![]() |
||||||
|
![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:ARL15-ITGA1 (FusionGDB2 ID:HG54622TG3672) |
Fusion Gene Summary for ARL15-ITGA1 |
![]() |
Fusion gene information | Fusion gene name: ARL15-ITGA1 | Fusion gene ID: hg54622tg3672 | Hgene | Tgene | Gene symbol | ARL15 | ITGA1 | Gene ID | 54622 | 3672 |
Gene name | ADP ribosylation factor like GTPase 15 | integrin subunit alpha 1 | |
Synonyms | ARFRP2 | CD49a|VLA1 | |
Cytomap | ('ARL15')('ITGA1') 5q11.2 | 5q11.2 | |
Type of gene | protein-coding | protein-coding | |
Description | ADP-ribosylation factor-like protein 15ADP-ribosylation factor-like 15ADP-ribosylation factor-related protein 2ARF-related protein 2 | integrin alpha-1CD49 antigen-like family member AVLA-1laminin and collagen receptorvery late activation protein 1 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | P56199 | |
Ensembl transtripts involved in fusion gene | ENST00000504924, ENST00000507646, ENST00000502271, ENST00000510591, | ||
Fusion gene scores | * DoF score | 18 X 13 X 7=1638 | 3 X 3 X 2=18 |
# samples | 18 | 3 | |
** MAII score | log2(18/1638*10)=-3.18586654531133 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: ARL15 [Title/Abstract] AND ITGA1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ARL15(53409032)-ITGA1(52243175), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | ARL15-ITGA1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ARL15-ITGA1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ARL15-ITGA1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ARL15-ITGA1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
![]() |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | ITGA1 | GO:0032516 | positive regulation of phosphoprotein phosphatase activity | 15592458 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
![]() |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
![]() |
![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SARC | TCGA-HS-A5N8-01A | ARL15 | chr5 | 53409032 | - | ITGA1 | chr5 | 52243175 | + |
Top |
Fusion Gene ORF analysis for ARL15-ITGA1 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000504924 | ENST00000504086 | ARL15 | chr5 | 53409032 | - | ITGA1 | chr5 | 52243175 | + |
5CDS-intron | ENST00000507646 | ENST00000504086 | ARL15 | chr5 | 53409032 | - | ITGA1 | chr5 | 52243175 | + |
5UTR-3CDS | ENST00000502271 | ENST00000282588 | ARL15 | chr5 | 53409032 | - | ITGA1 | chr5 | 52243175 | + |
5UTR-3CDS | ENST00000510591 | ENST00000282588 | ARL15 | chr5 | 53409032 | - | ITGA1 | chr5 | 52243175 | + |
5UTR-intron | ENST00000502271 | ENST00000504086 | ARL15 | chr5 | 53409032 | - | ITGA1 | chr5 | 52243175 | + |
5UTR-intron | ENST00000510591 | ENST00000504086 | ARL15 | chr5 | 53409032 | - | ITGA1 | chr5 | 52243175 | + |
In-frame | ENST00000504924 | ENST00000282588 | ARL15 | chr5 | 53409032 | - | ITGA1 | chr5 | 52243175 | + |
In-frame | ENST00000507646 | ENST00000282588 | ARL15 | chr5 | 53409032 | - | ITGA1 | chr5 | 52243175 | + |
![]() |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000504924 | ARL15 | chr5 | 53409032 | - | ENST00000282588 | ITGA1 | chr5 | 52243175 | + | 7477 | 556 | 1 | 717 | 238 |
ENST00000507646 | ARL15 | chr5 | 53409032 | - | ENST00000282588 | ITGA1 | chr5 | 52243175 | + | 7480 | 559 | 1 | 720 | 239 |
![]() |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000504924 | ENST00000282588 | ARL15 | chr5 | 53409032 | - | ITGA1 | chr5 | 52243175 | + | 0.001359875 | 0.9986401 |
ENST00000507646 | ENST00000282588 | ARL15 | chr5 | 53409032 | - | ITGA1 | chr5 | 52243175 | + | 0.001360349 | 0.99863964 |
Top |
Fusion Genomic Features for ARL15-ITGA1 |
![]() |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
ARL15 | chr5 | 53409031 | - | ITGA1 | chr5 | 52243174 | + | 0.000111995 | 0.99988794 |
ARL15 | chr5 | 53409031 | - | ITGA1 | chr5 | 52243174 | + | 0.000111995 | 0.99988794 |
![]() |
![]() |
![]() |
![]() |
Top |
Fusion Protein Features for ARL15-ITGA1 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr5:53409032/chr5:52243175) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
![]() |
![]() |
Hgene | Tgene |
. | ITGA1 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Integrin alpha-1/beta-1 is a receptor for laminin and collagen. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Involved in anchorage-dependent, negative regulation of EGF-stimulated cell growth. {ECO:0000269|PubMed:15592458}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ARL15 | chr5:53409032 | chr5:52243175 | ENST00000504924 | - | 4 | 5 | 142_145 | 154 | 205.0 | Nucleotide binding | GTP |
Hgene | ARL15 | chr5:53409032 | chr5:52243175 | ENST00000504924 | - | 4 | 5 | 39_46 | 154 | 205.0 | Nucleotide binding | GTP |
Hgene | ARL15 | chr5:53409032 | chr5:52243175 | ENST00000504924 | - | 4 | 5 | 82_86 | 154 | 205.0 | Nucleotide binding | GTP |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 1167_1171 | 1126 | 1180.0 | Motif | Note=GFFKR motif | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 1165_1179 | 1126 | 1180.0 | Topological domain | Cytoplasmic | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 1142_1164 | 1126 | 1180.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 498_506 | 1126 | 1180.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 580_588 | 1126 | 1180.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 642_650 | 1126 | 1180.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 161_360 | 1126 | 1180.0 | Domain | VWFA | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 101_160 | 1126 | 1180.0 | Repeat | FG-GAP 2 | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 30_91 | 1126 | 1180.0 | Repeat | FG-GAP 1 | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 365_417 | 1126 | 1180.0 | Repeat | FG-GAP 3 | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 422_475 | 1126 | 1180.0 | Repeat | FG-GAP 4 | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 476_538 | 1126 | 1180.0 | Repeat | FG-GAP 5 | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 557_615 | 1126 | 1180.0 | Repeat | FG-GAP 6 | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 619_679 | 1126 | 1180.0 | Repeat | FG-GAP 7 | |
Tgene | ITGA1 | chr5:53409032 | chr5:52243175 | ENST00000282588 | 26 | 29 | 29_1141 | 1126 | 1180.0 | Topological domain | Extracellular |
Top |
Fusion Gene Sequence for ARL15-ITGA1 |
![]() |
>6562_6562_1_ARL15-ITGA1_ARL15_chr5_53409032_ENST00000504924_ITGA1_chr5_52243175_ENST00000282588_length(transcript)=7477nt_BP=556nt GTTGCTGGCTTTTTCAGGAGCTGCTCGCTCGCAGCCAGAGACGCTGCTTTTTTTTTCCGGGTTCGGAGCCGTTCCGGATGCTTTAGGCTG CCGGATGTCTGATCTCCGAATAACTGAGGCGTTTCTGTACATGGATTATCTGTGTTTTAGAGCACTTTGCTGCAAGGGACCACCACCTGC ACGACCAGAATATGACCTGGTTTGCATAGGCCTCACAGGTTCTGGCAAAACCAGTCTGTTGTCCAAACTCTGCAGTGAAAGCCCCGATAA CGTCGTGTCGACCACAGGTTTTAGTATTAAAGCAGTGCCATTCCAGAATGCCATCTTGAATGTAAAAGAACTTGGAGGGGCTGATAACAT CCGGAAATACTGGAGCCGCTACTACCAAGGATCTCAAGGGGTAATATTTGTATTAGACAGTGCCTCTTCAGAGGATGATTTAGAAGCTGC TAGAAATGAGCTGCACTCAGCTCTTCAGCATCCACAGTTATGCACTTTACCCTTTTTAATATTGGCCAATCATCAAGACAAGCCAGCAGC TCGCTCAGTACAAGAGCTTGCTATTCAAATATCCAAAGATGGGCTACCGGGCAGAGTGCCATTATGGGTCATCCTGCTGAGTGCTTTTGC CGGATTGTTGCTGTTAATGCTGCTCATTTTAGCACTGTGGAAGATTGGATTCTTCAAAAGACCACTGAAAAAGAAAATGGAGAAATGAAA TATTTTATGAAAGAAAATAATAACAATTATTCAATAATCTATCCTCAGGTTTGCCTCAAATATGTGACAAGAAATGTATAATTCATGACA TAGTCATGTAACTATGTAATCCATCAGGGATTCATTACTTGGAAAATGACAGGTCATGCATTATCCAAAAACAATACCAAAAAGACATAT TTTATAAAATGACAAAAAATATTTTACATAATTACTCATTTTTGTTGAGTAAGCAAAATTACAAAGTGTTTTTAAAAAAACCTGTACAAA TATGTTTATGTATTAAATCACCATCCAAAATATTTAAGGAATATATAAAAAGATTTTTATGATCATAGAAACATCTATTTTCAAAACAAT ATAAATTAAGCTTTTCCCCTTGATTCCTGTTGGATATCCATGTTCAGCATGACAGTCAGCACTCGTAAATGCCAAGAAAAGAATTACCTG AAAAAGATCATTTCTCCCTATTCAAATGAGAATATTTTCCCTTGGTAGAATCCATATACAATATGGATTGAAAATTAAGTCACCAAGAAT ACATTTAGCATCTTTGTGTTGGGTTCTATACCTAAAAATTTTCCCTCCCTGCCCAAGGTGATTGGAAAGTACTGCAATTGAGCTAAAATT TTATCTAGGATGGAAAATCAGGATAGACTCGTTTAAAAACAAGTATATTAAATGGGTTAAATTAAGCTTTTACAGAACATGCTTAATTTT GATATTGAGCTCTAAATGCAAAACTCTTTTATACTGAAAAAACACTTAAAGTAGTTTTGTGTGGCATCACAGTGATTTGTCATGAAAAGC CATATATGGGGGACATGCTAAAATGGCTTCTGAATGAAATACGACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAG CAGCTTTTGAATGCTAAGGGTTCCAGTATGTGACCCAAAGAAAGAGTTGTCTCAACTCCTTGGTACAGGGTTCATTCAAACCCCCAAGCT GTGAGAGTGTGTTTATTTTTAATTTTTTAAAAGGTATTTAATTTCCAACCACACTTCTTATTTTTTTGAAAAGACAATTTTCCATTTCAG TATTACATTTTACCAAGAAGTCACTGCTTTTTAGGTGTGTTGCATCAATATTTAAATAAAATCCCAGAAATGTATTTTAAAGAATTTCAG GTTTGAAAACTCAAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAGTCATTATGGTTCATTGGAATCTAC TGTAGCATAAGCTCCTAGGTTGCTCCATTTCTTAGGAAAATAGCAATGAATGAATGTATAGTAGCTGCATGTGTGAACTACTGCTGTAAA GTTTGCTGACATTTCTGCAACAACATTTCTCCATCTGATTTACCAGAACCTGTAACAAGACCAGAACATGTATTCATCCAGAAACTCCTG GGCTCTGCTTTGTTCAAAGAGGAGCAAATCCACATAGAAATTAAATGTTATAAATTTATTTTTTTAAACTAATTTCCAAAGAATTTAGCT GAAGACTCAGAGTCAGCCTACCTCTTGACTCTCCACATCCGCATCTAAGATCCTGAAGGCCAAAGGAATGCGCCTGTGGGATGCCAAAGC CATCAGTAGCTGGAAGAAAGAATACCTCTTTCTAGAGGTTTGGTGTCCTCTTGCTGGCCTGTCATTATTTGGAAATACGCGCTTTTGGAA TTTCCTTCATTTTCGCTATTTCCAGGTTCAGAAATCATACCTACCACTTGTTCTTTCTTTGCCCAGTAAAACTCAGGGTTTCTCTTATTC AGAGTTACCATGTTGCACACCCCCAGTGCTCAGCCTGCCCAGAAGCCCTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGAT CCATTGAAATTCATACTCAGCATCTGTGACTACTAGACAAAGCCCATTTACTGAACCATAAGTGTGCACTTTTAAACTAAATTGTTAACT GAAAGGGAAAAAATAGAAATGAGGGCATTTTGAAGTTTTTAGAAAAGAGAGGAAGAGCTGTTGGCCAGATCAAAGAGATACTTATAAGCC CGGCACAATTTTTAACATAAGTCATTCCTGGCTATTAAGTAAAATATTTCATGAACCAGAAGTCCTGTTTCTCTAATATTATAATTTGTT GAGGTTTGTGTGTGTGTGTGTGTGCATGTGCAGACACATGTACACATATAAATTGAATACAAAAATAGCTCTATAACACCAAAAAACAGA GTTTACAGAAAATAAACACAAAAGCTATATCTGCAAGACAAGTTTGATTCATCTAGTTTCATATAGTTTCATATAGTTTCATTTTTATTA ATATTTAGGTTTAACTTATAGTTCTGCAATTATTTAAAAAACAAGTACAGAGCGTTTGATTAAAAAAAGTCAACAAATGTTTCAAAACAG CTTTGTACAAATGTTATAAAACATATTTAATGATTAAGAAATGTACTAGACTCTATCATTTACTTTTAAAACATTTAATTAGAAAAACAG GTGATATTTAAGACTATTTATAAACTTATTGGCCAAATTGCCAAAAAGTTTCTTTTTCTCTAACTTTGGTATTCTAAATAATTGATTATT GCTCCCATTGTAAACTGAACCATGTATGCACTCTCTTTTCTGACCAAACTACAATGGTATATTGGTAAATTATTTAACAACACACTGTCC AGGAGGGAAAAAAAAAACAGTCTCTGATTTGTATCATTTGCCAATTTCCATGGTCCAAATATTCTCTCTCCATTTTCAAACTACCAAAGT GACCCTAATCAGCTTACAAAATTCCTGGAAATGTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGACAGA TTACACGATAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATATTGATAGAGAACATGTTGTGTCTATATA CATATCCAATGACACACAGTATAATCATGTTTTAAATTATGCCAAAAGTACTGATTATATCAAGCCCAGTAAACATAATGCTACACAGCA CCCATTCTTTAATTTTGATTTCTAAAATTATAACCTTCCTTTGATATTAATAAAATGTTATGAACTTGCAGGAGAAGGAAGGAGTTGAAA GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACAAAAAAATTGTCTCATTTTCCCAAGGAATTCAAAGTC CTGTGATACACATTACAAAAGATGACACTTTGTAAATATTTTGAACTTCTATGATCCAATTTCAACTTCATTGGTCCAATTTGTCAAACT ATTTTCCTCTGAGCACTAGATTCATGGGCAATTTAATCTCTGAATATTTTCTGTGTCATAAGTGTGCTTGAAAAGAGGCTTGTAGTAAAC AGATATTTTTACAAAATTTGATGCTTCTGCAACCATAATAATTTTATCTATAAATGCGTATATACATATATATATATATATATATACACA TACACTCACATGCAGATATTTACATATATAGATATTCTCTTTTCCTTTTATAAAATCAAAGTCTAGGCTCAATTGGAAAATGGAAATATT TGCACCAAAAGAAAAAAGTGCCATTGTTGTGATCAATGGAGTAAAGCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTC CAAGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCT GTAATCTACTCCATGGGAACTGACTGTCCTGCTTTTCACAACATTGAGAAACAGGCCCAGAGCCTGTCTCATGTGCCAGGTGCAGTCACA TTATTGTTAAAATAAAGTGGCTTCTGACAAATCAGTTTTTCAAAATAGCATCCTATGTACTTTTCATTTCTTCCAACAACCCTCAGGCCC CCTTTTGCCAGTTTTCTCCCCCAGGGGAGATTTTCAAGACTACTGGAGAAAAATCTGTTAATAAAACATTTGCTCTGAGTACCAGCTTCA GTGACTCAATCATTTATACAGGATTTCAGTGTTTTGTTCTGCAGCGGTGTTCTAAAGGGTTCACATAGTATAATGGAGGAGGGACAAAGC AGAATATACTTCCAAGCTGGAACATCTTTAAGACATTTACAAACTGTTATGGGACACTATCAGCAACTACGCCTGGGGAAGCTAGCAGGA TTTAGCTCTTCAATGGCCCTCCAAATGCACCCAACAATCGCCAACCTCACCCATGGAAATCATCTAAAAAATGAAAAGAAGGGCCTTAAA GTCCTCACATGGATGCTGTATTTATAACTAAAATGTACAGTTTAATTCTAAATAGCAGGCTTTTAAATGCAAACAGCTTCCAGGTGAGTC CTCTGGCTGCCAATCAGACTGCTGATTCTAAACCATTCTCACACAGAATTTCTGAAACCAACACCAGGTATTAATTGTTAACTGCAGTGA AAGGAAACCAAGGCACATTACAAAAGGCTAAATGCTGCTGTTTCTAAGTGGAAGCACTGTTGAACAACACTCTTAGGTGGAATAAGAAAA TTAGGGTTAAACTGTAACATTGTAATCGGACGAACAAATCAGCATCTTTGATCCTCAGGTTAAAATTTAATCTTAAATTTAGAAATTCAA AGTAACAGCCTTTAACCATTAACCTTGAGGAAAATGTGAAGTAGCATCTGGAGTCTCTTAAGCCCCAGCCCTGTTGTCCCCTACAGCATC TCCACCCAGGAAGTCCAGTTCCTAACTAATGGGAATGGATCCTTTTCCCATTATAAAGGGCCGATGCTTAACCCTTGAACCCACTACTGT TCTTATGCCCCAAGATCTGCACCTTACATCAGGCACCCGGGAATGCTTCTCATTGAAATTTTACCATACCAAAAAATATGTAAGGGTGAC TCATCACTCCTAACTTTGGACTCCTTGCTTTGAGATCGGTATTTTTTTCTCTCTCTTTACATATAGCAAAAGCTTTCCCCAGTAGCTGAT GAATTTAGAACTTTATACAAGACTCCCTAGCATTTTCCTCCTCCCACAGGCTGGAGAATTTCAGTGCTATGAGACTGGGCAGTAGGAGCC AGAGCCAATTTGCAGGATCTCTTTTCCTTCTGCCTTCCAGTTGGCTTCTCTTCTCAGCTGCGTGGTGGGGATGATTTGGGGTTTCCTCAG CAAGGCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTTTGTTGGTGAGCAGACACTCAGAGATCCTTTAA TTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTCATAACTATGTTTACATTTGGCTTTAGCATATTTCAGG TAATATCTTTATGAAAAAAAGATGAAGTATGGAATTGTAGGAACTCTTTTGCAATAGACTGAGATCCAATGTTTAAATCTTTTTATTTCA GTTTGATCTGTGCCTTTAGATTGGGGACAAAATTTTAAAAACAAATCTTCCAAATGACACCACAATGAAAGCCAGTTGTGGTCTTGAAAA ATCTCTCTATTGCATTACTTATCCTCACCCTTGTTTTTTAAGAGGTAGAGAGAGATTACTGGGAAGCAGTGAGCCAACATAATTGTCCTT TCCTCTACAGAATAGCTGTGCAGAAGGGGACCACCACACTTAGGACCAGTGCCAGGTGACAATCTTTCCGTCATGCTGCTGCAGCATTTT GCACCTTGAGAGACAGGAAAAAAAATGGGGGTGAGGGAGTGGAAGATGATGAAACTATTTCTCTTTTATGTCTACATCCTTACTCCTCAA AATACTTTAAGCTCACTCAGACCCCATATACCCTGCCCACAATACTAACACATGTACTTTGCATAAGTAAATTGTTGATTAAATAAGAGC AAAACTATATTCTTATGTGTAGATTAACCAAGGCTAATTTCCTGGAGTTTAATACACTTTGGATTCAAGTAAAAACAATCACTTAATGCA GCAACATCTCAGACCCTCTTCACTCTAGAACCGTTTTATACAAGAGAACTCAACATTTACTGTTTTATTTCTGATATTGCCTGCCATTAC TCAGGATGCAAGAGATGCTCTGCATTCCTTATTAGGAAAAATTGGCCTGTAAGGAGAATGGTATACTGCGTATTACTACTGTGAGACTGT AAAATTGTTAATGGACAGTGTAAAGAATTGTATTCATTTTATTAGCAAGAAAAATATTGCATACAAGAACTACTGCCCTGAAATATCCAT CACTCCAATGAACTGTTCTGCCTGATCTAACATAAAGTTATATTTCATTGCTCATTTTTTTTTGCCTCACTAAAATGACTAACTTAAGGG AATGTGCATTTCTACAAGACTTTAATTGGATAAACTCATTAGAAGAAAATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGT TGACTCTTGTAATTTATTATATGCTTCATTTAAACCCATTTTGTAAAGAAATCAGGTAACAGTCATTTAATCTGATATAATTAGAAATAG CTGAGAGAGTAAAAAAGCATTTTGAATGTCCTATGTATGGCATATCCTGTACACCAATTGAAGGTCAGAGCTTTGGTATTTTTGTATAAT TCTGTCTTATCTGGTGCATCAGCTGTGTATTTTACGTCAAGGTAAATGAGCATCCTGTTTTATATGTTAAATTTTAAAAATGACTTTTTC AAAGAAG >6562_6562_1_ARL15-ITGA1_ARL15_chr5_53409032_ENST00000504924_ITGA1_chr5_52243175_ENST00000282588_length(amino acids)=238AA_BP=185 LLAFSGAARSQPETLLFFSGFGAVPDALGCRMSDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPDN VVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELHSALQHPQLCTLPFLILANHQDKPAA RSVQELAIQISKDGLPGRVPLWVILLSAFAGLLLLMLLILALWKIGFFKRPLKKKMEK -------------------------------------------------------------- >6562_6562_2_ARL15-ITGA1_ARL15_chr5_53409032_ENST00000507646_ITGA1_chr5_52243175_ENST00000282588_length(transcript)=7480nt_BP=559nt GCTGTTGCTGGCTTTTTCAGGAGCTGCTCGCTCGCAGCCAGAGACGCTGCTTTTTTTTTCCGGGTTCGGAGCCGTTCCGGATGCTTTAGG CTGCCGGATGTCTGATCTCCGAATAACTGAGGCGTTTCTGTACATGGATTATCTGTGTTTTAGAGCACTTTGCTGCAAGGGACCACCACC TGCACGACCAGAATATGACCTGGTTTGCATAGGCCTCACAGGTTCTGGCAAAACCAGTCTGTTGTCCAAACTCTGCAGTGAAAGCCCCGA TAACGTCGTGTCGACCACAGGTTTTAGTATTAAAGCAGTGCCATTCCAGAATGCCATCTTGAATGTAAAAGAACTTGGAGGGGCTGATAA CATCCGGAAATACTGGAGCCGCTACTACCAAGGATCTCAAGGGGTAATATTTGTATTAGACAGTGCCTCTTCAGAGGATGATTTAGAAGC TGCTAGAAATGAGCTGCACTCAGCTCTTCAGCATCCACAGTTATGCACTTTACCCTTTTTAATATTGGCCAATCATCAAGACAAGCCAGC AGCTCGCTCAGTACAAGAGCTTGCTATTCAAATATCCAAAGATGGGCTACCGGGCAGAGTGCCATTATGGGTCATCCTGCTGAGTGCTTT TGCCGGATTGTTGCTGTTAATGCTGCTCATTTTAGCACTGTGGAAGATTGGATTCTTCAAAAGACCACTGAAAAAGAAAATGGAGAAATG AAATATTTTATGAAAGAAAATAATAACAATTATTCAATAATCTATCCTCAGGTTTGCCTCAAATATGTGACAAGAAATGTATAATTCATG ACATAGTCATGTAACTATGTAATCCATCAGGGATTCATTACTTGGAAAATGACAGGTCATGCATTATCCAAAAACAATACCAAAAAGACA TATTTTATAAAATGACAAAAAATATTTTACATAATTACTCATTTTTGTTGAGTAAGCAAAATTACAAAGTGTTTTTAAAAAAACCTGTAC AAATATGTTTATGTATTAAATCACCATCCAAAATATTTAAGGAATATATAAAAAGATTTTTATGATCATAGAAACATCTATTTTCAAAAC AATATAAATTAAGCTTTTCCCCTTGATTCCTGTTGGATATCCATGTTCAGCATGACAGTCAGCACTCGTAAATGCCAAGAAAAGAATTAC CTGAAAAAGATCATTTCTCCCTATTCAAATGAGAATATTTTCCCTTGGTAGAATCCATATACAATATGGATTGAAAATTAAGTCACCAAG AATACATTTAGCATCTTTGTGTTGGGTTCTATACCTAAAAATTTTCCCTCCCTGCCCAAGGTGATTGGAAAGTACTGCAATTGAGCTAAA ATTTTATCTAGGATGGAAAATCAGGATAGACTCGTTTAAAAACAAGTATATTAAATGGGTTAAATTAAGCTTTTACAGAACATGCTTAAT TTTGATATTGAGCTCTAAATGCAAAACTCTTTTATACTGAAAAAACACTTAAAGTAGTTTTGTGTGGCATCACAGTGATTTGTCATGAAA AGCCATATATGGGGGACATGCTAAAATGGCTTCTGAATGAAATACGACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCT GAGCAGCTTTTGAATGCTAAGGGTTCCAGTATGTGACCCAAAGAAAGAGTTGTCTCAACTCCTTGGTACAGGGTTCATTCAAACCCCCAA GCTGTGAGAGTGTGTTTATTTTTAATTTTTTAAAAGGTATTTAATTTCCAACCACACTTCTTATTTTTTTGAAAAGACAATTTTCCATTT CAGTATTACATTTTACCAAGAAGTCACTGCTTTTTAGGTGTGTTGCATCAATATTTAAATAAAATCCCAGAAATGTATTTTAAAGAATTT CAGGTTTGAAAACTCAAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAGTCATTATGGTTCATTGGAATC TACTGTAGCATAAGCTCCTAGGTTGCTCCATTTCTTAGGAAAATAGCAATGAATGAATGTATAGTAGCTGCATGTGTGAACTACTGCTGT AAAGTTTGCTGACATTTCTGCAACAACATTTCTCCATCTGATTTACCAGAACCTGTAACAAGACCAGAACATGTATTCATCCAGAAACTC CTGGGCTCTGCTTTGTTCAAAGAGGAGCAAATCCACATAGAAATTAAATGTTATAAATTTATTTTTTTAAACTAATTTCCAAAGAATTTA GCTGAAGACTCAGAGTCAGCCTACCTCTTGACTCTCCACATCCGCATCTAAGATCCTGAAGGCCAAAGGAATGCGCCTGTGGGATGCCAA AGCCATCAGTAGCTGGAAGAAAGAATACCTCTTTCTAGAGGTTTGGTGTCCTCTTGCTGGCCTGTCATTATTTGGAAATACGCGCTTTTG GAATTTCCTTCATTTTCGCTATTTCCAGGTTCAGAAATCATACCTACCACTTGTTCTTTCTTTGCCCAGTAAAACTCAGGGTTTCTCTTA TTCAGAGTTACCATGTTGCACACCCCCAGTGCTCAGCCTGCCCAGAAGCCCTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACG GATCCATTGAAATTCATACTCAGCATCTGTGACTACTAGACAAAGCCCATTTACTGAACCATAAGTGTGCACTTTTAAACTAAATTGTTA ACTGAAAGGGAAAAAATAGAAATGAGGGCATTTTGAAGTTTTTAGAAAAGAGAGGAAGAGCTGTTGGCCAGATCAAAGAGATACTTATAA GCCCGGCACAATTTTTAACATAAGTCATTCCTGGCTATTAAGTAAAATATTTCATGAACCAGAAGTCCTGTTTCTCTAATATTATAATTT GTTGAGGTTTGTGTGTGTGTGTGTGTGCATGTGCAGACACATGTACACATATAAATTGAATACAAAAATAGCTCTATAACACCAAAAAAC AGAGTTTACAGAAAATAAACACAAAAGCTATATCTGCAAGACAAGTTTGATTCATCTAGTTTCATATAGTTTCATATAGTTTCATTTTTA TTAATATTTAGGTTTAACTTATAGTTCTGCAATTATTTAAAAAACAAGTACAGAGCGTTTGATTAAAAAAAGTCAACAAATGTTTCAAAA CAGCTTTGTACAAATGTTATAAAACATATTTAATGATTAAGAAATGTACTAGACTCTATCATTTACTTTTAAAACATTTAATTAGAAAAA CAGGTGATATTTAAGACTATTTATAAACTTATTGGCCAAATTGCCAAAAAGTTTCTTTTTCTCTAACTTTGGTATTCTAAATAATTGATT ATTGCTCCCATTGTAAACTGAACCATGTATGCACTCTCTTTTCTGACCAAACTACAATGGTATATTGGTAAATTATTTAACAACACACTG TCCAGGAGGGAAAAAAAAAACAGTCTCTGATTTGTATCATTTGCCAATTTCCATGGTCCAAATATTCTCTCTCCATTTTCAAACTACCAA AGTGACCCTAATCAGCTTACAAAATTCCTGGAAATGTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGAC AGATTACACGATAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATATTGATAGAGAACATGTTGTGTCTAT ATACATATCCAATGACACACAGTATAATCATGTTTTAAATTATGCCAAAAGTACTGATTATATCAAGCCCAGTAAACATAATGCTACACA GCACCCATTCTTTAATTTTGATTTCTAAAATTATAACCTTCCTTTGATATTAATAAAATGTTATGAACTTGCAGGAGAAGGAAGGAGTTG AAAGAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACAAAAAAATTGTCTCATTTTCCCAAGGAATTCAAA GTCCTGTGATACACATTACAAAAGATGACACTTTGTAAATATTTTGAACTTCTATGATCCAATTTCAACTTCATTGGTCCAATTTGTCAA ACTATTTTCCTCTGAGCACTAGATTCATGGGCAATTTAATCTCTGAATATTTTCTGTGTCATAAGTGTGCTTGAAAAGAGGCTTGTAGTA AACAGATATTTTTACAAAATTTGATGCTTCTGCAACCATAATAATTTTATCTATAAATGCGTATATACATATATATATATATATATATAC ACATACACTCACATGCAGATATTTACATATATAGATATTCTCTTTTCCTTTTATAAAATCAAAGTCTAGGCTCAATTGGAAAATGGAAAT ATTTGCACCAAAAGAAAAAAGTGCCATTGTTGTGATCAATGGAGTAAAGCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCT CTCCAAGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACAC GCTGTAATCTACTCCATGGGAACTGACTGTCCTGCTTTTCACAACATTGAGAAACAGGCCCAGAGCCTGTCTCATGTGCCAGGTGCAGTC ACATTATTGTTAAAATAAAGTGGCTTCTGACAAATCAGTTTTTCAAAATAGCATCCTATGTACTTTTCATTTCTTCCAACAACCCTCAGG CCCCCTTTTGCCAGTTTTCTCCCCCAGGGGAGATTTTCAAGACTACTGGAGAAAAATCTGTTAATAAAACATTTGCTCTGAGTACCAGCT TCAGTGACTCAATCATTTATACAGGATTTCAGTGTTTTGTTCTGCAGCGGTGTTCTAAAGGGTTCACATAGTATAATGGAGGAGGGACAA AGCAGAATATACTTCCAAGCTGGAACATCTTTAAGACATTTACAAACTGTTATGGGACACTATCAGCAACTACGCCTGGGGAAGCTAGCA GGATTTAGCTCTTCAATGGCCCTCCAAATGCACCCAACAATCGCCAACCTCACCCATGGAAATCATCTAAAAAATGAAAAGAAGGGCCTT AAAGTCCTCACATGGATGCTGTATTTATAACTAAAATGTACAGTTTAATTCTAAATAGCAGGCTTTTAAATGCAAACAGCTTCCAGGTGA GTCCTCTGGCTGCCAATCAGACTGCTGATTCTAAACCATTCTCACACAGAATTTCTGAAACCAACACCAGGTATTAATTGTTAACTGCAG TGAAAGGAAACCAAGGCACATTACAAAAGGCTAAATGCTGCTGTTTCTAAGTGGAAGCACTGTTGAACAACACTCTTAGGTGGAATAAGA AAATTAGGGTTAAACTGTAACATTGTAATCGGACGAACAAATCAGCATCTTTGATCCTCAGGTTAAAATTTAATCTTAAATTTAGAAATT CAAAGTAACAGCCTTTAACCATTAACCTTGAGGAAAATGTGAAGTAGCATCTGGAGTCTCTTAAGCCCCAGCCCTGTTGTCCCCTACAGC ATCTCCACCCAGGAAGTCCAGTTCCTAACTAATGGGAATGGATCCTTTTCCCATTATAAAGGGCCGATGCTTAACCCTTGAACCCACTAC TGTTCTTATGCCCCAAGATCTGCACCTTACATCAGGCACCCGGGAATGCTTCTCATTGAAATTTTACCATACCAAAAAATATGTAAGGGT GACTCATCACTCCTAACTTTGGACTCCTTGCTTTGAGATCGGTATTTTTTTCTCTCTCTTTACATATAGCAAAAGCTTTCCCCAGTAGCT GATGAATTTAGAACTTTATACAAGACTCCCTAGCATTTTCCTCCTCCCACAGGCTGGAGAATTTCAGTGCTATGAGACTGGGCAGTAGGA GCCAGAGCCAATTTGCAGGATCTCTTTTCCTTCTGCCTTCCAGTTGGCTTCTCTTCTCAGCTGCGTGGTGGGGATGATTTGGGGTTTCCT CAGCAAGGCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTTTGTTGGTGAGCAGACACTCAGAGATCCTT TAATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTCATAACTATGTTTACATTTGGCTTTAGCATATTTC AGGTAATATCTTTATGAAAAAAAGATGAAGTATGGAATTGTAGGAACTCTTTTGCAATAGACTGAGATCCAATGTTTAAATCTTTTTATT TCAGTTTGATCTGTGCCTTTAGATTGGGGACAAAATTTTAAAAACAAATCTTCCAAATGACACCACAATGAAAGCCAGTTGTGGTCTTGA AAAATCTCTCTATTGCATTACTTATCCTCACCCTTGTTTTTTAAGAGGTAGAGAGAGATTACTGGGAAGCAGTGAGCCAACATAATTGTC CTTTCCTCTACAGAATAGCTGTGCAGAAGGGGACCACCACACTTAGGACCAGTGCCAGGTGACAATCTTTCCGTCATGCTGCTGCAGCAT TTTGCACCTTGAGAGACAGGAAAAAAAATGGGGGTGAGGGAGTGGAAGATGATGAAACTATTTCTCTTTTATGTCTACATCCTTACTCCT CAAAATACTTTAAGCTCACTCAGACCCCATATACCCTGCCCACAATACTAACACATGTACTTTGCATAAGTAAATTGTTGATTAAATAAG AGCAAAACTATATTCTTATGTGTAGATTAACCAAGGCTAATTTCCTGGAGTTTAATACACTTTGGATTCAAGTAAAAACAATCACTTAAT GCAGCAACATCTCAGACCCTCTTCACTCTAGAACCGTTTTATACAAGAGAACTCAACATTTACTGTTTTATTTCTGATATTGCCTGCCAT TACTCAGGATGCAAGAGATGCTCTGCATTCCTTATTAGGAAAAATTGGCCTGTAAGGAGAATGGTATACTGCGTATTACTACTGTGAGAC TGTAAAATTGTTAATGGACAGTGTAAAGAATTGTATTCATTTTATTAGCAAGAAAAATATTGCATACAAGAACTACTGCCCTGAAATATC CATCACTCCAATGAACTGTTCTGCCTGATCTAACATAAAGTTATATTTCATTGCTCATTTTTTTTTGCCTCACTAAAATGACTAACTTAA GGGAATGTGCATTTCTACAAGACTTTAATTGGATAAACTCATTAGAAGAAAATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTT TGTTGACTCTTGTAATTTATTATATGCTTCATTTAAACCCATTTTGTAAAGAAATCAGGTAACAGTCATTTAATCTGATATAATTAGAAA TAGCTGAGAGAGTAAAAAAGCATTTTGAATGTCCTATGTATGGCATATCCTGTACACCAATTGAAGGTCAGAGCTTTGGTATTTTTGTAT AATTCTGTCTTATCTGGTGCATCAGCTGTGTATTTTACGTCAAGGTAAATGAGCATCCTGTTTTATATGTTAAATTTTAAAAATGACTTT TTCAAAGAAG >6562_6562_2_ARL15-ITGA1_ARL15_chr5_53409032_ENST00000507646_ITGA1_chr5_52243175_ENST00000282588_length(amino acids)=239AA_BP=186 LLLAFSGAARSQPETLLFFSGFGAVPDALGCRMSDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSGKTSLLSKLCSESPD NVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELHSALQHPQLCTLPFLILANHQDKPA ARSVQELAIQISKDGLPGRVPLWVILLSAFAGLLLLMLLILALWKIGFFKRPLKKKMEK -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for ARL15-ITGA1 |
![]() |
![]() |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for ARL15-ITGA1 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for ARL15-ITGA1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | C0011860 | Diabetes Mellitus, Non-Insulin-Dependent | 1 | CTD_human | |
Tgene | C0017639 | Gliosis | 1 | CTD_human | |
Tgene | C3887640 | Astrocytosis | 1 | CTD_human |