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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:ATRX-ABCB7 (FusionGDB2 ID:HG546TG22) |
Fusion Gene Summary for ATRX-ABCB7 |
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Fusion gene information | Fusion gene name: ATRX-ABCB7 | Fusion gene ID: hg546tg22 | Hgene | Tgene | Gene symbol | ATRX | ABCB7 | Gene ID | 546 | 22 |
Gene name | ATRX chromatin remodeler | ATP binding cassette subfamily B member 7 | |
Synonyms | JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX | ABC7|ASAT|Atm1p|EST140535 | |
Cytomap | ('ATRX')('ABCB7') Xq21.1 | Xq13.3 | |
Type of gene | protein-coding | protein-coding | |
Description | transcriptional regulator ATRXATP-dependent helicase ATRXX-linked helicase IIX-linked nuclear proteinalpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) | ATP-binding cassette sub-family B member 7, mitochondrialABC transporter 7 proteinATP-binding cassette transporter 7ATP-binding cassette, sub-family B (MDR/TAP), member 7 | |
Modification date | 20200313 | 20200320 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000373344, ENST00000395603, ENST00000480283, ENST00000373341, | ||
Fusion gene scores | * DoF score | 17 X 13 X 9=1989 | 4 X 5 X 4=80 |
# samples | 23 | 4 | |
** MAII score | log2(23/1989*10)=-3.11233750988937 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/80*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ATRX [Title/Abstract] AND ABCB7 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ATRX(77041332)-ABCB7(74318897), # samples:1 ATRX(77041468)-ABCB7(74334669), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | ATRX-ABCB7 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ATRX-ABCB7 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ATRX-ABCB7 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ATRX-ABCB7 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ATRX | GO:0006334 | nucleosome assembly | 20651253 |
Hgene | ATRX | GO:0006338 | chromatin remodeling | 20651253 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SARC | TCGA-HB-A3YV-01A | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
ChimerDB4 | SARC | TCGA-HB-A3YV-01A | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
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Fusion Gene ORF analysis for ATRX-ABCB7 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000373344 | ENST00000534570 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
5CDS-intron | ENST00000395603 | ENST00000534570 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
5UTR-3CDS | ENST00000480283 | ENST00000253577 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
5UTR-3CDS | ENST00000480283 | ENST00000339447 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
5UTR-3CDS | ENST00000480283 | ENST00000373394 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
5UTR-intron | ENST00000480283 | ENST00000534570 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
In-frame | ENST00000373344 | ENST00000253577 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
In-frame | ENST00000373344 | ENST00000339447 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
In-frame | ENST00000373344 | ENST00000373394 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
In-frame | ENST00000395603 | ENST00000253577 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
In-frame | ENST00000395603 | ENST00000339447 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
In-frame | ENST00000395603 | ENST00000373394 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
intron-3CDS | ENST00000373341 | ENST00000253577 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-3CDS | ENST00000373341 | ENST00000253577 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
intron-3CDS | ENST00000373341 | ENST00000339447 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
intron-3CDS | ENST00000373341 | ENST00000373394 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
intron-3CDS | ENST00000373344 | ENST00000253577 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-3CDS | ENST00000395603 | ENST00000253577 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-3CDS | ENST00000480283 | ENST00000253577 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373341 | ENST00000339447 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373341 | ENST00000373394 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373341 | ENST00000534570 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373341 | ENST00000534570 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
intron-intron | ENST00000373344 | ENST00000339447 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373344 | ENST00000373394 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373344 | ENST00000534570 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000395603 | ENST00000339447 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000395603 | ENST00000373394 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000395603 | ENST00000534570 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000480283 | ENST00000339447 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000480283 | ENST00000373394 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000480283 | ENST00000534570 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000373344 | ATRX | chrX | 77041468 | - | ENST00000253577 | ABCB7 | chrX | 74334669 | - | 2419 | 235 | 274 | 2328 | 684 |
ENST00000373344 | ATRX | chrX | 77041468 | - | ENST00000339447 | ABCB7 | chrX | 74334669 | - | 2294 | 235 | 271 | 2205 | 644 |
ENST00000373344 | ATRX | chrX | 77041468 | - | ENST00000373394 | ABCB7 | chrX | 74334669 | - | 2412 | 235 | 271 | 2325 | 684 |
ENST00000395603 | ATRX | chrX | 77041468 | - | ENST00000253577 | ABCB7 | chrX | 74334669 | - | 2419 | 235 | 274 | 2328 | 684 |
ENST00000395603 | ATRX | chrX | 77041468 | - | ENST00000339447 | ABCB7 | chrX | 74334669 | - | 2294 | 235 | 271 | 2205 | 644 |
ENST00000395603 | ATRX | chrX | 77041468 | - | ENST00000373394 | ABCB7 | chrX | 74334669 | - | 2412 | 235 | 271 | 2325 | 684 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000373344 | ENST00000253577 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - | 0.001924131 | 0.99807584 |
ENST00000373344 | ENST00000339447 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - | 0.001517186 | 0.9984829 |
ENST00000373344 | ENST00000373394 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - | 0.001879935 | 0.99812 |
ENST00000395603 | ENST00000253577 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - | 0.001924131 | 0.99807584 |
ENST00000395603 | ENST00000339447 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - | 0.001517186 | 0.9984829 |
ENST00000395603 | ENST00000373394 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - | 0.001879935 | 0.99812 |
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Fusion Genomic Features for ATRX-ABCB7 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for ATRX-ABCB7 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chrX:77041332/chrX:74318897) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | 0 | 16 | 140_436 | 56 | 754.0 | Domain | ABC transmembrane type-1 | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | 0 | 16 | 472_706 | 56 | 754.0 | Domain | ABC transporter | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | 0 | 16 | 140_436 | 56 | 753.0 | Domain | ABC transmembrane type-1 | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | 0 | 16 | 472_706 | 56 | 753.0 | Domain | ABC transporter | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | 0 | 16 | 505_516 | 56 | 754.0 | Nucleotide binding | ATP | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | 0 | 16 | 505_516 | 56 | 753.0 | Nucleotide binding | ATP | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | 0 | 16 | 141_161 | 56 | 754.0 | Transmembrane | Helical | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | 0 | 16 | 186_206 | 56 | 754.0 | Transmembrane | Helical | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | 0 | 16 | 260_280 | 56 | 754.0 | Transmembrane | Helical | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | 0 | 16 | 291_311 | 56 | 754.0 | Transmembrane | Helical | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | 0 | 16 | 383_403 | 56 | 754.0 | Transmembrane | Helical | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | 0 | 16 | 410_430 | 56 | 754.0 | Transmembrane | Helical | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | 0 | 16 | 141_161 | 56 | 753.0 | Transmembrane | Helical | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | 0 | 16 | 186_206 | 56 | 753.0 | Transmembrane | Helical | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | 0 | 16 | 260_280 | 56 | 753.0 | Transmembrane | Helical | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | 0 | 16 | 291_311 | 56 | 753.0 | Transmembrane | Helical | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | 0 | 16 | 383_403 | 56 | 753.0 | Transmembrane | Helical | |
Tgene | ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | 0 | 16 | 410_430 | 56 | 753.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1151_1156 | 6 | 2493.0 | Compositional bias | Note=Poly-Ser |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1166_1169 | 6 | 2493.0 | Compositional bias | Note=Poly-Lys |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1202_1206 | 6 | 2493.0 | Compositional bias | Note=Poly-Ser |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1259_1266 | 6 | 2493.0 | Compositional bias | Note=Poly-Asp |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1443_1466 | 6 | 2493.0 | Compositional bias | Note=Poly-Glu |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1499_1502 | 6 | 2493.0 | Compositional bias | Note=Poly-Glu |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1929_1939 | 6 | 2493.0 | Compositional bias | Note=Poly-Lys |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1941_1948 | 6 | 2493.0 | Compositional bias | Note=Poly-Ser |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 2222_2225 | 6 | 2493.0 | Compositional bias | Note=Poly-Lys |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 2262_2265 | 6 | 2493.0 | Compositional bias | Note=Poly-Glu |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 2420_2425 | 6 | 2493.0 | Compositional bias | Note=Poly-Gln |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 745_750 | 6 | 2493.0 | Compositional bias | Note=Poly-Ser |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1151_1156 | 6 | 2455.0 | Compositional bias | Note=Poly-Ser |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1166_1169 | 6 | 2455.0 | Compositional bias | Note=Poly-Lys |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1202_1206 | 6 | 2455.0 | Compositional bias | Note=Poly-Ser |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1259_1266 | 6 | 2455.0 | Compositional bias | Note=Poly-Asp |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1443_1466 | 6 | 2455.0 | Compositional bias | Note=Poly-Glu |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1499_1502 | 6 | 2455.0 | Compositional bias | Note=Poly-Glu |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1929_1939 | 6 | 2455.0 | Compositional bias | Note=Poly-Lys |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1941_1948 | 6 | 2455.0 | Compositional bias | Note=Poly-Ser |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 2222_2225 | 6 | 2455.0 | Compositional bias | Note=Poly-Lys |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 2262_2265 | 6 | 2455.0 | Compositional bias | Note=Poly-Glu |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 2420_2425 | 6 | 2455.0 | Compositional bias | Note=Poly-Gln |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 745_750 | 6 | 2455.0 | Compositional bias | Note=Poly-Ser |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1581_1768 | 6 | 2493.0 | Domain | Helicase ATP-binding |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 159_296 | 6 | 2493.0 | Domain | ADD |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 2025_2205 | 6 | 2493.0 | Domain | Helicase C-terminal |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1581_1768 | 6 | 2455.0 | Domain | Helicase ATP-binding |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 159_296 | 6 | 2455.0 | Domain | ADD |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 2025_2205 | 6 | 2455.0 | Domain | Helicase C-terminal |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1719_1722 | 6 | 2493.0 | Motif | Note=DEGH box |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 581_594 | 6 | 2493.0 | Motif | Note=PxVxL motif |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1719_1722 | 6 | 2455.0 | Motif | Note=DEGH box |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 581_594 | 6 | 2455.0 | Motif | Note=PxVxL motif |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1594_1601 | 6 | 2493.0 | Nucleotide binding | ATP |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1594_1601 | 6 | 2455.0 | Nucleotide binding | ATP |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 170_206 | 6 | 2493.0 | Zinc finger | GATA-type%3B atypical |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 217_272 | 6 | 2493.0 | Zinc finger | PHD-type%3B atypical |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 170_206 | 6 | 2455.0 | Zinc finger | GATA-type%3B atypical |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 217_272 | 6 | 2455.0 | Zinc finger | PHD-type%3B atypical |
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Fusion Gene Sequence for ATRX-ABCB7 |
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>8343_8343_1_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000373344_ABCB7_chrX_74334669_ENST00000253577_length(transcript)=2419nt_BP=235nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGCAGATTCCAGAGTCATTAAAAAGTATCACATGGCA GAGATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCA TGGTCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTA TGTGTGGCCCAAAGACAGGCCAGATCTACGAGCTAGAGTTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGT TCCCTTCATGTTTAAATATGCTGTAGACAGCCTCAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAAC CATGGCAACAGCAGTTCTGATTGGCTATGGTGTATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGT AGCCCAGAATTCAATCCGAAGAATAGCCAAAAATGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGG AGCTTTATCTAAGGCTATTGACAGAGGAACAAGGGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGA AGTGATGCTTGTCAGTGGTGTTTTGTATTACAAATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATT CACAGTTGCAGTCACACGGTGGAGAACTAGATTTAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACT GCTGAATTATGAAACTGTGAAGTATTTTAATAATGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTC ATTGAAAAGTACCTCTACTCTGGCTATGCTGAACTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAG TCAGGGAATTGTGGCAGGTACCCTTACTGTTGGAGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCT GGGAACTGTATATAGAGAGACTAGACAAGCACTCATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAA AGTGATGGCATCTCCCCTTCAGATCACACCACAGACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGT CCTTAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCT ATTATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGC AGTGGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGA AGTGTATGCAGTGGCAAAATTAGCTGGACTTCATGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACT CAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTC ATCGTTAGATTCGATTACTGAAGAGACTATTCTTGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATT GTCAACAGTGGTTGATGCAGATGAAATCATTGTCTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCC TCATAGTATCTATTCAGAAATGTGGCATACACAGAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATAT ATCCAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGA >8343_8343_1_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000373344_ABCB7_chrX_74334669_ENST00000253577_length(amino acids)=684AA_BP= MGKGNSGQFLDAAKALQVWPLIEKRTCWHGHAGGGLHTDPKEGLKDVDTRKIIKAMLSYVWPKDRPDLRARVAISLGFLGGAKAMNIVVP FMFKYAVDSLNQMSGNMLNLSDAPNTVATMATAVLIGYGVSRAGAAFFNEVRNAVFGKVAQNSIRRIAKNVFLHLHNLDLGFHLSRQTGA LSKAIDRGTRGISFVLSALVFNLLPIMFEVMLVSGVLYYKCGAQFALVTLGTLGTYTAFTVAVTRWRTRFRIEMNKADNDAGNAAIDSLL NYETVKYFNNERYEAQRYDGFLKTYETASLKSTSTLAMLNFGQSAIFSVGLTAIMVLASQGIVAGTLTVGDLVMVNGLLFQLSLPLNFLG TVYRETRQALIDMNTLFTLLKVDTQIKDKVMASPLQITPQTATVAFDNVHFEYIEGQKVLSGISFEVPAGKKVAIVGGSGSGKSTIVRLL FRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYGNISASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLK LSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMKDVVKHRTSIFIAHRLSTVVDADEIIVLDQGKVAERGTHHGLLANPH -------------------------------------------------------------- >8343_8343_2_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000373344_ABCB7_chrX_74334669_ENST00000339447_length(transcript)=2294nt_BP=235nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAG ATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGG TCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGGCCATGAATATTGTGGTTCCCTTCATGTTTAAATATGCTGTAGACAGCCT CAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCATGGCAACAGCAGTTCTGATTGGCTATGGTGT ATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGCCCAGAATTCAATCCGAAGAATAGCCAAAAA TGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGCTTTATCTAAGGCTATTGACAGAGGAACAAG GGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGTGATGCTTGTCAGTGGTGTTTTGTATTACAA ATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCACAGTTGCAGTCACACGGTGGAGAACTAGATT TAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCTGAATTATGAAACTGTGAAGTATTTTAATAA TGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATTGAAAAGTACCTCTACTCTGGCTATGCTGAA CTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCAGGGAATTGTGGCAGGTACCCTTACTGTTGG AGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGGAACTGTATATAGAGAGACTAGACAAGCACT CATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGTGATGGCATCTCCCCTTCAGATCACACCACA GACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCTTAGTGGAATATCCTTTGAAGTCCCTGCAGG AAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATTATTTCGCTTCTATGAGCCTCAAAAGGGTAG CATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGTGGGAGTGGTACCTCAGGATGCTGTCCTCTT CCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGTGTATGCAGTGGCAAAATTAGCTGGACTTCA TGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGC AATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATCGTTAGATTCGATTACTGAAGAGACTATTCT TGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTCAACAGTGGTTGATGCAGATGAAATCATTGT CTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCATAGTATCTATTCAGAAATGTGGCATACACA GAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATCCAAAGAGGAGGAAAGAAAGAAACTACAAGA AGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGACATTTTCTTTTTTTGTTGTTTTGGACTACATAT >8343_8343_2_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000373344_ABCB7_chrX_74334669_ENST00000339447_length(amino acids)=644AA_BP= MGKGNSGQFLDAAKALQVWPLIEKRTCWHGHAGGGLHTDPKEGAMNIVVPFMFKYAVDSLNQMSGNMLNLSDAPNTVATMATAVLIGYGV SRAGAAFFNEVRNAVFGKVAQNSIRRIAKNVFLHLHNLDLGFHLSRQTGALSKAIDRGTRGISFVLSALVFNLLPIMFEVMLVSGVLYYK CGAQFALVTLGTLGTYTAFTVAVTRWRTRFRIEMNKADNDAGNAAIDSLLNYETVKYFNNERYEAQRYDGFLKTYETASLKSTSTLAMLN FGQSAIFSVGLTAIMVLASQGIVAGTLTVGDLVMVNGLLFQLSLPLNFLGTVYRETRQALIDMNTLFTLLKVDTQIKDKVMASPLQITPQ TATVAFDNVHFEYIEGQKVLSGISFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLF HNTIYYNLLYGNISASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLKLSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETIL GAMKDVVKHRTSIFIAHRLSTVVDADEIIVLDQGKVAERGTHHGLLANPHSIYSEMWHTQSSRVQNHDNPKWEAKKENISKEEERKKLQE -------------------------------------------------------------- >8343_8343_3_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000373344_ABCB7_chrX_74334669_ENST00000373394_length(transcript)=2412nt_BP=235nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAG ATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGG TCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTATGT GTGGCCCAAAGACAGGCCAGATCTACGAGCTAGAGTTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGTTCC CTTCATGTTTAAATATGCTGTAGACAGCCTCAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCAT GGCAACAGCAGTTCTGATTGGCTATGGTGTATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGC CCAGAATTCAATCCGAAGAATAGCCAAAAATGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGC TTTATCTAAGGCTATTGACAGAGGAACAAGGGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGT GATGCTTGTCAGTGGTGTTTTGTATTACAAATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCAC AGTTGCAGTCACACGGTGGAGAACTAGATTTAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCT GAATTATGAAACTGTGAAGTATTTTAATAATGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATT GAAAAGTACCTCTACTCTGGCTATGCTGAACTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCA GGGAATTGTGGCAGGTACCCTTACTGTTGGAGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGG AACTGTATATAGAGAGACTAGACAAGCACTCATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGT GATGGCATCTCCCCTTCAGATCACACCACAGACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCT TAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATT ATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGT GGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGT GTATGCAGTGGCAAAATTAGCTGGACTTCATGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAA GCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATC GTTAGATTCGATTACTGAAGAGACTATTCTTGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTC AACAGTGGTTGATGCAGATGAAATCATTGTCTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCA TAGTATCTATTCAGAAATGTGGCATACACAGAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATC CAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGACAT >8343_8343_3_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000373344_ABCB7_chrX_74334669_ENST00000373394_length(amino acids)=684AA_BP= MGKGNSGQFLDAAKALQVWPLIEKRTCWHGHAGGGLHTDPKEGLKDVDTRKIIKAMLSYVWPKDRPDLRARVAISLGFLGGAKAMNIVVP FMFKYAVDSLNQMSGNMLNLSDAPNTVATMATAVLIGYGVSRAGAAFFNEVRNAVFGKVAQNSIRRIAKNVFLHLHNLDLGFHLSRQTGA LSKAIDRGTRGISFVLSALVFNLLPIMFEVMLVSGVLYYKCGAQFALVTLGTLGTYTAFTVAVTRWRTRFRIEMNKADNDAGNAAIDSLL NYETVKYFNNERYEAQRYDGFLKTYETASLKSTSTLAMLNFGQSAIFSVGLTAIMVLASQGIVAGTLTVGDLVMVNGLLFQLSLPLNFLG TVYRETRQALIDMNTLFTLLKVDTQIKDKVMASPLQITPQTATVAFDNVHFEYIEGQKVLSGISFEVPAGKKVAIVGGSGSGKSTIVRLL FRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYGNISASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLK LSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMKDVVKHRTSIFIAHRLSTVVDADEIIVLDQGKVAERGTHHGLLANPH -------------------------------------------------------------- >8343_8343_4_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000395603_ABCB7_chrX_74334669_ENST00000253577_length(transcript)=2419nt_BP=235nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGCAGATTCCAGAGTCATTAAAAAGTATCACATGGCA GAGATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCA TGGTCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTA TGTGTGGCCCAAAGACAGGCCAGATCTACGAGCTAGAGTTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGT TCCCTTCATGTTTAAATATGCTGTAGACAGCCTCAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAAC CATGGCAACAGCAGTTCTGATTGGCTATGGTGTATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGT AGCCCAGAATTCAATCCGAAGAATAGCCAAAAATGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGG AGCTTTATCTAAGGCTATTGACAGAGGAACAAGGGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGA AGTGATGCTTGTCAGTGGTGTTTTGTATTACAAATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATT CACAGTTGCAGTCACACGGTGGAGAACTAGATTTAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACT GCTGAATTATGAAACTGTGAAGTATTTTAATAATGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTC ATTGAAAAGTACCTCTACTCTGGCTATGCTGAACTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAG TCAGGGAATTGTGGCAGGTACCCTTACTGTTGGAGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCT GGGAACTGTATATAGAGAGACTAGACAAGCACTCATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAA AGTGATGGCATCTCCCCTTCAGATCACACCACAGACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGT CCTTAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCT ATTATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGC AGTGGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGA AGTGTATGCAGTGGCAAAATTAGCTGGACTTCATGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACT CAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTC ATCGTTAGATTCGATTACTGAAGAGACTATTCTTGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATT GTCAACAGTGGTTGATGCAGATGAAATCATTGTCTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCC TCATAGTATCTATTCAGAAATGTGGCATACACAGAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATAT ATCCAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGA >8343_8343_4_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000395603_ABCB7_chrX_74334669_ENST00000253577_length(amino acids)=684AA_BP= MGKGNSGQFLDAAKALQVWPLIEKRTCWHGHAGGGLHTDPKEGLKDVDTRKIIKAMLSYVWPKDRPDLRARVAISLGFLGGAKAMNIVVP FMFKYAVDSLNQMSGNMLNLSDAPNTVATMATAVLIGYGVSRAGAAFFNEVRNAVFGKVAQNSIRRIAKNVFLHLHNLDLGFHLSRQTGA LSKAIDRGTRGISFVLSALVFNLLPIMFEVMLVSGVLYYKCGAQFALVTLGTLGTYTAFTVAVTRWRTRFRIEMNKADNDAGNAAIDSLL NYETVKYFNNERYEAQRYDGFLKTYETASLKSTSTLAMLNFGQSAIFSVGLTAIMVLASQGIVAGTLTVGDLVMVNGLLFQLSLPLNFLG TVYRETRQALIDMNTLFTLLKVDTQIKDKVMASPLQITPQTATVAFDNVHFEYIEGQKVLSGISFEVPAGKKVAIVGGSGSGKSTIVRLL FRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYGNISASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLK LSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMKDVVKHRTSIFIAHRLSTVVDADEIIVLDQGKVAERGTHHGLLANPH -------------------------------------------------------------- >8343_8343_5_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000395603_ABCB7_chrX_74334669_ENST00000339447_length(transcript)=2294nt_BP=235nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAG ATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGG TCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGGCCATGAATATTGTGGTTCCCTTCATGTTTAAATATGCTGTAGACAGCCT CAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCATGGCAACAGCAGTTCTGATTGGCTATGGTGT ATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGCCCAGAATTCAATCCGAAGAATAGCCAAAAA TGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGCTTTATCTAAGGCTATTGACAGAGGAACAAG GGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGTGATGCTTGTCAGTGGTGTTTTGTATTACAA ATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCACAGTTGCAGTCACACGGTGGAGAACTAGATT TAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCTGAATTATGAAACTGTGAAGTATTTTAATAA TGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATTGAAAAGTACCTCTACTCTGGCTATGCTGAA CTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCAGGGAATTGTGGCAGGTACCCTTACTGTTGG AGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGGAACTGTATATAGAGAGACTAGACAAGCACT CATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGTGATGGCATCTCCCCTTCAGATCACACCACA GACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCTTAGTGGAATATCCTTTGAAGTCCCTGCAGG AAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATTATTTCGCTTCTATGAGCCTCAAAAGGGTAG CATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGTGGGAGTGGTACCTCAGGATGCTGTCCTCTT CCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGTGTATGCAGTGGCAAAATTAGCTGGACTTCA TGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGC AATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATCGTTAGATTCGATTACTGAAGAGACTATTCT TGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTCAACAGTGGTTGATGCAGATGAAATCATTGT CTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCATAGTATCTATTCAGAAATGTGGCATACACA GAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATCCAAAGAGGAGGAAAGAAAGAAACTACAAGA AGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGACATTTTCTTTTTTTGTTGTTTTGGACTACATAT >8343_8343_5_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000395603_ABCB7_chrX_74334669_ENST00000339447_length(amino acids)=644AA_BP= MGKGNSGQFLDAAKALQVWPLIEKRTCWHGHAGGGLHTDPKEGAMNIVVPFMFKYAVDSLNQMSGNMLNLSDAPNTVATMATAVLIGYGV SRAGAAFFNEVRNAVFGKVAQNSIRRIAKNVFLHLHNLDLGFHLSRQTGALSKAIDRGTRGISFVLSALVFNLLPIMFEVMLVSGVLYYK CGAQFALVTLGTLGTYTAFTVAVTRWRTRFRIEMNKADNDAGNAAIDSLLNYETVKYFNNERYEAQRYDGFLKTYETASLKSTSTLAMLN FGQSAIFSVGLTAIMVLASQGIVAGTLTVGDLVMVNGLLFQLSLPLNFLGTVYRETRQALIDMNTLFTLLKVDTQIKDKVMASPLQITPQ TATVAFDNVHFEYIEGQKVLSGISFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLF HNTIYYNLLYGNISASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLKLSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETIL GAMKDVVKHRTSIFIAHRLSTVVDADEIIVLDQGKVAERGTHHGLLANPHSIYSEMWHTQSSRVQNHDNPKWEAKKENISKEEERKKLQE -------------------------------------------------------------- >8343_8343_6_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000395603_ABCB7_chrX_74334669_ENST00000373394_length(transcript)=2412nt_BP=235nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAG ATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGG TCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTATGT GTGGCCCAAAGACAGGCCAGATCTACGAGCTAGAGTTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGTTCC CTTCATGTTTAAATATGCTGTAGACAGCCTCAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCAT GGCAACAGCAGTTCTGATTGGCTATGGTGTATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGC CCAGAATTCAATCCGAAGAATAGCCAAAAATGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGC TTTATCTAAGGCTATTGACAGAGGAACAAGGGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGT GATGCTTGTCAGTGGTGTTTTGTATTACAAATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCAC AGTTGCAGTCACACGGTGGAGAACTAGATTTAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCT GAATTATGAAACTGTGAAGTATTTTAATAATGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATT GAAAAGTACCTCTACTCTGGCTATGCTGAACTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCA GGGAATTGTGGCAGGTACCCTTACTGTTGGAGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGG AACTGTATATAGAGAGACTAGACAAGCACTCATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGT GATGGCATCTCCCCTTCAGATCACACCACAGACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCT TAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATT ATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGT GGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGT GTATGCAGTGGCAAAATTAGCTGGACTTCATGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAA GCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATC GTTAGATTCGATTACTGAAGAGACTATTCTTGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTC AACAGTGGTTGATGCAGATGAAATCATTGTCTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCA TAGTATCTATTCAGAAATGTGGCATACACAGAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATC CAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGACAT >8343_8343_6_ATRX-ABCB7_ATRX_chrX_77041468_ENST00000395603_ABCB7_chrX_74334669_ENST00000373394_length(amino acids)=684AA_BP= MGKGNSGQFLDAAKALQVWPLIEKRTCWHGHAGGGLHTDPKEGLKDVDTRKIIKAMLSYVWPKDRPDLRARVAISLGFLGGAKAMNIVVP FMFKYAVDSLNQMSGNMLNLSDAPNTVATMATAVLIGYGVSRAGAAFFNEVRNAVFGKVAQNSIRRIAKNVFLHLHNLDLGFHLSRQTGA LSKAIDRGTRGISFVLSALVFNLLPIMFEVMLVSGVLYYKCGAQFALVTLGTLGTYTAFTVAVTRWRTRFRIEMNKADNDAGNAAIDSLL NYETVKYFNNERYEAQRYDGFLKTYETASLKSTSTLAMLNFGQSAIFSVGLTAIMVLASQGIVAGTLTVGDLVMVNGLLFQLSLPLNFLG TVYRETRQALIDMNTLFTLLKVDTQIKDKVMASPLQITPQTATVAFDNVHFEYIEGQKVLSGISFEVPAGKKVAIVGGSGSGKSTIVRLL FRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYGNISASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLK LSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMKDVVKHRTSIFIAHRLSTVVDADEIIVLDQGKVAERGTHHGLLANPH -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ATRX-ABCB7 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1189_1326 | 6.666666666666667 | 2493.0 | DAXX |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1189_1326 | 6.666666666666667 | 2455.0 | DAXX |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 2010_2280 | 6.666666666666667 | 2493.0 | MECP2 |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 2010_2280 | 6.666666666666667 | 2455.0 | MECP2 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ATRX-ABCB7 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ATRX-ABCB7 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ATRX | C0796003 | Juberg-Marsidi syndrome | 17 | CLINGEN;CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Hgene | ATRX | C1845055 | ALPHA-THALASSEMIA/MENTAL RETARDATION SYNDROME, NONDELETION TYPE, X-LINKED | 16 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | ATRX | C0017638 | Glioma | 2 | CTD_human |
Hgene | ATRX | C0027819 | Neuroblastoma | 2 | CTD_human |
Hgene | ATRX | C0259783 | mixed gliomas | 2 | CTD_human |
Hgene | ATRX | C0555198 | Malignant Glioma | 2 | CTD_human |
Hgene | ATRX | C0010417 | Cryptorchidism | 1 | CTD_human |
Hgene | ATRX | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human |
Hgene | ATRX | C0018273 | Growth Disorders | 1 | CTD_human |
Hgene | ATRX | C0030297 | Pancreatic Neoplasm | 1 | CTD_human |
Hgene | ATRX | C0030846 | Penile Diseases | 1 | CTD_human |
Hgene | ATRX | C0039978 | Thoracic Diseases | 1 | CTD_human |
Hgene | ATRX | C0206754 | Neuroendocrine Tumors | 1 | CTD_human |
Hgene | ATRX | C0346647 | Malignant neoplasm of pancreas | 1 | CTD_human |
Hgene | ATRX | C0376634 | Craniofacial Abnormalities | 1 | CTD_human |
Hgene | ATRX | C0431663 | Bilateral Cryptorchidism | 1 | CTD_human |
Hgene | ATRX | C0431664 | Unilateral Cryptorchidism | 1 | CTD_human |
Hgene | ATRX | C0585216 | Alpha-Thalassemia Myelodysplasia Syndrome | 1 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
Hgene | ATRX | C0796159 | Mental retardation Smith Fineman Myers type | 1 | ORPHANET |
Hgene | ATRX | C1136249 | Mental Retardation, X-Linked | 1 | CTD_human |
Hgene | ATRX | C1563730 | Abdominal Cryptorchidism | 1 | CTD_human |
Hgene | ATRX | C1563731 | Inguinal Cryptorchidism | 1 | CTD_human |
Hgene | ATRX | C2713368 | Hematopoetic Myelodysplasia | 1 | CTD_human |
Hgene | ATRX | C3463824 | MYELODYSPLASTIC SYNDROME | 1 | CTD_human |
Tgene | C1845028 | ANEMIA, SIDEROBLASTIC, AND SPINOCEREBELLAR ATAXIA | 6 | CTD_human;GENOMICS_ENGLAND;UNIPROT | |
Tgene | C0002896 | Sideroblastic anemia | 2 | CTD_human | |
Tgene | C0004134 | Ataxia | 1 | CTD_human | |
Tgene | C0240991 | Ataxia, Sensory | 1 | CTD_human | |
Tgene | C0278161 | Ataxia, Motor | 1 | CTD_human | |
Tgene | C0427190 | Ataxia, Truncal | 1 | CTD_human | |
Tgene | C0520966 | Abnormal coordination | 1 | CTD_human | |
Tgene | C0750937 | Ataxia, Appendicular | 1 | CTD_human | |
Tgene | C0750940 | Tremor, Rubral | 1 | CTD_human |