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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:ARID2-SPATS1 (FusionGDB2 ID:HG196528TG221409) |
Fusion Gene Summary for ARID2-SPATS1 |
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Fusion gene information | Fusion gene name: ARID2-SPATS1 | Fusion gene ID: hg196528tg221409 | Hgene | Tgene | Gene symbol | ARID2 | SPATS1 | Gene ID | 196528 | 221409 |
Gene name | AT-rich interaction domain 2 | spermatogenesis associated serine rich 1 | |
Synonyms | BAF200|CSS6|p200 | DDIP|SPATA8|SRSP1 | |
Cytomap | ('ARID2')('SPATS1') 12q12 | 6p21.1 | |
Type of gene | protein-coding | protein-coding | |
Description | AT-rich interactive domain-containing protein 2ARID domain-containing protein 2AT rich interactive domain 2 (ARID, RFX-like)BRG1-associated factor 200zinc finger protein with activation potentialzipzap/p200 | spermatogenesis-associated serine-rich protein 1 | |
Modification date | 20200320 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000479608, ENST00000334344, ENST00000444670, ENST00000457135, ENST00000422737, | ||
Fusion gene scores | * DoF score | 17 X 9 X 12=1836 | 3 X 4 X 3=36 |
# samples | 17 | 4 | |
** MAII score | log2(17/1836*10)=-3.43295940727611 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/36*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: ARID2 [Title/Abstract] AND SPATS1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ARID2(46287504)-SPATS1(44336116), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | ARID2-SPATS1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ARID2-SPATS1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ARID2-SPATS1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ARID2-SPATS1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ARID2-SPATS1 seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF. ARID2-SPATS1 seems lost the major protein functional domain in Hgene partner, which is a epigenetic factor due to the frame-shifted ORF. ARID2-SPATS1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. ARID2-SPATS1 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF. ARID2-SPATS1 seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. ARID2-SPATS1 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ARID2 | GO:0006337 | nucleosome disassembly | 8895581 |
Hgene | ARID2 | GO:0008285 | negative regulation of cell proliferation | 26169693 |
Hgene | ARID2 | GO:0030336 | negative regulation of cell migration | 26169693 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BLCA | TCGA-E7-A7DV-01A | ARID2 | chr12 | 46287504 | - | SPATS1 | chr6 | 44336116 | + |
ChimerDB4 | BLCA | TCGA-E7-A7DV-01A | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + |
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Fusion Gene ORF analysis for ARID2-SPATS1 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000479608 | ENST00000288390 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + |
3UTR-3CDS | ENST00000479608 | ENST00000323108 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + |
Frame-shift | ENST00000334344 | ENST00000288390 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + |
Frame-shift | ENST00000334344 | ENST00000323108 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + |
Frame-shift | ENST00000444670 | ENST00000288390 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + |
Frame-shift | ENST00000444670 | ENST00000323108 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + |
Frame-shift | ENST00000457135 | ENST00000288390 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + |
Frame-shift | ENST00000457135 | ENST00000323108 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + |
In-frame | ENST00000422737 | ENST00000288390 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + |
In-frame | ENST00000422737 | ENST00000323108 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000422737 | ARID2 | chr12 | 46287504 | + | ENST00000323108 | SPATS1 | chr6 | 44336116 | + | 5821 | 5389 | 53 | 5353 | 1766 |
ENST00000422737 | ARID2 | chr12 | 46287504 | + | ENST00000288390 | SPATS1 | chr6 | 44336116 | + | 5822 | 5389 | 53 | 5353 | 1766 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000422737 | ENST00000323108 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + | 0.000816117 | 0.99918383 |
ENST00000422737 | ENST00000288390 | ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336116 | + | 0.000811247 | 0.9991887 |
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Fusion Genomic Features for ARID2-SPATS1 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336115 | + | 0.000231894 | 0.9997681 |
ARID2 | chr12 | 46287504 | + | SPATS1 | chr6 | 44336115 | + | 0.000231894 | 0.9997681 |
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Fusion Protein Features for ARID2-SPATS1 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:46287504/chr6:44336116) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ARID2 | chr12:46287504 | chr6:44336116 | ENST00000334344 | + | 20 | 21 | 793_1128 | 1787 | 1836.0 | Compositional bias | Note=Gln-rich |
Hgene | ARID2 | chr12:46287504 | chr6:44336116 | ENST00000334344 | + | 20 | 21 | 524_603 | 1787 | 1836.0 | DNA binding | RFX-type winged-helix |
Hgene | ARID2 | chr12:46287504 | chr6:44336116 | ENST00000334344 | + | 20 | 21 | 13_105 | 1787 | 1836.0 | Domain | ARID |
Hgene | ARID2 | chr12:46287504 | chr6:44336116 | ENST00000334344 | + | 20 | 21 | 313_317 | 1787 | 1836.0 | Motif | Note=LXXLL |
Hgene | ARID2 | chr12:46287504 | chr6:44336116 | ENST00000334344 | + | 20 | 21 | 1632_1657 | 1787 | 1836.0 | Zinc finger | Note=C2H2-type |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | SPATS1 | chr12:46287504 | chr6:44336116 | ENST00000288390 | 3 | 8 | 69_75 | 191 | 301.0 | Compositional bias | Note=Poly-Ser | |
Tgene | SPATS1 | chr12:46287504 | chr6:44336116 | ENST00000323108 | 4 | 9 | 69_75 | 191 | 301.0 | Compositional bias | Note=Poly-Ser |
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Fusion Gene Sequence for ARID2-SPATS1 |
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>6442_6442_1_ARID2-SPATS1_ARID2_chr12_46287504_ENST00000422737_SPATS1_chr6_44336116_ENST00000288390_length(transcript)=5822nt_BP=5389nt ACCACAGCAGAGGGTCGCCTTTTAAAAAAATCCCTGCGGTGGGTGGGAAGGAGCTGGATCTTCACGGTCTCTACACCAGAGTCACTACTT TAGGCGGATTCGCGAAGGTTTCTGAGAAGAATCAGTGGGGAGAAATTGTTGAAGAGTTCAACTTTCCCAGAAGTTGTTCTAACGCTGCCT TTGCTTTAAAACAGTATTACTTGCGTTACCTAGAAAAGTACGAGAAAGTTCATCATTTTGGGGAGGATGATGATGAGGTACCACCAGGCA ATCCAAAGCCACAGCTTCCTATTGGTGCAATTCCATCTTCCTACAATTACCAGCAACACAGTGTGTCGGATTATCTGCGTCAAAGTTATG GGCTGTCCATGGACTTTAATTCGCCAAATGATTATAATAAATTGGTGCTTTCACTGTTATCTGGACTCCCAAATGAAGTGGACTTTGCTA TTAACGTATGCACTCTCCTATCAAATGAAAGCAAGCACGTCATGCAACTTGAAAAAGATCCTAAAATCATCACTTTACTACTTGCTAATG CCGGGGTGTTTGACGACACTTTAGGATCCTTTTCCACTGTATTTGGAGAAGAATGGAAAGAGAAGACTGATAGAGACTTCGTTAAGTTTT GGAAAGACATCGTTGATGATAATGAAGTTCGTGACCTCATTTCTGACAGAAACAAGTCTCATGAAGGTACATCAGGAGAATGGATTTGGG AGTCTTTATTTCATCCACCTCGAAAGCTGGGCATTAACGATATTGAAGGACAGCGGGTACTTCAGATTGCAGTGATTTTGAGAAATCTTT CCTTTGAGGAGGGCAATGTTAAGCTCTTGGCAGCTAATCGTACCTGTCTTCGTTTCCTATTACTTTCTGCACATAGTCATTTTATTTCTT TAAGGCAATTAGGCCTTGACACATTAGGAAATATTGCAGCTGAGCTTTTACTGGACCCTGTTGATTTCAAAACTACTCATCTGATGTTTC ATACTGTTACAAAATGTCTAATGTCAAGGGATAGATTTTTAAAGATGAGAGGCATGGAAATTTTGGGAAATCTTTGCAAAGCAGAAGATA ATGGTGTTTTAATTTGTGAATATGTGGATCAGGATTCCTACAGAGAGATCATTTGTCATCTCACTTTACCTGATGTGCTGCTTGTAATCT CAACACTCGAGGTGCTATACATGCTCACGGAAATGGGAGATGTTGCTTGCACAAAAATTGCAAAAGTAGAAAAGAGCATAGACATGTTAG TGTGTCTGGTTTCTATGGATATTCAGATGTTTGGCCCTGATGCACTAGCTGCGGTAAAACTCATTGAACACCCAAGTTCCAGTCATCAAA TGTTATCTGAAATTAGGCCACAAGCTATAGAGCAAGTCCAAACCCAGACTCATGTAGCATCTGCCCCAGCTTCCAGAGCAGTTGTAGCGC AGCATGTTGCTCCACCTCCAGGAATAGTGGAAATAGATAGTGAGAAGTTTGCTTGTCAGTGGCTAAATGCTCATTTTGAAGTAAATCCAG ATTGTTCTGTTTCTCGAGCAGAAATGTATTCTGAATACCTCTCGACTTGCAGTAAATTAGCTCGTGGTGGAATCCTAACATCAACTGGAT TTTATAAATGTCTTAGAACGGTCTTTCCAAATCATACAGTGAAGAGAGTGGAGGATTCCAGTAGCAATGGGCAGGCACATATTCATGTGG TAGGAGTAAAACGGAGGGCTATACCACTTCCCATTCAGATGTACTATCAGCAGCAACCAGTTTCTACTTCTGTTGTTCGTGTTGATTCTG TTCCTGATGTATCTCCTGCTCCTTCACCTGCAGGAATCCCTCATGGATCACAAACCATAGGAAACCATTTTCAGAGGACTCCTGTTGCCA ACCAATCTTCAAATCTGACTGCAACACAAATGTCTTTTCCTGTACAAGGTGTTCATACTGTGGCACAAACTGTTTCAAGAATTCCACAAA ATCCTTCACCTCATACCCACCAGCAACAAAATGCTCCAGTGACTGTCATTCAAAGTAAAGCTCCAATTCCTTGTGAAGTTGTTAAGGCTA CAGTTATCCAGAATTCCATACCCCAGACAGGAGTTCCTGTTAGTATTGCTGTTGGAGGAGGACCTCCACAGAGTTCTGTTGTTCAGAATC ATAGTACAGGGCCACAACCTGTTACAGTTGTGAATTCTCAGACATTGCTTCACCATCCATCTGTAATTCCACAGCAGTCTCCATTACACA CAGTGGTACCAGGACAGATCCCTTCAGGCACTCCTGTTACAGTAATTCAACAAGCTGTCCCACAGAGTCATATGTTTGGCAGAGTACAGA ACATACCAGCATGTACTTCTACAGTTTCACAGGGTCAACAGTTAATCACCACATCACCCCAACCTGTGCAAACTTCATCTCAACAGACAT CAGCTGGTAGCCAGTCACAAGATACTGTTATCATAGCACCCCCACAGTATGTAACAACTTCTGCATCCAATATTGTCTCAGCAACTTCAG TACAGAATTTTCAGGTAGCTACAGGACAAATGGTTACTATTGCTGGTGTCCCAAGTCCACAAGCCTCAAGGGTAGGGTTTCAGAACATTG CACCAAAACCTCTCCCTTCTCAGCAAGTTTCATCTACAGTGGTACAGCAGCCTATTCAACAACCACAGCAGCCAACCCAACAAAGCGTAG TGATTGTAAGCCAGCCAGCTCAACAAGGTCAAACTTATGCACCAGCCATTCACCAAATTGTTCTTGCTAATCCAGCAGCTCTTCCAGCTG GTCAGACAGTTCAGCTAACTGGACAACCTAACATAACTCCATCTTCTTCACCATCACCTGTCCCAGCTACTAATAACCAAGTCCCTACTG CCATGTCGTCGTCCTCTACCCCTCAATCACAGGGACCACCTCCTACTGTCAGTCAAATGTTATCTGTGAAAAGGCAGCAACAGCAGCAAC ATTCACCAGCACCCCCACCACAGCAGGTACAAGTACAAGTTCAGCAGCCCCAACAAGTACAGATGCAAGTTCAACCTCAACAGTCGAATG CAGGAGTTGGTCAGCCTGCCTCTGGTGAGTCGAGTCTGATTAAACAGCTTCTGCTTCCGAAACGTGGTCCTTCAACACCAGGTGGTAAGC TTATTCTCCCAGCTCCACAGATTCCTCCCCCTAATAATGCAAGAGCTCCTAGCCCTCAGGTGGTCTATCAGGTGGCCAGTAACCAAGCCG CAGGTTTTGGAGTGCAGGGGCAAACTCCAGCTCAGCAGCTATTGGTTGGGCAGCAAAATGTTCAGTTGGTCCCAAGTGCAATGCCACCCT CAGGGGGAGTACAAACTGTGCCCATTTCGAACTTACAAATATTGCCAGGTCCACTGATCTCAAATAGCCCAGCAACCATTTTCCAAGGGA CTTCTGGCAACCAGGTAACCATAACAGTTGTGCCAAATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGAAATGCAACTCAGCTCATTG CTCCAGCAGGAATTACCATGAGCGGAACGCAGACAGGAGTTGGACTTCCAGTACAAACGCTTCCAGCCACTCAAGCATCTCCTGCTGGAC AATCATCATGTACTACTGCTACTCCCCCATTCAAAGGTGATAAAATAATTTGCCAAAAGGAGGAGGAAGCAAAGGAAGCAACAGGTTTAC ATGTTCATGAACGTAAAATTGAAGTCATGGAGAACCCGTCCTGCCGACGAGGAGCCACAAACACCAGCAATGGGGATACAAAGGAAAATG AAATGCATGTGGGAAGTCTTTTAAATGGGAGAAAGTACAGTGACTCAAGTCTACCTCCTTCAAACTCAGGGAAAATTCAAAGTGAGACTA ATCAGTGCTCACTAATCAGTAATGGGCCATCATTGGAATTAGGTGAGAATGGAGCATCTGGGAAACAGAACTCAGAACAAATAGACATGC AAGATATCAAAAGTGATTTGAGAAAACCGCTAGTTAATGGAATCTGTGATTTTGATAAAGGAGATGGTTCTCATTTAAGCAAAAACATTC CAAATCATAAAACTTCCAATCATGTAGGAAATGGTGAGATATCTCCAATGGAACCACAAGGGACTTTAGATATCACTCAGCAAGATACTG CCAAAGGTGATCAACTAGAAAGAATTTCTAATGGACCTGTATTAACTTTGGGTGGTTCATCTGTGAGCAGTATACAGGAGGCTTCAAATG CGGCAACACAGCAATTTAGTGGTACTGATTTGCTTAATGGACCTCTAGCTTCAAGTTTGAATTCAGATGTGCCTCAGCAACGCCCAAGTG TAGTTGTCTCACCACATTCTACAACCTCTGTTATACAGGGACATCAAATCATAGCAGTTCCCGACTCAGGATCAAAAGTATCCCATTCTC CTGCCCTATCATCTGACGTTCGGTCTACAAATGGCACAGCAGAATGCAAAACTGTAAAGAGGCCAGCAGAGGATACTGATAGGGAAACAG TCGCAGGAATTCCAAATAAAGTAGGAGTTAGAATTGTTACAATCAGTGACCCCAACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTGC CAGCAGGAGCAGATCCAAGCACTGTAGCTAAAGTAGCAATAGAAAGTGCTGTTCAGCAAAAGCAACAGCATCCACCAACATATGTACAGA ATGTGGTCCCGCAGAACACTCCTATGCCACCTTCACCAGCTGTACAAGTGCAGGGCCAGCCTAACAGTTCTCAGCCTTCTCCATTCAGTG GATCCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGACAGAACTTCATGTGTCTGTGGCAGTCTTGTAAAAAGTGGTTTCAGACACCCT CACAGGTTTTCTACCATGCAGCAACTGAACATGGAGGAAAAGATGTATATCCAGGGCAGTGTCTTTGGGAAGGTTGTGAGCCTTTTCAGC GACAGCGGTTTTCTTTTATTACCCACTTGCAGGATAAGCACTGTTCAAAGGATGCCCTACTTGCAGGATTAAAACAAGATGAACCAGGAC AAGCAGGAAGTCAGAAGTCTTCTACCAAGCAGCCAACTGTAGGGGGCACAAGCTCAACTCCTAGAGCACAAAAGGCCATTGTGAATCATC CCAGTGCTGCACTTATGGCTCTGAGGAGAGGATCAAGAAACCTTGTCTTTCGAGATTTTACAGTGAGTAATATGTTTTCTGTAGCCAAAG TGAATTTAGTTTATTTTATTTTTACATATAAGTTAATAAAATTAGATAACTGTATTTTCTTCATTGTTTTTCTCATCAATTTTGCAAATA CATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAAGTTAAAACAACCAAAAATATTGATCCC AGGAATGGAATCCCAAAGTTAACTCCAGGCGACAATCCATATATGTACCCAGAACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCTC CCACCAGTGAATTTTTCAATAGTGCCTTATGAAAAGAAATTTGATACATTTATTCCACTTGAGCCTCTTCCACAAATTCCCAACTTGCCT TTCTGGGTGAAGGAGAAGGCCAACAGTTTGAAAAATGAGATACAAGAGGTTGAGGAGCTTGACAACTGGCAGCCAGCAGTGCCCTTAATG CACATGCTACACCTTTCTGGTGCTTTGGACTTTCCAAGACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGC >6442_6442_1_ARID2-SPATS1_ARID2_chr12_46287504_ENST00000422737_SPATS1_chr6_44336116_ENST00000288390_length(amino acids)=1766AA_BP= MDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKPQLPIGAIPSSYNYQ QHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEE WKEKTDRDFVKFWKDIVDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEEGNVKLLAANRTCLR FLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREII CHLTLPDVLLVISTLEVLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSEIRPQAIEQVQTQTH VASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVE DSSSNGQAHIHVVGVKRRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSSNLTATQMSFPVQGV HTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQNSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLH HPSVIPQQSPLHTVVPGQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGSQSQDTVIIAPPQYV TTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKPLPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIH QIVLANPAALPAGQTVQLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQ QVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQ QNVQLVPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAGITMSGTQTGVGLPV QTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSL PPSNSGKIQSETNQCSLISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPME PQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQQFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQII AVPDSGSKVSHSPALSSDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAV QQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQPGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYP GQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAALMALRRGSRNLVFR -------------------------------------------------------------- >6442_6442_2_ARID2-SPATS1_ARID2_chr12_46287504_ENST00000422737_SPATS1_chr6_44336116_ENST00000323108_length(transcript)=5821nt_BP=5389nt ACCACAGCAGAGGGTCGCCTTTTAAAAAAATCCCTGCGGTGGGTGGGAAGGAGCTGGATCTTCACGGTCTCTACACCAGAGTCACTACTT TAGGCGGATTCGCGAAGGTTTCTGAGAAGAATCAGTGGGGAGAAATTGTTGAAGAGTTCAACTTTCCCAGAAGTTGTTCTAACGCTGCCT TTGCTTTAAAACAGTATTACTTGCGTTACCTAGAAAAGTACGAGAAAGTTCATCATTTTGGGGAGGATGATGATGAGGTACCACCAGGCA ATCCAAAGCCACAGCTTCCTATTGGTGCAATTCCATCTTCCTACAATTACCAGCAACACAGTGTGTCGGATTATCTGCGTCAAAGTTATG GGCTGTCCATGGACTTTAATTCGCCAAATGATTATAATAAATTGGTGCTTTCACTGTTATCTGGACTCCCAAATGAAGTGGACTTTGCTA TTAACGTATGCACTCTCCTATCAAATGAAAGCAAGCACGTCATGCAACTTGAAAAAGATCCTAAAATCATCACTTTACTACTTGCTAATG CCGGGGTGTTTGACGACACTTTAGGATCCTTTTCCACTGTATTTGGAGAAGAATGGAAAGAGAAGACTGATAGAGACTTCGTTAAGTTTT GGAAAGACATCGTTGATGATAATGAAGTTCGTGACCTCATTTCTGACAGAAACAAGTCTCATGAAGGTACATCAGGAGAATGGATTTGGG AGTCTTTATTTCATCCACCTCGAAAGCTGGGCATTAACGATATTGAAGGACAGCGGGTACTTCAGATTGCAGTGATTTTGAGAAATCTTT CCTTTGAGGAGGGCAATGTTAAGCTCTTGGCAGCTAATCGTACCTGTCTTCGTTTCCTATTACTTTCTGCACATAGTCATTTTATTTCTT TAAGGCAATTAGGCCTTGACACATTAGGAAATATTGCAGCTGAGCTTTTACTGGACCCTGTTGATTTCAAAACTACTCATCTGATGTTTC ATACTGTTACAAAATGTCTAATGTCAAGGGATAGATTTTTAAAGATGAGAGGCATGGAAATTTTGGGAAATCTTTGCAAAGCAGAAGATA ATGGTGTTTTAATTTGTGAATATGTGGATCAGGATTCCTACAGAGAGATCATTTGTCATCTCACTTTACCTGATGTGCTGCTTGTAATCT CAACACTCGAGGTGCTATACATGCTCACGGAAATGGGAGATGTTGCTTGCACAAAAATTGCAAAAGTAGAAAAGAGCATAGACATGTTAG TGTGTCTGGTTTCTATGGATATTCAGATGTTTGGCCCTGATGCACTAGCTGCGGTAAAACTCATTGAACACCCAAGTTCCAGTCATCAAA TGTTATCTGAAATTAGGCCACAAGCTATAGAGCAAGTCCAAACCCAGACTCATGTAGCATCTGCCCCAGCTTCCAGAGCAGTTGTAGCGC AGCATGTTGCTCCACCTCCAGGAATAGTGGAAATAGATAGTGAGAAGTTTGCTTGTCAGTGGCTAAATGCTCATTTTGAAGTAAATCCAG ATTGTTCTGTTTCTCGAGCAGAAATGTATTCTGAATACCTCTCGACTTGCAGTAAATTAGCTCGTGGTGGAATCCTAACATCAACTGGAT TTTATAAATGTCTTAGAACGGTCTTTCCAAATCATACAGTGAAGAGAGTGGAGGATTCCAGTAGCAATGGGCAGGCACATATTCATGTGG TAGGAGTAAAACGGAGGGCTATACCACTTCCCATTCAGATGTACTATCAGCAGCAACCAGTTTCTACTTCTGTTGTTCGTGTTGATTCTG TTCCTGATGTATCTCCTGCTCCTTCACCTGCAGGAATCCCTCATGGATCACAAACCATAGGAAACCATTTTCAGAGGACTCCTGTTGCCA ACCAATCTTCAAATCTGACTGCAACACAAATGTCTTTTCCTGTACAAGGTGTTCATACTGTGGCACAAACTGTTTCAAGAATTCCACAAA ATCCTTCACCTCATACCCACCAGCAACAAAATGCTCCAGTGACTGTCATTCAAAGTAAAGCTCCAATTCCTTGTGAAGTTGTTAAGGCTA CAGTTATCCAGAATTCCATACCCCAGACAGGAGTTCCTGTTAGTATTGCTGTTGGAGGAGGACCTCCACAGAGTTCTGTTGTTCAGAATC ATAGTACAGGGCCACAACCTGTTACAGTTGTGAATTCTCAGACATTGCTTCACCATCCATCTGTAATTCCACAGCAGTCTCCATTACACA CAGTGGTACCAGGACAGATCCCTTCAGGCACTCCTGTTACAGTAATTCAACAAGCTGTCCCACAGAGTCATATGTTTGGCAGAGTACAGA ACATACCAGCATGTACTTCTACAGTTTCACAGGGTCAACAGTTAATCACCACATCACCCCAACCTGTGCAAACTTCATCTCAACAGACAT CAGCTGGTAGCCAGTCACAAGATACTGTTATCATAGCACCCCCACAGTATGTAACAACTTCTGCATCCAATATTGTCTCAGCAACTTCAG TACAGAATTTTCAGGTAGCTACAGGACAAATGGTTACTATTGCTGGTGTCCCAAGTCCACAAGCCTCAAGGGTAGGGTTTCAGAACATTG CACCAAAACCTCTCCCTTCTCAGCAAGTTTCATCTACAGTGGTACAGCAGCCTATTCAACAACCACAGCAGCCAACCCAACAAAGCGTAG TGATTGTAAGCCAGCCAGCTCAACAAGGTCAAACTTATGCACCAGCCATTCACCAAATTGTTCTTGCTAATCCAGCAGCTCTTCCAGCTG GTCAGACAGTTCAGCTAACTGGACAACCTAACATAACTCCATCTTCTTCACCATCACCTGTCCCAGCTACTAATAACCAAGTCCCTACTG CCATGTCGTCGTCCTCTACCCCTCAATCACAGGGACCACCTCCTACTGTCAGTCAAATGTTATCTGTGAAAAGGCAGCAACAGCAGCAAC ATTCACCAGCACCCCCACCACAGCAGGTACAAGTACAAGTTCAGCAGCCCCAACAAGTACAGATGCAAGTTCAACCTCAACAGTCGAATG CAGGAGTTGGTCAGCCTGCCTCTGGTGAGTCGAGTCTGATTAAACAGCTTCTGCTTCCGAAACGTGGTCCTTCAACACCAGGTGGTAAGC TTATTCTCCCAGCTCCACAGATTCCTCCCCCTAATAATGCAAGAGCTCCTAGCCCTCAGGTGGTCTATCAGGTGGCCAGTAACCAAGCCG CAGGTTTTGGAGTGCAGGGGCAAACTCCAGCTCAGCAGCTATTGGTTGGGCAGCAAAATGTTCAGTTGGTCCCAAGTGCAATGCCACCCT CAGGGGGAGTACAAACTGTGCCCATTTCGAACTTACAAATATTGCCAGGTCCACTGATCTCAAATAGCCCAGCAACCATTTTCCAAGGGA CTTCTGGCAACCAGGTAACCATAACAGTTGTGCCAAATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGAAATGCAACTCAGCTCATTG CTCCAGCAGGAATTACCATGAGCGGAACGCAGACAGGAGTTGGACTTCCAGTACAAACGCTTCCAGCCACTCAAGCATCTCCTGCTGGAC AATCATCATGTACTACTGCTACTCCCCCATTCAAAGGTGATAAAATAATTTGCCAAAAGGAGGAGGAAGCAAAGGAAGCAACAGGTTTAC ATGTTCATGAACGTAAAATTGAAGTCATGGAGAACCCGTCCTGCCGACGAGGAGCCACAAACACCAGCAATGGGGATACAAAGGAAAATG AAATGCATGTGGGAAGTCTTTTAAATGGGAGAAAGTACAGTGACTCAAGTCTACCTCCTTCAAACTCAGGGAAAATTCAAAGTGAGACTA ATCAGTGCTCACTAATCAGTAATGGGCCATCATTGGAATTAGGTGAGAATGGAGCATCTGGGAAACAGAACTCAGAACAAATAGACATGC AAGATATCAAAAGTGATTTGAGAAAACCGCTAGTTAATGGAATCTGTGATTTTGATAAAGGAGATGGTTCTCATTTAAGCAAAAACATTC CAAATCATAAAACTTCCAATCATGTAGGAAATGGTGAGATATCTCCAATGGAACCACAAGGGACTTTAGATATCACTCAGCAAGATACTG CCAAAGGTGATCAACTAGAAAGAATTTCTAATGGACCTGTATTAACTTTGGGTGGTTCATCTGTGAGCAGTATACAGGAGGCTTCAAATG CGGCAACACAGCAATTTAGTGGTACTGATTTGCTTAATGGACCTCTAGCTTCAAGTTTGAATTCAGATGTGCCTCAGCAACGCCCAAGTG TAGTTGTCTCACCACATTCTACAACCTCTGTTATACAGGGACATCAAATCATAGCAGTTCCCGACTCAGGATCAAAAGTATCCCATTCTC CTGCCCTATCATCTGACGTTCGGTCTACAAATGGCACAGCAGAATGCAAAACTGTAAAGAGGCCAGCAGAGGATACTGATAGGGAAACAG TCGCAGGAATTCCAAATAAAGTAGGAGTTAGAATTGTTACAATCAGTGACCCCAACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTGC CAGCAGGAGCAGATCCAAGCACTGTAGCTAAAGTAGCAATAGAAAGTGCTGTTCAGCAAAAGCAACAGCATCCACCAACATATGTACAGA ATGTGGTCCCGCAGAACACTCCTATGCCACCTTCACCAGCTGTACAAGTGCAGGGCCAGCCTAACAGTTCTCAGCCTTCTCCATTCAGTG GATCCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGACAGAACTTCATGTGTCTGTGGCAGTCTTGTAAAAAGTGGTTTCAGACACCCT CACAGGTTTTCTACCATGCAGCAACTGAACATGGAGGAAAAGATGTATATCCAGGGCAGTGTCTTTGGGAAGGTTGTGAGCCTTTTCAGC GACAGCGGTTTTCTTTTATTACCCACTTGCAGGATAAGCACTGTTCAAAGGATGCCCTACTTGCAGGATTAAAACAAGATGAACCAGGAC AAGCAGGAAGTCAGAAGTCTTCTACCAAGCAGCCAACTGTAGGGGGCACAAGCTCAACTCCTAGAGCACAAAAGGCCATTGTGAATCATC CCAGTGCTGCACTTATGGCTCTGAGGAGAGGATCAAGAAACCTTGTCTTTCGAGATTTTACAGTGAGTAATATGTTTTCTGTAGCCAAAG TGAATTTAGTTTATTTTATTTTTACATATAAGTTAATAAAATTAGATAACTGTATTTTCTTCATTGTTTTTCTCATCAATTTTGCAAATA CATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAAGTTAAAACAACCAAAAATATTGATCCC AGGAATGGAATCCCAAAGTTAACTCCAGGCGACAATCCATATATGTACCCAGAACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCTC CCACCAGTGAATTTTTCAATAGTGCCTTATGAAAAGAAATTTGATACATTTATTCCACTTGAGCCTCTTCCACAAATTCCCAACTTGCCT TTCTGGGTGAAGGAGAAGGCCAACAGTTTGAAAAATGAGATACAAGAGGTTGAGGAGCTTGACAACTGGCAGCCAGCAGTGCCCTTAATG CACATGCTACACCTTTCTGGTGCTTTGGACTTTCCAAGACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGC >6442_6442_2_ARID2-SPATS1_ARID2_chr12_46287504_ENST00000422737_SPATS1_chr6_44336116_ENST00000323108_length(amino acids)=1766AA_BP= MDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKPQLPIGAIPSSYNYQ QHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEE WKEKTDRDFVKFWKDIVDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEEGNVKLLAANRTCLR FLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREII CHLTLPDVLLVISTLEVLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSEIRPQAIEQVQTQTH VASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVE DSSSNGQAHIHVVGVKRRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSSNLTATQMSFPVQGV HTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQNSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLH HPSVIPQQSPLHTVVPGQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGSQSQDTVIIAPPQYV TTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKPLPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIH QIVLANPAALPAGQTVQLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQ QVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQ QNVQLVPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAGITMSGTQTGVGLPV QTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSL PPSNSGKIQSETNQCSLISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPME PQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQQFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQII AVPDSGSKVSHSPALSSDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAV QQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQPGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYP GQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAALMALRRGSRNLVFR -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ARID2-SPATS1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ARID2-SPATS1 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ARID2-SPATS1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ARID2 | C2239176 | Liver carcinoma | 2 | CGI;CTD_human |
Hgene | ARID2 | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
Hgene | ARID2 | C0265338 | Coffin-Siris syndrome | 1 | ORPHANET |
Hgene | ARID2 | C0376358 | Malignant neoplasm of prostate | 1 | CTD_human |