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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:EEF1A1-COL3A1 (FusionGDB2 ID:HG1915TG1281) |
Fusion Gene Summary for EEF1A1-COL3A1 |
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Fusion gene information | Fusion gene name: EEF1A1-COL3A1 | Fusion gene ID: hg1915tg1281 | Hgene | Tgene | Gene symbol | EEF1A1 | COL3A1 | Gene ID | 1915 | 1281 |
Gene name | eukaryotic translation elongation factor 1 alpha 1 | collagen type III alpha 1 chain | |
Synonyms | CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|LENG7|PTI1|eEF1A-1 | EDS4A|EDSVASC|PMGEDSV | |
Cytomap | ('EEF1A1')('COL3A1') 6q13 | 2q32.2 | |
Type of gene | protein-coding | protein-coding | |
Description | elongation factor 1-alpha 1CTCL tumor antigenEF-1-alpha-1EF1a-like proteincervical cancer suppressor 3elongation factor 1 alpha subunitelongation factor Tuepididymis secretory sperm binding proteineukaryotic elongation factor 1 A-1eukaryotic tran | collagen alpha-1(III) chainEhlers-Danlos syndrome type IV, autosomal dominantalpha-1 type III collagenalpha1 (III) collagencollagen, fetalcollagen, type III, alpha 1 | |
Modification date | 20200327 | 20200313 | |
UniProtAcc | . | P02461 | |
Ensembl transtripts involved in fusion gene | ENST00000309268, ENST00000316292, ENST00000331523, ENST00000491404, | ||
Fusion gene scores | * DoF score | 24 X 34 X 12=9792 | 34 X 39 X 8=10608 |
# samples | 38 | 43 | |
** MAII score | log2(38/9792*10)=-4.6875322343617 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(43/10608*10)=-4.62467221052313 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: EEF1A1 [Title/Abstract] AND COL3A1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | EEF1A1(74228077)-COL3A1(189872852), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | EEF1A1-COL3A1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. EEF1A1-COL3A1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. EEF1A1-COL3A1 seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF. EEF1A1-COL3A1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. EEF1A1-COL3A1 seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. EEF1A1-COL3A1 seems lost the major protein functional domain in Tgene partner, which is a CGC due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | EEF1A1 | GO:0071364 | cellular response to epidermal growth factor stimulus | 9852145 |
Hgene | EEF1A1 | GO:1900022 | regulation of D-erythro-sphingosine kinase activity | 18263879 |
Tgene | COL3A1 | GO:0007160 | cell-matrix adhesion | 16912226 |
Tgene | COL3A1 | GO:0007179 | transforming growth factor beta receptor signaling pathway | 16360482 |
Tgene | COL3A1 | GO:0009314 | response to radiation | 14736764 |
Tgene | COL3A1 | GO:0018149 | peptide cross-linking | 16754721 |
Tgene | COL3A1 | GO:0034097 | response to cytokine | 9076960|16360482 |
Tgene | COL3A1 | GO:0042060 | wound healing | 1466622 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-E2-A1B1-01A | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + |
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Fusion Gene ORF analysis for EEF1A1-COL3A1 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000309268 | ENST00000304636 | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + |
Frame-shift | ENST00000316292 | ENST00000317840 | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + |
Frame-shift | ENST00000331523 | ENST00000304636 | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + |
In-frame | ENST00000309268 | ENST00000317840 | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + |
In-frame | ENST00000316292 | ENST00000304636 | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + |
In-frame | ENST00000331523 | ENST00000317840 | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + |
intron-3CDS | ENST00000491404 | ENST00000304636 | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + |
intron-3CDS | ENST00000491404 | ENST00000317840 | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000316292 | EEF1A1 | chr6 | 74228077 | - | ENST00000304636 | COL3A1 | chr2 | 189872852 | + | 3885 | 2021 | 992 | 2023 | 343 |
ENST00000309268 | EEF1A1 | chr6 | 74228077 | - | ENST00000317840 | COL3A1 | chr2 | 189872852 | + | 3512 | 1648 | 619 | 1650 | 343 |
ENST00000331523 | EEF1A1 | chr6 | 74228077 | - | ENST00000317840 | COL3A1 | chr2 | 189872852 | + | 3138 | 1274 | 245 | 1276 | 343 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000316292 | ENST00000304636 | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + | 0.000406032 | 0.99959403 |
ENST00000309268 | ENST00000317840 | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + | 0.00046004 | 0.99954 |
ENST00000331523 | ENST00000317840 | EEF1A1 | chr6 | 74228077 | - | COL3A1 | chr2 | 189872852 | + | 0.000347327 | 0.9996526 |
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Fusion Genomic Features for EEF1A1-COL3A1 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for EEF1A1-COL3A1 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr6:74228077/chr2:189872852) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | COL3A1 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Collagen type III occurs in most soft connective tissues along with type I collagen. Involved in regulation of cortical development. Is the major ligand of ADGRG1 in the developing brain and binding to ADGRG1 inhibits neuronal migration and activates the RhoA pathway by coupling ADGRG1 to GNA13 and possibly GNA12. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000309268 | - | 6 | 8 | 5_242 | 343 | 463.0 | Domain | Note=tr-type G |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000316292 | - | 5 | 7 | 5_242 | 343 | 463.0 | Domain | Note=tr-type G |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000331523 | - | 6 | 8 | 5_242 | 343 | 463.0 | Domain | Note=tr-type G |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000309268 | - | 6 | 8 | 91_95 | 343 | 463.0 | Nucleotide binding | GTP |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000316292 | - | 5 | 7 | 91_95 | 343 | 463.0 | Nucleotide binding | GTP |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000331523 | - | 6 | 8 | 91_95 | 343 | 463.0 | Nucleotide binding | GTP |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000309268 | - | 6 | 8 | 14_21 | 343 | 463.0 | Region | G1 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000309268 | - | 6 | 8 | 153_156 | 343 | 463.0 | Region | G4 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000309268 | - | 6 | 8 | 194_196 | 343 | 463.0 | Region | G5 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000309268 | - | 6 | 8 | 70_74 | 343 | 463.0 | Region | G2 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000309268 | - | 6 | 8 | 91_94 | 343 | 463.0 | Region | G3 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000316292 | - | 5 | 7 | 14_21 | 343 | 463.0 | Region | G1 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000316292 | - | 5 | 7 | 153_156 | 343 | 463.0 | Region | G4 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000316292 | - | 5 | 7 | 194_196 | 343 | 463.0 | Region | G5 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000316292 | - | 5 | 7 | 70_74 | 343 | 463.0 | Region | G2 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000316292 | - | 5 | 7 | 91_94 | 343 | 463.0 | Region | G3 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000331523 | - | 6 | 8 | 14_21 | 343 | 463.0 | Region | G1 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000331523 | - | 6 | 8 | 153_156 | 343 | 463.0 | Region | G4 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000331523 | - | 6 | 8 | 194_196 | 343 | 463.0 | Region | G5 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000331523 | - | 6 | 8 | 70_74 | 343 | 463.0 | Region | G2 |
Hgene | EEF1A1 | chr6:74228077 | chr2:189872852 | ENST00000331523 | - | 6 | 8 | 91_94 | 343 | 463.0 | Region | G3 |
Tgene | COL3A1 | chr6:74228077 | chr2:189872852 | ENST00000304636 | 0 | 51 | 1232_1466 | 0 | 1467.0 | Domain | Fibrillar collagen NC1 | |
Tgene | COL3A1 | chr6:74228077 | chr2:189872852 | ENST00000304636 | 0 | 51 | 30_89 | 0 | 1467.0 | Domain | VWFC | |
Tgene | COL3A1 | chr6:74228077 | chr2:189872852 | ENST00000304636 | 0 | 51 | 1197_1205 | 0 | 1467.0 | Region | Note=Nonhelical region (C-terminal) | |
Tgene | COL3A1 | chr6:74228077 | chr2:189872852 | ENST00000304636 | 0 | 51 | 149_167 | 0 | 1467.0 | Region | Note=Nonhelical region (N-terminal) | |
Tgene | COL3A1 | chr6:74228077 | chr2:189872852 | ENST00000304636 | 0 | 51 | 168_1196 | 0 | 1467.0 | Region | Note=Triple-helical region |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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Fusion Gene Sequence for EEF1A1-COL3A1 |
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>25023_25023_1_EEF1A1-COL3A1_EEF1A1_chr6_74228077_ENST00000309268_COL3A1_chr2_189872852_ENST00000317840_length(transcript)=3512nt_BP=1648nt CGCAGAGGAAGACGCTCTAGGGATTTGTCCCGGACTAGCGAGATGGCAAGGCTGAGGACGGGAGGCTGATTGAGAGGCGAAGGTACACCC TAATCTCAATACAACCTTTGGAGCTAAGCCAGCAATGGTAGAGGGAAGATTCTGCACGTCCCTTCCAGGCGGCCTCCCCGTCACCACCCC CCCCAACCCGCCCCGACCGGAGCTGAGAGTAATTCATACAAAAGGACTCGCCCCTGCCTTGGGGAATCCCAGGGACCGTCGTTAAACTCC CACTAACGTAGAACCCAGAGATCGCTGCGTTCCCGCCCCCTCACCCGCCCGCTCTCGTCATCACTGAGGTGGAGAAGAGCATGCGTGAGG CTCCGGTGCCCGTCAGTGGGCAGAGCGCACATCGCCCACAGTCCCCGAGAAGTTGGGGGGAGGGGTCGGCAATTGAACCGGTGCCTAGAG AAGGTGGCGCGGGGTAAACTGGGAAAGTGATGTCGTGTACTGGCTCCGCCTTTTTCCCGAGGGTGGGGGAGAACCGTATATAAGTGCAGT AGTCGCCGTGAACGTTCTTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTGAAAACTACCCCTAAAAGCCAAAATGGGAAAGGA AAAGACTCATATCAACATTGTCGTCATTGGACACGTAGATTCGGGCAAGTCCACCACTACTGGCCATCTGATCTATAAATGCGGTGGCAT CGACAAAAGAACCATTGAAAAATTTGAGAAGGAGGCTGCTGAGATGGGAAAGGGCTCCTTCAAGTATGCCTGGGTCTTGGATAAACTGAA AGCTGAGCGTGAACGTGGTATCACCATTGATATCTCCTTGTGGAAATTTGAGACCAGCAAGTACTATGTGACTATCATTGATGCCCCAGG ACACAGAGACTTTATCAAAAACATGATTACAGGGACATCTCAGGCTGACTGTGCTGTCCTGATTGTTGCTGCTGGTGTTGGTGAATTTGA AGCTGGTATCTCCAAGAATGGGCAGACCCGAGAGCATGCCCTTCTGGCTTACACACTGGGTGTGAAACAACTAATTGTCGGTGTTAACAA AATGGATTCCACTGAGCCACCCTACAGCCAGAAGAGATATGAGGAAATTGTTAAGGAAGTCAGCACTTACATTAAGAAAATTGGCTACAA CCCCGACACAGTAGCATTTGTGCCAATTTCTGGTTGGAATGGTGACAACATGCTGGAGCCAAGTGCTAACATGCCTTGGTTCAAGGGATG GAAAGTCACCCGTAAGGATGGCAATGCCAGTGGAACCACGCTGCTTGAGGCTCTGGACTGCATCCTACCACCAACTCGTCCAACTGACAA GCCCTTGCGCCTGCCTCTCCAGGATGTCTACAAAATTGGTGGTATTGGTACTGTTCCTGTTGGCCGAGTGGAGACTGGTGTTCTCAAACC CGGTATGGTGGTCACCTTTGCTCCAGTCAACGTTACAACGGAAGTAAAATCTGTCGAAATGCACCATGAAGCTTTGAGTGAAGCTCTTCC TGGGGACAATGTGGGCTTCAATGTCAAGAATGTGTCTGTCAAGGATGTTCGTCGTGGCAACGTTGCTGGTGACAGCAAAAATGACCCACC AATGGAAGCAGCTGGCTTCACTGCTCAGTGAAAGAGGATCTGAGGGCTCCCCAGGCCACCCAGGGCAACCAGGCCCTCCTGGACCTCCTG GTGCCCCTGGTCCTTGCTGTGGTGGTGTTGGAGCCGCTGCCATTGCTGGGATTGGAGGTGAAAAAGCTGGCGGTTTTGCCCCGTATTATG GAGATGAACCAATGGATTTCAAAATCAACACCGATGAGATTATGACTTCACTCAAGTCTGTTAATGGACAAATAGAAAGCCTCATTAGTC CTGATGGTTCTCGTAAAAACCCCGCTAGAAACTGCAGAGACCTGAAATTCTGCCATCCTGAACTCAAGAGTGGAGAATACTGGGTTGACC CTAACCAAGGATGCAAATTGGATGCTATCAAGGTATTCTGTAATATGGAAACTGGGGAAACATGCATAAGTGCCAATCCTTTGAATGTTC CACGGAAACACTGGTGGACAGATTCTAGTGCTGAGAAGAAACACGTTTGGTTTGGAGAGTCCATGGATGGTGGTTTTCAGTTTAGCTACG GCAATCCTGAACTTCCTGAAGATGTCCTTGATGTGCATCTGGCATTCCTTCGACTTCTCTCCAGCCGAGCTTCCCAGAACATCACATATC ACTGCAAAAATAGCATTGCATACATGGATCAGGCCAGTGGAAATGTAAAGAAGGCCCTGAAGCTGATGGGGTCAAATGAAGGTGAATTCA AGGCTGAAGGAAATAGCAAATTCACCTACACAGTTCTGGAGGATGGTTGCACGAAACACACTGGGGAATGGAGCAAAACAGTCTTTGAAT ATCGAACACGCAAGGCTGTGAGACTACCTATTGTAGATATTGCACCCTATGACATTGGTGGTCCTGATCAAGAATTTGGTGTGGACGTTG GCCCTGTTTGCTTTTTATAAACCAAACTCTATCTGAAATCCCAACAAAAAAAATTTAACTCCATATGTGTTCCTCTTGTTCTAATCTTGT CAACCAGTGCAAGTGACCGACAAAATTCCAGTTATTTATTTCCAAAATGTTTGGAAACAGTATAATTTGACAAAGAAAAATGATACTTCT CTTTTTTTGCTGTTCCACCAAATACAATTCAAATGCTTTTTGTTTTATTTTTTTACCAATTCCAATTTCAAAATGTCTCAATGGTGCTAT AATAAATAAACTTCAACACTCTTTATGATAACAACACTGTGTTATATTCTTTGAATCCTAGCCCATCTGCAGAGCAATGACTGTGCTCAC CAGTAAAAGATAACCTTTCTTTCTGAAATAGTCAAATACGAAATTAGAAAAGCCCTCCCTATTTTAACTACCTCAACTGGTCAGAAACAC AGATTGTATTCTATGAGTCCCAGAAGATGAAAAAAATTTTATACGTTGATAAAACTTATAAATTTCATTGATTAATCTCCTGGAAGATTG GTTTAAAAAGAAAAGTGTAATGCAAGAATTTAAAGAAATATTTTTAAAGCCACAATTATTTTAATATTGGATATCAACTGCTTGTAAAGG TGCTCCTCTTTTTTCTTGTCATTGCTGGTCAAGATTACTAATATTTGGGAAGGCTTTAAAGACGCATGTTATGGTGCTAATGTACTTTCA CTTTTAAACTCTAGATCAGAATTGTTGACTTGCATTCAGAACATAAATGCACAAAATCTGTACATGTCTCCCATCAGAAAGATTCATTGG CATGCCACAGGGGATTCTCCTCCTTCATCCTGTAAAGGTCAACAATAAAAACCAAATTATGGGGCTGCTTTTGTCACACTAGCATAGAGA ATGTGTTGAAATTTAACTTTGTAAGCTTGTATGTGGTTGTTGATCTTTTTTTTCCTTACAGACACCCATAATAAAATATCATATTAAAAT >25023_25023_1_EEF1A1-COL3A1_EEF1A1_chr6_74228077_ENST00000309268_COL3A1_chr2_189872852_ENST00000317840_length(amino acids)=343AA_BP= MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTII DAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETG -------------------------------------------------------------- >25023_25023_2_EEF1A1-COL3A1_EEF1A1_chr6_74228077_ENST00000316292_COL3A1_chr2_189872852_ENST00000304636_length(transcript)=3885nt_BP=2021nt GTTTGCCGCCAGAACACAGGTAAGTGCCGTGTGTGGTTCCCGCGGGCCTGGCCTCTTTACGGGTTATGGCCCTTGCGTGCCTTGAATTAC TTCCACGCCCCTGGCTGCAGTACGTGATTCTTGATCCCGAGCTTCGGGTTGGAAGTGGGTGGGAGAGTTCGAGGCCTTGCGCTTAAGGAG CCCCTTCGCCTCGTGCTTGAGTTGAGGCCTGGCTTGGGCGCTGGGGCCGCCGCGTGCGAATCTGGTGGCACCTTCGCGCCTGTCTCGCTG CTTTCGATAAGTCTCTAGCCATTTAAAATTTTTGATGACCTGCTGCGACGCTTTTTTTCTGGCAAGATAGTCTTGTAAATGCGGGCCAAG ATCTGCACACTGGTATTTCGGTTTTTGGGGCCGCGGGCGGCGACGGGGCCCGTGCGTCCCAGCGCACATGTTCGGCGAGGCGGGGCCTGC GAGCGCGGCCACCGAGAATCGGACGGGGGTAGTCTCAAGCTGGCCGGCCTGCTCTGGTGCCTGGCCTCGCGCCGCCGTGTATCGCCCCGC CCTGGGCGGCAAGGCTGGCCCGGTCGGCACCAGTTGCGTGAGCGGAAAGATGGCCGCTTCCCGGCCCTGCTGCAGGGAGCTCAAAATGGA GGACGCGGCGCTCGGGAGAGCGGGCGGGTGAGTCACCCACACAAAGGAAAAGGGCCTTTCCGTCCTCAGCCGTCGCTTCATGTGACTCCA CGGAGTACCGGGCGCCGTCCAGGCACCTCGATTAGTTCTCGAGCTTTTGGAGTACGTCGTCTTTAGGTTGGGGGGAGGGGTTTTATGCGA TGGAGTTTCCCCACACTGAGTGGGTGGAGACTGAAGTTAGGCCAGCTTGGCACTTGATGTAATTCTCCTTGGAATTTGCCCTTTTTGAGT TTGGATCTTGGTTCATTCTCAAGCCTCAGACAGTGGTTCAAAGTTTTTTTCTTCCATTTCAGGTGTCGTGAAAACTACCCCTAAAAGCCA AAATGGGAAAGGAAAAGACTCATATCAACATTGTCGTCATTGGACACGTAGATTCGGGCAAGTCCACCACTACTGGCCATCTGATCTATA AATGCGGTGGCATCGACAAAAGAACCATTGAAAAATTTGAGAAGGAGGCTGCTGAGATGGGAAAGGGCTCCTTCAAGTATGCCTGGGTCT TGGATAAACTGAAAGCTGAGCGTGAACGTGGTATCACCATTGATATCTCCTTGTGGAAATTTGAGACCAGCAAGTACTATGTGACTATCA TTGATGCCCCAGGACACAGAGACTTTATCAAAAACATGATTACAGGGACATCTCAGGCTGACTGTGCTGTCCTGATTGTTGCTGCTGGTG TTGGTGAATTTGAAGCTGGTATCTCCAAGAATGGGCAGACCCGAGAGCATGCCCTTCTGGCTTACACACTGGGTGTGAAACAACTAATTG TCGGTGTTAACAAAATGGATTCCACTGAGCCACCCTACAGCCAGAAGAGATATGAGGAAATTGTTAAGGAAGTCAGCACTTACATTAAGA AAATTGGCTACAACCCCGACACAGTAGCATTTGTGCCAATTTCTGGTTGGAATGGTGACAACATGCTGGAGCCAAGTGCTAACATGCCTT GGTTCAAGGGATGGAAAGTCACCCGTAAGGATGGCAATGCCAGTGGAACCACGCTGCTTGAGGCTCTGGACTGCATCCTACCACCAACTC GTCCAACTGACAAGCCCTTGCGCCTGCCTCTCCAGGATGTCTACAAAATTGGTGGTATTGGTACTGTTCCTGTTGGCCGAGTGGAGACTG GTGTTCTCAAACCCGGTATGGTGGTCACCTTTGCTCCAGTCAACGTTACAACGGAAGTAAAATCTGTCGAAATGCACCATGAAGCTTTGA GTGAAGCTCTTCCTGGGGACAATGTGGGCTTCAATGTCAAGAATGTGTCTGTCAAGGATGTTCGTCGTGGCAACGTTGCTGGTGACAGCA AAAATGACCCACCAATGGAAGCAGCTGGCTTCACTGCTCAGTGAAAGAGGATCTGAGGGCTCCCCAGGCCACCCAGGGCAACCAGGCCCT CCTGGACCTCCTGGTGCCCCTGGTCCTTGCTGTGGTGGTGTTGGAGCCGCTGCCATTGCTGGGATTGGAGGTGAAAAAGCTGGCGGTTTT GCCCCGTATTATGGAGATGAACCAATGGATTTCAAAATCAACACCGATGAGATTATGACTTCACTCAAGTCTGTTAATGGACAAATAGAA AGCCTCATTAGTCCTGATGGTTCTCGTAAAAACCCCGCTAGAAACTGCAGAGACCTGAAATTCTGCCATCCTGAACTCAAGAGTGGAGAA TACTGGGTTGACCCTAACCAAGGATGCAAATTGGATGCTATCAAGGTATTCTGTAATATGGAAACTGGGGAAACATGCATAAGTGCCAAT CCTTTGAATGTTCCACGGAAACACTGGTGGACAGATTCTAGTGCTGAGAAGAAACACGTTTGGTTTGGAGAGTCCATGGATGGTGGTTTT CAGTTTAGCTACGGCAATCCTGAACTTCCTGAAGATGTCCTTGATGTGCATCTGGCATTCCTTCGACTTCTCTCCAGCCGAGCTTCCCAG AACATCACATATCACTGCAAAAATAGCATTGCATACATGGATCAGGCCAGTGGAAATGTAAAGAAGGCCCTGAAGCTGATGGGGTCAAAT GAAGGTGAATTCAAGGCTGAAGGAAATAGCAAATTCACCTACACAGTTCTGGAGGATGGTTGCACGAAACACACTGGGGAATGGAGCAAA ACAGTCTTTGAATATCGAACACGCAAGGCTGTGAGACTACCTATTGTAGATATTGCACCCTATGACATTGGTGGTCCTGATCAAGAATTT GGTGTGGACGTTGGCCCTGTTTGCTTTTTATAAACCAAACTCTATCTGAAATCCCAACAAAAAAAATTTAACTCCATATGTGTTCCTCTT GTTCTAATCTTGTCAACCAGTGCAAGTGACCGACAAAATTCCAGTTATTTATTTCCAAAATGTTTGGAAACAGTATAATTTGACAAAGAA AAATGATACTTCTCTTTTTTTGCTGTTCCACCAAATACAATTCAAATGCTTTTTGTTTTATTTTTTTACCAATTCCAATTTCAAAATGTC TCAATGGTGCTATAATAAATAAACTTCAACACTCTTTATGATAACAACACTGTGTTATATTCTTTGAATCCTAGCCCATCTGCAGAGCAA TGACTGTGCTCACCAGTAAAAGATAACCTTTCTTTCTGAAATAGTCAAATACGAAATTAGAAAAGCCCTCCCTATTTTAACTACCTCAAC TGGTCAGAAACACAGATTGTATTCTATGAGTCCCAGAAGATGAAAAAAATTTTATACGTTGATAAAACTTATAAATTTCATTGATTAATC TCCTGGAAGATTGGTTTAAAAAGAAAAGTGTAATGCAAGAATTTAAAGAAATATTTTTAAAGCCACAATTATTTTAATATTGGATATCAA CTGCTTGTAAAGGTGCTCCTCTTTTTTCTTGTCATTGCTGGTCAAGATTACTAATATTTGGGAAGGCTTTAAAGACGCATGTTATGGTGC TAATGTACTTTCACTTTTAAACTCTAGATCAGAATTGTTGACTTGCATTCAGAACATAAATGCACAAAATCTGTACATGTCTCCCATCAG AAAGATTCATTGGCATGCCACAGGGGATTCTCCTCCTTCATCCTGTAAAGGTCAACAATAAAAACCAAATTATGGGGCTGCTTTTGTCAC ACTAGCATAGAGAATGTGTTGAAATTTAACTTTGTAAGCTTGTATGTGGTTGTTGATCTTTTTTTTCCTTACAGACACCCATAATAAAAT >25023_25023_2_EEF1A1-COL3A1_EEF1A1_chr6_74228077_ENST00000316292_COL3A1_chr2_189872852_ENST00000304636_length(amino acids)=343AA_BP= MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTII DAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETG -------------------------------------------------------------- >25023_25023_3_EEF1A1-COL3A1_EEF1A1_chr6_74228077_ENST00000331523_COL3A1_chr2_189872852_ENST00000317840_length(transcript)=3138nt_BP=1274nt CGTTAAGGAGGCCCCCAGTCCCGACCCTTCGCCCCAAGCCCCTCGGGGTCCCCGGGCCTGGTACTCCTTGCCACACGGGAGGGGCGCGGA AGCCGGGGCGGAGGAGGAGCCAACCCCGGGCTGGGCTGAGACCCGCAGAGGAAGACGCTCTAGGGATTTGTCCCGGACTAGCGAGATGGC AAGGCTGAGGACGGGAGGCTGATTGAGAGGCGAAGGTGTCGTGAAAACTACCCCTAAAAGCCAAAATGGGAAAGGAAAAGACTCATATCA ACATTGTCGTCATTGGACACGTAGATTCGGGCAAGTCCACCACTACTGGCCATCTGATCTATAAATGCGGTGGCATCGACAAAAGAACCA TTGAAAAATTTGAGAAGGAGGCTGCTGAGATGGGAAAGGGCTCCTTCAAGTATGCCTGGGTCTTGGATAAACTGAAAGCTGAGCGTGAAC GTGGTATCACCATTGATATCTCCTTGTGGAAATTTGAGACCAGCAAGTACTATGTGACTATCATTGATGCCCCAGGACACAGAGACTTTA TCAAAAACATGATTACAGGGACATCTCAGGCTGACTGTGCTGTCCTGATTGTTGCTGCTGGTGTTGGTGAATTTGAAGCTGGTATCTCCA AGAATGGGCAGACCCGAGAGCATGCCCTTCTGGCTTACACACTGGGTGTGAAACAACTAATTGTCGGTGTTAACAAAATGGATTCCACTG AGCCACCCTACAGCCAGAAGAGATATGAGGAAATTGTTAAGGAAGTCAGCACTTACATTAAGAAAATTGGCTACAACCCCGACACAGTAG CATTTGTGCCAATTTCTGGTTGGAATGGTGACAACATGCTGGAGCCAAGTGCTAACATGCCTTGGTTCAAGGGATGGAAAGTCACCCGTA AGGATGGCAATGCCAGTGGAACCACGCTGCTTGAGGCTCTGGACTGCATCCTACCACCAACTCGTCCAACTGACAAGCCCTTGCGCCTGC CTCTCCAGGATGTCTACAAAATTGGTGGTATTGGTACTGTTCCTGTTGGCCGAGTGGAGACTGGTGTTCTCAAACCCGGTATGGTGGTCA CCTTTGCTCCAGTCAACGTTACAACGGAAGTAAAATCTGTCGAAATGCACCATGAAGCTTTGAGTGAAGCTCTTCCTGGGGACAATGTGG GCTTCAATGTCAAGAATGTGTCTGTCAAGGATGTTCGTCGTGGCAACGTTGCTGGTGACAGCAAAAATGACCCACCAATGGAAGCAGCTG GCTTCACTGCTCAGTGAAAGAGGATCTGAGGGCTCCCCAGGCCACCCAGGGCAACCAGGCCCTCCTGGACCTCCTGGTGCCCCTGGTCCT TGCTGTGGTGGTGTTGGAGCCGCTGCCATTGCTGGGATTGGAGGTGAAAAAGCTGGCGGTTTTGCCCCGTATTATGGAGATGAACCAATG GATTTCAAAATCAACACCGATGAGATTATGACTTCACTCAAGTCTGTTAATGGACAAATAGAAAGCCTCATTAGTCCTGATGGTTCTCGT AAAAACCCCGCTAGAAACTGCAGAGACCTGAAATTCTGCCATCCTGAACTCAAGAGTGGAGAATACTGGGTTGACCCTAACCAAGGATGC AAATTGGATGCTATCAAGGTATTCTGTAATATGGAAACTGGGGAAACATGCATAAGTGCCAATCCTTTGAATGTTCCACGGAAACACTGG TGGACAGATTCTAGTGCTGAGAAGAAACACGTTTGGTTTGGAGAGTCCATGGATGGTGGTTTTCAGTTTAGCTACGGCAATCCTGAACTT CCTGAAGATGTCCTTGATGTGCATCTGGCATTCCTTCGACTTCTCTCCAGCCGAGCTTCCCAGAACATCACATATCACTGCAAAAATAGC ATTGCATACATGGATCAGGCCAGTGGAAATGTAAAGAAGGCCCTGAAGCTGATGGGGTCAAATGAAGGTGAATTCAAGGCTGAAGGAAAT AGCAAATTCACCTACACAGTTCTGGAGGATGGTTGCACGAAACACACTGGGGAATGGAGCAAAACAGTCTTTGAATATCGAACACGCAAG GCTGTGAGACTACCTATTGTAGATATTGCACCCTATGACATTGGTGGTCCTGATCAAGAATTTGGTGTGGACGTTGGCCCTGTTTGCTTT TTATAAACCAAACTCTATCTGAAATCCCAACAAAAAAAATTTAACTCCATATGTGTTCCTCTTGTTCTAATCTTGTCAACCAGTGCAAGT GACCGACAAAATTCCAGTTATTTATTTCCAAAATGTTTGGAAACAGTATAATTTGACAAAGAAAAATGATACTTCTCTTTTTTTGCTGTT CCACCAAATACAATTCAAATGCTTTTTGTTTTATTTTTTTACCAATTCCAATTTCAAAATGTCTCAATGGTGCTATAATAAATAAACTTC AACACTCTTTATGATAACAACACTGTGTTATATTCTTTGAATCCTAGCCCATCTGCAGAGCAATGACTGTGCTCACCAGTAAAAGATAAC CTTTCTTTCTGAAATAGTCAAATACGAAATTAGAAAAGCCCTCCCTATTTTAACTACCTCAACTGGTCAGAAACACAGATTGTATTCTAT GAGTCCCAGAAGATGAAAAAAATTTTATACGTTGATAAAACTTATAAATTTCATTGATTAATCTCCTGGAAGATTGGTTTAAAAAGAAAA GTGTAATGCAAGAATTTAAAGAAATATTTTTAAAGCCACAATTATTTTAATATTGGATATCAACTGCTTGTAAAGGTGCTCCTCTTTTTT CTTGTCATTGCTGGTCAAGATTACTAATATTTGGGAAGGCTTTAAAGACGCATGTTATGGTGCTAATGTACTTTCACTTTTAAACTCTAG ATCAGAATTGTTGACTTGCATTCAGAACATAAATGCACAAAATCTGTACATGTCTCCCATCAGAAAGATTCATTGGCATGCCACAGGGGA TTCTCCTCCTTCATCCTGTAAAGGTCAACAATAAAAACCAAATTATGGGGCTGCTTTTGTCACACTAGCATAGAGAATGTGTTGAAATTT >25023_25023_3_EEF1A1-COL3A1_EEF1A1_chr6_74228077_ENST00000331523_COL3A1_chr2_189872852_ENST00000317840_length(amino acids)=343AA_BP= MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTII DAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETG -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for EEF1A1-COL3A1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for EEF1A1-COL3A1 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | COL3A1 | P02461 | DB00048 | Collagenase clostridium histolyticum | Binder | Biotech | Approved|Investigational |
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Related Diseases for EEF1A1-COL3A1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | EEF1A1 | C0007097 | Carcinoma | 1 | CTD_human |
Hgene | EEF1A1 | C0024623 | Malignant neoplasm of stomach | 1 | CTD_human |
Hgene | EEF1A1 | C0024667 | Animal Mammary Neoplasms | 1 | CTD_human |
Hgene | EEF1A1 | C0024668 | Mammary Neoplasms, Experimental | 1 | CTD_human |
Hgene | EEF1A1 | C0038356 | Stomach Neoplasms | 1 | CTD_human |
Hgene | EEF1A1 | C0205696 | Anaplastic carcinoma | 1 | CTD_human |
Hgene | EEF1A1 | C0205697 | Carcinoma, Spindle-Cell | 1 | CTD_human |
Hgene | EEF1A1 | C0205698 | Undifferentiated carcinoma | 1 | CTD_human |
Hgene | EEF1A1 | C0205699 | Carcinomatosis | 1 | CTD_human |
Hgene | EEF1A1 | C1257925 | Mammary Carcinoma, Animal | 1 | CTD_human |
Hgene | EEF1A1 | C1708349 | Hereditary Diffuse Gastric Cancer | 1 | CTD_human |
Tgene | C0268338 | Ehlers-Danlos Syndrome, Type IV | 43 | CLINGEN;CTD_human;GENOMICS_ENGLAND;UNIPROT | |
Tgene | C4707243 | Familial thoracic aortic aneurysm and aortic dissection | 10 | CLINGEN;GENOMICS_ENGLAND | |
Tgene | C0023890 | Liver Cirrhosis | 5 | CTD_human | |
Tgene | C0239946 | Fibrosis, Liver | 5 | CTD_human | |
Tgene | C0023893 | Liver Cirrhosis, Experimental | 2 | CTD_human | |
Tgene | C0162871 | Aortic Aneurysm, Abdominal | 2 | ORPHANET | |
Tgene | C1853365 | AORTIC ANEURYSM, FAMILIAL ABDOMINAL 1 | 2 | ORPHANET | |
Tgene | C2697932 | Loeys-Dietz Syndrome | 2 | GENOMICS_ENGLAND | |
Tgene | C0003504 | Aortic Valve Insufficiency | 1 | CTD_human | |
Tgene | C0005398 | Cholestasis, Extrahepatic | 1 | CTD_human | |
Tgene | C0015695 | Fatty Liver | 1 | CTD_human | |
Tgene | C0016059 | Fibrosis | 1 | CTD_human | |
Tgene | C0019193 | Hepatitis, Toxic | 1 | CTD_human | |
Tgene | C0020443 | Hypercholesterolemia | 1 | CTD_human | |
Tgene | C0020456 | Hyperglycemia | 1 | CTD_human | |
Tgene | C0020459 | Hyperinsulinism | 1 | CTD_human | |
Tgene | C0020538 | Hypertensive disease | 1 | CTD_human | |
Tgene | C0022548 | Keloid | 1 | CTD_human | |
Tgene | C0023891 | Liver Cirrhosis, Alcoholic | 1 | CTD_human | |
Tgene | C0023895 | Liver diseases | 1 | CTD_human | |
Tgene | C0027719 | Nephrosclerosis | 1 | CTD_human | |
Tgene | C0034069 | Pulmonary Fibrosis | 1 | CTD_human | |
Tgene | C0036341 | Schizophrenia | 1 | CTD_human | |
Tgene | C0038454 | Cerebrovascular accident | 1 | GENOMICS_ENGLAND | |
Tgene | C0041956 | Ureteral obstruction | 1 | CTD_human | |
Tgene | C0086565 | Liver Dysfunction | 1 | CTD_human | |
Tgene | C0149721 | Left Ventricular Hypertrophy | 1 | CTD_human | |
Tgene | C0238288 | Muscular Dystrophy, Facioscapulohumeral | 1 | CTD_human | |
Tgene | C0238590 | Acrogeria | 1 | ORPHANET | |
Tgene | C0338586 | Vertebral Artery Dissection | 1 | GENOMICS_ENGLAND | |
Tgene | C0406584 | Acrogeria, gottron type | 1 | ORPHANET | |
Tgene | C0553692 | Brain hemorrhage | 1 | GENOMICS_ENGLAND | |
Tgene | C0553980 | Endomyocardial Fibrosis | 1 | CTD_human | |
Tgene | C0860207 | Drug-Induced Liver Disease | 1 | CTD_human | |
Tgene | C0948008 | Ischemic stroke | 1 | GENOMICS_ENGLAND | |
Tgene | C1257963 | Endogenous Hyperinsulinism | 1 | CTD_human | |
Tgene | C1257964 | Exogenous Hyperinsulinism | 1 | CTD_human | |
Tgene | C1257965 | Compensatory Hyperinsulinemia | 1 | CTD_human | |
Tgene | C1262760 | Hepatitis, Drug-Induced | 1 | CTD_human | |
Tgene | C1623038 | Cirrhosis | 1 | CTD_human | |
Tgene | C1855520 | Hyperglycemia, Postprandial | 1 | CTD_human | |
Tgene | C1862932 | ANEURYSM, INTRACRANIAL BERRY, 1 (disorder) | 1 | ORPHANET | |
Tgene | C2711227 | Steatohepatitis | 1 | CTD_human | |
Tgene | C3658290 | Drug-Induced Acute Liver Injury | 1 | CTD_human | |
Tgene | C4277682 | Chemical and Drug Induced Liver Injury | 1 | CTD_human | |
Tgene | C4279912 | Chemically-Induced Liver Toxicity | 1 | CTD_human | |
Tgene | C4721507 | Alveolitis, Fibrosing | 1 | CTD_human |