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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:ATP5I-CBX5 (FusionGDB2 ID:HG521TG23468) |
Fusion Gene Summary for ATP5I-CBX5 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: ATP5I-CBX5 | Fusion gene ID: hg521tg23468 | Hgene | Tgene | Gene symbol | ATP5I | CBX5 | Gene ID | 521 | 23468 |
| Gene name | ATP synthase membrane subunit e | chromobox 5 | |
| Synonyms | ATP5I|ATP5K | HEL25|HP1|HP1A | |
| Cytomap | ('ATP5I')('CBX5') 4p16.3 | 12q13.13 | |
| Type of gene | protein-coding | protein-coding | |
| Description | ATP synthase subunit e, mitochondrialATP synthase e chain, mitochondrialATP synthase, H+ transporting, mitochondrial F0 complex, subunit EATP synthase, H+ transporting, mitochondrial Fo complex subunit EATPase subunit eF1F0-ATP synthase, murine e sub | chromobox protein homolog 5HP1 alpha homologHP1-ALPHAHP1Hs alphaantigen p25chromobox homolog 5 (HP1 alpha homolog, Drosophila)epididymis luminal protein 25heterochromatin protein 1 homolog alphaheterochromatin protein 1-alpha | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | . | . | |
| Ensembl transtripts involved in fusion gene | ENST00000506525, ENST00000304312, | ||
| Fusion gene scores | * DoF score | 9 X 9 X 4=324 | 9 X 9 X 4=324 |
| # samples | 12 | 9 | |
| ** MAII score | log2(12/324*10)=-1.43295940727611 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(9/324*10)=-1.84799690655495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: ATP5I [Title/Abstract] AND CBX5 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | ATP5I(667092)-CBX5(54635689), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | ATP5I-CBX5 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ATP5I-CBX5 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ATP5I-CBX5 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. ATP5I-CBX5 seems lost the major protein functional domain in Tgene partner, which is a epigenetic factor due to the frame-shifted ORF. ATP5I-CBX5 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. ATP5I-CBX5 seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | ATP5I | GO:0042776 | mitochondrial ATP synthesis coupled proton transport | 12110673 |
| Tgene | CBX5 | GO:0045892 | negative regulation of transcription, DNA-templated | 9636147 |
| Fusion gene breakpoints across ATP5I (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across CBX5 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene information * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | GBM | TCGA-27-2519-01A | ATP5I | chr4 | 667092 | - | CBX5 | chr12 | 54635689 | - |
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Fusion Gene ORF analysis for ATP5I-CBX5 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 5UTR-3CDS | ENST00000506525 | ENST00000209875 | ATP5I | chr4 | 667092 | - | CBX5 | chr12 | 54635689 | - |
| 5UTR-3CDS | ENST00000506525 | ENST00000439541 | ATP5I | chr4 | 667092 | - | CBX5 | chr12 | 54635689 | - |
| 5UTR-3CDS | ENST00000506525 | ENST00000550411 | ATP5I | chr4 | 667092 | - | CBX5 | chr12 | 54635689 | - |
| Frame-shift | ENST00000304312 | ENST00000439541 | ATP5I | chr4 | 667092 | - | CBX5 | chr12 | 54635689 | - |
| Frame-shift | ENST00000304312 | ENST00000550411 | ATP5I | chr4 | 667092 | - | CBX5 | chr12 | 54635689 | - |
| In-frame | ENST00000304312 | ENST00000209875 | ATP5I | chr4 | 667092 | - | CBX5 | chr12 | 54635689 | - |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000304312 | ATP5I | chr4 | 667092 | - | ENST00000209875 | CBX5 | chr12 | 54635689 | - | 11247 | 281 | 10446 | 10919 | 157 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000304312 | ENST00000209875 | ATP5I | chr4 | 667092 | - | CBX5 | chr12 | 54635689 | - | 0.5374655 | 0.46253452 |
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Fusion Genomic Features for ATP5I-CBX5 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
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Fusion Protein Features for ATP5I-CBX5 |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr4:667092/chr12:54635689) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | . |
| FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | CBX5 | chr4:667092 | chr12:54635689 | ENST00000209875 | 3 | 5 | 11_14 | 141 | 192.0 | Compositional bias | Note=Poly-Ser | |
| Tgene | CBX5 | chr4:667092 | chr12:54635689 | ENST00000439541 | 3 | 5 | 11_14 | 141 | 192.0 | Compositional bias | Note=Poly-Ser | |
| Tgene | CBX5 | chr4:667092 | chr12:54635689 | ENST00000550411 | 3 | 5 | 11_14 | 141 | 192.0 | Compositional bias | Note=Poly-Ser | |
| Tgene | CBX5 | chr4:667092 | chr12:54635689 | ENST00000209875 | 3 | 5 | 121_179 | 141 | 192.0 | Domain | Chromo 2%3B shadow subtype | |
| Tgene | CBX5 | chr4:667092 | chr12:54635689 | ENST00000209875 | 3 | 5 | 20_78 | 141 | 192.0 | Domain | Chromo 1 | |
| Tgene | CBX5 | chr4:667092 | chr12:54635689 | ENST00000439541 | 3 | 5 | 121_179 | 141 | 192.0 | Domain | Chromo 2%3B shadow subtype | |
| Tgene | CBX5 | chr4:667092 | chr12:54635689 | ENST00000439541 | 3 | 5 | 20_78 | 141 | 192.0 | Domain | Chromo 1 | |
| Tgene | CBX5 | chr4:667092 | chr12:54635689 | ENST00000550411 | 3 | 5 | 121_179 | 141 | 192.0 | Domain | Chromo 2%3B shadow subtype | |
| Tgene | CBX5 | chr4:667092 | chr12:54635689 | ENST00000550411 | 3 | 5 | 20_78 | 141 | 192.0 | Domain | Chromo 1 |
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Fusion Gene Sequence for ATP5I-CBX5 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >7995_7995_1_ATP5I-CBX5_ATP5I_chr4_667092_ENST00000304312_CBX5_chr12_54635689_ENST00000209875_length(transcript)=11247nt_BP=281nt AGCTCCGCCTTTGCCTCCAAGGCTTTGCTGGCTTGTGCGGCATCCTGCTCCGTCTGCAGGTTGTGCTTCCGGTGCGGAGGTCAGGGACAA GATGGTGCCACCGGTGCAGGTCTCTCCGCTCATCAAGCTCGGCCGCTACTCCGCCCTGTTCCTCGGTGTGGCCTACGGAGCCACGCGCTA CAATTACCTAAAACCTCGGGCAGAAGAGGAGAGGAGGATAGCAGCAGAAGAGAAGAAGAAGCAGGATGAACTGAAACGGATTGCCAGAGA ATTGGCAGAAGGAAAGACACAGATGAAGCTGACCTGGTTCTTGCAAAAGAAGCTAATGTGAAATGTCCACAAATTGTGATAGCATTTTAT GAAGAGAGACTGACATGGCATGCATATCCTGAGGATGCGGAAAACAAAGAGAAAGAAACAGCAAAGAGCTAAAGGAGGGGATGGTCTCTG TCATTTCTCTTTGTACATAATACATTCACCTCCCTGCCTCCTCTCCTTTCTACCCACCCCTTTCTATCCTAAACACATCCATAAAAAATG TGCTTATCACTGTGCTCCACAGGAGAAATGTTGGTATTGGTTCTCTTGTAACATAACTGATGGTCTGATTAATGATAAGTGTCTCTCTGT GAAGACCAGGCATTTACATACTGAGTGTAATACCCACAATTTTTTTTTCCTTTGCCCTGATCTCTTCCTTCTGCTTCCCTGTGACCTCAA GATGAGTTTCAACTTTTTAATCACCTTAGAGTCTTGATCTTTTCAGGGTTGGTCGCTTTTTAGGTTGGGGGATTTTGTTACAATGATGTT GAATTTTGGTTTCTTGCTTTGGTTCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAAAGGATGTTGCCCA TCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCCCAACCTTGTTCAGCTCTACCCAGGAGAATACAGGGTTTCTGGTGT GGTCTTCTGGGCCACCCTCTGTTGTTCATCCTCACTCATCCTCCCAGAATTACTCCATCCTTTGGAAGATTTGAAATTTTACACTGAAAT CTGTCAAGACACTCTTTTTAGCCCCAGGACTTTCGGTATTGCTTTTAGCACTCCCCACTTCTGCTTCTGTAAAGTGATATCAATTTGTGA TAAAATGACAAGATTATTAACTGTGCAGATTTGTAGCTATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATAT GGTATGTATGTATGATTTCTTTCCATTCCTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCTTGTGCCAA GGTGCTAGGCACCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGAGGCTTCAAACCTGACCCTCACTTCT CAGTGGACCCGAGTTTCCCTTCCATGCCATTATTTTCAGTGGGGAAGTTTTAGAGGTGAGCTGTTGGCCACAATATCAATTTTAAGTGTT CATAGCAGTTATGTCTCCTGCATTCTTGGCTCCTGGATTTACCACCAAGAGTCCCCAAAATATTAATGCTCTTCCCTTTTTCTACCCTCA AACTTATAGTTGTATCTTATTTTTTAAAATGAATTTTCATGGCCAGGCACAGTGGCTACCGCCTGTAATCCCAGCACTTTGGGAGGCTGA GGCAGGAGAATTGCTTGAAGCCAGAAGTTTGAGACCAGCCTGGGCAATGTAGTGAGACCCCCTGTCTCTAAAAAATATAAATAAAAATAA AGGCATGTTCCTGAAAGACTGTCACCTTGGAAAGTGACAGGCCCTGGCATTAGCATGTTGACACACCCTTTTCTTCTTACTCAGCAAAAT ACTTCGTTTTGGTTTCTTCTTGTGTTGCTATTGAGAAATTTGTCTGATCATATCCTTCTGCCTTTGTCCCCCAAGAAATGCCCTACTTTA TCCTTTTCTTTTTGTAGTTGAGGAGGGCTAGAGAATCACAATTAAAAGTAAGGAAATAGCAGGGTTTTGAGGATCCTTGTCCCAGCCCCA AAGCTGAGGAAATAAGAATAAATGCTTAATATAGCCTTAATTCTAGAGCGCACCAGCCATGAGGCTGCTTTTCTTGTTGTTTTTGATTTT TAAAACATACAGCTGTCTGGCCAGGAGCATCTACCATTTCTAGATTATTCAGAGTAATGAGGGGAATGGATGGATTGCTCCAGTCCACAG ATGAGCCACATAATATGCAAATCATATACCCATTCATAGCATTTGTTAACATTGCTTCCCTGCTCAGCTGCTGATTGAATTCTGTGTGCT TATATAAATTATGTCAAAAATTATACTGCATAATTGAGGTGACAGCTGTTGCTGCAGTGACATGACAGACTGGAACAATGAAGCTTTTGG TTTAAGTCAGCCAGGAAAATCCTTCTGAATGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTTTTATCTC TATATTCCTTCTCTCTCTGAAGGAATTAAAGGCCTAGATCAAGTGCTGGATAATTGACAATTGCTTGTACTTAATCTGATCGGTATCTAA AAGAAGGAAAGGATGGTCAGGAAACATTTATCATAAATGTAGCCAAGGATATCAATTAGGGTAGACAAGAATAGGACAAAAATAGGCCAG AGCTCCTGAGGAGGTGATATGGGTCTCTTGATTTGCAGAAAATGACAGCCTATCCAAGTGGCCCAGTGTATGCCTCCCAGTAGCAGTGGG CATGTAAACTGCAGCGACCTTATTTTTAAAACCAAAAACCTAGTATGTGGACAAAGAACATGACAATATTTGGTACTGAGATTGGTTCTG AGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAATATTTAAGACATTCATAAAAATCTGATATTCTTTTACCGAAATAACCCCAGT ATCATCTACTACTTACCATCTGTTAATAGACTTTACTCTGTCTTTTTTGTCTTCGGTTTATTGTACTGAGTGCCGCCAAAACAACTTTTG TTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAATGTAGGGAGCCAGAGGCCAGTATTGATTTCAGCCCTTAGCACAAAGGAAATCA GATGCCTGCTTCCAGCATTTGTTAGTGTTGAGTAGATGTTCTTGCCCTAGAAGAATTACAGCCTCAAACAGAAACCTGTTTCATGGAGCT TTCTCCCCTCAGAAGAGTTAATAGTTAAGAGCTAAGCACTCTTAAACACCTAAGTCTCAAATGCTAAAAATTTATTTTTCTTGTGTTTAG TCCTCTTTCAAGACATCTTTCTAAGCCTTTCAGTAATCAACATTAAAAGATCTCCCTTTCTTCAGAGTTATAGCACAGCTTTGCCCAGTA GAGGCTACCAAGGACAGCTTAGCAGCCCTTTGATTGCTGGGCTGGGCAGATGGCCTTCAAGTTAAGATCAAATGCCGGGAAAATCAGCCT ACATGGGAGCACCCATTTTAAACCTGGAGAGAACCATGATGTTTTCTTCTTCAAATAACAATCTAGTTTTTTTTCCCCCAGTACTAAAAT TGTATTGTCTTTCAGACAATATAATTTTTATTTAAAATTGGAACATACTATCTTCATGCTTTCTAAGCTAAATCTTCATTTAGATTTCAC TCCTCAGTAGATCCCAGAGAAGAAGCTATATAGGATCCAGATTCAAATTTAACAGTGTCTTCTACTTTTTTAGTTATGTTTTCTATCAAC TCCTGCTGCCTTTTCAAATACGGATATTTTTCAGGAGACTCTTCTACTTGTCCACTGACTGTATTTTTTCCTTTTTGATCCGTAGCCCTG GTTAAATGGCTGACATCCTTCCGTGGATGATTCTTGGAGGTAGTCTCAGAATTCCAAAGTGATTGTCTGTCTTCTTCTTGTCTTGATCCT AATGCAGACATTCACCTCTATTATTTATTTATTTTTTTTAGACAGAGTCTCGCTCTGTCACCAGGCTGGAGTGCAGTGGCACAATCTTGG CTTACTGTACCCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGTGTGTGCCACCATGCCC AGCTAATTTTTGTATTTTTGGTAGAGATGGGGTTTTACCATGTTTGCCAGGATGGTCTCGATTTCCTGACCTTGTGATCTGCCCACCTTG GCCTCCCAAAGTGCTGGAATTACAGGCATGAGCCACCGTGCCTGGCCACCTCTATTAAATTTTTGTGGACAAAAATAAAATTGTCATTAT TTGTTTGCTCTCATGGAGCACTTTCAGTAATACAATTTTTTTTAAATTCCAGTTGCCCTCTTTGTTGCTCTGTCCTCTGTAATACCTGAC TTTGCTAAAGACTTGAGGGGTGGTTTCAGAGGAGGGTCAGGTGATGGGAAGGCAGGATGAGAAAAGCCCTGGACTTGCATGTTTGAGAAG GCTTCCAACCACATCTTCACTCAGACTCTTGGAATTCCTGTCCCCAAAACAAGCTTCTGTTTTTTGCTCACAATGCTATATTTCTAAATT TTTCCTGAATTACTGAGAAGCAGTCATTAGCTTTGTTAAGTTTGGTTTGGGGACATTGTTGGTATCAAAAATCGAAGTCTTATTCATTTG ATGTAGGCCATGAATCATCAATAACTGGTTGCTGGAAAGCTTGACTACCATCCACTGGGGTGCTATTTTGAGAAGGATTTTTGGGTATCT TTATAGTCTGCAATTAGTTGATGATTGCTTTCTAGTTTATCAACTGCATTTATATTTGCTTTTCTGTTCATGGAAAATCCTTTATTTGCT GGGGTTTTTTGTTTGTTTGTTTGTTTTTCCCACTTACAGCAAGTAAAAGTGGTCTGAGGTTATCCTTGTTTTTCTTCGCGGTTTGCCATG TGTGAAAGTAGATTTCCTGCTATTGATATATTCTCATTATAGACAGAATAGTGGAGAACAGTGTTGCCATGGACAAAATCCAGTTTTGGT CCACTCTGGGGAGCATTTGGACCTGTGGTGCTTCTAACAATTAAAAGTCTAGATGGTCCTTGACTGTCCCCCAGCCATACTGCATACTAC TTTGTGCATTCTACTTTGTGTCATTAATGAAAGATTGGTTCTGTCCCTGTAACTTAGGCATTTATTATTCTTAACTCTTCATTCCTGTTC TGTAGCCACCCAGCAGTCCATTTTCCCTATGTTCAGGCCAAACCACAGGGCATTGGGGAAGGTTTTTGGGATTTTCTTATTGAGATTTTG TTGAATCTGTAGTTTACCCCAGCTTTCCTAAGGTACAGTGAGGGGTTGGAGGGATCTGTGTTTGGCCCGGGGAGCAATTGTCTCTACCTT AAGGTTCAGTTTTGAGGGCATAAAATACTACTTTGCAATGTCATGAGAACACCGTTAGATCTGAAATGTGGAAATGGTTTCTCACAATTT AAAGGAAAAACCCACTTTGCACCCATGATCCCATCATTTTGGTTGAGATTTTAGAATAAAAAATATAGTGTTGAGATCCGTACTTTTGTA ATCAGACCACCAAGCATGCCTGTGGCAAGGCAGAGAGGAAAGGTCTGGAGCCAGTGTATTGCAGTTTCATGCTACCTTTACCTGCTAATC ATAAAAATTATGTTTTCAAAAGTAGATGATACTAGCCTTACACCCAAAAACATGTTCTGAATTAGATGCCCCCTCACCCAATTTTTATTA AGCTTTCTAAATTCCAGCCACATTGCTGTACATCAACATTGGTTTCATTCAACAGACATTTTTTTGGCCTGAAGATACAAGGTTCAGAAA GAGGCCATCCCTGCCCTCAAATAACTTTCATACTGGTGTATGATGAACTGACCATTAATAGTTTAAGTGCTTACAAGCTATGTTTCTGTT CAAAAAAAAAATAGTTTGGTATAATAAATGCTATAAACCAATACACATTTCTGACTTGGGGGCAGAGACAGACTGGCTGATGTTGTATAG TTTGTAGCCCTGGAGTAAGAAGTTGACATTAATTTCGGCCTATATGTGGAAAAGACCTATAACATTGGGTGAACTGAGCCAGCTGGCCAT AGAACACAAGAACATATTCCAGGAAATAAATATAGCTGGAGGGTTGGAAATGCTGTTATTACTGAGAGAGAAAACAGGTGAGTTGGGATT GAGAACTCCTGATTTTCATCCCTGGTTTAGATTCTTGGCCAAAGTAGTGGTAGAGTTAATCTTTGCTTGTGGAAAGCATTAACTATGTTG CAGATTCAGTTGTGTTACATTATTGTGGGTTCTATAACAACATATTCCTCATGGACACTTTACCAGAGTTGCTCACACCTTTTTCAATTT CTCATCCCTTTTGGAGGAATGAACATGAGACTTAACTGCCTTTAAGCCTAAAACGGACATGCTTTCCAATGACAAGAGATTTTCTAAAGA GAAGTCTTGGAGCACATCTGTTAATACCTGAGCATCTACTCTGAGCAGTGCAGTTTTATTCAATACTGGAGAGAGGGTGATTTCTTTTTT TTTGAGACGGAGTCTTGCTCTGTCTCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCA TTCTCCTGCCTCAGCCTCCCGAGGAGCTGGGACTACAGGCGCCGGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGT TTCACCTTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCCACCCACCTCGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGC CACCGCCGGGCCGAGAGGGTGATTTCTAAGCAGAGAATTGTATCAGTTATGTGGAAACCTTTGCCAGAAATACATATACCTTGTATATTA AATCTGAGTCTCAGATTTAATCATCGAAGCGTAGCTGGGTTAAGAAACAGTCTGATCGTAAGGATGTTGTCGATTCTGACCCATGGATGA CCACAAGAAAAAGATATTTATTTCTGCCTGGATAATTGAGAGTTGACTAACTTTGGAAGTCAGAATTCCCAGGAATTAGAGTAACTGCTC TGGAAAGTTAAAGTGTGAAGTTTTTTAGATAGTTTCATAAAAACAATTCTGGTTTCTTTTTGCTTGTGCTGACTTTCTTGGATTTTAATC TACCTCATCTTGTCTTTTTAGAGTTACTTCAACTTGTCACTTTAACATTGTGCTTGACTTTGGTTGTTTTCTAAGATGGAATTTTTCCTG TTCATTGACAGCTTGTTCTCTTGCCTTTTCATTCTGATCCTCATTTCATCTAACATCATCTCATATTGCTCCTCTGTCAAGAGAAATGTT TTAAAATAGTTTAAAGTCTTGTTTTATGGGAAGAAAGTGATCCTCCAATGCTATTTGTTTCTGAGGTCAGTAAGAGAAGGAGTTAAAACA AGGCAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAGCCATTAATTAAGACAATTTCAAAGTCAACTGAT TGTGATCATTAATGTCACAATAGATCAAAACCTAATTATCACAGCCTAGGTAAGAGCCATCAGTATTAATCGGAAAATCTAATAGGAAAC TATTATCAAGAAATTAGGCCAAATTGAATGCAGTGAACTTTTTATCTTGGCATTCTCTATTTTTTTGTGATGTCCCCTGGCATTGGCAGG TGTGACCCTAACAGTCGATTCAAGGCCAAGTGGTCAGTTTGTCAGCCTTTTTTAAGGGATTTCTTTTTATTTTTAGGAATTCCAAACAGA GTTAACCTAAACTGTCATTGCCAAAAGATCAGTCTTAAACTTTCTTAGCACCTGTACCTGTTTAATGTGATCAGCTATCAGTGAGGAAAA AAAAAAAAATCTATTTAGGTCTTGGAATGGTTCCTGTACCTAGAGTATCCATATTGAACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA GATGGAAACTTGCTCTTTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAGTTCTC TGCCTCAGCCTCCTGAGCAGCTGGGATTATAGGCGCCTGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTCACCAT CTTGGCCGTGCTGGTCTTGAACTCCTGACCTTGTGATCCGCCTGCCTCGGCCACTCAAAGTGCTGGGATTGCAGGCGTGAGCCAGCACCC GGCCACAGTATCTTTATTACAGCTCACTGCAGCCTCAATCTCCTGGGCTCAAATGATCCTCCTGCCTCAGCCTCCCAAGCAGCTGGGACT ACAGGCGCACACCACGGTGTCTGGCTAATTTTATTATTTAAAAAATGTTTTGTAGAGACAGTCTCCCTGTGTTGCCCAGGCTGGTCTCCA ACTCGTGAGCTCAAGTGATCCACGTGCCTCAGCCTCCCAAAGTGCTGGGATTACAAGCATAAGCCACCGCACCCGGCCCCTAGTGAACAT TTTACTGTATGTGTTGATAAATCATCTTTTGAGTTTCTGTTGTATGTGGGGACTTCCTACACTGGCTGCTGTGAAGAGGTATGGAAGAAA GGAGAGGCTTTCTGCCTAGAAATTCTTTGAGAACACCTGAAAAGACAGTTTAATCATGTCACAACACTCTTAAGGCTCAAGTCAGTGTTC TGGTTTCCGGTAGCTTTAGGATTGGATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCACCCCTCACCTCCT CAGTTTAGGATAAGAGACATAATGATTTCTACCAGAATCCAAAGTAAATCCAAAGGGGGAGAAAAGACATAACTGTTTTTTCTTCTACCT TTTTTTTGTTAAAGAGTTACATCTCTCACAGGAGGAAAGAATTCAAGAGTCTATATGATTAGTTACAGAGAATATTTTCATCCCCTCTCC CTGAATAGAAAAGCAGGGGTCACCATTTGTATCCTTACCCTTGAGGTGTTTTTGAAGATGCTGTAACTCTTGAAGTTGAGCTGAGGCAGA AAGGTTGGAAAAATGCAGCCCTCTGGGTATTGTGGGGAGGGATGTGATGTAGTAAGAGGGTGTTTTGTGGTGCTAGGATTCCCACGCCAC CAACTTGCAGCTTTATAAGAGCGCTACCAAGAACCACCACTGGGGAAAAGGTTCTTATTCATTGTTTCTGTTGGAATGTGATCTTGCTTT CTGGATTTTAGGAATTCAGGTTACTCAGTATAAAACTCTGAGAAATCAGTGTGACTTAGTCCTTCACCTCCTAAGATAAAGTGAATATTT CTTTACAAAATAATTCATGTCCTTAATGTTAAAGATGTAATTTTATTTTCAAAACATCTATAACATGACTTTCAGAAGCAGTTCATTTTT CCAAGATTCCTCACATTATACTAGATAAATAATAGGCCCTCAGTTAATACCCTTCAGTTATTGAATTAATCTAGTTTGTGGAATGAGGTG TATCCTGCCAACTTCCCTCTGCTCCCAAGTACACTCTGAGAGGTAAAATGCTCTGGGAAATGGAACAAGAATCGAGTGGATGCTGACTCT GTGTGCCCACCTCCTCAACTGATTGATAATGGTTGACCTTGGGCAAGTCACTTCTTTCAATGCCTCAGTTCCCCATCTGTCAAATGGGGT TAATAATACTGACCTACCTCACAGGGGTGTTGTTGTGAGGCATTGTAAATCAAAGTTAATAGAATACTTCAGGGTCCTCTGTGGAGGATG TCTTGAGCCAGAGTTTAAGCCTGACACACAGGCTTTGGTCCTCACTGAGCTGTCTCCAAGACTGGAACTACTTAGTGACTCGGCAAATTT TCTGCCCCCCACCCCTCATCAAAGCTGCTAGTTCAGATGTTGACAGTGTTTTCATGAATGTTGGAATCTTACTAGTCCAGACTTACTTAG GATGTTGTTGGGGAAGGCACTTGGGATTTTCTGTGTCTTGCATTCACAGAGGGAGGCCATTTCAGATTCAAGAGCATTGGATTAGGGAAT CGTGAGGCAGGGATGCTACTGCGTATTTCTCTCTGCAGGTTGGGGATTAAAGTTCCTTTCCCCATGGGTTTGAAGCAGACTCAGACTGTC TCAGGATCAAAGCAACCCTCAATGGTTTTGATTTATGTCATTGCTTACCACTCCCCAACCAATCCCAGGACAGCTGGGTCACTGTACCCC TTTGTGGTATCTGTACCTGGGCCTCTCCTTCCTCATAGGGACCAGCTGATTGAATAAATGTGACCACCTTATTTCCACCCCCCACCCCCA AAAGCTACATTGGAATTATTTTTCCTAGAAATGTGTATAACACTCAGAATTGGGCATTGATCCTTAAAGCTTCATCCCATTCACCGTATT CAACATCTGTCATCTCTTAGTGTCTGCAGTCTGAACCTAACCTTGACCTTTTTTCCCTCTGGTTTGAGAAAACTTTGGACACTATTTCTA CTTGGCCAGGTGTGGGCTCAAGAGCCTTACTCTTTCCATCTCAGTTTAGGGGCGCAGCCAGCTCCTCTTCCCAATAGGGCTCTTTCTGCT TTCCCTCTCCTTGGCCCTAGATTTGTAATCCATGAAAAAGCACAAGGTCCTGGCTCCTTGCGGTCACATTCTGGTTCTCTGTGTTTTGTG GACTCTGCTCTCACTGTTCACCCAGCACTAGCAGTACCAGATGGTTCTGTGGAGTCCTGGGGAATGGAGAGAGCACAGTCTGACTCCCTG CCAAGTAGCCAGGAGTTGACTTGCCCATGGTCCGCTGGCTTTCCCACCACTTCCTACAGGATGGGATCTAAGAGACTCAAGAGCTGGGTT TCTTTCAGCACTCTGTACTGTCCCAAATAGCAAACAAATCACTTTGTAGCCAGATTTCTGAATGGAAATGAGAAATTGAATTCTCCATGG ACTTTTAGGTTTATGGGGGAGTTTTAGCTGTGTTTCTTGGTTTTATTTCAGCCAAACATGTCTGCTTTTGATTTTTTTTTTAAAGTATAA GTGGTCTATATATATGTTCACCTTTTAAATGTAAATGTTTAAAAAGTAAGCATTTATGTGTTTCCATAACTGACATCTGATGCAGACCTC >7995_7995_1_ATP5I-CBX5_ATP5I_chr4_667092_ENST00000304312_CBX5_chr12_54635689_ENST00000209875_length(amino acids)=157AA_BP= MSSLSVCSLNLTLTFFPSGLRKLWTLFLLGQVWAQEPYSFHLSLGAQPAPLPNRALSAFPLLGPRFVIHEKAQGPGSLRSHSGSLCFVDS -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ATP5I-CBX5 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ATP5I-CBX5 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ATP5I-CBX5 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | C0009402 | Colorectal Carcinoma | 1 | CTD_human | |
| Tgene | C0009404 | Colorectal Neoplasms | 1 | CTD_human |
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