![]() |
||||||
|
![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:C6orf203-PDSS2 (FusionGDB2 ID:HG51250TG57107) |
Fusion Gene Summary for C6orf203-PDSS2 |
![]() |
Fusion gene information | Fusion gene name: C6orf203-PDSS2 | Fusion gene ID: hg51250tg57107 | Hgene | Tgene | Gene symbol | C6orf203 | PDSS2 | Gene ID | 51250 | 57107 |
Gene name | mitochondrial transcription rescue factor 1 | decaprenyl diphosphate synthase subunit 2 | |
Synonyms | C6orf203|HSPC230|PRED31 | C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 | |
Cytomap | ('C6orf203')('PDSS2') 6q21 | 6q21 | |
Type of gene | protein-coding | protein-coding | |
Description | mitochondrial transcription rescue factor 1uncharacterized protein C6orf203 | decaprenyl-diphosphate synthase subunit 2all-trans-decaprenyl-diphosphate synthase subunit 2decaprenyl pyrophosphate synthase subunit 2decaprenyl pyrophosphate synthetase subunit 2prenyl (decaprenyl) diphosphate synthase, subunit 2subunit 2 of decapr | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000489790, ENST00000311381, ENST00000405204, ENST00000443043, | ||
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 9 X 7 X 6=378 |
# samples | 2 | 10 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(10/378*10)=-1.91838623444635 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: C6orf203 [Title/Abstract] AND PDSS2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | C6orf203(107361434)-PDSS2(107475981), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. | C6orf203-PDSS2 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. C6orf203-PDSS2 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. C6orf203-PDSS2 seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
![]() |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | PDSS2 | GO:0006744 | ubiquinone biosynthetic process | 16262699 |
Tgene | PDSS2 | GO:0008299 | isoprenoid biosynthetic process | 16262699 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
![]() |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
![]() |
![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BLCA | TCGA-FD-A43P-01A | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
ChimerDB4 | BLCA | TCGA-FD-A43P-01A | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
ChimerDB4 | BLCA | TCGA-FD-A43P | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
Top |
Fusion Gene ORF analysis for C6orf203-PDSS2 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000489790 | ENST00000369037 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
3UTR-3CDS | ENST00000489790 | ENST00000453874 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
3UTR-intron | ENST00000489790 | ENST00000369031 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
5CDS-intron | ENST00000311381 | ENST00000369031 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
5CDS-intron | ENST00000405204 | ENST00000369031 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
5CDS-intron | ENST00000443043 | ENST00000369031 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
5UTR-3CDS | ENST00000311381 | ENST00000369037 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
5UTR-3CDS | ENST00000311381 | ENST00000453874 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
5UTR-3CDS | ENST00000405204 | ENST00000369037 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
5UTR-3CDS | ENST00000405204 | ENST00000453874 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
5UTR-3CDS | ENST00000443043 | ENST00000369037 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
5UTR-3CDS | ENST00000443043 | ENST00000453874 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
5UTR-intron | ENST00000311381 | ENST00000369031 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
5UTR-intron | ENST00000405204 | ENST00000369031 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
5UTR-intron | ENST00000443043 | ENST00000369031 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
Frame-shift | ENST00000311381 | ENST00000453874 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
Frame-shift | ENST00000405204 | ENST00000453874 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
Frame-shift | ENST00000443043 | ENST00000453874 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
In-frame | ENST00000311381 | ENST00000369037 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
In-frame | ENST00000405204 | ENST00000369037 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
In-frame | ENST00000443043 | ENST00000369037 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - |
intron-3CDS | ENST00000489790 | ENST00000369037 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
intron-3CDS | ENST00000489790 | ENST00000453874 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
intron-intron | ENST00000489790 | ENST00000369031 | C6orf203 | chr6 | 107349475 | + | PDSS2 | chr6 | 107475981 | - |
![]() |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000405204 | C6orf203 | chr6 | 107361434 | + | ENST00000369037 | PDSS2 | chr6 | 107475981 | - | 3298 | 1077 | 529 | 1110 | 193 |
ENST00000443043 | C6orf203 | chr6 | 107361434 | + | ENST00000369037 | PDSS2 | chr6 | 107475981 | - | 3381 | 1160 | 675 | 1193 | 172 |
ENST00000311381 | C6orf203 | chr6 | 107361434 | + | ENST00000369037 | PDSS2 | chr6 | 107475981 | - | 2762 | 541 | 11 | 574 | 187 |
![]() |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000405204 | ENST00000369037 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - | 0.002484534 | 0.99751544 |
ENST00000443043 | ENST00000369037 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - | 0.003044684 | 0.9969553 |
ENST00000311381 | ENST00000369037 | C6orf203 | chr6 | 107361434 | + | PDSS2 | chr6 | 107475981 | - | 0.003983702 | 0.9960163 |
Top |
Fusion Genomic Features for C6orf203-PDSS2 |
![]() |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
![]() |
![]() |
Top |
Fusion Protein Features for C6orf203-PDSS2 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr6:107361434/chr6:107475981) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
![]() |
![]() |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Top |
Fusion Gene Sequence for C6orf203-PDSS2 |
![]() |
>11946_11946_1_C6orf203-PDSS2_C6orf203_chr6_107361434_ENST00000311381_PDSS2_chr6_107475981_ENST00000369037_length(transcript)=2762nt_BP=541nt AGCCTGGAGGCCTGCAGTCCGCGCGGCCGCGGGGAGGGACGAGAGGGCCTGACGTACAGATTATAAGCGCCATGGCTATGGCTAGTGTTA AATTGCTTGCCGGTGTTTTAAGAAAGCCAGATGCCTGGATTGGACTCTGGGGTGTTCTCCGAGGGACACCTTCATCATACAAACTCTGTA CTTCCTGGAATCGATACTTGTATTTTTCTAGTACCAAGTTACGTGCACCAAATTATAAAACACTTTTTTATAATATTTTCTCACTGAGAC TCCCAGGGCTTTTACTATCTCCAGAATGTATTTTTCCTTTTTCCGTAAGACTCAAAAGTAATATAAGGTCTACAAAATCTACTAAAAAGT CTCTGCAAAAAGTAGATGAAGAGGACTCTGATGAAGAAAGCCATCATGATGAGATGAGTGAGCAGGAAGAGGAGCTTGAGGATGATCCTA CTGTAGTCAAAAACTATAAAGACCTGGAAAAAGCAGTTCAGTCTTTTCGGTATGATGTTGTCCTGAAGACGGGGCTAGATATTGGGAGAA ATTGCGAGAAAGAATCAAAGCTGGCAAAGGTGTGACTTCAGCTATTGACCTGTGTCGTTACCATGGAAACAAGGCACTGGAGGCCCTGGA GAGCTTTCCTCCCTCGGAGGCCAGATCTGCTTTAGAAAACATTGTGTTTGCTGTGACCAGATTTTCATGACATCAAATTAAAAAGACACT ATTGTTAGTTAGCTGAAAATCCTAGGGAATGAGGTTGATTGGGAGCGCTTTCACGATGCGTTAATGACTTTTAAAACATATGCATTTTTC CTTCCTTTTATCACATTGCTAAATGAGTTCTGCTTTCTTTTTGGAACTGCTACAAACAAAATTAGAAGAAAAAAAGGTCAAGCAGTTTTC ACTTGTCACGCCAGAAGCACACTTGAGGCTGCAGTCGCAGAAATAATTAATGAGATTCGCTCCTGTGACCTCAGCAAATGGACAGGAAAT AAGTCCTTATTGATTGGACCGAGCCAGGGATGGCGCCAGGGCGGTGGCCTGTGGTTTTTCCTGCTAGAGAGGACAAAGCAAGTTGGAAGC TGCAGGTGTCAAGAGAAATGCTCTCAATACCAACCAGGGAGGATTGTCTAATCAAAAACTAGTGACCAATTTGTCATAATGGAGAGTAGT TCAATGGATTGAGAAAAATATGTTTTATTTGTTGGCTTGTAATTATGTCTCTGGATTATTATTATTTTTTTTTTAGATGTAGTTTTGCTC TTGTTGCCCAGGCTGGAGTGCAATGGTGCAGTTTTGACTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCC CGAGTAGCTGGAATTACAGGCACCTGCCACCACGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGTCAGGCTA GTCTCGAACTCCTGACCTCAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTAGAGGCTTGAGCCACTGCACCTGGCCTCATG TCTCTGGATTTATAATGCAGTATGAATATACTTTGTGCTTTATGGTTTTTATAATGTCTTTTTGGAGAAATTGCCGAAAAGTTGCCAAAT ACTTGAAGTAGGAGATTAAAATGTTATCAAATGTTAAATTGGTTATATTAGGAATAGTCTGTTTTTCTTTCCTGAAGATCAGTTTTTTTA TTCAAACACATTTCAAAGAACCAAATTTTTTTTTTCTTTAAGGAAAAAGGAGCTTTTTTTCAAGTGAAATGTATTCATTTGTAATACTTT GGTTTAAGGCATACTTTAATTTTTACGAGTTTCAGAAACAGAATTTTTGTACTAGGGAATTCATTGGTGAGAGTGTTCTTTTAACCTCAG AATGTCAAATTTTGGTCTTGAACCACAGACATCCAATTACAGAAAGAATATAAGCAATCTCACAGGCCTGCAATCGGACACTGTCTCTGT GTGGTTCATAGGAGATGATTTTTGAGGTTTGCACTCATGCAATTTGAGAACACCGTTGACAAGAAGGCTGAGTTTACATAAATGATCTAG ATTGAAACTCAGCTACCTTTCTTCCTCATGTGGTGTAATTACAGCCCTATCTGGAGACAGCGAATACAGCAAACAGATTTTATTACCTAG TTCGCTCAAACACTACATGAAGTTATTTTAGTTAAAGCCCTCCCCCAAAAGTTATAAAACCATTTTATCAGGGCCCAACATGTGGCATGC AATGAAGAGAAAATGTAAAGCTACAGAGGTTAATGTATTGTATTATAAAATATTTTAAGTGTACTCAAAATATCATAATTGTACAGTTTA TGCCACCATAATTTGAGGCCTATAGATTTAGCTTAAGAGAACACTGTTCTGTTTGAAATGCTTTCTGTCACTGAAATTGGCTTAATTAGT AACCATGGATAAGATGCTTTAGATCAGACTAGGTTTTAATCATTAACTTCCACAAAGAAGTCATACTTTGCGTTAGGTGTGCTGGTTGGA TGTGCAGGAACTTCAGCAAGCAGTAGGTTTTACTAAGCAGATGGTCGGGCACTGCAGGGCACCAGGCAGGATCCTAGGGCGCCTCTTATT CTGCGTTAGCATCTGGTTTGCTGTATGACCTTGCACAAGTCACTTCCTTCTGAGCCTCAATTTTCTCATCTGTACAATGAGATTCAAAAG >11946_11946_1_C6orf203-PDSS2_C6orf203_chr6_107361434_ENST00000311381_PDSS2_chr6_107475981_ENST00000369037_length(amino acids)=187AA_BP= MQSARPRGGTRGPDVQIISAMAMASVKLLAGVLRKPDAWIGLWGVLRGTPSSYKLCTSWNRYLYFSSTKLRAPNYKTLFYNIFSLRLPGL LLSPECIFPFSVRLKSNIRSTKSTKKSLQKVDEEDSDEESHHDEMSEQEEELEDDPTVVKNYKDLEKAVQSFRYDVVLKTGLDIGRNCEK -------------------------------------------------------------- >11946_11946_2_C6orf203-PDSS2_C6orf203_chr6_107361434_ENST00000405204_PDSS2_chr6_107475981_ENST00000369037_length(transcript)=3298nt_BP=1077nt AGATAGGGGTAGCCTGGAGGCCTGCAGTCCGCGCGGCCGCGGGGAGGGACGAGAGGGCCTGACGTACAGGTGAGTGCGCCTCTGCTGGCG CGCCGCGCCGGGCCCCCTGCCCGCGCCCCCTGTCACTTCGCCTCTCCGCCCCGCCCACGCTCCCGCCGGGTCTCCCCGTGAGTGTCCCGT GTCCTGCCAGCCTCGGGACGCCCCGCGAGCTCAGGGCTGCGCAGGGACTGTGGTAATTGAGCGCGGCGAAGCCTTCCGTTCCTGCCTCCT GTCGCTCCTGCTGGCTCCGAATGCAGACTGCGAACCCGGGGACGCAGTTGTCCATTTCCTTTGACCTTGGGGACCCAGGAAGGTGCACTG CCCGCGGGGGTGGGGAGGGAGCGAGAGGAATCCGACCCTGTCTCAGCCCACAGCCTCCGAGGTCTCCAAGTAAAGGGAAGGATCTTTAGC TGCATTAGACTTCAAAGCGTTTAGACCAGTTTCTCCATCTTACGGAGCGGTGAACGGGCTCAGGAATGTGGAGCGTTTCCTGGCGTCAAG CAGGTCAAAGTCAGCGCTGCTTTTTTTACAGACACTGCTTTTCTTACAGTCTTCGATTATAAGCGCCATGGCTATGGCTAGTGTTAAATT GCTTGCCGGTGTTTTAAGAAAGCCAGATGCCTGGATTGGACTCTGGGGTGTTCTCCGAGGGACACCTTCATCATACAAACTCTGTACTTC CTGGAATCGATACTTGTATTTTTCTAGTACCAAGTTACGTGCACCAAATTATAAAACACTTTTTTATAATATTTTCTCACTGAGACTCCC AGGGCTTTTACTATCTCCAGAATGTATTTTTCCTTTTTCCGTAAGACTCAAAAGTAATATAAGGTCTACAAAATCTACTAAAAAGTCTCT GCAAAAAGTAGATGAAGAGGACTCTGATGAAGAAAGCCATCATGATGAGATGAGTGAGCAGGAAGAGGAGCTTGAGGATGATCCTACTGT AGTCAAAAACTATAAAGACCTGGAAAAAGCAGTTCAGTCTTTTCGGTATGATGTTGTCCTGAAGACGGGGCTAGATATTGGGAGAAATTG CGAGAAAGAATCAAAGCTGGCAAAGGTGTGACTTCAGCTATTGACCTGTGTCGTTACCATGGAAACAAGGCACTGGAGGCCCTGGAGAGC TTTCCTCCCTCGGAGGCCAGATCTGCTTTAGAAAACATTGTGTTTGCTGTGACCAGATTTTCATGACATCAAATTAAAAAGACACTATTG TTAGTTAGCTGAAAATCCTAGGGAATGAGGTTGATTGGGAGCGCTTTCACGATGCGTTAATGACTTTTAAAACATATGCATTTTTCCTTC CTTTTATCACATTGCTAAATGAGTTCTGCTTTCTTTTTGGAACTGCTACAAACAAAATTAGAAGAAAAAAAGGTCAAGCAGTTTTCACTT GTCACGCCAGAAGCACACTTGAGGCTGCAGTCGCAGAAATAATTAATGAGATTCGCTCCTGTGACCTCAGCAAATGGACAGGAAATAAGT CCTTATTGATTGGACCGAGCCAGGGATGGCGCCAGGGCGGTGGCCTGTGGTTTTTCCTGCTAGAGAGGACAAAGCAAGTTGGAAGCTGCA GGTGTCAAGAGAAATGCTCTCAATACCAACCAGGGAGGATTGTCTAATCAAAAACTAGTGACCAATTTGTCATAATGGAGAGTAGTTCAA TGGATTGAGAAAAATATGTTTTATTTGTTGGCTTGTAATTATGTCTCTGGATTATTATTATTTTTTTTTTAGATGTAGTTTTGCTCTTGT TGCCCAGGCTGGAGTGCAATGGTGCAGTTTTGACTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAG TAGCTGGAATTACAGGCACCTGCCACCACGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGTCAGGCTAGTCT CGAACTCCTGACCTCAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTAGAGGCTTGAGCCACTGCACCTGGCCTCATGTCTC TGGATTTATAATGCAGTATGAATATACTTTGTGCTTTATGGTTTTTATAATGTCTTTTTGGAGAAATTGCCGAAAAGTTGCCAAATACTT GAAGTAGGAGATTAAAATGTTATCAAATGTTAAATTGGTTATATTAGGAATAGTCTGTTTTTCTTTCCTGAAGATCAGTTTTTTTATTCA AACACATTTCAAAGAACCAAATTTTTTTTTTCTTTAAGGAAAAAGGAGCTTTTTTTCAAGTGAAATGTATTCATTTGTAATACTTTGGTT TAAGGCATACTTTAATTTTTACGAGTTTCAGAAACAGAATTTTTGTACTAGGGAATTCATTGGTGAGAGTGTTCTTTTAACCTCAGAATG TCAAATTTTGGTCTTGAACCACAGACATCCAATTACAGAAAGAATATAAGCAATCTCACAGGCCTGCAATCGGACACTGTCTCTGTGTGG TTCATAGGAGATGATTTTTGAGGTTTGCACTCATGCAATTTGAGAACACCGTTGACAAGAAGGCTGAGTTTACATAAATGATCTAGATTG AAACTCAGCTACCTTTCTTCCTCATGTGGTGTAATTACAGCCCTATCTGGAGACAGCGAATACAGCAAACAGATTTTATTACCTAGTTCG CTCAAACACTACATGAAGTTATTTTAGTTAAAGCCCTCCCCCAAAAGTTATAAAACCATTTTATCAGGGCCCAACATGTGGCATGCAATG AAGAGAAAATGTAAAGCTACAGAGGTTAATGTATTGTATTATAAAATATTTTAAGTGTACTCAAAATATCATAATTGTACAGTTTATGCC ACCATAATTTGAGGCCTATAGATTTAGCTTAAGAGAACACTGTTCTGTTTGAAATGCTTTCTGTCACTGAAATTGGCTTAATTAGTAACC ATGGATAAGATGCTTTAGATCAGACTAGGTTTTAATCATTAACTTCCACAAAGAAGTCATACTTTGCGTTAGGTGTGCTGGTTGGATGTG CAGGAACTTCAGCAAGCAGTAGGTTTTACTAAGCAGATGGTCGGGCACTGCAGGGCACCAGGCAGGATCCTAGGGCGCCTCTTATTCTGC GTTAGCATCTGGTTTGCTGTATGACCTTGCACAAGTCACTTCCTTCTGAGCCTCAATTTTCTCATCTGTACAATGAGATTCAAAAGTTGA >11946_11946_2_C6orf203-PDSS2_C6orf203_chr6_107361434_ENST00000405204_PDSS2_chr6_107475981_ENST00000369037_length(amino acids)=193AA_BP= MASSRSKSALLFLQTLLFLQSSIISAMAMASVKLLAGVLRKPDAWIGLWGVLRGTPSSYKLCTSWNRYLYFSSTKLRAPNYKTLFYNIFS LRLPGLLLSPECIFPFSVRLKSNIRSTKSTKKSLQKVDEEDSDEESHHDEMSEQEEELEDDPTVVKNYKDLEKAVQSFRYDVVLKTGLDI -------------------------------------------------------------- >11946_11946_3_C6orf203-PDSS2_C6orf203_chr6_107361434_ENST00000443043_PDSS2_chr6_107475981_ENST00000369037_length(transcript)=3381nt_BP=1160nt AGATAGGGGTAGCCTGGAGGCCTGCAGTCCGCGCGGCCGCGGGGAGGGACGAGAGGGCCTGACGTACAGGTGAGTGCGCCTCTGCTGGCG CGCCGCGCCGGGCCCCCTGCCCGCGCCCCCTGTCACTTCGCCTCTCCGCCCCGCCCACGCTCCCGCCGGGTCTCCCCGTGAGTGTCCCGT GTCCTGCCAGCCTCGGGACGCCCCGCGAGCTCAGGGCTGCGCAGGGACTGTGGTAATTGAGCGCGGCGAAGCCTTCCGTTCCTGCCTCCT GTCGCTCCTGCTGGCTCCGAATGCAGACTGCGAACCCGGGGACGCAGTTGTCCATTTCCTTTGACCTTGGGGACCCAGGAAGGTGCACTG CCCGCGGGGGTGGGGAGGGAGCGAGAGGAATCCGACCCTGTCTCAGCCCACAGCCTCCGAGGTCTCCAAGTAAAGGGAAGGATCTTTAGC TGCATTAGACTTCAAAGCGTTTAGACCAGTTTCTCCATCTTACGGAGCGGTGAACGGGCTCAGGAATGTGGAGCGTTTCCTGGCGTCAAG CAGGTCAAAGTCAGCGCTGCTTTTTTTACAGACACTGCTTTTCTTACAGTCTTCGACTATAAACTCTACAAGAATAGGAATCTTCGTATT TTTTTCCTCTGCTGAATTCCTAGTGCCCAGATTAGTGCTTGGCACATGATTATAAGCGCCATGGCTATGGCTAGTGTTAAATTGCTTGCC GGTGTTTTAAGAAAGCCAGATGCCTGGATTGGACTCTGGGGTGTTCTCCGAGGGACACCTTCATCATACAAACTCTGTACTTCCTGGAAT CGATACTTGTATTTTTCTAGTACCAAGTTACGTGCACCAAATTATAAAACACTTTTTTATAATATTTTCTCACTGAGACTCCCAGGGCTT TTACTATCTCCAGAATGTATTTTTCCTTTTTCCGTAAGACTCAAAAGTAATATAAGGTCTACAAAATCTACTAAAAAGTCTCTGCAAAAA GTAGATGAAGAGGACTCTGATGAAGAAAGCCATCATGATGAGATGAGTGAGCAGGAAGAGGAGCTTGAGGATGATCCTACTGTAGTCAAA AACTATAAAGACCTGGAAAAAGCAGTTCAGTCTTTTCGGTATGATGTTGTCCTGAAGACGGGGCTAGATATTGGGAGAAATTGCGAGAAA GAATCAAAGCTGGCAAAGGTGTGACTTCAGCTATTGACCTGTGTCGTTACCATGGAAACAAGGCACTGGAGGCCCTGGAGAGCTTTCCTC CCTCGGAGGCCAGATCTGCTTTAGAAAACATTGTGTTTGCTGTGACCAGATTTTCATGACATCAAATTAAAAAGACACTATTGTTAGTTA GCTGAAAATCCTAGGGAATGAGGTTGATTGGGAGCGCTTTCACGATGCGTTAATGACTTTTAAAACATATGCATTTTTCCTTCCTTTTAT CACATTGCTAAATGAGTTCTGCTTTCTTTTTGGAACTGCTACAAACAAAATTAGAAGAAAAAAAGGTCAAGCAGTTTTCACTTGTCACGC CAGAAGCACACTTGAGGCTGCAGTCGCAGAAATAATTAATGAGATTCGCTCCTGTGACCTCAGCAAATGGACAGGAAATAAGTCCTTATT GATTGGACCGAGCCAGGGATGGCGCCAGGGCGGTGGCCTGTGGTTTTTCCTGCTAGAGAGGACAAAGCAAGTTGGAAGCTGCAGGTGTCA AGAGAAATGCTCTCAATACCAACCAGGGAGGATTGTCTAATCAAAAACTAGTGACCAATTTGTCATAATGGAGAGTAGTTCAATGGATTG AGAAAAATATGTTTTATTTGTTGGCTTGTAATTATGTCTCTGGATTATTATTATTTTTTTTTTAGATGTAGTTTTGCTCTTGTTGCCCAG GCTGGAGTGCAATGGTGCAGTTTTGACTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGG AATTACAGGCACCTGCCACCACGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGTCAGGCTAGTCTCGAACTC CTGACCTCAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTAGAGGCTTGAGCCACTGCACCTGGCCTCATGTCTCTGGATTT ATAATGCAGTATGAATATACTTTGTGCTTTATGGTTTTTATAATGTCTTTTTGGAGAAATTGCCGAAAAGTTGCCAAATACTTGAAGTAG GAGATTAAAATGTTATCAAATGTTAAATTGGTTATATTAGGAATAGTCTGTTTTTCTTTCCTGAAGATCAGTTTTTTTATTCAAACACAT TTCAAAGAACCAAATTTTTTTTTTCTTTAAGGAAAAAGGAGCTTTTTTTCAAGTGAAATGTATTCATTTGTAATACTTTGGTTTAAGGCA TACTTTAATTTTTACGAGTTTCAGAAACAGAATTTTTGTACTAGGGAATTCATTGGTGAGAGTGTTCTTTTAACCTCAGAATGTCAAATT TTGGTCTTGAACCACAGACATCCAATTACAGAAAGAATATAAGCAATCTCACAGGCCTGCAATCGGACACTGTCTCTGTGTGGTTCATAG GAGATGATTTTTGAGGTTTGCACTCATGCAATTTGAGAACACCGTTGACAAGAAGGCTGAGTTTACATAAATGATCTAGATTGAAACTCA GCTACCTTTCTTCCTCATGTGGTGTAATTACAGCCCTATCTGGAGACAGCGAATACAGCAAACAGATTTTATTACCTAGTTCGCTCAAAC ACTACATGAAGTTATTTTAGTTAAAGCCCTCCCCCAAAAGTTATAAAACCATTTTATCAGGGCCCAACATGTGGCATGCAATGAAGAGAA AATGTAAAGCTACAGAGGTTAATGTATTGTATTATAAAATATTTTAAGTGTACTCAAAATATCATAATTGTACAGTTTATGCCACCATAA TTTGAGGCCTATAGATTTAGCTTAAGAGAACACTGTTCTGTTTGAAATGCTTTCTGTCACTGAAATTGGCTTAATTAGTAACCATGGATA AGATGCTTTAGATCAGACTAGGTTTTAATCATTAACTTCCACAAAGAAGTCATACTTTGCGTTAGGTGTGCTGGTTGGATGTGCAGGAAC TTCAGCAAGCAGTAGGTTTTACTAAGCAGATGGTCGGGCACTGCAGGGCACCAGGCAGGATCCTAGGGCGCCTCTTATTCTGCGTTAGCA TCTGGTTTGCTGTATGACCTTGCACAAGTCACTTCCTTCTGAGCCTCAATTTTCTCATCTGTACAATGAGATTCAAAAGTTGACCTGAAA >11946_11946_3_C6orf203-PDSS2_C6orf203_chr6_107361434_ENST00000443043_PDSS2_chr6_107475981_ENST00000369037_length(amino acids)=172AA_BP= MIISAMAMASVKLLAGVLRKPDAWIGLWGVLRGTPSSYKLCTSWNRYLYFSSTKLRAPNYKTLFYNIFSLRLPGLLLSPECIFPFSVRLK -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for C6orf203-PDSS2 |
![]() |
![]() |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for C6orf203-PDSS2 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for C6orf203-PDSS2 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | C3553358 | COENZYME Q10 DEFICIENCY, PRIMARY, 3 | 3 | CTD_human;GENOMICS_ENGLAND;UNIPROT | |
Tgene | C0023264 | Leigh Disease | 1 | GENOMICS_ENGLAND |