Fusion gene information | Fusion gene name: BRWD1-UBE2J1 |
Fusion gene ID: hg54014tg51465 | | Hgene | Tgene | Gene symbol | BRWD1 | UBE2J1 | Gene ID | 54014 | 51465 | Gene name | bromodomain and WD repeat domain containing 1 | ubiquitin conjugating enzyme E2 J1 |
Synonyms | C21orf107|DCAF19|N143|WDR9|WRD9 | CGI-76|HSPC153|HSPC205|HSU93243|NCUBE-1|NCUBE1|UBC6|UBC6E|Ubc6p |
Cytomap | ('BRWD1')('UBE2J1') 21q22.2 | 6q15 |
Type of gene | protein-coding | protein-coding |
Description | bromodomain and WD repeat-containing protein 1WD repeat protein WDR9-form2WD repeat-containing protein 9transcriptional unit N143 | ubiquitin-conjugating enzyme E2 J1E2 ubiquitin-conjugating enzyme J1HSUBC6enon-canonical ubiquitin-conjugating enzyme 1ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)ubiquitin-conjugating enzyme E2, J1, Uyeast ubiquitin-conjugating enzyme |
Modification date | 20200313 | 20200313 |
UniProtAcc | . | . |
Ensembl transtripts involved in fusion gene | ENST00000333229, ENST00000341322, ENST00000342449, ENST00000380800, ENST00000470108, | |
Fusion gene scores | * DoF score | 28 X 28 X 10=7840 | 4 X 4 X 3=48 |
# samples | 32 | 4 |
** MAII score | log2(32/7840*10)=-4.61470984411521 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 |
Context | PubMed: BRWD1 [Title/Abstract] AND UBE2J1 [Title/Abstract] AND fusion [Title/Abstract] |
Most frequent breakpoint | BRWD1(40646983)-UBE2J1(90037370), # samples:1
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Anticipated loss of major functional domain due to fusion event. | |
Hgene | Tgene |
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FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |