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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:ATP2B3-PSMD1 (FusionGDB2 ID:HG492TG5707)

Fusion Gene Summary for ATP2B3-PSMD1

check button Fusion gene summary
Fusion gene informationFusion gene name: ATP2B3-PSMD1
Fusion gene ID: hg492tg5707
HgeneTgene
Gene symbol

ATP2B3

PSMD1

Gene ID

492

5707

Gene nameATPase plasma membrane Ca2+ transporting 3proteasome 26S subunit, non-ATPase 1
SynonymsCFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1P112|Rpn2|S1
Cytomap('ATP2B3')('PSMD1')

Xq28

2q37.1

Type of geneprotein-codingprotein-coding
Descriptionplasma membrane calcium-transporting ATPase 3ATPase, Ca++ transporting, plasma membrane 3cilia and flagella associated protein 39plasma membrane calcium ATPaseplasma membrane calcium pump26S proteasome non-ATPase regulatory subunit 126S proteasome regulatory subunit RPN226S proteasome regulatory subunit S126S proteasome subunit p112proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
Modification date2020031320200313
UniProtAcc

Q16720

.
Ensembl transtripts involved in fusion geneENST00000359149, ENST00000370181, 
ENST00000370186, ENST00000393842, 
ENST00000263519, ENST00000349466, 
ENST00000460549, 
Fusion gene scores* DoF score2 X 2 X 2=818 X 19 X 12=4104
# samples 225
** MAII scorelog2(2/8*10)=1.32192809488736log2(25/4104*10)=-4.03703073094497
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: ATP2B3 [Title/Abstract] AND PSMD1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointATP2B3(152835166)-PSMD1(232030589), # samples:1
Anticipated loss of major functional domain due to fusion event.ATP2B3-PSMD1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
ATP2B3-PSMD1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
ATP2B3-PSMD1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
ATP2B3-PSMD1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
ATP2B3-PSMD1 seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF.
ATP2B3-PSMD1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
ATP2B3-PSMD1 seems lost the major protein functional domain in Hgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
ATP2B3-PSMD1 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF.
ATP2B3-PSMD1 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneATP2B3

GO:0051480

regulation of cytosolic calcium ion concentration

18029012

HgeneATP2B3

GO:1990034

calcium ion export across plasma membrane

18029012


check buttonFusion gene breakpoints across ATP2B3 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure
check buttonFusion gene breakpoints across PSMD1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand


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Fusion Gene ORF analysis for ATP2B3-PSMD1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000393842ENST00000373635ATP2B3chrX152835166-PSMD1chr2232030589+0.0044181940.9955818
ENST00000393842ENST00000308696ATP2B3chrX152835166-PSMD1chr2232030589+0.0043511570.9956488
ENST00000393842ENST00000409643ATP2B3chrX152835166-PSMD1chr2232030589+0.0048097780.99519026

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Fusion Genomic Features for ATP2B3-PSMD1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

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Fusion Protein Features for ATP2B3-PSMD1


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chrX:152835166/chr2:232030589)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ATP2B3

Q16720

.
FUNCTION: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgenePSMD1chrX:152835166chr2:232030589ENST000003086962125936_943856992.3333333333334Compositional biasNote=Poly-Glu
TgenePSMD1chrX:152835166chr2:232030589ENST000003736352024936_943825960.3333333333334Compositional biasNote=Poly-Glu
TgenePSMD1chrX:152835166chr2:232030589ENST000004096432023936_943825923.0Compositional biasNote=Poly-Glu

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-1201174_117901221.0Compositional biasNote=Poly-Pro
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120297_30001221.0Compositional biasNote=Poly-Glu
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-1211174_117901221.0Compositional biasNote=Poly-Pro
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121297_30001221.0Compositional biasNote=Poly-Glu
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-1211174_117901174.0Compositional biasNote=Poly-Pro
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121297_30001174.0Compositional biasNote=Poly-Glu
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-1201174_117901160.0Compositional biasNote=Poly-Pro
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120297_30001160.0Compositional biasNote=Poly-Glu
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-1211174_117901160.0Compositional biasNote=Poly-Pro
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121297_30001160.0Compositional biasNote=Poly-Glu
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-1201174_117901155.0Compositional biasNote=Poly-Pro
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120297_30001155.0Compositional biasNote=Poly-Glu
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-1201097_111401221.0RegionCalmodulin-binding subdomain A
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-1201115_112401221.0RegionCalmodulin-binding subdomain B
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-1211097_111401221.0RegionCalmodulin-binding subdomain A
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-1211115_112401221.0RegionCalmodulin-binding subdomain B
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-1211097_111401174.0RegionCalmodulin-binding subdomain A
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-1211115_112401174.0RegionCalmodulin-binding subdomain B
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-1201097_111401160.0RegionCalmodulin-binding subdomain A
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-1201115_112401160.0RegionCalmodulin-binding subdomain B
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-1211097_111401160.0RegionCalmodulin-binding subdomain A
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-1211115_112401160.0RegionCalmodulin-binding subdomain B
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-1201097_111401155.0RegionCalmodulin-binding subdomain A
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-1201115_112401155.0RegionCalmodulin-binding subdomain B
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-1201025_103401221.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-1201057_122001221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120119_15501221.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120177_36401221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-1201_9701221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120385_41701221.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120436_84901221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120870_87901221.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120901_92001221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120944_96101221.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120984_100201221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-1211025_103401221.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-1211057_122001221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121119_15501221.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121177_36401221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-1211_9701221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121385_41701221.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121436_84901221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121870_87901221.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121901_92001221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121944_96101221.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121984_100201221.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-1211025_103401174.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-1211057_122001174.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121119_15501174.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121177_36401174.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-1211_9701174.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121385_41701174.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121436_84901174.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121870_87901174.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121901_92001174.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121944_96101174.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121984_100201174.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-1201025_103401160.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-1201057_122001160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120119_15501160.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120177_36401160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-1201_9701160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120385_41701160.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120436_84901160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120870_87901160.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120901_92001160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120944_96101160.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120984_100201160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-1211025_103401160.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-1211057_122001160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121119_15501160.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121177_36401160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-1211_9701160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121385_41701160.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121436_84901160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121870_87901160.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121901_92001160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121944_96101160.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121984_100201160.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-1201025_103401155.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-1201057_122001155.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120119_15501155.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120177_36401155.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-1201_9701155.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120385_41701155.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120436_84901155.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120870_87901155.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120901_92001155.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120944_96101155.0Topological domainExtracellular
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120984_100201155.0Topological domainCytoplasmic
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-1201003_102401221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-1201035_105601221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120156_17601221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120365_38401221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120418_43501221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120850_86901221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120880_90001221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120921_94301221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-120962_98301221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000263519-12098_11801221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-1211003_102401221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-1211035_105601221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121156_17601221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121365_38401221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121418_43501221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121850_86901221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121880_90001221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121921_94301221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-121962_98301221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000349466-12198_11801221.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-1211003_102401174.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-1211035_105601174.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121156_17601174.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121365_38401174.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121418_43501174.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121850_86901174.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121880_90001174.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121921_94301174.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-121962_98301174.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000359149-12198_11801174.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-1201003_102401160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-1201035_105601160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120156_17601160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120365_38401160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120418_43501160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120850_86901160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120880_90001160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120921_94301160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-120962_98301160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370181-12098_11801160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-1211003_102401160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-1211035_105601160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121156_17601160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121365_38401160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121418_43501160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121850_86901160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121880_90001160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121921_94301160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-121962_98301160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000370186-12198_11801160.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-1201003_102401155.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-1201035_105601155.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120156_17601155.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120365_38401155.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120418_43501155.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120850_86901155.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120880_90001155.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120921_94301155.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-120962_98301155.0TransmembraneHelical
HgeneATP2B3chrX:152835166chr2:232030589ENST00000393842-12098_11801155.0TransmembraneHelical
TgenePSMD1chrX:152835166chr2:232030589ENST000003086962125403_436856992.3333333333334RepeatNote=PC 1
TgenePSMD1chrX:152835166chr2:232030589ENST000003086962125441_474856992.3333333333334RepeatNote=PC 2
TgenePSMD1chrX:152835166chr2:232030589ENST000003086962125476_510856992.3333333333334RepeatNote=PC 3
TgenePSMD1chrX:152835166chr2:232030589ENST000003086962125511_545856992.3333333333334RepeatNote=PC 4
TgenePSMD1chrX:152835166chr2:232030589ENST000003086962125547_580856992.3333333333334RepeatNote=PC 5
TgenePSMD1chrX:152835166chr2:232030589ENST000003086962125581_616856992.3333333333334RepeatNote=PC 6
TgenePSMD1chrX:152835166chr2:232030589ENST000003086962125617_649856992.3333333333334RepeatNote=PC 7
TgenePSMD1chrX:152835166chr2:232030589ENST000003086962125651_685856992.3333333333334RepeatNote=PC 8
TgenePSMD1chrX:152835166chr2:232030589ENST000003086962125686_726856992.3333333333334RepeatNote=PC 9
TgenePSMD1chrX:152835166chr2:232030589ENST000003086962125729_761856992.3333333333334RepeatNote=PC 10
TgenePSMD1chrX:152835166chr2:232030589ENST000003736352024403_436825960.3333333333334RepeatNote=PC 1
TgenePSMD1chrX:152835166chr2:232030589ENST000003736352024441_474825960.3333333333334RepeatNote=PC 2
TgenePSMD1chrX:152835166chr2:232030589ENST000003736352024476_510825960.3333333333334RepeatNote=PC 3
TgenePSMD1chrX:152835166chr2:232030589ENST000003736352024511_545825960.3333333333334RepeatNote=PC 4
TgenePSMD1chrX:152835166chr2:232030589ENST000003736352024547_580825960.3333333333334RepeatNote=PC 5
TgenePSMD1chrX:152835166chr2:232030589ENST000003736352024581_616825960.3333333333334RepeatNote=PC 6
TgenePSMD1chrX:152835166chr2:232030589ENST000003736352024617_649825960.3333333333334RepeatNote=PC 7
TgenePSMD1chrX:152835166chr2:232030589ENST000003736352024651_685825960.3333333333334RepeatNote=PC 8
TgenePSMD1chrX:152835166chr2:232030589ENST000003736352024686_726825960.3333333333334RepeatNote=PC 9
TgenePSMD1chrX:152835166chr2:232030589ENST000003736352024729_761825960.3333333333334RepeatNote=PC 10
TgenePSMD1chrX:152835166chr2:232030589ENST000004096432023403_436825923.0RepeatNote=PC 1
TgenePSMD1chrX:152835166chr2:232030589ENST000004096432023441_474825923.0RepeatNote=PC 2
TgenePSMD1chrX:152835166chr2:232030589ENST000004096432023476_510825923.0RepeatNote=PC 3
TgenePSMD1chrX:152835166chr2:232030589ENST000004096432023511_545825923.0RepeatNote=PC 4
TgenePSMD1chrX:152835166chr2:232030589ENST000004096432023547_580825923.0RepeatNote=PC 5
TgenePSMD1chrX:152835166chr2:232030589ENST000004096432023581_616825923.0RepeatNote=PC 6
TgenePSMD1chrX:152835166chr2:232030589ENST000004096432023617_649825923.0RepeatNote=PC 7
TgenePSMD1chrX:152835166chr2:232030589ENST000004096432023651_685825923.0RepeatNote=PC 8
TgenePSMD1chrX:152835166chr2:232030589ENST000004096432023686_726825923.0RepeatNote=PC 9
TgenePSMD1chrX:152835166chr2:232030589ENST000004096432023729_761825923.0RepeatNote=PC 10


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Fusion Gene Sequence for ATP2B3-PSMD1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>7865_7865_1_ATP2B3-PSMD1_ATP2B3_chrX_152835166_ENST00000393842_PSMD1_chr2_232030589_ENST00000308696_length(transcript)=4554nt_BP=3958nt
CAGCCAACAGTCGCTCTAAATGGGCCTTACTCTAACTGATGGATCCTGTCTGCCCTATAGCCTGTTGCATTCATGAAGACAGTGAGGGTT
AGCAGAGCACCCCGACCCCACCCTGTCCTCCAGGATGGAGACTCCACCTCCCAGGACTCCAAGTTCCTCCCCTGTGGGCCAGGCCCCCAT
TCACTCATTCCTCCAGGCCCCCGGCCACATGCGGGACTGACCACGCGGTAGACTTCCTGCCGACTCCATACCACGTGTCTCAAAGAGCTT
AGGGCCCAGTGTCCACGCTTAGCAGCTTTCTCACCGCCGCCAAACCTTGCCTGGGCACTGGGACCGTGGGTGGCCGCCTGTCCCTAGCTG
TGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCCACCCCAAGCCCC
AGCAGCAGCGGGATGTCCCCCAGGCTGGAGGCTTTGGGTGCACGCTGGCGGAGCTGCGCACCCTCATGGAGCTGCGAGGGGCCGAGGCGC
TGCAGAAGATCGAGGAGGCCTACGGGGATGTCAGCGGGCTCTGCCGGAGGCTGAAGACCTCACCCACAGAGGGCCTGGCGGACAACACCA
ATGACCTGGAGAAGCGCAGGCAGATCTACGGGCAGAACTTCATCCCCCCAAAGCAACCCAAGACCTTCCTGCAGCTGGTGTGGGAGGCCC
TGCAGGACGTGACCCTCATCATCCTGGAGGTGGCTGCCATCGTCTCTCTGGGCCTCTCGTTCTATGCGCCGCCAGGAGAGGAGAGTGAAG
CCTGTGGGAATGTGTCGGGAGGCGCAGAAGATGAGGGCGAGGCCGAAGCTGGCTGGATCGAGGGGGCTGCCATCCTGCTGTCCGTCATCT
GTGTGGTGCTGGTCACGGCCTTCAATGACTGGAGCAAGGAGAAGCAGTTCCGAGGCCTGCAGAGCCGAATTGAGCAGGAGCAGAAGTTCA
CGGTCATCCGGAACGGGCAGCTCCTCCAGGTCCCCGTGGCTGCGCTGGTGGTGGGGGACATTGCCCAGGTCAAGTACGGCGACCTGCTGC
CAGCCGACGGCGTGCTCATCCAGGCCAATGACCTCAAGATCGACGAGAGCTCCCTGACGGGCGAGTCTGACCACGTGCGCAAGTCAGCTG
ACAAAGATCCCATGCTGCTCTCAGGCACTCATGTCATGGAAGGTTCTGGAAGAATGGTGGTGACCGCCGTTGGCGTGAATTCCCAGACAG
GCATCATCTTCACGCTGCTTGGAGCTGGCGGAGAGGAGGAAGAGAAGAAAGATAAGAAAGCTAAGAAGCAGGATGGTGCAGTGGCCATGG
AGATGCAGCCCCTGAAGAGCGCGGAGGGTGGGGAGATGGAGGAGCGGGAGAAGAAGAAAGCCAACGCACCCAAAAAGGAGAAGTCTGTCC
TTCAGGGGAAGCTCACAAAGCTAGCCGTGCAGATCGGGAAAGCAGGGCTGGTGATGTCTGCCATCACCGTCATCATCCTGGTCCTCTACT
TTGTGATTGAGACGTTTGTCGTGGAAGGCCGGACATGGCTGGCAGAGTGCACGCCGGTCTATGTACAATACTTCGTGAAGTTCTTCATCA
TTGGTGTCACTGTGCTGGTCGTGGCTGTCCCAGAGGGCCTGCCTCTTGCTGTCACCATCTCCTTAGCTTACTCTGTCAAGAAAATGATGA
AAGACAACAACCTGGTGCGCCACCTGGATGCCTGCGAGACCATGGGCAACGCCACAGCCATCTGCTCCGACAAGACGGGCACGCTCACCA
CCAACCGTATGACCGTGGTCCAGTCCTACCTAGGAGACACCCACTACAAAGAGATTCCGGCCCCCAGCGCCCTGACCCCTAAGATCCTCG
ACCTCCTGGTCCATGCCATCTCCATCAACAGTGCCTATACCACCAAAATACTACCTCCTGAGAAGGAAGGCGCCCTCCCACGCCAGGTGG
GCAATAAGACGGAGTGCGCCCTGCTGGGCTTCGTCTTGGACCTGAAGCGGGACTTCCAGCCCGTGCGCGAGCAGATCCCGGAAGACAAGC
TTTACAAAGTGTACACCTTCAACTCGGTCCGCAAGTCCATGAGCACAGTCATCCGCATGCCCGACGGTGGCTTCCGCCTCTTCAGCAAGG
GGGCCTCAGAGATCCTCTTGAAAAAGTGCACCAACATCTTGAACAGCAATGGCGAACTCCGGGGCTTTCGGCCTCGGGACCGGGACGACA
TGGTGAGGAAGATCATCGAGCCGATGGCTTGCGATGGCCTCCGCACCATCTGCATCGCCTACCGGGACTTCTCTGCAGGCCAGGAGCCCG
ACTGGGACAACGAGAATGAGGTCGTGGGTGACCTCACCTGCATAGCTGTCGTGGGCATTGAGGACCCTGTGCGGCCCGAGGTCCCTGAAG
CTATCCGAAAATGCCAGCGTGCTGGCATCACAGTCCGCATGGTGACTGGGGACAACATCAACACGGCCCGGGCCATCGCAGCCAAATGCG
GCATCATCCAGCCCGGGGAGGACTTCCTGTGCCTAGAAGGGAAGGAGTTCAACCGGCGGATCCGCAATGAGAAAGGCGAGATAGAACAGG
AGCGGCTGGACAAGGTGTGGCCCAAGCTGAGGGTGCTGGCCCGGTCGTCTCCCACCGACAAGCACACACTGGTCAAAGGGATTATCGACA
GCACCACTGGTGAGCAGCGGCAGGTGGTGGCTGTGACAGGGGATGGCACCAACGATGGGCCGGCCCTCAAGAAGGCGGACGTGGGCTTCG
CCATGGGCATCGCAGGGACCGACGTGGCCAAGGAGGCCTCCGACATCATCCTGACCGATGACAACTTCACCAGCATCGTCAAGGCAGTCA
TGTGGGGCCGTAACGTCTATGACAGCATCTCCAAGTTCCTGCAGTTTCAACTGACGGTCAATGTGGTGGCTGTGATCGTGGCCTTCACAG
GTGCCTGCATTACTCAGGACTCTCCTCTCAAAGCCGTGCAGATGTTGTGGGTGAACTTGATCATGGACACATTTGCCTCTCTGGCCCTGG
CGACGGAGCCACCCACAGAGTCGCTGCTGCTGCGGAAGCCGTACGGCCGCGACAAGCCCCTCATCTCCCGCACCATGATGAAGAACATTC
TGGGCCACGCCGTGTACCAGCTCGCCATCATCTTCACCCTGCTGTTTGTCGGGGAGCTCTTCTTCGACATCGACAGCGGGAGGAATGCGC
CCCTGCACTCGCCACCCTCAGAGCACTACACCATCATCTTCAACACGTTCGTCATGATGCAGCTCTTTAACGAGATCAACGCCCGCAAGA
TCCACGGCGAGAGGAACGTGTTCGACGGCATCTTCAGCAACCCCATCTTCTGCACCATCGTTTTGGGCACTTTCGGGATTCAGATTGTCA
TCGTCCAGTTTGGCGGGAAGCCCTTCAGCTGCTCCCCACTATCCACAGAACAGTGGCTCTGGTGCCTGTTTGTTGGTGTTGGGGAGCTGG
TCTGGGGACAGGTCATTGCCACCATCCCCACCAGCCAGCTCAAGTGCCTGAAGGAAGCCGGGCACGGGCCCGGGAAGGACGAGATGACCG
ACGAGGAGCTGGCCGAAGGCGAGGAAGAGATCGACCATGCCGAGCGGGAGCTCCGCAGGGGCCAGATCCTCTGGTTCCGGGGCCTGAACC
GGATTCAGACGCAGCTACTCACGCAATTCTCTCTGCTGCCAATCCTACCAGTGCTGCTGGGAGTGAGTCTTGACTTCCCTTTTCTCTCAT
AAATGGCATCTCTGGGGAAGAATAAGCCTCCCCAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTC
TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAACGTATTCAACCCATGGCAGA
TGAGGCAGAGAAAAAGGAGGAAAAAGAGAAGAAAAAAGAACCTGAGCCAAACTTCCAGTTATTGGATAACCCAGCCCGAGTTATGCCTGC
CCAGCTTAAGGTCCTAACCATGCCGGAGACCTGTAGATACCAGCCTTTCAAACCACTCTCTATTGGAGGCATCATCATTCTGAAGGATAC
CAGTGAAGACATTGAGGAGCTGGTGGAACCTGTGGCAGCACATGGCCCAAAAATCGAGGAGGAGGAACAAGAGCCAGAACCCCCAGAACC
ATTTGAGTATATTGATGATTAAGGGCCAGAGGATCTCACTTGCTTATCTGAAGAAGATTGTCCAGGCTCATATTGGGAATGCTTATGAGG
AAATTCATGCCGAGACCTGCTATTCAATGCATGTATCGTTGCCTCTGCACTGACCTGAAGAACCCTGTCTCCAAGTCTTTGGTTGAAGAG
AAGATATATGACTGTTGAGTGTGCTCTTTCACAGAACTTGGTTTTCAAATAAATATAAGATCTCCAGATGGACAAGACATTTGTTTTTCA

>7865_7865_1_ATP2B3-PSMD1_ATP2B3_chrX_152835166_ENST00000393842_PSMD1_chr2_232030589_ENST00000308696_length(amino acids)=1129AA_BP=
MTGSMGDMANSSIEFHPKPQQQRDVPQAGGFGCTLAELRTLMELRGAEALQKIEEAYGDVSGLCRRLKTSPTEGLADNTNDLEKRRQIYG
QNFIPPKQPKTFLQLVWEALQDVTLIILEVAAIVSLGLSFYAPPGEESEACGNVSGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFNDW
SKEKQFRGLQSRIEQEQKFTVIRNGQLLQVPVAALVVGDIAQVKYGDLLPADGVLIQANDLKIDESSLTGESDHVRKSADKDPMLLSGTH
VMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKAKKQDGAVAMEMQPLKSAEGGEMEEREKKKANAPKKEKSVLQGKLTKLAVQ
IGKAGLVMSAITVIILVLYFVIETFVVEGRTWLAECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDA
CETMGNATAICSDKTGTLTTNRMTVVQSYLGDTHYKEIPAPSALTPKILDLLVHAISINSAYTTKILPPEKEGALPRQVGNKTECALLGF
VLDLKRDFQPVREQIPEDKLYKVYTFNSVRKSMSTVIRMPDGGFRLFSKGASEILLKKCTNILNSNGELRGFRPRDRDDMVRKIIEPMAC
DGLRTICIAYRDFSAGQEPDWDNENEVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGEDFLC
LEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAK
EASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLL
RKPYGRDKPLISRTMMKNILGHAVYQLAIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGI
FSNPIFCTIVLGTFGIQIVIVQFGGKPFSCSPLSTEQWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGEEEI

--------------------------------------------------------------
>7865_7865_2_ATP2B3-PSMD1_ATP2B3_chrX_152835166_ENST00000393842_PSMD1_chr2_232030589_ENST00000373635_length(transcript)=4551nt_BP=3958nt
CAGCCAACAGTCGCTCTAAATGGGCCTTACTCTAACTGATGGATCCTGTCTGCCCTATAGCCTGTTGCATTCATGAAGACAGTGAGGGTT
AGCAGAGCACCCCGACCCCACCCTGTCCTCCAGGATGGAGACTCCACCTCCCAGGACTCCAAGTTCCTCCCCTGTGGGCCAGGCCCCCAT
TCACTCATTCCTCCAGGCCCCCGGCCACATGCGGGACTGACCACGCGGTAGACTTCCTGCCGACTCCATACCACGTGTCTCAAAGAGCTT
AGGGCCCAGTGTCCACGCTTAGCAGCTTTCTCACCGCCGCCAAACCTTGCCTGGGCACTGGGACCGTGGGTGGCCGCCTGTCCCTAGCTG
TGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCCACCCCAAGCCCC
AGCAGCAGCGGGATGTCCCCCAGGCTGGAGGCTTTGGGTGCACGCTGGCGGAGCTGCGCACCCTCATGGAGCTGCGAGGGGCCGAGGCGC
TGCAGAAGATCGAGGAGGCCTACGGGGATGTCAGCGGGCTCTGCCGGAGGCTGAAGACCTCACCCACAGAGGGCCTGGCGGACAACACCA
ATGACCTGGAGAAGCGCAGGCAGATCTACGGGCAGAACTTCATCCCCCCAAAGCAACCCAAGACCTTCCTGCAGCTGGTGTGGGAGGCCC
TGCAGGACGTGACCCTCATCATCCTGGAGGTGGCTGCCATCGTCTCTCTGGGCCTCTCGTTCTATGCGCCGCCAGGAGAGGAGAGTGAAG
CCTGTGGGAATGTGTCGGGAGGCGCAGAAGATGAGGGCGAGGCCGAAGCTGGCTGGATCGAGGGGGCTGCCATCCTGCTGTCCGTCATCT
GTGTGGTGCTGGTCACGGCCTTCAATGACTGGAGCAAGGAGAAGCAGTTCCGAGGCCTGCAGAGCCGAATTGAGCAGGAGCAGAAGTTCA
CGGTCATCCGGAACGGGCAGCTCCTCCAGGTCCCCGTGGCTGCGCTGGTGGTGGGGGACATTGCCCAGGTCAAGTACGGCGACCTGCTGC
CAGCCGACGGCGTGCTCATCCAGGCCAATGACCTCAAGATCGACGAGAGCTCCCTGACGGGCGAGTCTGACCACGTGCGCAAGTCAGCTG
ACAAAGATCCCATGCTGCTCTCAGGCACTCATGTCATGGAAGGTTCTGGAAGAATGGTGGTGACCGCCGTTGGCGTGAATTCCCAGACAG
GCATCATCTTCACGCTGCTTGGAGCTGGCGGAGAGGAGGAAGAGAAGAAAGATAAGAAAGCTAAGAAGCAGGATGGTGCAGTGGCCATGG
AGATGCAGCCCCTGAAGAGCGCGGAGGGTGGGGAGATGGAGGAGCGGGAGAAGAAGAAAGCCAACGCACCCAAAAAGGAGAAGTCTGTCC
TTCAGGGGAAGCTCACAAAGCTAGCCGTGCAGATCGGGAAAGCAGGGCTGGTGATGTCTGCCATCACCGTCATCATCCTGGTCCTCTACT
TTGTGATTGAGACGTTTGTCGTGGAAGGCCGGACATGGCTGGCAGAGTGCACGCCGGTCTATGTACAATACTTCGTGAAGTTCTTCATCA
TTGGTGTCACTGTGCTGGTCGTGGCTGTCCCAGAGGGCCTGCCTCTTGCTGTCACCATCTCCTTAGCTTACTCTGTCAAGAAAATGATGA
AAGACAACAACCTGGTGCGCCACCTGGATGCCTGCGAGACCATGGGCAACGCCACAGCCATCTGCTCCGACAAGACGGGCACGCTCACCA
CCAACCGTATGACCGTGGTCCAGTCCTACCTAGGAGACACCCACTACAAAGAGATTCCGGCCCCCAGCGCCCTGACCCCTAAGATCCTCG
ACCTCCTGGTCCATGCCATCTCCATCAACAGTGCCTATACCACCAAAATACTACCTCCTGAGAAGGAAGGCGCCCTCCCACGCCAGGTGG
GCAATAAGACGGAGTGCGCCCTGCTGGGCTTCGTCTTGGACCTGAAGCGGGACTTCCAGCCCGTGCGCGAGCAGATCCCGGAAGACAAGC
TTTACAAAGTGTACACCTTCAACTCGGTCCGCAAGTCCATGAGCACAGTCATCCGCATGCCCGACGGTGGCTTCCGCCTCTTCAGCAAGG
GGGCCTCAGAGATCCTCTTGAAAAAGTGCACCAACATCTTGAACAGCAATGGCGAACTCCGGGGCTTTCGGCCTCGGGACCGGGACGACA
TGGTGAGGAAGATCATCGAGCCGATGGCTTGCGATGGCCTCCGCACCATCTGCATCGCCTACCGGGACTTCTCTGCAGGCCAGGAGCCCG
ACTGGGACAACGAGAATGAGGTCGTGGGTGACCTCACCTGCATAGCTGTCGTGGGCATTGAGGACCCTGTGCGGCCCGAGGTCCCTGAAG
CTATCCGAAAATGCCAGCGTGCTGGCATCACAGTCCGCATGGTGACTGGGGACAACATCAACACGGCCCGGGCCATCGCAGCCAAATGCG
GCATCATCCAGCCCGGGGAGGACTTCCTGTGCCTAGAAGGGAAGGAGTTCAACCGGCGGATCCGCAATGAGAAAGGCGAGATAGAACAGG
AGCGGCTGGACAAGGTGTGGCCCAAGCTGAGGGTGCTGGCCCGGTCGTCTCCCACCGACAAGCACACACTGGTCAAAGGGATTATCGACA
GCACCACTGGTGAGCAGCGGCAGGTGGTGGCTGTGACAGGGGATGGCACCAACGATGGGCCGGCCCTCAAGAAGGCGGACGTGGGCTTCG
CCATGGGCATCGCAGGGACCGACGTGGCCAAGGAGGCCTCCGACATCATCCTGACCGATGACAACTTCACCAGCATCGTCAAGGCAGTCA
TGTGGGGCCGTAACGTCTATGACAGCATCTCCAAGTTCCTGCAGTTTCAACTGACGGTCAATGTGGTGGCTGTGATCGTGGCCTTCACAG
GTGCCTGCATTACTCAGGACTCTCCTCTCAAAGCCGTGCAGATGTTGTGGGTGAACTTGATCATGGACACATTTGCCTCTCTGGCCCTGG
CGACGGAGCCACCCACAGAGTCGCTGCTGCTGCGGAAGCCGTACGGCCGCGACAAGCCCCTCATCTCCCGCACCATGATGAAGAACATTC
TGGGCCACGCCGTGTACCAGCTCGCCATCATCTTCACCCTGCTGTTTGTCGGGGAGCTCTTCTTCGACATCGACAGCGGGAGGAATGCGC
CCCTGCACTCGCCACCCTCAGAGCACTACACCATCATCTTCAACACGTTCGTCATGATGCAGCTCTTTAACGAGATCAACGCCCGCAAGA
TCCACGGCGAGAGGAACGTGTTCGACGGCATCTTCAGCAACCCCATCTTCTGCACCATCGTTTTGGGCACTTTCGGGATTCAGATTGTCA
TCGTCCAGTTTGGCGGGAAGCCCTTCAGCTGCTCCCCACTATCCACAGAACAGTGGCTCTGGTGCCTGTTTGTTGGTGTTGGGGAGCTGG
TCTGGGGACAGGTCATTGCCACCATCCCCACCAGCCAGCTCAAGTGCCTGAAGGAAGCCGGGCACGGGCCCGGGAAGGACGAGATGACCG
ACGAGGAGCTGGCCGAAGGCGAGGAAGAGATCGACCATGCCGAGCGGGAGCTCCGCAGGGGCCAGATCCTCTGGTTCCGGGGCCTGAACC
GGATTCAGACGCAGCTACTCACGCAATTCTCTCTGCTGCCAATCCTACCAGTGCTGCTGGGAGTGAGTCTTGACTTCCCTTTTCTCTCAT
AAATGGCATCTCTGGGGAAGAATAAGCCTCCCCAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTC
TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAACGTATTCAACCCATGGCAGA
TGAGGCAGAGAAAAAGGAGGAAAAAGAGAAGAAAAAAGAACCTGAGCCAAACTTCCAGTTATTGGATAACCCAGCCCGAGTTATGCCTGC
CCAGCTTAAGGTCCTAACCATGCCGGAGACCTGTAGATACCAGCCTTTCAAACCACTCTCTATTGGAGGCATCATCATTCTGAAGGATAC
CAGTGAAGACATTGAGGAGCTGGTGGAACCTGTGGCAGCACATGGCCCAAAAATCGAGGAGGAGGAACAAGAGCCAGAACCCCCAGAACC
ATTTGAGTATATTGATGATTAAGGGCCAGAGGATCTCACTTGCTTATCTGAAGAAGATTGTCCAGGCTCATATTGGGAATGCTTATGAGG
AAATTCATGCCGAGACCTGCTATTCAATGCATGTATCGTTGCCTCTGCACTGACCTGAAGAACCCTGTCTCCAAGTCTTTGGTTGAAGAG
AAGATATATGACTGTTGAGTGTGCTCTTTCACAGAACTTGGTTTTCAAATAAATATAAGATCTCCAGATGGACAAGACATTTGTTTTTCA

>7865_7865_2_ATP2B3-PSMD1_ATP2B3_chrX_152835166_ENST00000393842_PSMD1_chr2_232030589_ENST00000373635_length(amino acids)=1129AA_BP=
MTGSMGDMANSSIEFHPKPQQQRDVPQAGGFGCTLAELRTLMELRGAEALQKIEEAYGDVSGLCRRLKTSPTEGLADNTNDLEKRRQIYG
QNFIPPKQPKTFLQLVWEALQDVTLIILEVAAIVSLGLSFYAPPGEESEACGNVSGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFNDW
SKEKQFRGLQSRIEQEQKFTVIRNGQLLQVPVAALVVGDIAQVKYGDLLPADGVLIQANDLKIDESSLTGESDHVRKSADKDPMLLSGTH
VMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKAKKQDGAVAMEMQPLKSAEGGEMEEREKKKANAPKKEKSVLQGKLTKLAVQ
IGKAGLVMSAITVIILVLYFVIETFVVEGRTWLAECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDA
CETMGNATAICSDKTGTLTTNRMTVVQSYLGDTHYKEIPAPSALTPKILDLLVHAISINSAYTTKILPPEKEGALPRQVGNKTECALLGF
VLDLKRDFQPVREQIPEDKLYKVYTFNSVRKSMSTVIRMPDGGFRLFSKGASEILLKKCTNILNSNGELRGFRPRDRDDMVRKIIEPMAC
DGLRTICIAYRDFSAGQEPDWDNENEVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGEDFLC
LEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAK
EASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLL
RKPYGRDKPLISRTMMKNILGHAVYQLAIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGI
FSNPIFCTIVLGTFGIQIVIVQFGGKPFSCSPLSTEQWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGEEEI

--------------------------------------------------------------
>7865_7865_3_ATP2B3-PSMD1_ATP2B3_chrX_152835166_ENST00000393842_PSMD1_chr2_232030589_ENST00000409643_length(transcript)=4252nt_BP=3958nt
CAGCCAACAGTCGCTCTAAATGGGCCTTACTCTAACTGATGGATCCTGTCTGCCCTATAGCCTGTTGCATTCATGAAGACAGTGAGGGTT
AGCAGAGCACCCCGACCCCACCCTGTCCTCCAGGATGGAGACTCCACCTCCCAGGACTCCAAGTTCCTCCCCTGTGGGCCAGGCCCCCAT
TCACTCATTCCTCCAGGCCCCCGGCCACATGCGGGACTGACCACGCGGTAGACTTCCTGCCGACTCCATACCACGTGTCTCAAAGAGCTT
AGGGCCCAGTGTCCACGCTTAGCAGCTTTCTCACCGCCGCCAAACCTTGCCTGGGCACTGGGACCGTGGGTGGCCGCCTGTCCCTAGCTG
TGGCTGAGCCAAGATTGCACTTGTGAGAAGGCCTGACAGGCAGCATGGGCGACATGGCCAATAGTTCCATCGAGTTCCACCCCAAGCCCC
AGCAGCAGCGGGATGTCCCCCAGGCTGGAGGCTTTGGGTGCACGCTGGCGGAGCTGCGCACCCTCATGGAGCTGCGAGGGGCCGAGGCGC
TGCAGAAGATCGAGGAGGCCTACGGGGATGTCAGCGGGCTCTGCCGGAGGCTGAAGACCTCACCCACAGAGGGCCTGGCGGACAACACCA
ATGACCTGGAGAAGCGCAGGCAGATCTACGGGCAGAACTTCATCCCCCCAAAGCAACCCAAGACCTTCCTGCAGCTGGTGTGGGAGGCCC
TGCAGGACGTGACCCTCATCATCCTGGAGGTGGCTGCCATCGTCTCTCTGGGCCTCTCGTTCTATGCGCCGCCAGGAGAGGAGAGTGAAG
CCTGTGGGAATGTGTCGGGAGGCGCAGAAGATGAGGGCGAGGCCGAAGCTGGCTGGATCGAGGGGGCTGCCATCCTGCTGTCCGTCATCT
GTGTGGTGCTGGTCACGGCCTTCAATGACTGGAGCAAGGAGAAGCAGTTCCGAGGCCTGCAGAGCCGAATTGAGCAGGAGCAGAAGTTCA
CGGTCATCCGGAACGGGCAGCTCCTCCAGGTCCCCGTGGCTGCGCTGGTGGTGGGGGACATTGCCCAGGTCAAGTACGGCGACCTGCTGC
CAGCCGACGGCGTGCTCATCCAGGCCAATGACCTCAAGATCGACGAGAGCTCCCTGACGGGCGAGTCTGACCACGTGCGCAAGTCAGCTG
ACAAAGATCCCATGCTGCTCTCAGGCACTCATGTCATGGAAGGTTCTGGAAGAATGGTGGTGACCGCCGTTGGCGTGAATTCCCAGACAG
GCATCATCTTCACGCTGCTTGGAGCTGGCGGAGAGGAGGAAGAGAAGAAAGATAAGAAAGCTAAGAAGCAGGATGGTGCAGTGGCCATGG
AGATGCAGCCCCTGAAGAGCGCGGAGGGTGGGGAGATGGAGGAGCGGGAGAAGAAGAAAGCCAACGCACCCAAAAAGGAGAAGTCTGTCC
TTCAGGGGAAGCTCACAAAGCTAGCCGTGCAGATCGGGAAAGCAGGGCTGGTGATGTCTGCCATCACCGTCATCATCCTGGTCCTCTACT
TTGTGATTGAGACGTTTGTCGTGGAAGGCCGGACATGGCTGGCAGAGTGCACGCCGGTCTATGTACAATACTTCGTGAAGTTCTTCATCA
TTGGTGTCACTGTGCTGGTCGTGGCTGTCCCAGAGGGCCTGCCTCTTGCTGTCACCATCTCCTTAGCTTACTCTGTCAAGAAAATGATGA
AAGACAACAACCTGGTGCGCCACCTGGATGCCTGCGAGACCATGGGCAACGCCACAGCCATCTGCTCCGACAAGACGGGCACGCTCACCA
CCAACCGTATGACCGTGGTCCAGTCCTACCTAGGAGACACCCACTACAAAGAGATTCCGGCCCCCAGCGCCCTGACCCCTAAGATCCTCG
ACCTCCTGGTCCATGCCATCTCCATCAACAGTGCCTATACCACCAAAATACTACCTCCTGAGAAGGAAGGCGCCCTCCCACGCCAGGTGG
GCAATAAGACGGAGTGCGCCCTGCTGGGCTTCGTCTTGGACCTGAAGCGGGACTTCCAGCCCGTGCGCGAGCAGATCCCGGAAGACAAGC
TTTACAAAGTGTACACCTTCAACTCGGTCCGCAAGTCCATGAGCACAGTCATCCGCATGCCCGACGGTGGCTTCCGCCTCTTCAGCAAGG
GGGCCTCAGAGATCCTCTTGAAAAAGTGCACCAACATCTTGAACAGCAATGGCGAACTCCGGGGCTTTCGGCCTCGGGACCGGGACGACA
TGGTGAGGAAGATCATCGAGCCGATGGCTTGCGATGGCCTCCGCACCATCTGCATCGCCTACCGGGACTTCTCTGCAGGCCAGGAGCCCG
ACTGGGACAACGAGAATGAGGTCGTGGGTGACCTCACCTGCATAGCTGTCGTGGGCATTGAGGACCCTGTGCGGCCCGAGGTCCCTGAAG
CTATCCGAAAATGCCAGCGTGCTGGCATCACAGTCCGCATGGTGACTGGGGACAACATCAACACGGCCCGGGCCATCGCAGCCAAATGCG
GCATCATCCAGCCCGGGGAGGACTTCCTGTGCCTAGAAGGGAAGGAGTTCAACCGGCGGATCCGCAATGAGAAAGGCGAGATAGAACAGG
AGCGGCTGGACAAGGTGTGGCCCAAGCTGAGGGTGCTGGCCCGGTCGTCTCCCACCGACAAGCACACACTGGTCAAAGGGATTATCGACA
GCACCACTGGTGAGCAGCGGCAGGTGGTGGCTGTGACAGGGGATGGCACCAACGATGGGCCGGCCCTCAAGAAGGCGGACGTGGGCTTCG
CCATGGGCATCGCAGGGACCGACGTGGCCAAGGAGGCCTCCGACATCATCCTGACCGATGACAACTTCACCAGCATCGTCAAGGCAGTCA
TGTGGGGCCGTAACGTCTATGACAGCATCTCCAAGTTCCTGCAGTTTCAACTGACGGTCAATGTGGTGGCTGTGATCGTGGCCTTCACAG
GTGCCTGCATTACTCAGGACTCTCCTCTCAAAGCCGTGCAGATGTTGTGGGTGAACTTGATCATGGACACATTTGCCTCTCTGGCCCTGG
CGACGGAGCCACCCACAGAGTCGCTGCTGCTGCGGAAGCCGTACGGCCGCGACAAGCCCCTCATCTCCCGCACCATGATGAAGAACATTC
TGGGCCACGCCGTGTACCAGCTCGCCATCATCTTCACCCTGCTGTTTGTCGGGGAGCTCTTCTTCGACATCGACAGCGGGAGGAATGCGC
CCCTGCACTCGCCACCCTCAGAGCACTACACCATCATCTTCAACACGTTCGTCATGATGCAGCTCTTTAACGAGATCAACGCCCGCAAGA
TCCACGGCGAGAGGAACGTGTTCGACGGCATCTTCAGCAACCCCATCTTCTGCACCATCGTTTTGGGCACTTTCGGGATTCAGATTGTCA
TCGTCCAGTTTGGCGGGAAGCCCTTCAGCTGCTCCCCACTATCCACAGAACAGTGGCTCTGGTGCCTGTTTGTTGGTGTTGGGGAGCTGG
TCTGGGGACAGGTCATTGCCACCATCCCCACCAGCCAGCTCAAGTGCCTGAAGGAAGCCGGGCACGGGCCCGGGAAGGACGAGATGACCG
ACGAGGAGCTGGCCGAAGGCGAGGAAGAGATCGACCATGCCGAGCGGGAGCTCCGCAGGGGCCAGATCCTCTGGTTCCGGGGCCTGAACC
GGATTCAGACGCAGCTACTCACGCAATTCTCTCTGCTGCCAATCCTACCAGTGCTGCTGGGAGTGAGTCTTGACTTCCCTTTTCTCTCAT
AAATGGCATCTCTGGGGAAGAATAAGCCTCCCCAGCTCGGCCTTCTCTCTTTTGCAGTCTTGCATTCCGCTCACCGTGGCTTTTCTGTTC
TTTCTTTACCGCCCTGTCCAGTCCTTCCCGCCCAGACGGTGTCTCTCGAAAGCCATATTCTTTTATGAAACGTATTCAACCCATGGCAGA
TGAGGCAGAGAAAAAGGAGGAAAAAGAGAAGAAAAAAGAACCTGAGCCAAACTTCCAGTTATTGGATAACCCAGCCCGAGTTATGCCTGC
CCAGCTTAAGGTCCTAACCATGCCGGAGACCTGTAGATACCAGCCTTTCAAACCACTCTCTATTGGAGGCATCATCATTCTGAAGGATAC
CAGTGAAGACATTGAGGAGCTGGTGGAACCTGTGGCAGCACATGGCCCAAAAATCGAGGAGGAGGAACAAGAGCCAGAACCCCCAGAACC

>7865_7865_3_ATP2B3-PSMD1_ATP2B3_chrX_152835166_ENST00000393842_PSMD1_chr2_232030589_ENST00000409643_length(amino acids)=1129AA_BP=
MTGSMGDMANSSIEFHPKPQQQRDVPQAGGFGCTLAELRTLMELRGAEALQKIEEAYGDVSGLCRRLKTSPTEGLADNTNDLEKRRQIYG
QNFIPPKQPKTFLQLVWEALQDVTLIILEVAAIVSLGLSFYAPPGEESEACGNVSGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFNDW
SKEKQFRGLQSRIEQEQKFTVIRNGQLLQVPVAALVVGDIAQVKYGDLLPADGVLIQANDLKIDESSLTGESDHVRKSADKDPMLLSGTH
VMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKAKKQDGAVAMEMQPLKSAEGGEMEEREKKKANAPKKEKSVLQGKLTKLAVQ
IGKAGLVMSAITVIILVLYFVIETFVVEGRTWLAECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDA
CETMGNATAICSDKTGTLTTNRMTVVQSYLGDTHYKEIPAPSALTPKILDLLVHAISINSAYTTKILPPEKEGALPRQVGNKTECALLGF
VLDLKRDFQPVREQIPEDKLYKVYTFNSVRKSMSTVIRMPDGGFRLFSKGASEILLKKCTNILNSNGELRGFRPRDRDDMVRKIIEPMAC
DGLRTICIAYRDFSAGQEPDWDNENEVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGEDFLC
LEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAK
EASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLL
RKPYGRDKPLISRTMMKNILGHAVYQLAIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGI
FSNPIFCTIVLGTFGIQIVIVQFGGKPFSCSPLSTEQWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGEEEI

--------------------------------------------------------------

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Fusion Gene PPI Analysis for ATP2B3-PSMD1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for ATP2B3-PSMD1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for ATP2B3-PSMD1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneATP2B3C0001430Adenoma1CTD_human
HgeneATP2B3C0020428Hyperaldosteronism1CTD_human
HgeneATP2B3C0020538Hypertensive disease1CTD_human
HgeneATP2B3C0205646Adenoma, Basal Cell1CTD_human
HgeneATP2B3C0205647Follicular adenoma1CTD_human
HgeneATP2B3C0205648Adenoma, Microcystic1CTD_human
HgeneATP2B3C0205649Adenoma, Monomorphic1CTD_human
HgeneATP2B3C0205650Papillary adenoma1CTD_human
HgeneATP2B3C0205651Adenoma, Trabecular1CTD_human
HgeneATP2B3C0796205SPINOCEREBELLAR ATAXIA, X-LINKED 11CTD_human;GENOMICS_ENGLAND;UNIPROT
HgeneATP2B3C1384514Conn Syndrome1CTD_human