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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:AGRN-NOC4L (FusionGDB2 ID:HG375790TG79050) |
Fusion Gene Summary for AGRN-NOC4L |
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Fusion gene information | Fusion gene name: AGRN-NOC4L | Fusion gene ID: hg375790tg79050 | Hgene | Tgene | Gene symbol | AGRN | NOC4L | Gene ID | 375790 | 79050 |
Gene name | agrin | nucleolar complex associated 4 homolog | |
Synonyms | AGRIN|CMS8|CMSPPD | NET49|NOC4|UTP19 | |
Cytomap | ('AGRN')('NOC4L') 1p36.33 | 12q24.33 | |
Type of gene | protein-coding | protein-coding | |
Description | agrinagrin proteoglycan | nucleolar complex protein 4 homologNOC4 protein homologNOC4-like proteinnucleolar complex-associated protein 4-like protein | |
Modification date | 20200315 | 20200313 | |
UniProtAcc | . | Q9BVI4 | |
Ensembl transtripts involved in fusion gene | ENST00000477585, ENST00000379370, | ||
Fusion gene scores | * DoF score | 14 X 7 X 10=980 | 36 X 4 X 20=2880 |
# samples | 18 | 41 | |
** MAII score | log2(18/980*10)=-2.4447848426729 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(41/2880*10)=-2.81237299682423 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: AGRN [Title/Abstract] AND NOC4L [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | AGRN(970704)-NOC4L(132635526), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | AGRN-NOC4L seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. AGRN-NOC4L seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. AGRN-NOC4L seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. AGRN-NOC4L seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | AGRN | GO:0043113 | receptor clustering | 15340048 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-BH-A0DK-01A | AGRN | chr1 | 970704 | - | NOC4L | chr12 | 132635526 | + |
ChimerDB4 | KIRC | TCGA-B8-A54I-01A | AGRN | chr1 | 957842 | + | NOC4L | chr12 | 132635526 | + |
ChimerDB4 | LUSC | TCGA-39-5029-01A | AGRN | chr1 | 970704 | - | NOC4L | chr12 | 132635526 | + |
ChimerDB4 | STAD | TCGA-CG-5723 | AGRN | chr1 | 970704 | + | NOC4L | chr12 | 132635525 | + |
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Fusion Gene ORF analysis for AGRN-NOC4L |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000477585 | ENST00000330579 | AGRN | chr1 | 970704 | - | NOC4L | chr12 | 132635526 | + |
3UTR-3CDS | ENST00000477585 | ENST00000330579 | AGRN | chr1 | 970704 | + | NOC4L | chr12 | 132635525 | + |
3UTR-5UTR | ENST00000477585 | ENST00000538784 | AGRN | chr1 | 970704 | - | NOC4L | chr12 | 132635526 | + |
3UTR-5UTR | ENST00000477585 | ENST00000538784 | AGRN | chr1 | 970704 | + | NOC4L | chr12 | 132635525 | + |
3UTR-intron | ENST00000477585 | ENST00000535343 | AGRN | chr1 | 970704 | - | NOC4L | chr12 | 132635526 | + |
3UTR-intron | ENST00000477585 | ENST00000535343 | AGRN | chr1 | 970704 | + | NOC4L | chr12 | 132635525 | + |
5CDS-5UTR | ENST00000379370 | ENST00000538784 | AGRN | chr1 | 957842 | + | NOC4L | chr12 | 132635526 | + |
5CDS-5UTR | ENST00000379370 | ENST00000538784 | AGRN | chr1 | 970704 | - | NOC4L | chr12 | 132635526 | + |
5CDS-5UTR | ENST00000379370 | ENST00000538784 | AGRN | chr1 | 970704 | + | NOC4L | chr12 | 132635525 | + |
5CDS-intron | ENST00000379370 | ENST00000535343 | AGRN | chr1 | 957842 | + | NOC4L | chr12 | 132635526 | + |
5CDS-intron | ENST00000379370 | ENST00000535343 | AGRN | chr1 | 970704 | - | NOC4L | chr12 | 132635526 | + |
5CDS-intron | ENST00000379370 | ENST00000535343 | AGRN | chr1 | 970704 | + | NOC4L | chr12 | 132635525 | + |
In-frame | ENST00000379370 | ENST00000330579 | AGRN | chr1 | 957842 | + | NOC4L | chr12 | 132635526 | + |
In-frame | ENST00000379370 | ENST00000330579 | AGRN | chr1 | 970704 | - | NOC4L | chr12 | 132635526 | + |
In-frame | ENST00000379370 | ENST00000330579 | AGRN | chr1 | 970704 | + | NOC4L | chr12 | 132635525 | + |
intron-3CDS | ENST00000477585 | ENST00000330579 | AGRN | chr1 | 957842 | + | NOC4L | chr12 | 132635526 | + |
intron-5UTR | ENST00000477585 | ENST00000538784 | AGRN | chr1 | 957842 | + | NOC4L | chr12 | 132635526 | + |
intron-intron | ENST00000477585 | ENST00000535343 | AGRN | chr1 | 957842 | + | NOC4L | chr12 | 132635526 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000379370 | AGRN | chr1 | 970704 | + | ENST00000330579 | NOC4L | chr12 | 132635525 | + | 1251 | 561 | 1192 | 2 | 397 |
ENST00000379370 | AGRN | chr1 | 957842 | + | ENST00000330579 | NOC4L | chr12 | 132635526 | + | 1203 | 513 | 1144 | 2 | 381 |
ENST00000379370 | AGRN | chr1 | 970704 | - | ENST00000330579 | NOC4L | chr12 | 132635526 | + | 1251 | 561 | 1192 | 2 | 397 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000379370 | ENST00000330579 | AGRN | chr1 | 970704 | + | NOC4L | chr12 | 132635525 | + | 0.01224119 | 0.9877588 |
ENST00000379370 | ENST00000330579 | AGRN | chr1 | 957842 | + | NOC4L | chr12 | 132635526 | + | 0.008579757 | 0.99142027 |
ENST00000379370 | ENST00000330579 | AGRN | chr1 | 970704 | - | NOC4L | chr12 | 132635526 | + | 0.01224119 | 0.9877588 |
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Fusion Genomic Features for AGRN-NOC4L |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
AGRN | chr1 | 970704 | + | NOC4L | chr12 | 132635525 | + | 0.000739436 | 0.9992606 |
AGRN | chr1 | 957842 | + | NOC4L | chr12 | 132635525 | + | 8.00E-06 | 0.999992 |
AGRN | chr1 | 970704 | + | NOC4L | chr12 | 132635525 | + | 0.000739436 | 0.9992606 |
AGRN | chr1 | 957842 | + | NOC4L | chr12 | 132635525 | + | 8.00E-06 | 0.999992 |
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Fusion Protein Features for AGRN-NOC4L |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:970704/chr12:132635526) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | NOC4L |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 30_157 | 154 | 2046.0 | Domain | NtA |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 30_157 | 170 | 2046.0 | Domain | NtA |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 30_157 | 170 | 2046.0 | Domain | NtA |
Tgene | NOC4L | chr1:957842 | chr12:132635526 | ENST00000330579 | 8 | 15 | 347_367 | 300 | 517.0 | Transmembrane | Helical | |
Tgene | NOC4L | chr1:957842 | chr12:132635526 | ENST00000330579 | 8 | 15 | 375_395 | 300 | 517.0 | Transmembrane | Helical | |
Tgene | NOC4L | chr1:970704 | chr12:132635525 | ENST00000330579 | 8 | 15 | 347_367 | 300 | 517.0 | Transmembrane | Helical | |
Tgene | NOC4L | chr1:970704 | chr12:132635525 | ENST00000330579 | 8 | 15 | 375_395 | 300 | 517.0 | Transmembrane | Helical | |
Tgene | NOC4L | chr1:970704 | chr12:132635526 | ENST00000330579 | 8 | 15 | 347_367 | 300 | 517.0 | Transmembrane | Helical | |
Tgene | NOC4L | chr1:970704 | chr12:132635526 | ENST00000330579 | 8 | 15 | 375_395 | 300 | 517.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 1941_2009 | 154 | 2046.0 | Calcium binding | Ontology_term=ECO:0000250 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 1941_2009 | 170 | 2046.0 | Calcium binding | Ontology_term=ECO:0000250 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 1941_2009 | 170 | 2046.0 | Calcium binding | Ontology_term=ECO:0000250 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 1058_1097 | 154 | 2046.0 | Compositional bias | Note=Gly/Ser-rich |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 1254_1324 | 154 | 2046.0 | Compositional bias | Note=Ser/Thr-rich |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 671_677 | 154 | 2046.0 | Compositional bias | Note=Gly/Ser-rich |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 974_1099 | 154 | 2046.0 | Compositional bias | Note=Ser/Thr-rich |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 1058_1097 | 170 | 2046.0 | Compositional bias | Note=Gly/Ser-rich |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 1254_1324 | 170 | 2046.0 | Compositional bias | Note=Ser/Thr-rich |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 671_677 | 170 | 2046.0 | Compositional bias | Note=Gly/Ser-rich |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 974_1099 | 170 | 2046.0 | Compositional bias | Note=Ser/Thr-rich |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 1058_1097 | 170 | 2046.0 | Compositional bias | Note=Gly/Ser-rich |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 1254_1324 | 170 | 2046.0 | Compositional bias | Note=Ser/Thr-rich |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 671_677 | 170 | 2046.0 | Compositional bias | Note=Gly/Ser-rich |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 974_1099 | 170 | 2046.0 | Compositional bias | Note=Ser/Thr-rich |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 1130_1252 | 154 | 2046.0 | Domain | SEA |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 1329_1367 | 154 | 2046.0 | Domain | EGF-like 1 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 1372_1548 | 154 | 2046.0 | Domain | Laminin G-like 1 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 1549_1586 | 154 | 2046.0 | Domain | EGF-like 2 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 1588_1625 | 154 | 2046.0 | Domain | EGF-like 3 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 1635_1822 | 154 | 2046.0 | Domain | Laminin G-like 2 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 1818_1857 | 154 | 2046.0 | Domain | EGF-like 4 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 1868_2065 | 154 | 2046.0 | Domain | Laminin G-like 3 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 191_244 | 154 | 2046.0 | Domain | Kazal-like 1 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 264_319 | 154 | 2046.0 | Domain | Kazal-like 2 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 337_391 | 154 | 2046.0 | Domain | Kazal-like 3 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 408_463 | 154 | 2046.0 | Domain | Kazal-like 4 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 484_536 | 154 | 2046.0 | Domain | Kazal-like 5 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 540_601 | 154 | 2046.0 | Domain | Kazal-like 6 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 607_666 | 154 | 2046.0 | Domain | Kazal-like 7 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 699_752 | 154 | 2046.0 | Domain | Kazal-like 8 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 793_846 | 154 | 2046.0 | Domain | Laminin EGF-like 1 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 847_893 | 154 | 2046.0 | Domain | Laminin EGF-like 2 |
Hgene | AGRN | chr1:957842 | chr12:132635526 | ENST00000379370 | + | 2 | 36 | 917_971 | 154 | 2046.0 | Domain | Kazal-like 9 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 1130_1252 | 170 | 2046.0 | Domain | SEA |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 1329_1367 | 170 | 2046.0 | Domain | EGF-like 1 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 1372_1548 | 170 | 2046.0 | Domain | Laminin G-like 1 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 1549_1586 | 170 | 2046.0 | Domain | EGF-like 2 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 1588_1625 | 170 | 2046.0 | Domain | EGF-like 3 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 1635_1822 | 170 | 2046.0 | Domain | Laminin G-like 2 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 1818_1857 | 170 | 2046.0 | Domain | EGF-like 4 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 1868_2065 | 170 | 2046.0 | Domain | Laminin G-like 3 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 191_244 | 170 | 2046.0 | Domain | Kazal-like 1 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 264_319 | 170 | 2046.0 | Domain | Kazal-like 2 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 337_391 | 170 | 2046.0 | Domain | Kazal-like 3 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 408_463 | 170 | 2046.0 | Domain | Kazal-like 4 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 484_536 | 170 | 2046.0 | Domain | Kazal-like 5 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 540_601 | 170 | 2046.0 | Domain | Kazal-like 6 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 607_666 | 170 | 2046.0 | Domain | Kazal-like 7 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 699_752 | 170 | 2046.0 | Domain | Kazal-like 8 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 793_846 | 170 | 2046.0 | Domain | Laminin EGF-like 1 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 847_893 | 170 | 2046.0 | Domain | Laminin EGF-like 2 |
Hgene | AGRN | chr1:970704 | chr12:132635525 | ENST00000379370 | + | 3 | 36 | 917_971 | 170 | 2046.0 | Domain | Kazal-like 9 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 1130_1252 | 170 | 2046.0 | Domain | SEA |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 1329_1367 | 170 | 2046.0 | Domain | EGF-like 1 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 1372_1548 | 170 | 2046.0 | Domain | Laminin G-like 1 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 1549_1586 | 170 | 2046.0 | Domain | EGF-like 2 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 1588_1625 | 170 | 2046.0 | Domain | EGF-like 3 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 1635_1822 | 170 | 2046.0 | Domain | Laminin G-like 2 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 1818_1857 | 170 | 2046.0 | Domain | EGF-like 4 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 1868_2065 | 170 | 2046.0 | Domain | Laminin G-like 3 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 191_244 | 170 | 2046.0 | Domain | Kazal-like 1 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 264_319 | 170 | 2046.0 | Domain | Kazal-like 2 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 337_391 | 170 | 2046.0 | Domain | Kazal-like 3 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 408_463 | 170 | 2046.0 | Domain | Kazal-like 4 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 484_536 | 170 | 2046.0 | Domain | Kazal-like 5 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 540_601 | 170 | 2046.0 | Domain | Kazal-like 6 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 607_666 | 170 | 2046.0 | Domain | Kazal-like 7 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 699_752 | 170 | 2046.0 | Domain | Kazal-like 8 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 793_846 | 170 | 2046.0 | Domain | Laminin EGF-like 1 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 847_893 | 170 | 2046.0 | Domain | Laminin EGF-like 2 |
Hgene | AGRN | chr1:970704 | chr12:132635526 | ENST00000379370 | - | 3 | 36 | 917_971 | 170 | 2046.0 | Domain | Kazal-like 9 |
Tgene | NOC4L | chr1:957842 | chr12:132635526 | ENST00000330579 | 8 | 15 | 297_317 | 300 | 517.0 | Transmembrane | Helical | |
Tgene | NOC4L | chr1:970704 | chr12:132635525 | ENST00000330579 | 8 | 15 | 297_317 | 300 | 517.0 | Transmembrane | Helical | |
Tgene | NOC4L | chr1:970704 | chr12:132635526 | ENST00000330579 | 8 | 15 | 297_317 | 300 | 517.0 | Transmembrane | Helical |
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Fusion Gene Sequence for AGRN-NOC4L |
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>3003_3003_1_AGRN-NOC4L_AGRN_chr1_957842_ENST00000379370_NOC4L_chr12_132635526_ENST00000330579_length(transcript)=1203nt_BP=513nt CCCGTCCCCGGCGCGGCCCGCGCGCTCCTCCGCCGCCTCTCGCCTGCGCCATGGCCGGCCGGTCCCACCCGGGCCCGCTGCGGCCGCTGC TGCCGCTCCTTGTGGTGGCCGCGTGCGTCCTGCCCGGAGCCGGCGGGACATGCCCGGAGCGCGCGCTGGAGCGGCGCGAGGAGGAGGCGA ACGTGGTGCTCACCGGGACGGTGGAGGAGATCCTCAACGTGGACCCGGTGCAGCACACGTACTCCTGCAAGGTTCGGGTCTGGCGGTACT TGAAGGGCAAAGACCTGGTGGCCCGGGAGAGCCTGCTGGACGGCGGCAACAAGGTGGTGATCAGCGGCTTTGGAGACCCCCTCATCTGTG ACAACCAGGTGTCCACTGGGGACACCAGGATCTTCTTTGTGAACCCTGCACCCCCATACCTGTGGCCAGCCCACAAGAACGAGCTGATGC TCAACTCCAGCCTCATGCGGATCACCCTGCGGAACCTGGAGGAGGTGGAGTTCTGTGTGGAAGGGGGGGCCCTCAGCCTCTTGGCCTTGA ACGGGCTGTTCATCTTGATTCACAAACACAACCTGGAGTACCCTGACTTCTACCGGAAGCTCTACGGCCTCTTGGACCCCTCTGTCTTTC ACGTCAAGTACCGCGCCCGCTTCTTCCACCTGGCTGACCTCTTCCTGTCCTCCTCCCACCTCCCCGCCTACCTGGTGGCCGCCTTCGCCA AGCGGCTGGCCCGCCTGGCCCTGACGGCTCCCCCTGAGGCCCTGCTCATGGTCCTGCCTTTCATCTGTAACCTGCTGCGCCGGCACCCTG CCTGCCGGGTCCTCGTGCACCGTCCACACGGCCCTGAGTTGGACGCCGACCCCTACGACCCTGGAGAGGAGGACCCAGCCCAGAGCCGGG CCTTGGAGAGCTCCCTGTGGGAGCTTCAGGCCCTCCAGCGCCACTACCACCCTGAGGTGTCCAAAGCCGCCAGCGTCATCAACCAGGCCC TGTCCATGCCTGAGGTCAGCATCGCGCCACTGCTGGAGCTCACGGCCTACGAGATCTTTGAGCGGGACCTGAAGAAGAAGGGGCCCGAGC CGGTGCCACTGGAGTTTATCCCAGCCCAGGGCCTGCTGGGACGGCCGGGTGAACTCTGTGCCCAGCACTTCACGCTCAGCTGACCCTGGC >3003_3003_1_AGRN-NOC4L_AGRN_chr1_957842_ENST00000379370_NOC4L_chr12_132635526_ENST00000330579_length(amino acids)=381AA_BP=1 MGTEFTRPSQQALGWDKLQWHRLGPLLLQVPLKDLVGRELQQWRDADLRHGQGLVDDAGGFGHLRVVVALEGLKLPQGALQGPALGWVLL SRVVGVGVQLRAVWTVHEDPAGRVPAQQVTDERQDHEQGLRGSRQGQAGQPLGEGGHQVGGEVGGGQEEVSQVEEAGAVLDVKDRGVQEA VELPVEVRVLQVVFVNQDEQPVQGQEAEGPPFHTELHLLQVPQGDPHEAGVEHQLVLVGWPQVWGCRVHKEDPGVPSGHLVVTDEGVSKA ADHHLVAAVQQALPGHQVFALQVPPDPNLAGVRVLHRVHVEDLLHRPGEHHVRLLLAPLQRALRACPAGSGQDARGHHKERQQRPQRARV -------------------------------------------------------------- >3003_3003_2_AGRN-NOC4L_AGRN_chr1_970704_ENST00000379370_NOC4L_chr12_132635525_ENST00000330579_length(transcript)=1251nt_BP=561nt CCCGTCCCCGGCGCGGCCCGCGCGCTCCTCCGCCGCCTCTCGCCTGCGCCATGGCCGGCCGGTCCCACCCGGGCCCGCTGCGGCCGCTGC TGCCGCTCCTTGTGGTGGCCGCGTGCGTCCTGCCCGGAGCCGGCGGGACATGCCCGGAGCGCGCGCTGGAGCGGCGCGAGGAGGAGGCGA ACGTGGTGCTCACCGGGACGGTGGAGGAGATCCTCAACGTGGACCCGGTGCAGCACACGTACTCCTGCAAGGTTCGGGTCTGGCGGTACT TGAAGGGCAAAGACCTGGTGGCCCGGGAGAGCCTGCTGGACGGCGGCAACAAGGTGGTGATCAGCGGCTTTGGAGACCCCCTCATCTGTG ACAACCAGGTGTCCACTGGGGACACCAGGATCTTCTTTGTGAACCCTGCACCCCCATACCTGTGGCCAGCCCACAAGAACGAGCTGATGC TCAACTCCAGCCTCATGCGGATCACCCTGCGGAACCTGGAGGAGGTGGAGTTCTGTGTGGAAGATAAACCCGGGACCCACTTCACTCCAG TGCCTCCGACGCCTCCTGATGGGGGGGCCCTCAGCCTCTTGGCCTTGAACGGGCTGTTCATCTTGATTCACAAACACAACCTGGAGTACC CTGACTTCTACCGGAAGCTCTACGGCCTCTTGGACCCCTCTGTCTTTCACGTCAAGTACCGCGCCCGCTTCTTCCACCTGGCTGACCTCT TCCTGTCCTCCTCCCACCTCCCCGCCTACCTGGTGGCCGCCTTCGCCAAGCGGCTGGCCCGCCTGGCCCTGACGGCTCCCCCTGAGGCCC TGCTCATGGTCCTGCCTTTCATCTGTAACCTGCTGCGCCGGCACCCTGCCTGCCGGGTCCTCGTGCACCGTCCACACGGCCCTGAGTTGG ACGCCGACCCCTACGACCCTGGAGAGGAGGACCCAGCCCAGAGCCGGGCCTTGGAGAGCTCCCTGTGGGAGCTTCAGGCCCTCCAGCGCC ACTACCACCCTGAGGTGTCCAAAGCCGCCAGCGTCATCAACCAGGCCCTGTCCATGCCTGAGGTCAGCATCGCGCCACTGCTGGAGCTCA CGGCCTACGAGATCTTTGAGCGGGACCTGAAGAAGAAGGGGCCCGAGCCGGTGCCACTGGAGTTTATCCCAGCCCAGGGCCTGCTGGGAC >3003_3003_2_AGRN-NOC4L_AGRN_chr1_970704_ENST00000379370_NOC4L_chr12_132635525_ENST00000330579_length(amino acids)=397AA_BP=1 MGTEFTRPSQQALGWDKLQWHRLGPLLLQVPLKDLVGRELQQWRDADLRHGQGLVDDAGGFGHLRVVVALEGLKLPQGALQGPALGWVLL SRVVGVGVQLRAVWTVHEDPAGRVPAQQVTDERQDHEQGLRGSRQGQAGQPLGEGGHQVGGEVGGGQEEVSQVEEAGAVLDVKDRGVQEA VELPVEVRVLQVVFVNQDEQPVQGQEAEGPPIRRRRRHWSEVGPGFIFHTELHLLQVPQGDPHEAGVEHQLVLVGWPQVWGCRVHKEDPG VPSGHLVVTDEGVSKAADHHLVAAVQQALPGHQVFALQVPPDPNLAGVRVLHRVHVEDLLHRPGEHHVRLLLAPLQRALRACPAGSGQDA -------------------------------------------------------------- >3003_3003_3_AGRN-NOC4L_AGRN_chr1_970704_ENST00000379370_NOC4L_chr12_132635526_ENST00000330579_length(transcript)=1251nt_BP=561nt CCCGTCCCCGGCGCGGCCCGCGCGCTCCTCCGCCGCCTCTCGCCTGCGCCATGGCCGGCCGGTCCCACCCGGGCCCGCTGCGGCCGCTGC TGCCGCTCCTTGTGGTGGCCGCGTGCGTCCTGCCCGGAGCCGGCGGGACATGCCCGGAGCGCGCGCTGGAGCGGCGCGAGGAGGAGGCGA ACGTGGTGCTCACCGGGACGGTGGAGGAGATCCTCAACGTGGACCCGGTGCAGCACACGTACTCCTGCAAGGTTCGGGTCTGGCGGTACT TGAAGGGCAAAGACCTGGTGGCCCGGGAGAGCCTGCTGGACGGCGGCAACAAGGTGGTGATCAGCGGCTTTGGAGACCCCCTCATCTGTG ACAACCAGGTGTCCACTGGGGACACCAGGATCTTCTTTGTGAACCCTGCACCCCCATACCTGTGGCCAGCCCACAAGAACGAGCTGATGC TCAACTCCAGCCTCATGCGGATCACCCTGCGGAACCTGGAGGAGGTGGAGTTCTGTGTGGAAGATAAACCCGGGACCCACTTCACTCCAG TGCCTCCGACGCCTCCTGATGGGGGGGCCCTCAGCCTCTTGGCCTTGAACGGGCTGTTCATCTTGATTCACAAACACAACCTGGAGTACC CTGACTTCTACCGGAAGCTCTACGGCCTCTTGGACCCCTCTGTCTTTCACGTCAAGTACCGCGCCCGCTTCTTCCACCTGGCTGACCTCT TCCTGTCCTCCTCCCACCTCCCCGCCTACCTGGTGGCCGCCTTCGCCAAGCGGCTGGCCCGCCTGGCCCTGACGGCTCCCCCTGAGGCCC TGCTCATGGTCCTGCCTTTCATCTGTAACCTGCTGCGCCGGCACCCTGCCTGCCGGGTCCTCGTGCACCGTCCACACGGCCCTGAGTTGG ACGCCGACCCCTACGACCCTGGAGAGGAGGACCCAGCCCAGAGCCGGGCCTTGGAGAGCTCCCTGTGGGAGCTTCAGGCCCTCCAGCGCC ACTACCACCCTGAGGTGTCCAAAGCCGCCAGCGTCATCAACCAGGCCCTGTCCATGCCTGAGGTCAGCATCGCGCCACTGCTGGAGCTCA CGGCCTACGAGATCTTTGAGCGGGACCTGAAGAAGAAGGGGCCCGAGCCGGTGCCACTGGAGTTTATCCCAGCCCAGGGCCTGCTGGGAC >3003_3003_3_AGRN-NOC4L_AGRN_chr1_970704_ENST00000379370_NOC4L_chr12_132635526_ENST00000330579_length(amino acids)=397AA_BP=1 MGTEFTRPSQQALGWDKLQWHRLGPLLLQVPLKDLVGRELQQWRDADLRHGQGLVDDAGGFGHLRVVVALEGLKLPQGALQGPALGWVLL SRVVGVGVQLRAVWTVHEDPAGRVPAQQVTDERQDHEQGLRGSRQGQAGQPLGEGGHQVGGEVGGGQEEVSQVEEAGAVLDVKDRGVQEA VELPVEVRVLQVVFVNQDEQPVQGQEAEGPPIRRRRRHWSEVGPGFIFHTELHLLQVPQGDPHEAGVEHQLVLVGWPQVWGCRVHKEDPG VPSGHLVVTDEGVSKAADHHLVAAVQQALPGHQVFALQVPPDPNLAGVRVLHRVHVEDLLHRPGEHHVRLLLAPLQRALRACPAGSGQDA -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for AGRN-NOC4L |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for AGRN-NOC4L |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for AGRN-NOC4L |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | AGRN | C3808739 | MYASTHENIC SYNDROME, CONGENITAL, 8 | 3 | GENOMICS_ENGLAND;UNIPROT |
Hgene | AGRN | C0751883 | Congenital Myasthenic Syndromes, Postsynaptic | 2 | CTD_human;ORPHANET |
Hgene | AGRN | C0751884 | Congenital Myasthenic Syndromes, Presynaptic | 2 | CTD_human;ORPHANET |
Hgene | AGRN | C0023467 | Leukemia, Myelocytic, Acute | 1 | CTD_human |
Hgene | AGRN | C0026998 | Acute Myeloid Leukemia, M1 | 1 | CTD_human |
Hgene | AGRN | C0751882 | Myasthenic Syndromes, Congenital | 1 | CTD_human;GENOMICS_ENGLAND |
Hgene | AGRN | C1879321 | Acute Myeloid Leukemia (AML-M2) | 1 | CTD_human |