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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:ANPEP-LTBP4 (FusionGDB2 ID:HG290TG8425) |
Fusion Gene Summary for ANPEP-LTBP4 |
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Fusion gene information | Fusion gene name: ANPEP-LTBP4 | Fusion gene ID: hg290tg8425 | Hgene | Tgene | Gene symbol | ANPEP | LTBP4 | Gene ID | 290 | 8425 |
Gene name | alanyl aminopeptidase, membrane | latent transforming growth factor beta binding protein 4 | |
Synonyms | APN|CD13|GP150|LAP1|P150|PEPN | ARCL1C|LTBP-4|LTBP4L|LTBP4S | |
Cytomap | ('ANPEP')('LTBP4') 15q26.1 | 19q13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | aminopeptidase NAP-MAP-Nalanyl (membrane) aminopeptidaseaminopeptidase MhAPNmembrane alanyl aminopeptidasemicrosomal aminopeptidasemyeloid plasma membrane glycoprotein CD13 | latent-transforming growth factor beta-binding protein 4latent transforming growth factor-beta binding protein 4L | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q8N2S1 | |
Ensembl transtripts involved in fusion gene | ENST00000300060, ENST00000558177, | ||
Fusion gene scores | * DoF score | 3 X 3 X 3=27 | 5 X 7 X 4=140 |
# samples | 3 | 7 | |
** MAII score | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(7/140*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ANPEP [Title/Abstract] AND LTBP4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ANPEP(90348308)-LTBP4(41116437), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | LTBP4 | GO:0030162 | regulation of proteolysis | 9660815 |
![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-CG-5720 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
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Fusion Gene ORF analysis for ANPEP-LTBP4 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-3UTR | ENST00000300060 | ENST00000204005 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
5CDS-3UTR | ENST00000300060 | ENST00000308370 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
5CDS-3UTR | ENST00000300060 | ENST00000396819 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
5CDS-3UTR | ENST00000300060 | ENST00000545697 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
5CDS-3UTR | ENST00000300060 | ENST00000602240 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
5CDS-intron | ENST00000300060 | ENST00000243562 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
intron-3UTR | ENST00000558177 | ENST00000204005 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
intron-3UTR | ENST00000558177 | ENST00000308370 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
intron-3UTR | ENST00000558177 | ENST00000396819 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
intron-3UTR | ENST00000558177 | ENST00000545697 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
intron-3UTR | ENST00000558177 | ENST00000602240 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
intron-intron | ENST00000558177 | ENST00000243562 | ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
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Fusion Genomic Features for ANPEP-LTBP4 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + | 0.005778978 | 0.9942211 |
ANPEP | chr15 | 90348308 | - | LTBP4 | chr19 | 41116437 | + | 0.005778978 | 0.9942211 |
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Fusion Protein Features for ANPEP-LTBP4 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:90348308/:41116437) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | LTBP4 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Key regulator of transforming growth factor beta (TGFB1, TGFB2 and TGFB3) that controls TGF-beta activation by maintaining it in a latent state during storage in extracellular space. Associates specifically via disulfide bonds with the Latency-associated peptide (LAP), which is the regulatory chain of TGF-beta, and regulates integrin-dependent activation of TGF-beta. {ECO:0000250|UniProtKB:Q14766}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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Fusion Gene Sequence for ANPEP-LTBP4 |
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Fusion Gene PPI Analysis for ANPEP-LTBP4 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ANPEP-LTBP4 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ANPEP-LTBP4 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ANPEP | C0005684 | Malignant neoplasm of urinary bladder | 1 | CTD_human |
Hgene | ANPEP | C0005695 | Bladder Neoplasm | 1 | CTD_human |
Hgene | ANPEP | C0041696 | Unipolar Depression | 1 | PSYGENET |
Hgene | ANPEP | C0149821 | ACUTE ALCOHOL WITHDRAWAL | 1 | PSYGENET |
Hgene | ANPEP | C1269683 | Major Depressive Disorder | 1 | PSYGENET |
Tgene | C2750804 | Cutis Laxa With Severe Pulmonary, Gastrointestinal, And Urinary Abnormalities | 3 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT | |
Tgene | C0010495 | Cutis Laxa | 1 | GENOMICS_ENGLAND | |
Tgene | C0013264 | Muscular Dystrophy, Duchenne | 1 | ORPHANET | |
Tgene | C0017636 | Glioblastoma | 1 | CTD_human | |
Tgene | C0027643 | Neoplasm Recurrence, Local | 1 | CTD_human | |
Tgene | C0334588 | Giant Cell Glioblastoma | 1 | CTD_human | |
Tgene | C1621958 | Glioblastoma Multiforme | 1 | CTD_human |