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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:HSD17B4-TNFAIP8 (FusionGDB2 ID:HG3295TG25816) |
Fusion Gene Summary for HSD17B4-TNFAIP8 |
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Fusion gene information | Fusion gene name: HSD17B4-TNFAIP8 | Fusion gene ID: hg3295tg25816 | Hgene | Tgene | Gene symbol | HSD17B4 | TNFAIP8 | Gene ID | 3295 | 25816 |
Gene name | hydroxysteroid 17-beta dehydrogenase 4 | TNF alpha induced protein 8 | |
Synonyms | DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 | GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 | |
Cytomap | ('HSD17B4')('TNFAIP8') 5q23.1 | 5q23.1 | |
Type of gene | protein-coding | protein-coding | |
Description | peroxisomal multifunctional enzyme type 217-beta-HSD 417-beta-HSD IV17-beta-hydroxysteroid dehydrogenase 417beta-estradiol dehydrogenase type IV3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydrataseD-3-hydroxyacyl-CoA dehydratase | tumor necrosis factor alpha-induced protein 8NF-kappa-B-inducible DED-containing proteinTNF-induced protein GG2-1head and neck tumor and metastasis-related proteintumor necrosis factor, alpha induced protein 8 | |
Modification date | 20200327 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000522415, ENST00000256216, ENST00000414835, ENST00000504811, ENST00000509514, ENST00000510025, ENST00000513628, ENST00000515320, | ENST00000522415, ENST00000414835, ENST00000509514, ENST00000513628, ENST00000256216, ENST00000504811, ENST00000510025, ENST00000515320, | |
Fusion gene scores | * DoF score | 4 X 4 X 4=64 | 8 X 5 X 5=200 |
# samples | 5 | 11 | |
** MAII score | log2(5/64*10)=-0.356143810225275 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/200*10)=-0.862496476250065 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: HSD17B4 [Title/Abstract] AND TNFAIP8 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | HSD17B4(118792063)-TNFAIP8(118728511), # samples:2 HSD17B4(118850741)-TNFAIP8(118728511), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | HSD17B4-TNFAIP8 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. HSD17B4-TNFAIP8 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. TNFAIP8-HSD17B4 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. TNFAIP8-HSD17B4 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. HSD17B4-TNFAIP8 seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | HSD17B4 | GO:0006635 | fatty acid beta-oxidation | 10400999 |
Hgene | HSD17B4 | GO:0008209 | androgen metabolic process | 7487879 |
Hgene | HSD17B4 | GO:0008210 | estrogen metabolic process | 7487879 |
Hgene | HSD17B4 | GO:0036111 | very long-chain fatty-acyl-CoA metabolic process | 9482850 |
Hgene | HSD17B4 | GO:0036112 | medium-chain fatty-acyl-CoA metabolic process | 9089413 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | CESC | TCGA-JW-A5VL-01A | HSD17B4 | chr5 | 118792063 | - | TNFAIP8 | chr5 | 118728511 | + |
ChimerDB4 | CESC | TCGA-JW-A5VL-01A | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
ChimerDB4 | STAD | TCGA-CD-A4MH-01A | HSD17B4 | chr5 | 118850741 | - | TNFAIP8 | chr5 | 118728511 | + |
ChimerDB4 | STAD | TCGA-CD-A4MH-01A | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
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Fusion Gene ORF analysis for HSD17B4-TNFAIP8 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000522415 | ENST00000274456 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
3UTR-3CDS | ENST00000522415 | ENST00000503646 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
3UTR-3CDS | ENST00000522415 | ENST00000504642 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
3UTR-3CDS | ENST00000522415 | ENST00000504771 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
3UTR-3CDS | ENST00000522415 | ENST00000513374 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
3UTR-3UTR | ENST00000522415 | ENST00000415806 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
5CDS-3UTR | ENST00000256216 | ENST00000415806 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5CDS-3UTR | ENST00000256216 | ENST00000415806 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
5CDS-3UTR | ENST00000414835 | ENST00000415806 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
5CDS-3UTR | ENST00000504811 | ENST00000415806 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5CDS-3UTR | ENST00000504811 | ENST00000415806 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
5CDS-3UTR | ENST00000509514 | ENST00000415806 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
5CDS-3UTR | ENST00000510025 | ENST00000415806 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
5CDS-3UTR | ENST00000513628 | ENST00000415806 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
5CDS-3UTR | ENST00000515320 | ENST00000415806 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3CDS | ENST00000414835 | ENST00000274456 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3CDS | ENST00000414835 | ENST00000503646 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3CDS | ENST00000414835 | ENST00000504642 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3CDS | ENST00000414835 | ENST00000504771 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3CDS | ENST00000414835 | ENST00000513374 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3CDS | ENST00000510025 | ENST00000274456 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3CDS | ENST00000510025 | ENST00000503646 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3CDS | ENST00000510025 | ENST00000504642 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3CDS | ENST00000510025 | ENST00000504771 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3CDS | ENST00000510025 | ENST00000513374 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3UTR | ENST00000414835 | ENST00000415806 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
5UTR-3UTR | ENST00000510025 | ENST00000415806 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000256216 | ENST00000274456 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000256216 | ENST00000274456 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000256216 | ENST00000503646 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000256216 | ENST00000504642 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000256216 | ENST00000504771 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000256216 | ENST00000504771 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000256216 | ENST00000513374 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000414835 | ENST00000274456 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000414835 | ENST00000503646 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000414835 | ENST00000504642 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000414835 | ENST00000504771 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000414835 | ENST00000513374 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000504811 | ENST00000274456 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000504811 | ENST00000503646 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000504811 | ENST00000503646 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000504811 | ENST00000504642 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000504811 | ENST00000504642 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000504811 | ENST00000504771 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000504811 | ENST00000513374 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000504811 | ENST00000513374 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000509514 | ENST00000274456 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000509514 | ENST00000503646 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000509514 | ENST00000504642 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000509514 | ENST00000504771 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000509514 | ENST00000513374 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000510025 | ENST00000274456 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000510025 | ENST00000503646 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000510025 | ENST00000504642 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000510025 | ENST00000504771 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000510025 | ENST00000513374 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000513628 | ENST00000274456 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000513628 | ENST00000503646 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000513628 | ENST00000504642 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000513628 | ENST00000504771 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000513628 | ENST00000513374 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000515320 | ENST00000274456 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000515320 | ENST00000503646 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000515320 | ENST00000504642 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000515320 | ENST00000504771 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
Frame-shift | ENST00000515320 | ENST00000513374 | HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728511 | + |
In-frame | ENST00000256216 | ENST00000503646 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
In-frame | ENST00000256216 | ENST00000504642 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
In-frame | ENST00000256216 | ENST00000513374 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
In-frame | ENST00000504811 | ENST00000274456 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
In-frame | ENST00000504811 | ENST00000504771 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000509514 | ENST00000274456 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000509514 | ENST00000503646 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000509514 | ENST00000504642 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000509514 | ENST00000504771 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000509514 | ENST00000513374 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000513628 | ENST00000274456 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000513628 | ENST00000503646 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000513628 | ENST00000504642 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000513628 | ENST00000504771 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000513628 | ENST00000513374 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000515320 | ENST00000274456 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000515320 | ENST00000503646 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000515320 | ENST00000504642 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000515320 | ENST00000504771 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000515320 | ENST00000513374 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000522415 | ENST00000274456 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000522415 | ENST00000503646 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000522415 | ENST00000504642 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000522415 | ENST00000504771 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3CDS | ENST00000522415 | ENST00000513374 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3UTR | ENST00000509514 | ENST00000415806 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3UTR | ENST00000513628 | ENST00000415806 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3UTR | ENST00000515320 | ENST00000415806 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
intron-3UTR | ENST00000522415 | ENST00000415806 | HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728511 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
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Fusion Genomic Features for HSD17B4-TNFAIP8 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728510 | + | 7.47E-06 | 0.9999925 |
HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728510 | + | 2.66E-06 | 0.9999974 |
HSD17B4 | chr5 | 118792063 | + | TNFAIP8 | chr5 | 118728510 | + | 7.47E-06 | 0.9999925 |
HSD17B4 | chr5 | 118850741 | + | TNFAIP8 | chr5 | 118728510 | + | 2.66E-06 | 0.9999974 |
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Fusion Protein Features for HSD17B4-TNFAIP8 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr5:118792063/chr5:118728511) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000256216 | + | 2 | 24 | 13_37 | 37 | 737.0 | Nucleotide binding | NAD |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000504811 | + | 2 | 25 | 13_37 | 40 | 762.0 | Nucleotide binding | NAD |
Tgene | TNFAIP8 | chr5:118792063 | chr5:118728511 | ENST00000274456 | 0 | 2 | 49_83 | 0 | 189.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | TNFAIP8 | chr5:118792063 | chr5:118728511 | ENST00000503646 | 1 | 3 | 49_83 | 10 | 199.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | TNFAIP8 | chr5:118792063 | chr5:118728511 | ENST00000504771 | 0 | 2 | 49_83 | 10 | 199.0 | Coiled coil | Ontology_term=ECO:0000255 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000256216 | + | 2 | 24 | 484_600 | 37 | 737.0 | Domain | Note=MaoC-like |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000256216 | + | 2 | 24 | 624_736 | 37 | 737.0 | Domain | Note=SCP2 |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000504811 | + | 2 | 25 | 484_600 | 40 | 762.0 | Domain | Note=MaoC-like |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000504811 | + | 2 | 25 | 624_736 | 40 | 762.0 | Domain | Note=SCP2 |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000515320 | + | 1 | 23 | 484_600 | 0 | 719.0 | Domain | Note=MaoC-like |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000515320 | + | 1 | 23 | 624_736 | 0 | 719.0 | Domain | Note=SCP2 |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000256216 | + | 2 | 24 | 734_736 | 37 | 737.0 | Motif | Microbody targeting signal |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000504811 | + | 2 | 25 | 734_736 | 40 | 762.0 | Motif | Microbody targeting signal |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000515320 | + | 1 | 23 | 734_736 | 0 | 719.0 | Motif | Microbody targeting signal |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000256216 | + | 2 | 24 | 164_168 | 37 | 737.0 | Nucleotide binding | Note=NAD |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000256216 | + | 2 | 24 | 196_199 | 37 | 737.0 | Nucleotide binding | Note=NAD |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000256216 | + | 2 | 24 | 75_76 | 37 | 737.0 | Nucleotide binding | Note=NAD |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000504811 | + | 2 | 25 | 164_168 | 40 | 762.0 | Nucleotide binding | Note=NAD |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000504811 | + | 2 | 25 | 196_199 | 40 | 762.0 | Nucleotide binding | Note=NAD |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000504811 | + | 2 | 25 | 75_76 | 40 | 762.0 | Nucleotide binding | Note=NAD |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000515320 | + | 1 | 23 | 13_37 | 0 | 719.0 | Nucleotide binding | NAD |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000515320 | + | 1 | 23 | 164_168 | 0 | 719.0 | Nucleotide binding | Note=NAD |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000515320 | + | 1 | 23 | 196_199 | 0 | 719.0 | Nucleotide binding | Note=NAD |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000515320 | + | 1 | 23 | 75_76 | 0 | 719.0 | Nucleotide binding | Note=NAD |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000256216 | + | 2 | 24 | 1_305 | 37 | 737.0 | Region | Note=(3R)-hydroxyacyl-CoA dehydrogenase |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000256216 | + | 2 | 24 | 322_622 | 37 | 737.0 | Region | Note=Enoyl-CoA hydratase 2 |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000256216 | + | 2 | 24 | 406_407 | 37 | 737.0 | Region | (3R)-3-hydroxydecanoyl-CoA binding |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000256216 | + | 2 | 24 | 510_515 | 37 | 737.0 | Region | (3R)-3-hydroxydecanoyl-CoA binding |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000504811 | + | 2 | 25 | 1_305 | 40 | 762.0 | Region | Note=(3R)-hydroxyacyl-CoA dehydrogenase |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000504811 | + | 2 | 25 | 322_622 | 40 | 762.0 | Region | Note=Enoyl-CoA hydratase 2 |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000504811 | + | 2 | 25 | 406_407 | 40 | 762.0 | Region | (3R)-3-hydroxydecanoyl-CoA binding |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000504811 | + | 2 | 25 | 510_515 | 40 | 762.0 | Region | (3R)-3-hydroxydecanoyl-CoA binding |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000515320 | + | 1 | 23 | 1_305 | 0 | 719.0 | Region | Note=(3R)-hydroxyacyl-CoA dehydrogenase |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000515320 | + | 1 | 23 | 322_622 | 0 | 719.0 | Region | Note=Enoyl-CoA hydratase 2 |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000515320 | + | 1 | 23 | 406_407 | 0 | 719.0 | Region | (3R)-3-hydroxydecanoyl-CoA binding |
Hgene | HSD17B4 | chr5:118792063 | chr5:118728511 | ENST00000515320 | + | 1 | 23 | 510_515 | 0 | 719.0 | Region | (3R)-3-hydroxydecanoyl-CoA binding |
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Fusion Gene Sequence for HSD17B4-TNFAIP8 |
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Fusion Gene PPI Analysis for HSD17B4-TNFAIP8 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for HSD17B4-TNFAIP8 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for HSD17B4-TNFAIP8 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | HSD17B4 | C0342870 | Bifunctional peroxisomal enzyme deficiency | 12 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Hgene | HSD17B4 | C0685838 | Gonadal dysgenesis XX type deafness | 10 | CLINGEN;CTD_human;GENOMICS_ENGLAND;ORPHANET |
Hgene | HSD17B4 | C0282525 | Adrenoleukodystrophy, Neonatal | 2 | CTD_human |
Hgene | HSD17B4 | C0282526 | Hyperpipecolic Acidemia | 2 | CTD_human |
Hgene | HSD17B4 | C0282528 | Peroxisomal Disorders | 2 | CTD_human |
Hgene | HSD17B4 | C0751708 | Peroxisomal Dysfunction, General | 2 | CTD_human |
Hgene | HSD17B4 | C0751709 | Peroxisomal Dysfunction, Multiple | 2 | CTD_human |
Hgene | HSD17B4 | C0751710 | Peroxisomal Dysfunction, Single | 2 | CTD_human |
Hgene | HSD17B4 | C4551721 | PERRAULT SYNDROME 1 | 2 | GENOMICS_ENGLAND;UNIPROT |
Hgene | HSD17B4 | C0037769 | West Syndrome | 1 | CTD_human |
Hgene | HSD17B4 | C0043459 | Zellweger Syndrome | 1 | CTD_human |
Hgene | HSD17B4 | C0393698 | Cryptogenic Infantile Spasms | 1 | CTD_human |
Hgene | HSD17B4 | C0393699 | Symptomatic Infantile Spasms | 1 | CTD_human |
Hgene | HSD17B4 | C0546878 | Nodding spasm | 1 | CTD_human |
Hgene | HSD17B4 | C0553558 | Jackknife Seizures | 1 | CTD_human |
Hgene | HSD17B4 | C0684276 | Hypsarrhythmia | 1 | CTD_human |
Hgene | HSD17B4 | C0751594 | Zellweger-Like Syndrome | 1 | CTD_human |
Hgene | HSD17B4 | C1384666 | hearing impairment | 1 | GENOMICS_ENGLAND |
Hgene | HSD17B4 | C1527306 | spasmus nutans | 1 | CTD_human |
Hgene | HSD17B4 | C1527366 | Salaam Seizures | 1 | CTD_human |
Hgene | HSD17B4 | C3658299 | Zellweger Spectrum | 1 | CTD_human |
Tgene | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human | |
Tgene | C0027627 | Neoplasm Metastasis | 1 | CTD_human | |
Tgene | C0087031 | Juvenile-Onset Still Disease | 1 | CTD_human | |
Tgene | C0279626 | Squamous cell carcinoma of esophagus | 1 | CTD_human | |
Tgene | C3495559 | Juvenile arthritis | 1 | CTD_human | |
Tgene | C3714758 | Juvenile psoriatic arthritis | 1 | CTD_human | |
Tgene | C4552091 | Polyarthritis, Juvenile, Rheumatoid Factor Negative | 1 | CTD_human | |
Tgene | C4704862 | Polyarthritis, Juvenile, Rheumatoid Factor Positive | 1 | CTD_human |