Fusion gene information | Fusion gene name: ATP6V0A1-IER3 |
Fusion gene ID: hg535tg8870 | | Hgene | Tgene | Gene symbol | ATP6V0A1 | IER3 | Gene ID | 535 | 8870 | Gene name | ATPase H+ transporting V0 subunit a1 | immediate early response 3 |
Synonyms | ATP6N1|ATP6N1A|Stv1|VPP1|Vph1|a1 | DIF-2|DIF2|GLY96|IEX-1|IEX-1L|IEX1|PRG1 |
Cytomap | ('ATP6V0A1')('IER3') 17q21.2 | 6p21.33 |
Type of gene | protein-coding | protein-coding |
Description | V-type proton ATPase 116 kDa subunit a isoform 1V-type proton ATPase 116 kDa subunit aATPase, H+ transporting, lysosomal V0 subunit a1ATPase, H+ transporting, lysosomal non-catalytic accessory protein 1 (110/116kD)H(+)-transporting two-sector ATPase, | radiation-inducible immediate-early gene IEX-1PACAP-responsive gene 1 proteinanti-death proteindifferentiation-dependent gene 2 proteinexpressed in pancreatic carcinomagly96, mouse, homolog ofimmediate early protein GLY96immediate early response 3 |
Modification date | 20200324 | 20200313 |
UniProtAcc | . | . |
Ensembl transtripts involved in fusion gene | ENST00000264649, ENST00000343619, ENST00000544137, ENST00000587797, ENST00000393829, ENST00000537728, ENST00000546249, ENST00000585525,
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Fusion gene scores | * DoF score | 20 X 17 X 9=3060 | 4 X 3 X 2=24 |
# samples | 22 | 4 |
** MAII score | log2(22/3060*10)=-3.79795622405535 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/24*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 |
Context | PubMed: ATP6V0A1 [Title/Abstract] AND IER3 [Title/Abstract] AND fusion [Title/Abstract] |
Most frequent breakpoint | ATP6V0A1(40673667)-IER3(30711821), # samples:1
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Anticipated loss of major functional domain due to fusion event. | |
Hgene | Tgene |
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FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |