=ECO:0000255
HgeneC19orf25chr19:1478772chr19:33882385ENST00000586564-1281_10943119.0Coiled coilOntology_term=ECO:0000255
HgeneC19orf25chr19:1478772chr19:33882385ENST00000592872-2381_10943119.0Coiled coilOntology_term=ECO:0000255
HgeneC19orf25chr19:1478773chr19:33882385ENST00000436106-2381_10943119.0Coiled coilOntology_term=ECO:0000255
HgeneC19orf25chr19:1478773chr19:33882385ENST00000585675-2381_10943119.0Coiled coilOntology_term=ECO:0000255
HgeneC19orf25chr19:1478773chr19:33882385ENST00000586564-1281_10943119.0Coiled coilOntology_term=ECO:0000255
HgeneC19orf25chr19:1478773chr19:33882385ENST00000592872-2381_10943119.0Coiled coilOntology_term=ECO:0000255


Top

Fusion Gene Sequence for C19orf25-PEPD


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>11173_11173_1_C19orf25-PEPD_C19orf25_chr19_1478772_ENST00000585675_PEPD_chr19_33882385_ENST00000244137_length(transcript)=1083nt_BP=174nt
TTTCGGGTCCCGCGCCCAGGTGGGAAGAGGCCGGCGACTGGGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAG
CGCCCCCCACGGTGGAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGTGTCT
GGTGGCCTGACATGCACCGCCTGGCTGACCGCATCCACCTGGAGGAGCTGGCCCACATGGGCATCCTGAGCGGCAGCGTGGACGCCATGG
TCCAGGCTCACCTGGGGGCCGTGTTTATGCCTCACGGGCTTGGCCACTTCCTGGGCATTGACGTGCACGACGTGGGAGGCTACCCAGAGG
GCGTGGAGCGCATCGACGAGCCCGGCCTGCGGAGCCTGCGCACTGCACGGCACCTGCAGCCAGGCATGGTGCTCACCGTGGAGCCGGGCA
TCTACTTCATCGACCACCTCCTGGATGAGGCCCTGGCGGACCCGGCCCGCGCCTCCTTCCTTAACCGCGAGGTCCTGCAGCGCTTTCGCG
GTTTTGGCGGGGTCCGCATCGAGGAGGACGTCGTGGTGACTGACAGCGGCATAGAGCTGCTGACCTGCGTGCCCCGCACTGTGGAAGAGA
TTGAAGCATGCATGGCAGGCTGTGACAAGGCCTTTACCCCCTTCTCTGGCCCCAAGTAGAGCCAGCCAGAAATCCCAGCGCACCTGGGGG
CCTGGCCTTGCAACCTCTTTTCGTGATGGGCAGCCTGCTGGTCAGCACTCCAGTAGCGAGAGACGGCACCCAGAATCAGATCCCAGCTTC
GGCATTTGATCAGACCAAACAGTGCTGTTTCCCGGGGAGGAAACACTTTTTTAATTACCCTTTTGCAGGCTCCCACCTTTAATCTGTTTT
ATACCTTGCTTATTAAATGAGCGACTTAAAATGATTGAAAATAATGCTGTTCTTTAGTAGCAACTAAAATGTGTCTTGCTGTCATTTATA
TTCCTTTTCCCAGGAAAGAAGCATTTCTGATACTTTCTGTCAAAAATCAATATGCAGAATGGCATTTGCAATAAAAGGTTTCCTAAAATG
GTC

>11173_11173_1_C19orf25-PEPD_C19orf25_chr19_1478772_ENST00000585675_PEPD_chr19_33882385_ENST00000244137_length(amino acids)=231AA_BP=1
MALLGAREGGKGLVTACHACFNLFHSAGHAGQQLYAAVSHHDVLLDADPAKTAKALQDLAVKEGGAGRVRQGLIQEVVDEVDARLHGEHH
AWLQVPCSAQAPQAGLVDALHALWVASHVVHVNAQEVAKPVRHKHGPQVSLDHGVHAAAQDAHVGQLLQVDAVSQAVHVRPPDTFRGQDG
EHWILCRRTPHILQDLLHRGGRWAGGQQHALLCLGAHLPVAGLFPPGRGTR

--------------------------------------------------------------
>11173_11173_2_C19orf25-PEPD_C19orf25_chr19_1478772_ENST00000585675_PEPD_chr19_33882385_ENST00000397032_length(transcript)=1053nt_BP=174nt
TTTCGGGTCCCGCGCCCAGGTGGGAAGAGGCCGGCGACTGGGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAG
CGCCCCCCACGGTGGAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGTGTCT
GGTGGCCTGACATGCACCGCCTGGCTGACCGCATCCACCTGGAGGAGCTGGCCCACATGGGCATCCTGAGCGGCAGCGTGGACGCCATGG
TCCAGGCTCACCTGGGGGCCGTGTTTATGCCTCACGGGCTTGGCCACTTCCTGGGCATTGACGTGCACGACGTGGGAGGCTACCCAGAGG
GCGTGGAGCGCATCGACGAGCCCGGCCTGCGGAGCCTGCGCACTGCACGGCACCTGCAGCCAGGCATGGTGCTCACCGTGGAGCCGGGCA
TCTACTTCATCGACCACCTCCTGGATGAGGCCCTGGCGGACCCGGCCCGCGCCTCCTTCCTTAACCGCGAGGTCCTGCAGCGCTTTCGCG
GTTTTGGCGGGGTCCGCATCGAGGAGGACGTCGTGGTGACTGACAGCGGCATAGAGCTGCTGACCTGCGTGCCCCGCACTGTGGAAGAGA
TTGAAGCATGCATGGCAGGCTGTGACAAGGCCTTTACCCCCTTCTCTGGCCCCAAGTAGAGCCAGCCAGAAATCCCAGCGCACCTGGGGG
CCTGGCCTTGCAACCTCTTTTCGTGATGGGCAGCCTGCTGGTCAGCACTCCAGTAGCGAGAGACGGCACCCAGAATCAGATCCCAGCTTC
GGCATTTGATCAGACCAAACAGTGCTGTTTCCCGGGGAGGAAACACTTTTTTAATTACCCTTTTGCAGGCTCCCACCTTTAATCTGTTTT
ATACCTTGCTTATTAAATGAGCGACTTAAAATGATTGAAAATAATGCTGTTCTTTAGTAGCAACTAAAATGTGTCTTGCTGTCATTTATA
TTCCTTTTCCCAGGAAAGAAGCATTTCTGATACTTTCTGTCAAAAATCAATATGCAGAATGGC

>11173_11173_2_C19orf25-PEPD_C19orf25_chr19_1478772_ENST00000585675_PEPD_chr19_33882385_ENST00000397032_length(amino acids)=231AA_BP=1
MALLGAREGGKGLVTACHACFNLFHSAGHAGQQLYAAVSHHDVLLDADPAKTAKALQDLAVKEGGAGRVRQGLIQEVVDEVDARLHGEHH
AWLQVPCSAQAPQAGLVDALHALWVASHVVHVNAQEVAKPVRHKHGPQVSLDHGVHAAAQDAHVGQLLQVDAVSQAVHVRPPDTFRGQDG
EHWILCRRTPHILQDLLHRGGRWAGGQQHALLCLGAHLPVAGLFPPGRGTR

--------------------------------------------------------------
>11173_11173_3_C19orf25-PEPD_C19orf25_chr19_1478772_ENST00000585675_PEPD_chr19_33882385_ENST00000436370_length(transcript)=1009nt_BP=174nt
TTTCGGGTCCCGCGCCCAGGTGGGAAGAGGCCGGCGACTGGGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAG
CGCCCCCCACGGTGGAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGTGTCT
GGTGGCCTGACATGCACCGCCTGGCTGACCGCATCCACCTGGAGGAGCTGGCCCACATGGGCATCCTGAGCGGCAGCGTGGACGCCATGG
TCCAGGCTCACCTGGGGGCCGTGTTTATGCCTCACGGGCTTGGCCACTTCCTGGGCATTGACGTGCACGACGTGGGAGGCTACCCAGAGG
GCGTGGAGCGCATCGACGAGCCCGGCCTGCGGAGCCTGCGCACTGCACGGCACCTGCAGCCAGGCATGGTGCTCACCGTGGAGCCGGGCA
TCTACTTCATCGACCACCTCCTGGATGAGGCCCTGGCGGACCCGGCCCGCGCCTCCTTCCTTAACCGCGAGGTCCTGCAGCGCTTTCGCG
GTTTTGGCGGGGTCCGCATCGAGGAGGACGTCGTGGTGACTGACAGCGGCATAGAGCTGCTGACCTGCGTGCCCCGCACTGTGGAAGAGA
TTGAAGCATGCATGGCAGGCTGTGACAAGGCCTTTACCCCCTTCTCTGGCCCCAAGTAGAGCCAGCCAGAAATCCCAGCGCACCTGGGGG
CCTGGCCTTGCAACCTCTTTTCGTGATGGGCAGCCTGCTGGTCAGCACTCCAGTAGCGAGAGACGGCACCCAGAATCAGATCCCAGCTTC
GGCATTTGATCAGACCAAACAGTGCTGTTTCCCGGGGAGGAAACACTTTTTTAATTACCCTTTTGCAGGCTCCCACCTTTAATCTGTTTT
ATACCTTGCTTATTAAATGAGCGACTTAAAATGATTGAAAATAATGCTGTTCTTTAGTAGCAACTAAAATGTGTCTTGCTGTCATTTATA
TTCCTTTTCCCAGGAAAGA

>11173_11173_3_C19orf25-PEPD_C19orf25_chr19_1478772_ENST00000585675_PEPD_chr19_33882385_ENST00000436370_length(amino acids)=214AA_BP=39
MGSKAKKRVLLPTRPAPPTVEQILEDVRGAPAEDPVFTILAPEGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLG
HFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTD
SGIELLTCVPRTVEEIEACMAGCDKAFTPFSGPK

--------------------------------------------------------------
>11173_11173_4_C19orf25-PEPD_C19orf25_chr19_1478773_ENST00000585675_PEPD_chr19_33882385_ENST00000244137_length(transcript)=1083nt_BP=174nt
TTTCGGGTCCCGCGCCCAGGTGGGAAGAGGCCGGCGACTGGGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAG
CGCCCCCCACGGTGGAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGTGTCT
GGTGGCCTGACATGCACCGCCTGGCTGACCGCATCCACCTGGAGGAGCTGGCCCACATGGGCATCCTGAGCGGCAGCGTGGACGCCATGG
TCCAGGCTCACCTGGGGGCCGTGTTTATGCCTCACGGGCTTGGCCACTTCCTGGGCATTGACGTGCACGACGTGGGAGGCTACCCAGAGG
GCGTGGAGCGCATCGACGAGCCCGGCCTGCGGAGCCTGCGCACTGCACGGCACCTGCAGCCAGGCATGGTGCTCACCGTGGAGCCGGGCA
TCTACTTCATCGACCACCTCCTGGATGAGGCCCTGGCGGACCCGGCCCGCGCCTCCTTCCTTAACCGCGAGGTCCTGCAGCGCTTTCGCG
GTTTTGGCGGGGTCCGCATCGAGGAGGACGTCGTGGTGACTGACAGCGGCATAGAGCTGCTGACCTGCGTGCCCCGCACTGTGGAAGAGA
TTGAAGCATGCATGGCAGGCTGTGACAAGGCCTTTACCCCCTTCTCTGGCCCCAAGTAGAGCCAGCCAGAAATCCCAGCGCACCTGGGGG
CCTGGCCTTGCAACCTCTTTTCGTGATGGGCAGCCTGCTGGTCAGCACTCCAGTAGCGAGAGACGGCACCCAGAATCAGATCCCAGCTTC
GGCATTTGATCAGACCAAACAGTGCTGTTTCCCGGGGAGGAAACACTTTTTTAATTACCCTTTTGCAGGCTCCCACCTTTAATCTGTTTT
ATACCTTGCTTATTAAATGAGCGACTTAAAATGATTGAAAATAATGCTGTTCTTTAGTAGCAACTAAAATGTGTCTTGCTGTCATTTATA
TTCCTTTTCCCAGGAAAGAAGCATTTCTGATACTTTCTGTCAAAAATCAATATGCAGAATGGCATTTGCAATAAAAGGTTTCCTAAAATG
GTC

>11173_11173_4_C19orf25-PEPD_C19orf25_chr19_1478773_ENST00000585675_PEPD_chr19_33882385_ENST00000244137_length(amino acids)=231AA_BP=1
MALLGAREGGKGLVTACHACFNLFHSAGHAGQQLYAAVSHHDVLLDADPAKTAKALQDLAVKEGGAGRVRQGLIQEVVDEVDARLHGEHH
AWLQVPCSAQAPQAGLVDALHALWVASHVVHVNAQEVAKPVRHKHGPQVSLDHGVHAAAQDAHVGQLLQVDAVSQAVHVRPPDTFRGQDG
EHWILCRRTPHILQDLLHRGGRWAGGQQHALLCLGAHLPVAGLFPPGRGTR

--------------------------------------------------------------
>11173_11173_5_C19orf25-PEPD_C19orf25_chr19_1478773_ENST00000585675_PEPD_chr19_33882385_ENST00000397032_length(transcript)=1053nt_BP=174nt
TTTCGGGTCCCGCGCCCAGGTGGGAAGAGGCCGGCGACTGGGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAG
CGCCCCCCACGGTGGAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGTGTCT
GGTGGCCTGACATGCACCGCCTGGCTGACCGCATCCACCTGGAGGAGCTGGCCCACATGGGCATCCTGAGCGGCAGCGTGGACGCCATGG
TCCAGGCTCACCTGGGGGCCGTGTTTATGCCTCACGGGCTTGGCCACTTCCTGGGCATTGACGTGCACGACGTGGGAGGCTACCCAGAGG
GCGTGGAGCGCATCGACGAGCCCGGCCTGCGGAGCCTGCGCACTGCACGGCACCTGCAGCCAGGCATGGTGCTCACCGTGGAGCCGGGCA
TCTACTTCATCGACCACCTCCTGGATGAGGCCCTGGCGGACCCGGCCCGCGCCTCCTTCCTTAACCGCGAGGTCCTGCAGCGCTTTCGCG
GTTTTGGCGGGGTCCGCATCGAGGAGGACGTCGTGGTGACTGACAGCGGCATAGAGCTGCTGACCTGCGTGCCCCGCACTGTGGAAGAGA
TTGAAGCATGCATGGCAGGCTGTGACAAGGCCTTTACCCCCTTCTCTGGCCCCAAGTAGAGCCAGCCAGAAATCCCAGCGCACCTGGGGG
CCTGGCCTTGCAACCTCTTTTCGTGATGGGCAGCCTGCTGGTCAGCACTCCAGTAGCGAGAGACGGCACCCAGAATCAGATCCCAGCTTC
GGCATTTGATCAGACCAAACAGTGCTGTTTCCCGGGGAGGAAACACTTTTTTAATTACCCTTTTGCAGGCTCCCACCTTTAATCTGTTTT
ATACCTTGCTTATTAAATGAGCGACTTAAAATGATTGAAAATAATGCTGTTCTTTAGTAGCAACTAAAATGTGTCTTGCTGTCATTTATA
TTCCTTTTCCCAGGAAAGAAGCATTTCTGATACTTTCTGTCAAAAATCAATATGCAGAATGGC

>11173_11173_5_C19orf25-PEPD_C19orf25_chr19_1478773_ENST00000585675_PEPD_chr19_33882385_ENST00000397032_length(amino acids)=231AA_BP=1
MALLGAREGGKGLVTACHACFNLFHSAGHAGQQLYAAVSHHDVLLDADPAKTAKALQDLAVKEGGAGRVRQGLIQEVVDEVDARLHGEHH
AWLQVPCSAQAPQAGLVDALHALWVASHVVHVNAQEVAKPVRHKHGPQVSLDHGVHAAAQDAHVGQLLQVDAVSQAVHVRPPDTFRGQDG
EHWILCRRTPHILQDLLHRGGRWAGGQQHALLCLGAHLPVAGLFPPGRGTR

--------------------------------------------------------------
>11173_11173_6_C19orf25-PEPD_C19orf25_chr19_1478773_ENST00000585675_PEPD_chr19_33882385_ENST00000436370_length(transcript)=1009nt_BP=174nt
TTTCGGGTCCCGCGCCCAGGTGGGAAGAGGCCGGCGACTGGGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAG
CGCCCCCCACGGTGGAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGTGTCT
GGTGGCCTGACATGCACCGCCTGGCTGACCGCATCCACCTGGAGGAGCTGGCCCACATGGGCATCCTGAGCGGCAGCGTGGACGCCATGG
TCCAGGCTCACCTGGGGGCCGTGTTTATGCCTCACGGGCTTGGCCACTTCCTGGGCATTGACGTGCACGACGTGGGAGGCTACCCAGAGG
GCGTGGAGCGCATCGACGAGCCCGGCCTGCGGAGCCTGCGCACTGCACGGCACCTGCAGCCAGGCATGGTGCTCACCGTGGAGCCGGGCA
TCTACTTCATCGACCACCTCCTGGATGAGGCCCTGGCGGACCCGGCCCGCGCCTCCTTCCTTAACCGCGAGGTCCTGCAGCGCTTTCGCG
GTTTTGGCGGGGTCCGCATCGAGGAGGACGTCGTGGTGACTGACAGCGGCATAGAGCTGCTGACCTGCGTGCCCCGCACTGTGGAAGAGA
TTGAAGCATGCATGGCAGGCTGTGACAAGGCCTTTACCCCCTTCTCTGGCCCCAAGTAGAGCCAGCCAGAAATCCCAGCGCACCTGGGGG
CCTGGCCTTGCAACCTCTTTTCGTGATGGGCAGCCTGCTGGTCAGCACTCCAGTAGCGAGAGACGGCACCCAGAATCAGATCCCAGCTTC
GGCATTTGATCAGACCAAACAGTGCTGTTTCCCGGGGAGGAAACACTTTTTTAATTACCCTTTTGCAGGCTCCCACCTTTAATCTGTTTT
ATACCTTGCTTATTAAATGAGCGACTTAAAATGATTGAAAATAATGCTGTTCTTTAGTAGCAACTAAAATGTGTCTTGCTGTCATTTATA
TTCCTTTTCCCAGGAAAGA

>11173_11173_6_C19orf25-PEPD_C19orf25_chr19_1478773_ENST00000585675_PEPD_chr19_33882385_ENST00000436370_length(amino acids)=214AA_BP=39
MGSKAKKRVLLPTRPAPPTVEQILEDVRGAPAEDPVFTILAPEGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLG
HFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTD
SGIELLTCVPRTVEEIEACMAGCDKAFTPFSGPK

--------------------------------------------------------------

Top

Fusion Gene PPI Analysis for C19orf25-PEPD


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

Related Drugs for C19orf25-PEPD


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

Related Diseases for C19orf25-PEPD


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneC0268532Deficiency of prolidase9CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
TgeneC0011860Diabetes Mellitus, Non-Insulin-Dependent1CTD_human
TgeneC0019209Hepatomegaly1CTD_human
TgeneC0035242Respiratory Tract Diseases1CTD_human
TgeneC0037299Skin Ulcer1CTD_human
TgeneC0038002Splenomegaly1CTD_human
TgeneC0353676Organophosphorus Poisoning1CTD_human
TgeneC0700359Organophosphate poisoning1CTD_human
TgeneC3494247Organothiophosphonate Poisoning1CTD_human
TgeneC3494248Organothiophosphate Poisoning1CTD_human
TgeneC3714514Infection1CTD_human