![]() |
||||||
|
![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:SF3B1-ACTN1 (FusionGDB2 ID:HG23451TG87) |
Fusion Gene Summary for SF3B1-ACTN1 |
![]() |
Fusion gene information | Fusion gene name: SF3B1-ACTN1 | Fusion gene ID: hg23451tg87 | Hgene | Tgene | Gene symbol | SF3B1 | ACTN1 | Gene ID | 23451 | 87 |
Gene name | splicing factor 3b subunit 1 | actinin alpha 1 | |
Synonyms | Hsh155|MDS|PRP10|PRPF10|SAP155|SF3b155 | BDPLT15 | |
Cytomap | ('SF3B1')('ACTN1') 2q33.1 | 14q24.1|14q22-q24 | |
Type of gene | protein-coding | protein-coding | |
Description | splicing factor 3B subunit 1pre-mRNA processing 10pre-mRNA splicing factor SF3b, 155 kDa subunitspliceosome-associated protein 155splicing factor 3b, subunit 1, 155kDa | alpha-actinin-1F-actin cross-linking proteinactinin 1 smooth musclealpha-actinin cytoskeletal isoformepididymis secretory sperm binding proteinnon-muscle alpha-actinin-1 | |
Modification date | 20200329 | 20200327 | |
UniProtAcc | . | P12814 | |
Ensembl transtripts involved in fusion gene | ENST00000409915, ENST00000335508, ENST00000414963, ENST00000462613, ENST00000487698, | ||
Fusion gene scores | * DoF score | 8 X 12 X 3=288 | 17 X 18 X 5=1530 |
# samples | 13 | 20 | |
** MAII score | log2(13/288*10)=-1.14755718841386 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(20/1530*10)=-2.93545974780529 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: SF3B1 [Title/Abstract] AND ACTN1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | SF3B1(198283233)-ACTN1(69347629), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | SF3B1-ACTN1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. SF3B1-ACTN1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. SF3B1-ACTN1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. SF3B1-ACTN1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
![]() |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | SF3B1 | GO:0000398 | mRNA splicing, via spliceosome | 11252167|28781166|29360106 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
![]() |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
![]() |
![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-D7-6822-01A | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
Top |
Fusion Gene ORF analysis for SF3B1-ACTN1 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000409915 | ENST00000193403 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
3UTR-3CDS | ENST00000409915 | ENST00000376839 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
3UTR-3CDS | ENST00000409915 | ENST00000394419 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
3UTR-3CDS | ENST00000409915 | ENST00000438964 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
3UTR-3CDS | ENST00000409915 | ENST00000538545 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
3UTR-intron | ENST00000409915 | ENST00000554508 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
5CDS-intron | ENST00000335508 | ENST00000554508 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
In-frame | ENST00000335508 | ENST00000193403 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
In-frame | ENST00000335508 | ENST00000376839 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
In-frame | ENST00000335508 | ENST00000394419 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
In-frame | ENST00000335508 | ENST00000438964 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
In-frame | ENST00000335508 | ENST00000538545 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000414963 | ENST00000193403 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000414963 | ENST00000376839 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000414963 | ENST00000394419 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000414963 | ENST00000438964 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000414963 | ENST00000538545 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000462613 | ENST00000193403 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000462613 | ENST00000376839 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000462613 | ENST00000394419 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000462613 | ENST00000438964 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000462613 | ENST00000538545 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000487698 | ENST00000193403 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000487698 | ENST00000376839 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000487698 | ENST00000394419 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000487698 | ENST00000438964 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-3CDS | ENST00000487698 | ENST00000538545 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-intron | ENST00000414963 | ENST00000554508 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-intron | ENST00000462613 | ENST00000554508 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
intron-intron | ENST00000487698 | ENST00000554508 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - |
![]() |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000335508 | SF3B1 | chr2 | 198283233 | - | ENST00000193403 | ACTN1 | chr14 | 69347629 | - | 1952 | 587 | 71 | 745 | 224 |
ENST00000335508 | SF3B1 | chr2 | 198283233 | - | ENST00000394419 | ACTN1 | chr14 | 69347629 | - | 1838 | 587 | 71 | 745 | 224 |
ENST00000335508 | SF3B1 | chr2 | 198283233 | - | ENST00000438964 | ACTN1 | chr14 | 69347629 | - | 1394 | 587 | 71 | 745 | 224 |
ENST00000335508 | SF3B1 | chr2 | 198283233 | - | ENST00000376839 | ACTN1 | chr14 | 69347629 | - | 1297 | 587 | 71 | 745 | 224 |
ENST00000335508 | SF3B1 | chr2 | 198283233 | - | ENST00000538545 | ACTN1 | chr14 | 69347629 | - | 1350 | 587 | 71 | 874 | 267 |
![]() |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000335508 | ENST00000193403 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - | 0.000460851 | 0.99953914 |
ENST00000335508 | ENST00000394419 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - | 0.000257405 | 0.99974257 |
ENST00000335508 | ENST00000438964 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - | 0.000271514 | 0.9997285 |
ENST00000335508 | ENST00000376839 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - | 0.000202413 | 0.99979764 |
ENST00000335508 | ENST00000538545 | SF3B1 | chr2 | 198283233 | - | ACTN1 | chr14 | 69347629 | - | 0.000451983 | 0.999548 |
Top |
Fusion Genomic Features for SF3B1-ACTN1 |
![]() |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
![]() |
![]() |
Top |
Fusion Protein Features for SF3B1-ACTN1 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr2:198283233/chr14:69347629) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
![]() |
![]() |
Hgene | Tgene |
. | ACTN1 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures. This is a bundling protein. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 1010_1048 | 183 | 88.0 | Repeat | Note=HEAT 8 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 1052_1090 | 183 | 88.0 | Repeat | Note=HEAT 9 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 1122_1160 | 183 | 88.0 | Repeat | Note=HEAT 10 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 1163_1201 | 183 | 88.0 | Repeat | Note=HEAT 11 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 569_603 | 183 | 88.0 | Repeat | Note=HEAT 2 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 604_641 | 183 | 88.0 | Repeat | Note=HEAT 3 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 643_677 | 183 | 88.0 | Repeat | Note=HEAT 4 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 680_718 | 183 | 88.0 | Repeat | Note=HEAT 5 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 763_801 | 183 | 88.0 | Repeat | Note=HEAT 6 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 843_881 | 183 | 88.0 | Repeat | Note=HEAT 7 |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 759_770 | 0 | 893.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 800_811 | 0 | 893.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 759_770 | 0 | 915.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 800_811 | 0 | 915.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 759_770 | 0 | 888.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 800_811 | 0 | 888.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 759_770 | 0 | 931.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 800_811 | 0 | 931.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 144_250 | 0 | 893.0 | Domain | Calponin-homology (CH) 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 31_135 | 0 | 893.0 | Domain | Calponin-homology (CH) 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 746_781 | 0 | 893.0 | Domain | EF-hand 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 787_822 | 0 | 893.0 | Domain | EF-hand 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 144_250 | 0 | 915.0 | Domain | Calponin-homology (CH) 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 31_135 | 0 | 915.0 | Domain | Calponin-homology (CH) 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 746_781 | 0 | 915.0 | Domain | EF-hand 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 787_822 | 0 | 915.0 | Domain | EF-hand 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 144_250 | 0 | 888.0 | Domain | Calponin-homology (CH) 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 31_135 | 0 | 888.0 | Domain | Calponin-homology (CH) 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 746_781 | 0 | 888.0 | Domain | EF-hand 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 787_822 | 0 | 888.0 | Domain | EF-hand 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 144_250 | 0 | 931.0 | Domain | Calponin-homology (CH) 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 31_135 | 0 | 931.0 | Domain | Calponin-homology (CH) 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 746_781 | 0 | 931.0 | Domain | EF-hand 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 787_822 | 0 | 931.0 | Domain | EF-hand 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 1_247 | 0 | 893.0 | Region | Note=Actin-binding | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 1_247 | 0 | 915.0 | Region | Note=Actin-binding | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 1_247 | 0 | 888.0 | Region | Note=Actin-binding | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 1_247 | 0 | 931.0 | Region | Note=Actin-binding | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 274_384 | 0 | 893.0 | Repeat | Note=Spectrin 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 394_499 | 0 | 893.0 | Repeat | Note=Spectrin 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 509_620 | 0 | 893.0 | Repeat | Note=Spectrin 3 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 630_733 | 0 | 893.0 | Repeat | Note=Spectrin 4 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 274_384 | 0 | 915.0 | Repeat | Note=Spectrin 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 394_499 | 0 | 915.0 | Repeat | Note=Spectrin 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 509_620 | 0 | 915.0 | Repeat | Note=Spectrin 3 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 630_733 | 0 | 915.0 | Repeat | Note=Spectrin 4 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 274_384 | 0 | 888.0 | Repeat | Note=Spectrin 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 394_499 | 0 | 888.0 | Repeat | Note=Spectrin 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 509_620 | 0 | 888.0 | Repeat | Note=Spectrin 3 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 630_733 | 0 | 888.0 | Repeat | Note=Spectrin 4 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 274_384 | 0 | 931.0 | Repeat | Note=Spectrin 1 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 394_499 | 0 | 931.0 | Repeat | Note=Spectrin 2 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 509_620 | 0 | 931.0 | Repeat | Note=Spectrin 3 | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 630_733 | 0 | 931.0 | Repeat | Note=Spectrin 4 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 1010_1048 | 165 | 1305.0 | Repeat | Note=HEAT 8 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 1052_1090 | 165 | 1305.0 | Repeat | Note=HEAT 9 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 1122_1160 | 165 | 1305.0 | Repeat | Note=HEAT 10 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 1163_1201 | 165 | 1305.0 | Repeat | Note=HEAT 11 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 569_603 | 165 | 1305.0 | Repeat | Note=HEAT 2 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 604_641 | 165 | 1305.0 | Repeat | Note=HEAT 3 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 643_677 | 165 | 1305.0 | Repeat | Note=HEAT 4 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 680_718 | 165 | 1305.0 | Repeat | Note=HEAT 5 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 763_801 | 165 | 1305.0 | Repeat | Note=HEAT 6 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 843_881 | 165 | 1305.0 | Repeat | Note=HEAT 7 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 1010_1048 | 0 | 145.0 | Repeat | Note=HEAT 8 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 1052_1090 | 0 | 145.0 | Repeat | Note=HEAT 9 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 1122_1160 | 0 | 145.0 | Repeat | Note=HEAT 10 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 1163_1201 | 0 | 145.0 | Repeat | Note=HEAT 11 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 569_603 | 0 | 145.0 | Repeat | Note=HEAT 2 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 604_641 | 0 | 145.0 | Repeat | Note=HEAT 3 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 643_677 | 0 | 145.0 | Repeat | Note=HEAT 4 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 680_718 | 0 | 145.0 | Repeat | Note=HEAT 5 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 763_801 | 0 | 145.0 | Repeat | Note=HEAT 6 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 843_881 | 0 | 145.0 | Repeat | Note=HEAT 7 |
Top |
Fusion Gene Sequence for SF3B1-ACTN1 |
![]() |
>81044_81044_1_SF3B1-ACTN1_SF3B1_chr2_198283233_ENST00000335508_ACTN1_chr14_69347629_ENST00000193403_length(transcript)=1952nt_BP=587nt AGTGCAGCCCCCAGCTATTTTTCTCCGTGGCGGCGGCGACGAGCGGAAGTTCTTGGGAGCGCCAGTTCCGTCTGTGTGTTCGAGTGGACA AAATGGCGAAGATCGCCAAGACTCACGAAGATATTGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAG GAGTGGGCCTCGATTCTACAGGTTATTATGACCAGGAAATTTATGGTGGAAGTGACAGCAGATTTGCTGGATACGTGACATCAATTGCTG CAACTGAACTTGAAGATGATGACGATGACTATTCATCATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCTGTGGCAT TGCTTAATGATATACCACAGTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGGAAGATGAATACA AAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGAGGGAAAACCCCTGATCCTAAAATGAATGCTA GGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAAAACTACATTACCATGGACGAGCTGCGCCGCGAGCTGCCACCCG ACCAGGCTGAGTACTGCATCGCGCGGATGGCCCCCTACACCGGCCCCGACTCCGTGCCAGGTGCTCTGGACTACATGTCCTTCTCCACGG CGCTGTACGGCGAGAGTGACCTCTAATCCACCCCGCCCGGCCGCCCTCGTCTTGTGCGCCGTGCCCTGCCTTGCACCTCCGCCGTCGCCC ATCTCCTGCCTGGGTTCGGTTTCAGCTCCCAGCCTCCACCCGGGTGAGCTGGGGCCCACGTGGCATCGATCCTCCCTGCCCGCGAAGTGA CAGTTTACAAAATTATTTTCTGCAAAAAAGAAAAAAAAGTTACGTTAAAAACCAAAAAACTACATATTTTATTATAGAAAAAGTATTTTT TCTCCACCAGACAAATGGAAAAAAAGAGGAAAGATTAACTATTTGCACCGAAATGTCTTGTTTTGTTGCGACATAGGAAAATAACCAAGC ACAAAGTTATATTCCATCCTTTTTACTGATTTTTTTTTCTTCTATCTGTTCCATCTGCTGTATTCATTTCTCCAATCTCATGTCCATTTT GGTGTGGGAGTCGGGGTAGGGGGTACTCTTGTCAAAAGGCACATTGGTGCATGTGTGTTTGCTAGCTCACTTGTCCATGAAAATATTTTA TGATATTAAAGAAAATCTTTTGAAATGGCTGTTTTTTAAGGAAGAGAATTTATGTGGCTTCTCATTTTTAAATCCCCTCAGAGGTGTGAC TAGTCTCTTTATCAGCACACACTTAAAAAATTTTTAATATTGTCTATTAAAAATAGGACAAACTTGGAGAGTATGGACAACTTTGATATT GCTTGGCACAGATGGTATTAAAGGAGAAGCAGAATTTGCCCGCATCATGAGCATTGTGGACCCCAACCGCCTGGGGGTAGTGACATTCCA GGCCTTCATTGACTTCATGTCCCGCGAGACAGCCGACACAGATACAGCAGACCAAGTCATGGCTTCCTTCAAGATCCTGGCTGGGGACAA GGATCACTCCGGCACACTGGGTCCCGAGGAGTTCAAAGCCTGCCTCATCAGCTTGGGTTATGATATTGGCAACGACCCCCAGCACATCCG TGTGGGCTGGGAGCAGCTGCTCACCACCATCGCCAGGACCATCAATGAGGTAGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAG CCAGGAGCAGATGAATGAGTTCCGGGCCTCCTTCAACCACTTTGACCGGCATCGTCAACTACAAGCCAAAGATTGATCAGCTGGAGGGCG >81044_81044_1_SF3B1-ACTN1_SF3B1_chr2_198283233_ENST00000335508_ACTN1_chr14_69347629_ENST00000193403_length(amino acids)=224AA_BP= MCVRVDKMAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDYSSSTSLLGQKKPG YHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEENYITMDEL -------------------------------------------------------------- >81044_81044_2_SF3B1-ACTN1_SF3B1_chr2_198283233_ENST00000335508_ACTN1_chr14_69347629_ENST00000376839_length(transcript)=1297nt_BP=587nt AGTGCAGCCCCCAGCTATTTTTCTCCGTGGCGGCGGCGACGAGCGGAAGTTCTTGGGAGCGCCAGTTCCGTCTGTGTGTTCGAGTGGACA AAATGGCGAAGATCGCCAAGACTCACGAAGATATTGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAG GAGTGGGCCTCGATTCTACAGGTTATTATGACCAGGAAATTTATGGTGGAAGTGACAGCAGATTTGCTGGATACGTGACATCAATTGCTG CAACTGAACTTGAAGATGATGACGATGACTATTCATCATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCTGTGGCAT TGCTTAATGATATACCACAGTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGGAAGATGAATACA AAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGAGGGAAAACCCCTGATCCTAAAATGAATGCTA GGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAAAACTACATTACCATGGACGAGCTGCGCCGCGAGCTGCCACCCG ACCAGGCTGAGTACTGCATCGCGCGGATGGCCCCCTACACCGGCCCCGACTCCGTGCCAGGTGCTCTGGACTACATGTCCTTCTCCACGG CGCTGTACGGCGAGAGTGACCTCTAATCCACCCCGCCCGGCCGCCCTCGTCTTGTGCGCCGTGCCCTGCCTTGCACCTCCGCCGTCGCCC ATCTCCTGCCTGGGAGAAGCAGAATTTGCCCGCATCATGAGCATTGTGGACCCCAACCGCCTGGGGGTAGTGACATTCCAGGCCTTCATT GACTTCATGTCCCGCGAGACAGCCGACACAGATACAGCAGACCAAGTCATGGCTTCCTTCAAGATCCTGGCTGGGGACAAGAAGAAGACA GGCATGATGGACACGGATGATTTCCGCGCCTGCCTGATCTCCATGGGTTACAACATGCACATCCGTGTGGGCTGGGAGCAGCTGCTCACC ACCATCGCCAGGACCATCAATGAGGTAGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAGCCAGGAGCAGATGAATGAGTTCCGG GCCTCCTTCAACCACTTTGACCGGCATCGTCAACTACAAGCCAAAGATTGATCAGCTGGAGGGCGACCACCAGCTCATCCAGGAGGCGCT >81044_81044_2_SF3B1-ACTN1_SF3B1_chr2_198283233_ENST00000335508_ACTN1_chr14_69347629_ENST00000376839_length(amino acids)=224AA_BP= MCVRVDKMAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDYSSSTSLLGQKKPG YHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEENYITMDEL -------------------------------------------------------------- >81044_81044_3_SF3B1-ACTN1_SF3B1_chr2_198283233_ENST00000335508_ACTN1_chr14_69347629_ENST00000394419_length(transcript)=1838nt_BP=587nt AGTGCAGCCCCCAGCTATTTTTCTCCGTGGCGGCGGCGACGAGCGGAAGTTCTTGGGAGCGCCAGTTCCGTCTGTGTGTTCGAGTGGACA AAATGGCGAAGATCGCCAAGACTCACGAAGATATTGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAG GAGTGGGCCTCGATTCTACAGGTTATTATGACCAGGAAATTTATGGTGGAAGTGACAGCAGATTTGCTGGATACGTGACATCAATTGCTG CAACTGAACTTGAAGATGATGACGATGACTATTCATCATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCTGTGGCAT TGCTTAATGATATACCACAGTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGGAAGATGAATACA AAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGAGGGAAAACCCCTGATCCTAAAATGAATGCTA GGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAAAACTACATTACCATGGACGAGCTGCGCCGCGAGCTGCCACCCG ACCAGGCTGAGTACTGCATCGCGCGGATGGCCCCCTACACCGGCCCCGACTCCGTGCCAGGTGCTCTGGACTACATGTCCTTCTCCACGG CGCTGTACGGCGAGAGTGACCTCTAATCCACCCCGCCCGGCCGCCCTCGTCTTGTGCGCCGTGCCCTGCCTTGCACCTCCGCCGTCGCCC ATCTCCTGCCTGGGTTCGGTTTCAGCTCCCAGCCTCCACCCGGGTGAGCTGGGGCCCACGTGGCATCGATCCTCCCTGCCCGCGAAGTGA CAGTTTACAAAATTATTTTCTGCAAAAAAGAAAAAAAAGTTACGTTAAAAACCAAAAAACTACATATTTTATTATAGAAAAAGTATTTTT TCTCCACCAGACAAATGGAAAAAAAGAGGAAAGATTAACTATTTGCACCGAAATGTCTTGTTTTGTTGCGACATAGGAAAATAACCAAGC ACAAAGTTATATTCCATCCTTTTTACTGATTTTTTTTTCTTCTATCTGTTCCATCTGCTGTATTCATTTCTCCAATCTCATGTCCATTTT GGTGTGGGAGTCGGGGTAGGGGGTACTCTTGTCAAAAGGCACATTGGTGCATGTGTGTTTGCTAGCTCACTTGTCCATGAAAATATTTTA TGATATTAAAGAAAATCTTTTGGGAGAAGCAGAATTTGCCCGCATCATGAGCATTGTGGACCCCAACCGCCTGGGGGTAGTGACATTCCA GGCCTTCATTGACTTCATGTCCCGCGAGACAGCCGACACAGATACAGCAGACCAAGTCATGGCTTCCTTCAAGATCCTGGCTGGGGACAA GAAGAAGACAGGCATGATGGACACGGATGATTTCCGCGCCTGCCTGATCTCCATGGGTTACAACATGGATCACTCCGGCACACTGGGTCC CGAGGAGTTCAAAGCCTGCCTCATCAGCTTGGGTTATGATATTGGCAACGACCCCCAGCACATCCGTGTGGGCTGGGAGCAGCTGCTCAC CACCATCGCCAGGACCATCAATGAGGTAGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAGCCAGGAGCAGATGAATGAGTTCCG GGCCTCCTTCAACCACTTTGACCGGCATCGTCAACTACAAGCCAAAGATTGATCAGCTGGAGGGCGACCACCAGCTCATCCAGGAGGCGC >81044_81044_3_SF3B1-ACTN1_SF3B1_chr2_198283233_ENST00000335508_ACTN1_chr14_69347629_ENST00000394419_length(amino acids)=224AA_BP= MCVRVDKMAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDYSSSTSLLGQKKPG YHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEENYITMDEL -------------------------------------------------------------- >81044_81044_4_SF3B1-ACTN1_SF3B1_chr2_198283233_ENST00000335508_ACTN1_chr14_69347629_ENST00000438964_length(transcript)=1394nt_BP=587nt AGTGCAGCCCCCAGCTATTTTTCTCCGTGGCGGCGGCGACGAGCGGAAGTTCTTGGGAGCGCCAGTTCCGTCTGTGTGTTCGAGTGGACA AAATGGCGAAGATCGCCAAGACTCACGAAGATATTGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAG GAGTGGGCCTCGATTCTACAGGTTATTATGACCAGGAAATTTATGGTGGAAGTGACAGCAGATTTGCTGGATACGTGACATCAATTGCTG CAACTGAACTTGAAGATGATGACGATGACTATTCATCATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCTGTGGCAT TGCTTAATGATATACCACAGTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGGAAGATGAATACA AAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGAGGGAAAACCCCTGATCCTAAAATGAATGCTA GGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAAAACTACATTACCATGGACGAGCTGCGCCGCGAGCTGCCACCCG ACCAGGCTGAGTACTGCATCGCGCGGATGGCCCCCTACACCGGCCCCGACTCCGTGCCAGGTGCTCTGGACTACATGTCCTTCTCCACGG CGCTGTACGGCGAGAGTGACCTCTAATCCACCCCGCCCGGCCGCCCTCGTCTTGTGCGCCGTGCCCTGCCTTGCACCTCCGCCGTCGCCC ATCTCCTGCCTGGGTTCGGTTTCAGCTCCCAGCCTCCACCCGGGTGAGCTGGGGCCCACGTGGCATCGATCCTCCCTGCCCGCGAAGTGA CAGTTTACAAAATTATTTTGGAGAAGCAGAATTTGCCCGCATCATGAGCATTGTGGACCCCAACCGCCTGGGGGTAGTGACATTCCAGGC CTTCATTGACTTCATGTCCCGCGAGACAGCCGACACAGATACAGCAGACCAAGTCATGGCTTCCTTCAAGATCCTGGCTGGGGACAAGAA GAAGACAGGCATGATGGACACGGATGATTTCCGCGCCTGCCTGATCTCCATGGGTTACAACATGCACATCCGTGTGGGCTGGGAGCAGCT GCTCACCACCATCGCCAGGACCATCAATGAGGTAGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAGCCAGGAGCAGATGAATGA GTTCCGGGCCTCCTTCAACCACTTTGACCGGCATCGTCAACTACAAGCCAAAGATTGATCAGCTGGAGGGCGACCACCAGCTCATCCAGG >81044_81044_4_SF3B1-ACTN1_SF3B1_chr2_198283233_ENST00000335508_ACTN1_chr14_69347629_ENST00000438964_length(amino acids)=224AA_BP= MCVRVDKMAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDYSSSTSLLGQKKPG YHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEENYITMDEL -------------------------------------------------------------- >81044_81044_5_SF3B1-ACTN1_SF3B1_chr2_198283233_ENST00000335508_ACTN1_chr14_69347629_ENST00000538545_length(transcript)=1350nt_BP=587nt AGTGCAGCCCCCAGCTATTTTTCTCCGTGGCGGCGGCGACGAGCGGAAGTTCTTGGGAGCGCCAGTTCCGTCTGTGTGTTCGAGTGGACA AAATGGCGAAGATCGCCAAGACTCACGAAGATATTGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAG GAGTGGGCCTCGATTCTACAGGTTATTATGACCAGGAAATTTATGGTGGAAGTGACAGCAGATTTGCTGGATACGTGACATCAATTGCTG CAACTGAACTTGAAGATGATGACGATGACTATTCATCATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCTGTGGCAT TGCTTAATGATATACCACAGTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGGAAGATGAATACA AAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGAGGGAAAACCCCTGATCCTAAAATGAATGCTA GGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAATTACAGGAGGGAGGCAAAATGCAAACGGCACATGCTGCCTTCA CGCCGCCAGGCTTTGCGGCTGTGTCGGGCCGCGCCGCTTTACGGCTGCTGGACTTTGCGGCCTTCCTGACCACTCTCTCCTCGCAGAACT ACATTACCATGGACGAGCTGCGCCGCGAGCTGCCACCCGACCAGGCTGAGTACTGCATCGCGCGGATGGCCCCCTACACCGGCCCCGACT CCGTGCCAGGTGCTCTGGACTACATGTCCTTCTCCACGGCGCTGTACGGCGAGAGTGACCTCTAAGGAGAAGCAGAATTTGCCCGCATCA TGAGCATTGTGGACCCCAACCGCCTGGGGGTAGTGACATTCCAGGCCTTCATTGACTTCATGTCCCGCGAGACAGCCGACACAGATACAG CAGACCAAGTCATGGCTTCCTTCAAGATCCTGGCTGGGGACAAGAAGAAGACAGGCATGATGGACACGGATGATTTCCGCGCCTGCCTGA TCTCCATGGGTTACAACATGCACATCCGTGTGGGCTGGGAGCAGCTGCTCACCACCATCGCCAGGACCATCAATGAGGTAGAGAACCAGA TCCTGACCCGGGATGCCAAGGGCATCAGCCAGGAGCAGATGAATGAGTTCCGGGCCTCCTTCAACCACTTTGACCGGCATCGTCAACTAC AAGCCAAAGATTGATCAGCTGGAGGGCGACCACCAGCTCATCCAGGAGGCGCTCATCTTCGACAACAAGCACACCAACTACACCATGGAG >81044_81044_5_SF3B1-ACTN1_SF3B1_chr2_198283233_ENST00000335508_ACTN1_chr14_69347629_ENST00000538545_length(amino acids)=267AA_BP= MCVRVDKMAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDYSSSTSLLGQKKPG YHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEELQEGGKMQ -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for SF3B1-ACTN1 |
![]() |
![]() |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 1156_1157 | 183.66666666666666 | 88.0 | PHF5A |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 547_550 | 183.66666666666666 | 88.0 | PHF5A |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 223_491 | 183.66666666666666 | 88.0 | PPP1R8 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 529_568 | 183.66666666666666 | 88.0 | SF3B14 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000409915 | - | 6 | 7 | 1248_1304 | 183.66666666666666 | 88.0 | SF3B3 and SF3B5 |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000193403 | 0 | 21 | 274_733 | 0 | 893.0 | DDN | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000394419 | 0 | 22 | 274_733 | 0 | 915.0 | DDN | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000438964 | 0 | 21 | 274_733 | 0 | 888.0 | DDN | |
Tgene | ACTN1 | chr2:198283233 | chr14:69347629 | ENST00000538545 | 0 | 21 | 274_733 | 0 | 931.0 | DDN |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 1156_1157 | 165.0 | 1305.0 | PHF5A |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 547_550 | 165.0 | 1305.0 | PHF5A |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 1156_1157 | 0 | 145.0 | PHF5A |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 547_550 | 0 | 145.0 | PHF5A |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 223_491 | 165.0 | 1305.0 | PPP1R8 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 223_491 | 0 | 145.0 | PPP1R8 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 529_568 | 165.0 | 1305.0 | SF3B14 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 529_568 | 0 | 145.0 | SF3B14 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000335508 | - | 5 | 25 | 1248_1304 | 165.0 | 1305.0 | SF3B3 and SF3B5 |
Hgene | SF3B1 | chr2:198283233 | chr14:69347629 | ENST00000414963 | - | 1 | 5 | 1248_1304 | 0 | 145.0 | SF3B3 and SF3B5 |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for SF3B1-ACTN1 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | ACTN1 | P12814 | DB06773 | Human calcitonin | Incorporation into and destabilization | Biotech | Approved|Investigational |
Tgene | ACTN1 | P12814 | DB09130 | Copper | Small molecule | Approved|Investigational |
Top |
Related Diseases for SF3B1-ACTN1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | SF3B1 | C0220633 | Uveal melanoma | 4 | CTD_human;ORPHANET |
Hgene | SF3B1 | C0346373 | Malignant melanoma of iris | 2 | ORPHANET |
Hgene | SF3B1 | C0346388 | Malignant melanoma of choroid | 2 | ORPHANET |
Hgene | SF3B1 | C0023434 | Chronic Lymphocytic Leukemia | 1 | CTD_human |
Hgene | SF3B1 | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
Hgene | SF3B1 | C0345967 | Malignant mesothelioma | 1 | CTD_human |
Hgene | SF3B1 | C0376358 | Malignant neoplasm of prostate | 1 | CTD_human |
Hgene | SF3B1 | C1264195 | Refractory anemia with ringed sideroblasts | 1 | ORPHANET |
Tgene | C3554663 | BLEEDING DISORDER, PLATELET-TYPE, 15 | 3 | CTD_human;GENOMICS_ENGLAND;UNIPROT | |
Tgene | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human | |
Tgene | C4304021 | Autosomal dominant macrothrombocytopenia | 1 | ORPHANET |