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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:BCOR-RARA (FusionGDB2 ID:HG54880TG5914) |
Fusion Gene Summary for BCOR-RARA |
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Fusion gene information | Fusion gene name: BCOR-RARA | Fusion gene ID: hg54880tg5914 | Hgene | Tgene | Gene symbol | BCOR | RARA | Gene ID | 54880 | 5914 |
Gene name | BCL6 corepressor | retinoic acid receptor alpha | |
Synonyms | ANOP2|MAA2|MCOPS2 | NR1B1|RAR | |
Cytomap | ('BCOR')('RARA') Xp11.4 | 17q21.2 | |
Type of gene | protein-coding | protein-coding | |
Description | BCL-6 corepressorBCL-6 coreceptorBCL-6 interacting corepressorBCL6 interacting corepressor | retinoic acid receptor alphaRAR-alphanuclear receptor subfamily 1 group B member 1nucleophosmin-retinoic acid receptor alpha fusion protein NPM-RAR long formretinoic acid nuclear receptor alpha variant 1retinoic acid nuclear receptor alpha variant 2 | |
Modification date | 20200328 | 20200327 | |
UniProtAcc | Q6W2J9 | P10276 | |
Ensembl transtripts involved in fusion gene | ENST00000342274, ENST00000378444, ENST00000378455, ENST00000378463, ENST00000397354, | ||
Fusion gene scores | * DoF score | 11 X 15 X 7=1155 | 29 X 39 X 17=19227 |
# samples | 12 | 55 | |
** MAII score | log2(12/1155*10)=-3.2667865406949 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(55/19227*10)=-5.12755824682814 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: BCOR [Title/Abstract] AND RARA [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | BCOR(39937182)-RARA(38504566), # samples:1 BCOR(39914621)-RARA(38504566), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | BCOR-RARA seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. BCOR-RARA seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. BCOR-RARA seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. BCOR-RARA seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. BCOR-RARA seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF. BCOR-RARA seems lost the major protein functional domain in Hgene partner, which is a epigenetic factor due to the frame-shifted ORF. BCOR-RARA seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. BCOR-RARA seems lost the major protein functional domain in Tgene partner, which is a CGC due to the frame-shifted ORF. BCOR-RARA seems lost the major protein functional domain in Tgene partner, which is a epigenetic factor due to the frame-shifted ORF. BCOR-RARA seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. BCOR-RARA seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | BCOR | GO:0035518 | histone H2A monoubiquitination | 16943429 |
Hgene | BCOR | GO:0045892 | negative regulation of transcription, DNA-templated | 10898795 |
Tgene | RARA | GO:0007165 | signal transduction | 2825025 |
Tgene | RARA | GO:0030853 | negative regulation of granulocyte differentiation | 19917671 |
Tgene | RARA | GO:0032689 | negative regulation of interferon-gamma production | 18416830 |
Tgene | RARA | GO:0032720 | negative regulation of tumor necrosis factor production | 18416830 |
Tgene | RARA | GO:0032736 | positive regulation of interleukin-13 production | 18416830 |
Tgene | RARA | GO:0032753 | positive regulation of interleukin-4 production | 18416830 |
Tgene | RARA | GO:0032754 | positive regulation of interleukin-5 production | 18416830 |
Tgene | RARA | GO:0045630 | positive regulation of T-helper 2 cell differentiation | 18416830 |
Tgene | RARA | GO:0045892 | negative regulation of transcription, DNA-templated | 20080953 |
Tgene | RARA | GO:0045893 | positive regulation of transcription, DNA-templated | 18845237|19850744|20080953 |
Tgene | RARA | GO:0045944 | positive regulation of transcription by RNA polymerase II | 19850744|21131358 |
Tgene | RARA | GO:0071300 | cellular response to retinoic acid | 19917671 |
Tgene | RARA | GO:0071391 | cellular response to estrogen stimulus | 20080953 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | acute myeloid leukemia | HM597846 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
ChimerKB4 | . | . | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
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Fusion Gene ORF analysis for BCOR-RARA |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000342274 | ENST00000254066 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-3CDS | ENST00000342274 | ENST00000394089 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-3CDS | ENST00000378444 | ENST00000254066 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-3CDS | ENST00000378444 | ENST00000394089 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-3CDS | ENST00000378455 | ENST00000254066 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-3CDS | ENST00000378455 | ENST00000394089 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-3CDS | ENST00000378463 | ENST00000254066 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-3CDS | ENST00000378463 | ENST00000394089 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-3CDS | ENST00000397354 | ENST00000254066 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-3CDS | ENST00000397354 | ENST00000394089 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000342274 | ENST00000254066 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000342274 | ENST00000394081 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000342274 | ENST00000394081 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000342274 | ENST00000394086 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000342274 | ENST00000394086 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000342274 | ENST00000394089 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000342274 | ENST00000420042 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000342274 | ENST00000420042 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000342274 | ENST00000425707 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000342274 | ENST00000425707 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378444 | ENST00000254066 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378444 | ENST00000394081 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378444 | ENST00000394081 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378444 | ENST00000394086 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378444 | ENST00000394086 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378444 | ENST00000394089 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378444 | ENST00000420042 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378444 | ENST00000420042 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378444 | ENST00000425707 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378444 | ENST00000425707 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378455 | ENST00000254066 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378455 | ENST00000394081 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378455 | ENST00000394081 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378455 | ENST00000394086 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378455 | ENST00000394086 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378455 | ENST00000394089 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378455 | ENST00000420042 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378455 | ENST00000420042 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378455 | ENST00000425707 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378455 | ENST00000425707 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378463 | ENST00000254066 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378463 | ENST00000394081 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378463 | ENST00000394081 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378463 | ENST00000394086 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378463 | ENST00000394086 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378463 | ENST00000394089 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378463 | ENST00000420042 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378463 | ENST00000420042 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000378463 | ENST00000425707 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000378463 | ENST00000425707 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000397354 | ENST00000254066 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000397354 | ENST00000394081 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000397354 | ENST00000394081 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000397354 | ENST00000394086 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000397354 | ENST00000394086 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000397354 | ENST00000394089 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000397354 | ENST00000420042 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000397354 | ENST00000420042 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
intron-intron | ENST00000397354 | ENST00000425707 | BCOR | chrX | 39937182 | RARA | chr17 | 38504566 | ||
intron-intron | ENST00000397354 | ENST00000425707 | BCOR | chrX | 39914766 | - | RARA | chr17 | 39914766 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000397354 | ENST00000254066 | BCOR | chrX | 39914621 | - | RARA | chr17 | 38504566 | + | 0.003821113 | 0.99617887 |
ENST00000397354 | ENST00000394089 | BCOR | chrX | 39914621 | - | RARA | chr17 | 38504566 | + | 0.0044187 | 0.9955813 |
ENST00000378444 | ENST00000254066 | BCOR | chrX | 39914621 | - | RARA | chr17 | 38504566 | + | 0.002580281 | 0.9974197 |
ENST00000378444 | ENST00000394089 | BCOR | chrX | 39914621 | - | RARA | chr17 | 38504566 | + | 0.003005791 | 0.99699426 |
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Fusion Genomic Features for BCOR-RARA |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
BCOR | chrX | 39914620 | - | RARA | chr17 | 38504567 | + | 1.11E-05 | 0.9999889 |
BCOR | chrX | 39914620 | - | RARA | chr17 | 38504567 | + | 1.11E-05 | 0.9999889 |
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Fusion Protein Features for BCOR-RARA |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chrX:39937182/chr17:38504566) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
BCOR | RARA |
FUNCTION: Transcriptional corepressor. May specifically inhibit gene expression when recruited to promoter regions by sequence-specific DNA-binding proteins such as BCL6 and MLLT3. This repression may be mediated at least in part by histone deacetylase activities which can associate with this corepressor. Involved in the repression of TFAP2A; impairs binding of BCL6 and KDM2B to TFAP2A promoter regions. Via repression of TFAP2A acts as a negative regulator of osteo-dentiogenic capacity in adult stem cells; the function implies inhibition of methylation on histone H3 'Lys-4' (H3K4me3) and 'Lys-36' (H3K36me2). {ECO:0000269|PubMed:10898795, ECO:0000269|PubMed:15004558, ECO:0000269|PubMed:18280243, ECO:0000269|PubMed:19578371, ECO:0000269|PubMed:23911289}. | FUNCTION: Receptor for retinoic acid (PubMed:19850744, PubMed:16417524, PubMed:20215566). Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes (PubMed:28167758). The RXR/RAR heterodimers bind to the retinoic acid response elements (RARE) composed of tandem 5'-AGGTCA-3' sites known as DR1-DR5 (PubMed:28167758, PubMed:19398580). In the absence of ligand, the RXR-RAR heterodimers associate with a multiprotein complex containing transcription corepressors that induce histone deacetylation, chromatin condensation and transcriptional suppression (PubMed:16417524). On ligand binding, the corepressors dissociate from the receptors and associate with the coactivators leading to transcriptional activation (PubMed:9267036, PubMed:19850744, PubMed:20215566). Formation of a complex with histone deacetylases might lead to inhibition of RARE DNA element binding and to transcriptional repression (PubMed:28167758). Transcriptional activation and RARE DNA element binding might be supported by the transcription factor KLF2 (PubMed:28167758). RARA plays an essential role in the regulation of retinoic acid-induced germ cell development during spermatogenesis (By similarity). Has a role in the survival of early spermatocytes at the beginning prophase of meiosis (By similarity). In Sertoli cells, may promote the survival and development of early meiotic prophase spermatocytes (By similarity). In concert with RARG, required for skeletal growth, matrix homeostasis and growth plate function (By similarity). Together with RXRA, positively regulates microRNA-10a expression, thereby inhibiting the GATA6/VCAM1 signaling response to pulsatile shear stress in vascular endothelial cells (PubMed:28167758). In association with HDAC3, HDAC5 and HDAC7 corepressors, plays a role in the repression of microRNA-10a and thereby promotes the inflammatory response (PubMed:28167758). {ECO:0000250|UniProtKB:P11416, ECO:0000269|PubMed:16417524, ECO:0000269|PubMed:19398580, ECO:0000269|PubMed:19850744, ECO:0000269|PubMed:20215566, ECO:0000269|PubMed:28167758, ECO:0000269|PubMed:9267036}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000342274 | - | 12 | 15 | 634_711 | 1546 | 1722.0 | Compositional bias | Note=Pro-rich |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378444 | - | 12 | 15 | 634_711 | 1580 | 1756.0 | Compositional bias | Note=Pro-rich |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378455 | - | 11 | 14 | 634_711 | 1528 | 1704.0 | Compositional bias | Note=Pro-rich |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000397354 | - | 12 | 15 | 634_711 | 1546 | 1722.0 | Compositional bias | Note=Pro-rich |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000342274 | - | 12 | 15 | 1462_1495 | 1546 | 1722.0 | Repeat | Note=ANK 1 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000342274 | - | 12 | 15 | 1496_1525 | 1546 | 1722.0 | Repeat | Note=ANK 2 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378444 | - | 12 | 15 | 1462_1495 | 1580 | 1756.0 | Repeat | Note=ANK 1 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378444 | - | 12 | 15 | 1496_1525 | 1580 | 1756.0 | Repeat | Note=ANK 2 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378444 | - | 12 | 15 | 1529_1558 | 1580 | 1756.0 | Repeat | Note=ANK 3 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378455 | - | 11 | 14 | 1462_1495 | 1528 | 1704.0 | Repeat | Note=ANK 1 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378455 | - | 11 | 14 | 1496_1525 | 1528 | 1704.0 | Repeat | Note=ANK 2 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000397354 | - | 12 | 15 | 1462_1495 | 1546 | 1722.0 | Repeat | Note=ANK 1 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000397354 | - | 12 | 15 | 1496_1525 | 1546 | 1722.0 | Repeat | Note=ANK 2 |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000254066 | 1 | 9 | 88_153 | 59 | 463.0 | DNA binding | Nuclear receptor | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394081 | 0 | 8 | 88_153 | 54 | 458.0 | DNA binding | Nuclear receptor | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394089 | 1 | 9 | 88_153 | 59 | 463.0 | DNA binding | Nuclear receptor | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000425707 | 0 | 7 | 88_153 | 0 | 366.0 | DNA binding | Nuclear receptor | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000254066 | 1 | 9 | 183_417 | 59 | 463.0 | Domain | NR LBD | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394081 | 0 | 8 | 183_417 | 54 | 458.0 | Domain | NR LBD | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394089 | 1 | 9 | 183_417 | 59 | 463.0 | Domain | NR LBD | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000425707 | 0 | 7 | 183_417 | 0 | 366.0 | Domain | NR LBD | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000254066 | 1 | 9 | 408_416 | 59 | 463.0 | Motif | 9aaTAD | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394081 | 0 | 8 | 408_416 | 54 | 458.0 | Motif | 9aaTAD | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394089 | 1 | 9 | 408_416 | 59 | 463.0 | Motif | 9aaTAD | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000425707 | 0 | 7 | 408_416 | 0 | 366.0 | Motif | 9aaTAD | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000254066 | 1 | 9 | 154_182 | 59 | 463.0 | Region | Note=Hinge | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000254066 | 1 | 9 | 404_419 | 59 | 463.0 | Region | Note=Required for binding corepressor NCOR1 | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394081 | 0 | 8 | 154_182 | 54 | 458.0 | Region | Note=Hinge | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394081 | 0 | 8 | 404_419 | 54 | 458.0 | Region | Note=Required for binding corepressor NCOR1 | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394089 | 1 | 9 | 154_182 | 59 | 463.0 | Region | Note=Hinge | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394089 | 1 | 9 | 404_419 | 59 | 463.0 | Region | Note=Required for binding corepressor NCOR1 | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000425707 | 0 | 7 | 154_182 | 0 | 366.0 | Region | Note=Hinge | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000425707 | 0 | 7 | 1_87 | 0 | 366.0 | Region | Note=Modulating | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000425707 | 0 | 7 | 404_419 | 0 | 366.0 | Region | Note=Required for binding corepressor NCOR1 | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000254066 | 1 | 9 | 124_148 | 59 | 463.0 | Zinc finger | NR C4-type | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000254066 | 1 | 9 | 88_108 | 59 | 463.0 | Zinc finger | NR C4-type | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394081 | 0 | 8 | 124_148 | 54 | 458.0 | Zinc finger | NR C4-type | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394081 | 0 | 8 | 88_108 | 54 | 458.0 | Zinc finger | NR C4-type | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394089 | 1 | 9 | 124_148 | 59 | 463.0 | Zinc finger | NR C4-type | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394089 | 1 | 9 | 88_108 | 59 | 463.0 | Zinc finger | NR C4-type | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000425707 | 0 | 7 | 124_148 | 0 | 366.0 | Zinc finger | NR C4-type | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000425707 | 0 | 7 | 88_108 | 0 | 366.0 | Zinc finger | NR C4-type |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000342274 | - | 12 | 15 | 1625_1631 | 1546 | 1722.0 | Compositional bias | Note=Poly-Asp |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378444 | - | 12 | 15 | 1625_1631 | 1580 | 1756.0 | Compositional bias | Note=Poly-Asp |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378455 | - | 11 | 14 | 1625_1631 | 1528 | 1704.0 | Compositional bias | Note=Poly-Asp |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000397354 | - | 12 | 15 | 1625_1631 | 1546 | 1722.0 | Compositional bias | Note=Poly-Asp |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000342274 | - | 12 | 15 | 1529_1558 | 1546 | 1722.0 | Repeat | Note=ANK 3 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378455 | - | 11 | 14 | 1529_1558 | 1528 | 1704.0 | Repeat | Note=ANK 3 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000397354 | - | 12 | 15 | 1529_1558 | 1546 | 1722.0 | Repeat | Note=ANK 3 |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000254066 | 1 | 9 | 1_87 | 59 | 463.0 | Region | Note=Modulating | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394081 | 0 | 8 | 1_87 | 54 | 458.0 | Region | Note=Modulating | |
Tgene | RARA | chrX:39914621 | chr17:38504566 | ENST00000394089 | 1 | 9 | 1_87 | 59 | 463.0 | Region | Note=Modulating |
Top |
Fusion Gene Sequence for BCOR-RARA |
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>9499_9499_1_BCOR-RARA_BCOR_chrX_39914621_ENST00000378444_RARA_chr17_38504566_ENST00000254066_length(transcript)=6751nt_BP=4970nt GCTCGCCGCGCTTCTCCGGCCCGGCTCCTTCTCCGCTCGTTAACGTCGCCAACCCCCCCCACCCCTCATATCTCTCTCCACCCACCCAAC CGCCCCCCGCTCCTTCTCGCCGCCTCGAGTCCGCTTGGGGGAAAACTTCAAAGAGCCGGATCGCAGGCTCCCTGCCTACTCCCCCACCGG GGATTTCAGACTAGACGCTTGAAGCAAAGCTGCCATCCCAGAAGACGACATGCTCTCAGCAACCCCCCTGTATGGGAACGTTCACAGCTG GATGAACAGCGAGAGGGTCCGCATGTGTGGGGCGAGCGAAGACAGGAAAATCCTTGTAAATGATGGTGACGCTTCAAAAGCCAGACTGGA ACTGAGGGAAGAGAATCCCTTGAACCACAACGTGGTGGATGCGAGCACGGCCCATAGGATCGATGGCCTGGCAGCACTGAGCATGGACCG CACTGGCCTGATCCGGGAAGGGCTGCGGGTCCCGGGAAACATCGTCTATTCTAGCTTGTGTGGACTGGGCTCAGAGAAAGGTCGGGAGGC TGCCACAAGCACTCTAGGTGGCCTTGGGTTTTCTTCGGAAAGAAATCCAGAGATGCAGTTCAAACCGAATACACCCGAGACAGTGGAGGC TTCTGCCGTCTCTGGAAAACCCCCAAATGGCTTCAGTGCTATATACAAAACACCGCCTGGAATACAAAAAAGTGCTGTAGCCACAGCAGA AGCGCTGGGCTTGGACAGGCCTGCCAGCGACAAACAGAGCCCTCTCAACATCAATGGTGCTAGTTATCTGCGGCTGCCCTGGGTCAATCC TTACATGGAGGGTGCCACGCCAGCCATCTACCCTTTCCTCGACTCGCCAAATAAGTATTCACTGAACATGTACAAGGCCTTGCTACCTCA GCAGTCCTACAGCTTGGCCCAGCCGCTGTATTCTCCAGTCTGCACCAATGGGGAGCGCTTTCTCTACCTGCCGCCACCTCACTACGTCGG TCCCCACATCCCATCGTCCTTGGCATCACCCATGAGGCTCTCGACACCTTCGGCCTCCCCAGCCATCCCGCCTCTCGTCCATTGCGCAGA CAAAAGCCTCCCGTGGAAGATGGGCGTCAGCCCTGGGAATCCTGTTGATTCCCACGCCTATCCTCACATCCAGAACAGTAAGCAGCCCAG GGTTCCCTCTGCCAAGGCGGTCACCAGTGGCCTGCCGGGGGACACAGCTCTCCTGTTGCCCCCCTCGCCTCGGCCGTCACCCCGAGTCCA CCTTCCCACCCAGCCTGCTGCAGACACCTACTCGGAGTTCCACAAGCACTATGCCAGGATCTCCACCTCTCCTTCAGTTGCCCTGTCAAA GCCATACATGACAGTTAGCAGCGAGTTCCCCGCGGCCAGGCTCTCCAATGGCAAGTATCCCAAGGCTCCGGAAGGGGGCGAAGGTGCCCA GCCAGTGCCCGGGCATGCCCGGAAGACAGCGGTTCAAGACAGAAAAGATGGCAGCTCACCTCCTCTGTTGGAGAAGCAGACCGTTACCAA AGACGTCACAGATAAGCCACTAGACTTGTCTTCTAAAGTGGTGGATGTAGATGCTTCCAAAGCTGACCACATGAAAAAGATGGCTCCCAC GGTCCTGGTTCACAGCAGGGCTGGAAGTGGCTTAGTGCTCTCCGGAAGTGAGATTCCGAAAGAAACACTATCTCCTCCAGGAAATGGTTG TGCTATCTATAGATCTGAAATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCCGGGCCAAGTCCTAACGAAGAGAACAATGGCAAAAG CATGTCGCTGAAAAACAAGGCATTGGACTGGGCGATACCACAGCAGCGGAGTTCATCATGCCCGCGCATGGGCGGCACCGATGCTGTCAT CACTAACGTTTCAGGGTCAGTGTCGAGTGCAGGCCGCCCAGCCTCCGCATCACCCGCCCCCAATGCCAATGCAGATGGCACCAAAACCAG CAGGAGCTCTGTAGAAACCACACCATCCGTTATTCAGCACGTGGGCCAGCCCCCGGCCACTCCTGCCAAGCACAGTAGCAGCACCAGCAG CAAGGGCGCCAAAGCCAGCAACCCAGAACCGAGTTTCAAAGCAAACGAGAACGGCCTTCCACCAAGCTCTATATTTCTGTCTCCAAATGA GGCATTCAGGTCCCCACCAATTCCCTACCCCAGGAGTTACCTCCCTTACCCAGCCCCTGAGGGCATTGCTGTAAGTCCCCTCTCCTTACA TGGCAAAGGACCTGTCTACCCTCACCCAGTTTTGTTACCCAATGGCAGTCTGTTTCCTGGGCACCTTGCCCCAAAGCCTGGGCTGCCCTA TGGGCTTCCCACCGGCCGTCCAGAGTTTGTGACCTACCAAGATGCCCTGGGGTTGGGCATGGTGCATCCCATGTTGATACCACACACGCC CATAGAGATTACTAAAGAGGAGAAACCAGAGAGGAGATCCCGGTCCCATGAGAGAGCCCGTTACGAGGACCCAACCCTCCGGAATCGGTT TTCCGAGATTTTGGAAACTAGCAGCACCAAGTTACATCCAGATGTCCCCACCGACAAGAACCTAAAGCCGAACCCCAACTGGAATCAAGG GAAGACTGTTGTCAAAAGCGACAAGCTTGTCTACGTAGACCTTCTCCGAGAAGAACCAGATGCTAAAACTGACACAAACGTGTCCAAACC CAGCTTTGCAGCAGAGAGTGTTGGCCAGAGCGCTGAGCCCCCCAAGCCCTCAGTTGAGCCGGCCCTGCAGCAGCACCGTGATTTCATCGC CCTGAGAGAGGAGTTGGGGCGCATCAGTGACTTCCACGAAACTTATACTTTCAAACAGCCAGTCTTCACCGTAAGCAAGGACAGTGTTCT GGCAGGTACCAACAAAGAGAACCTAGGGTTGCCAGTCTCGACTCCATTCCTGGAGCCACCTCTGGGGAGCGATGGCCCTGCTGTAACTTT TGGTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGGGCAGTGCCCCACCAAGTGTGGATGTGACCCCCACCTATACCAAAGATGGAGC TGATGAGGCTGAATCAAATGATGGCAAAGTTCTGAAACCGAAGCCATCTAAGCTGGCAAAGAGAATCGCCAACTCAGCGGGTTACGTGGG TGACCGATTCAAATGTGTCACTACCGAACTGTATGCAGATTCCAGTCAGCTCAGCCGGGAGCAACGGGCATTGCAGATGGAAGGATTACA AGAGGACAGTATTTTATGTCTACCCGCTGCTTACTGTGAGCGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAAGAAAGAGAAGGTGG CCACCCAGCAACCAAAGACTCCGAGATGTGCAAATTCAGCCCAGCCGACTGGGAAAGGTTGAAAGGAAATCAGGACAAAAAGCCAAAGTC GGTCACCCTGGAGGAGGCCATTGCAGAACAGAACGAAAGTGAGAGATGCGAGTATAGTGTTGGAAACAAGCACCGTGATCCCTTTGAAGC CCCAGAGGACAAAGATCTTCCTGTGGAGAAGTACTTTGTGGAGAGGCAGCCTGTGAGCGAGCCTCCCGCAGACCAGGTGGCCTCGGACAT GCCTCACAGCCCCACCCTCCGGGTGGACAGGAAACGCAAAGTCTCAGGTGACAGCAGCCACACTGAGACCACTGCGGAGGAGGTGCCAGA GGACCCTCTGCTGAAAGCCAAACGCCGACGAGTCTCTAAAGATGACTGGCCTGAGAGGGAAATGACAAACAGTTCCTCTAACCACTTAGA AGACCCACATTATAGTGAGCTGACCAACCTGAAGGTGTGCATTGAATTAACAGGGCTCCATCCTAAAAAACAACGCCACTTGCTGCACCT TAGAGAACGATGGGAGCAGCAGGTGTCGGCAGCAGATGGCAAACCTGGCCGGCAAAGCAGGAAGGAAGTGACCCAGGCCACTCAGCCTGA GGCCATTCCTCAGGGGACTAACATCACTGAAGAGAAACCTGGCAGGAAAAGGGCAGAGGCCAAAGGCAACAGAAGCTGGTCGGAAGAGTC TCTTAAACCCAGTGACAATGAACAAGGCTTGCCTGTGTTCTCCGGCTCTCCGCCCATGAAGAGTCTTTCATCCACCAGTGCAGGCGGCAA AAAGCAGGCTCAGCCAAGCTGCGCACCAGCCTCCAGGCCGCCTGCCAAACAGCAGAAAATTAAAGAAAACCAGAAGACAGATGTGCTGTG TGCAGACGAAGAAGAGGATTGCCAGGCTGCCTCCCTGCTGCAGAAATACACCGACAACAGCGAGAAGCCATCCGGGAAGAGACTGTGCAA AACCAAACACTTGATCCCTCAGGAGTCCAGGCGGGGATTGCCACTGACAGGGGAATACTACGTGGAGAATGCCGATGGCAAGGTGACTGT CCGGAGATTCAGAAAGCGGCCGGAGCCCAGTTCGGACTATGATCTGTCACCAGCCAAGCAGGAGCCAAAGCCCTTCGACCGCTTGCAGCA ACTGCTACCAGCCTCCCAGTCCACACAGCTGCCATGCTCAAGTTCCCCTCAGGAGACCACCCAGTCTCGCCCTATGCCGCCGGAAGCACG GAGACTTATTGTCAATAAGAACGCTGGCGAGACCCTTCTGCAGCGGGCAGCCAGGCTTGGCTATGAGGAAGTGGTCCTGTACTGCTTAGA GAACAAGATTTGTGATGTAAATCATCGGGACAACGCAGGTTACTGCGCCCTGCATGAAGCTTGTGCTAGGGGCTGGCTCAACATTGTGCG ACACCTCCTTGAATATGGCGCTGATGTCAACTGTAGTGCCCAGGATGGAACCAGGCCTCTGCACGATGCTGTTGAGAACGATCACTTGGA AATTGTCCGACTACTTCTCTCTTATGGTGCTGACCCCACCTTGGCTACGTACTCAGGTAGAACCATCATGAAAATGACCCACAGTGAACT TATGGAAAAGTTCTTAACAGCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCACCCCCTCTACCCCG CATCTACAAGCCTTGCTTTGTCTGTCAGGACAAGTCCTCAGGCTACCACTATGGGGTCAGCGCCTGTGAGGGCTGCAAGGGCTTCTTCCG CCGCAGCATCCAGAAGAACATGGTGTACACGTGTCACCGGGACAAGAACTGCATCATCAACAAGGTGACCCGGAACCGCTGCCAGTACTG CCGACTGCAGAAGTGCTTTGAAGTGGGCATGTCCAAGGAGTCTGTGAGAAACGACCGAAACAAGAAGAAGAAGGAGGTGCCCAAGCCCGA GTGCTCTGAGAGCTACACGCTGACGCCGGAGGTGGGGGAGCTCATTGAGAAGGTGCGCAAAGCGCACCAGGAAACCTTCCCTGCCCTCTG CCAGCTGGGCAAATACACTACGAACAACAGCTCAGAACAACGTGTCTCTCTGGACATTGACCTCTGGGACAAGTTCAGTGAACTCTCCAC CAAGTGCATCATTAAGACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCACCACCCTCACCATCGCCGACCAGATCACCCTCCTCAAGGC TGCCTGCCTGGACATCCTGATCCTGCGGATCTGCACGCGGTACACGCCCGAGCAGGACACCATGACCTTCTCGGACGGGCTGACCCTGAA CCGGACCCAGATGCACAACGCTGGCTTCGGCCCCCTCACCGACCTGGTCTTTGCCTTCGCCAACCAGCTGCTGCCCCTGGAGATGGATGA TGCGGAGACGGGGCTGCTCAGCGCCATCTGCCTCATCTGCGGAGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGA GCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGA CCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAAT GTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAG CTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCG CCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGG ACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGG CTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGGGCCTCGTGTTCATCAAGACA CCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCA GCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGGGGCGGGGGGTTCCCCCTGTACATACCCTGCCAT ACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTTTGATTTTTTTAATAAGAATTTTCATTTTAAGCAC >9499_9499_1_BCOR-RARA_BCOR_chrX_39914621_ENST00000378444_RARA_chr17_38504566_ENST00000254066_length(amino acids)=1983AA_BP=1580 MLSATPLYGNVHSWMNSERVRMCGASEDRKILVNDGDASKARLELREENPLNHNVVDASTAHRIDGLAALSMDRTGLIREGLRVPGNIVY SSLCGLGSEKGREAATSTLGGLGFSSERNPEMQFKPNTPETVEASAVSGKPPNGFSAIYKTPPGIQKSAVATAEALGLDRPASDKQSPLN INGASYLRLPWVNPYMEGATPAIYPFLDSPNKYSLNMYKALLPQQSYSLAQPLYSPVCTNGERFLYLPPPHYVGPHIPSSLASPMRLSTP SASPAIPPLVHCADKSLPWKMGVSPGNPVDSHAYPHIQNSKQPRVPSAKAVTSGLPGDTALLLPPSPRPSPRVHLPTQPAADTYSEFHKH YARISTSPSVALSKPYMTVSSEFPAARLSNGKYPKAPEGGEGAQPVPGHARKTAVQDRKDGSSPPLLEKQTVTKDVTDKPLDLSSKVVDV DASKADHMKKMAPTVLVHSRAGSGLVLSGSEIPKETLSPPGNGCAIYRSEIISTAPSSWVVPGPSPNEENNGKSMSLKNKALDWAIPQQR SSSCPRMGGTDAVITNVSGSVSSAGRPASASPAPNANADGTKTSRSSVETTPSVIQHVGQPPATPAKHSSSTSSKGAKASNPEPSFKANE NGLPPSSIFLSPNEAFRSPPIPYPRSYLPYPAPEGIAVSPLSLHGKGPVYPHPVLLPNGSLFPGHLAPKPGLPYGLPTGRPEFVTYQDAL GLGMVHPMLIPHTPIEITKEEKPERRSRSHERARYEDPTLRNRFSEILETSSTKLHPDVPTDKNLKPNPNWNQGKTVVKSDKLVYVDLLR EEPDAKTDTNVSKPSFAAESVGQSAEPPKPSVEPALQQHRDFIALREELGRISDFHETYTFKQPVFTVSKDSVLAGTNKENLGLPVSTPF LEPPLGSDGPAVTFGKTQEDPKPFCVGSAPPSVDVTPTYTKDGADEAESNDGKVLKPKPSKLAKRIANSAGYVGDRFKCVTTELYADSSQ LSREQRALQMEGLQEDSILCLPAAYCERAMMRFSELEMKEREGGHPATKDSEMCKFSPADWERLKGNQDKKPKSVTLEEAIAEQNESERC EYSVGNKHRDPFEAPEDKDLPVEKYFVERQPVSEPPADQVASDMPHSPTLRVDRKRKVSGDSSHTETTAEEVPEDPLLKAKRRRVSKDDW PEREMTNSSSNHLEDPHYSELTNLKVCIELTGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRK RAEAKGNRSWSEESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKY TDNSEKPSGKRLCKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSP QETTQSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDG TRPLHDAVENDHLEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTAIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYH YGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEVPKPECSESYTLTPEVGELIE KVRKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTP EQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPS RPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPAT -------------------------------------------------------------- >9499_9499_2_BCOR-RARA_BCOR_chrX_39914621_ENST00000378444_RARA_chr17_38504566_ENST00000394089_length(transcript)=6286nt_BP=4970nt GCTCGCCGCGCTTCTCCGGCCCGGCTCCTTCTCCGCTCGTTAACGTCGCCAACCCCCCCCACCCCTCATATCTCTCTCCACCCACCCAAC CGCCCCCCGCTCCTTCTCGCCGCCTCGAGTCCGCTTGGGGGAAAACTTCAAAGAGCCGGATCGCAGGCTCCCTGCCTACTCCCCCACCGG GGATTTCAGACTAGACGCTTGAAGCAAAGCTGCCATCCCAGAAGACGACATGCTCTCAGCAACCCCCCTGTATGGGAACGTTCACAGCTG GATGAACAGCGAGAGGGTCCGCATGTGTGGGGCGAGCGAAGACAGGAAAATCCTTGTAAATGATGGTGACGCTTCAAAAGCCAGACTGGA ACTGAGGGAAGAGAATCCCTTGAACCACAACGTGGTGGATGCGAGCACGGCCCATAGGATCGATGGCCTGGCAGCACTGAGCATGGACCG CACTGGCCTGATCCGGGAAGGGCTGCGGGTCCCGGGAAACATCGTCTATTCTAGCTTGTGTGGACTGGGCTCAGAGAAAGGTCGGGAGGC TGCCACAAGCACTCTAGGTGGCCTTGGGTTTTCTTCGGAAAGAAATCCAGAGATGCAGTTCAAACCGAATACACCCGAGACAGTGGAGGC TTCTGCCGTCTCTGGAAAACCCCCAAATGGCTTCAGTGCTATATACAAAACACCGCCTGGAATACAAAAAAGTGCTGTAGCCACAGCAGA AGCGCTGGGCTTGGACAGGCCTGCCAGCGACAAACAGAGCCCTCTCAACATCAATGGTGCTAGTTATCTGCGGCTGCCCTGGGTCAATCC TTACATGGAGGGTGCCACGCCAGCCATCTACCCTTTCCTCGACTCGCCAAATAAGTATTCACTGAACATGTACAAGGCCTTGCTACCTCA GCAGTCCTACAGCTTGGCCCAGCCGCTGTATTCTCCAGTCTGCACCAATGGGGAGCGCTTTCTCTACCTGCCGCCACCTCACTACGTCGG TCCCCACATCCCATCGTCCTTGGCATCACCCATGAGGCTCTCGACACCTTCGGCCTCCCCAGCCATCCCGCCTCTCGTCCATTGCGCAGA CAAAAGCCTCCCGTGGAAGATGGGCGTCAGCCCTGGGAATCCTGTTGATTCCCACGCCTATCCTCACATCCAGAACAGTAAGCAGCCCAG GGTTCCCTCTGCCAAGGCGGTCACCAGTGGCCTGCCGGGGGACACAGCTCTCCTGTTGCCCCCCTCGCCTCGGCCGTCACCCCGAGTCCA CCTTCCCACCCAGCCTGCTGCAGACACCTACTCGGAGTTCCACAAGCACTATGCCAGGATCTCCACCTCTCCTTCAGTTGCCCTGTCAAA GCCATACATGACAGTTAGCAGCGAGTTCCCCGCGGCCAGGCTCTCCAATGGCAAGTATCCCAAGGCTCCGGAAGGGGGCGAAGGTGCCCA GCCAGTGCCCGGGCATGCCCGGAAGACAGCGGTTCAAGACAGAAAAGATGGCAGCTCACCTCCTCTGTTGGAGAAGCAGACCGTTACCAA AGACGTCACAGATAAGCCACTAGACTTGTCTTCTAAAGTGGTGGATGTAGATGCTTCCAAAGCTGACCACATGAAAAAGATGGCTCCCAC GGTCCTGGTTCACAGCAGGGCTGGAAGTGGCTTAGTGCTCTCCGGAAGTGAGATTCCGAAAGAAACACTATCTCCTCCAGGAAATGGTTG TGCTATCTATAGATCTGAAATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCCGGGCCAAGTCCTAACGAAGAGAACAATGGCAAAAG CATGTCGCTGAAAAACAAGGCATTGGACTGGGCGATACCACAGCAGCGGAGTTCATCATGCCCGCGCATGGGCGGCACCGATGCTGTCAT CACTAACGTTTCAGGGTCAGTGTCGAGTGCAGGCCGCCCAGCCTCCGCATCACCCGCCCCCAATGCCAATGCAGATGGCACCAAAACCAG CAGGAGCTCTGTAGAAACCACACCATCCGTTATTCAGCACGTGGGCCAGCCCCCGGCCACTCCTGCCAAGCACAGTAGCAGCACCAGCAG CAAGGGCGCCAAAGCCAGCAACCCAGAACCGAGTTTCAAAGCAAACGAGAACGGCCTTCCACCAAGCTCTATATTTCTGTCTCCAAATGA GGCATTCAGGTCCCCACCAATTCCCTACCCCAGGAGTTACCTCCCTTACCCAGCCCCTGAGGGCATTGCTGTAAGTCCCCTCTCCTTACA TGGCAAAGGACCTGTCTACCCTCACCCAGTTTTGTTACCCAATGGCAGTCTGTTTCCTGGGCACCTTGCCCCAAAGCCTGGGCTGCCCTA TGGGCTTCCCACCGGCCGTCCAGAGTTTGTGACCTACCAAGATGCCCTGGGGTTGGGCATGGTGCATCCCATGTTGATACCACACACGCC CATAGAGATTACTAAAGAGGAGAAACCAGAGAGGAGATCCCGGTCCCATGAGAGAGCCCGTTACGAGGACCCAACCCTCCGGAATCGGTT TTCCGAGATTTTGGAAACTAGCAGCACCAAGTTACATCCAGATGTCCCCACCGACAAGAACCTAAAGCCGAACCCCAACTGGAATCAAGG GAAGACTGTTGTCAAAAGCGACAAGCTTGTCTACGTAGACCTTCTCCGAGAAGAACCAGATGCTAAAACTGACACAAACGTGTCCAAACC CAGCTTTGCAGCAGAGAGTGTTGGCCAGAGCGCTGAGCCCCCCAAGCCCTCAGTTGAGCCGGCCCTGCAGCAGCACCGTGATTTCATCGC CCTGAGAGAGGAGTTGGGGCGCATCAGTGACTTCCACGAAACTTATACTTTCAAACAGCCAGTCTTCACCGTAAGCAAGGACAGTGTTCT GGCAGGTACCAACAAAGAGAACCTAGGGTTGCCAGTCTCGACTCCATTCCTGGAGCCACCTCTGGGGAGCGATGGCCCTGCTGTAACTTT TGGTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGGGCAGTGCCCCACCAAGTGTGGATGTGACCCCCACCTATACCAAAGATGGAGC TGATGAGGCTGAATCAAATGATGGCAAAGTTCTGAAACCGAAGCCATCTAAGCTGGCAAAGAGAATCGCCAACTCAGCGGGTTACGTGGG TGACCGATTCAAATGTGTCACTACCGAACTGTATGCAGATTCCAGTCAGCTCAGCCGGGAGCAACGGGCATTGCAGATGGAAGGATTACA AGAGGACAGTATTTTATGTCTACCCGCTGCTTACTGTGAGCGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAAGAAAGAGAAGGTGG CCACCCAGCAACCAAAGACTCCGAGATGTGCAAATTCAGCCCAGCCGACTGGGAAAGGTTGAAAGGAAATCAGGACAAAAAGCCAAAGTC GGTCACCCTGGAGGAGGCCATTGCAGAACAGAACGAAAGTGAGAGATGCGAGTATAGTGTTGGAAACAAGCACCGTGATCCCTTTGAAGC CCCAGAGGACAAAGATCTTCCTGTGGAGAAGTACTTTGTGGAGAGGCAGCCTGTGAGCGAGCCTCCCGCAGACCAGGTGGCCTCGGACAT GCCTCACAGCCCCACCCTCCGGGTGGACAGGAAACGCAAAGTCTCAGGTGACAGCAGCCACACTGAGACCACTGCGGAGGAGGTGCCAGA GGACCCTCTGCTGAAAGCCAAACGCCGACGAGTCTCTAAAGATGACTGGCCTGAGAGGGAAATGACAAACAGTTCCTCTAACCACTTAGA AGACCCACATTATAGTGAGCTGACCAACCTGAAGGTGTGCATTGAATTAACAGGGCTCCATCCTAAAAAACAACGCCACTTGCTGCACCT TAGAGAACGATGGGAGCAGCAGGTGTCGGCAGCAGATGGCAAACCTGGCCGGCAAAGCAGGAAGGAAGTGACCCAGGCCACTCAGCCTGA GGCCATTCCTCAGGGGACTAACATCACTGAAGAGAAACCTGGCAGGAAAAGGGCAGAGGCCAAAGGCAACAGAAGCTGGTCGGAAGAGTC TCTTAAACCCAGTGACAATGAACAAGGCTTGCCTGTGTTCTCCGGCTCTCCGCCCATGAAGAGTCTTTCATCCACCAGTGCAGGCGGCAA AAAGCAGGCTCAGCCAAGCTGCGCACCAGCCTCCAGGCCGCCTGCCAAACAGCAGAAAATTAAAGAAAACCAGAAGACAGATGTGCTGTG TGCAGACGAAGAAGAGGATTGCCAGGCTGCCTCCCTGCTGCAGAAATACACCGACAACAGCGAGAAGCCATCCGGGAAGAGACTGTGCAA AACCAAACACTTGATCCCTCAGGAGTCCAGGCGGGGATTGCCACTGACAGGGGAATACTACGTGGAGAATGCCGATGGCAAGGTGACTGT CCGGAGATTCAGAAAGCGGCCGGAGCCCAGTTCGGACTATGATCTGTCACCAGCCAAGCAGGAGCCAAAGCCCTTCGACCGCTTGCAGCA ACTGCTACCAGCCTCCCAGTCCACACAGCTGCCATGCTCAAGTTCCCCTCAGGAGACCACCCAGTCTCGCCCTATGCCGCCGGAAGCACG GAGACTTATTGTCAATAAGAACGCTGGCGAGACCCTTCTGCAGCGGGCAGCCAGGCTTGGCTATGAGGAAGTGGTCCTGTACTGCTTAGA GAACAAGATTTGTGATGTAAATCATCGGGACAACGCAGGTTACTGCGCCCTGCATGAAGCTTGTGCTAGGGGCTGGCTCAACATTGTGCG ACACCTCCTTGAATATGGCGCTGATGTCAACTGTAGTGCCCAGGATGGAACCAGGCCTCTGCACGATGCTGTTGAGAACGATCACTTGGA AATTGTCCGACTACTTCTCTCTTATGGTGCTGACCCCACCTTGGCTACGTACTCAGGTAGAACCATCATGAAAATGACCCACAGTGAACT TATGGAAAAGTTCTTAACAGCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCACCCCCTCTACCCCG CATCTACAAGCCTTGCTTTGTCTGTCAGGACAAGTCCTCAGGCTACCACTATGGGGTCAGCGCCTGTGAGGGCTGCAAGGGCTTCTTCCG CCGCAGCATCCAGAAGAACATGGTGTACACGTGTCACCGGGACAAGAACTGCATCATCAACAAGGTGACCCGGAACCGCTGCCAGTACTG CCGACTGCAGAAGTGCTTTGAAGTGGGCATGTCCAAGGAGTCTGTGAGAAACGACCGAAACAAGAAGAAGAAGGAGGTGCCCAAGCCCGA GTGCTCTGAGAGCTACACGCTGACGCCGGAGGTGGGGGAGCTCATTGAGAAGGTGCGCAAAGCGCACCAGGAAACCTTCCCTGCCCTCTG CCAGCTGGGCAAATACACTACGAACAACAGCTCAGAACAACGTGTCTCTCTGGACATTGACCTCTGGGACAAGTTCAGTGAACTCTCCAC CAAGTGCATCATTAAGACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCACCACCCTCACCATCGCCGACCAGATCACCCTCCTCAAGGC TGCCTGCCTGGACATCCTGATCCTGCGGATCTGCACGCGGTACACGCCCGAGCAGGACACCATGACCTTCTCGGACGGGCTGACCCTGAA CCGGACCCAGATGCACAACGCTGGCTTCGGCCCCCTCACCGACCTGGTCTTTGCCTTCGCCAACCAGCTGCTGCCCCTGGAGATGGATGA TGCGGAGACGGGGCTGCTCAGCGCCATCTGCCTCATCTGCGGAGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGA GCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGA CCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAAT GTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAG CTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCG >9499_9499_2_BCOR-RARA_BCOR_chrX_39914621_ENST00000378444_RARA_chr17_38504566_ENST00000394089_length(amino acids)=1983AA_BP=1580 MLSATPLYGNVHSWMNSERVRMCGASEDRKILVNDGDASKARLELREENPLNHNVVDASTAHRIDGLAALSMDRTGLIREGLRVPGNIVY SSLCGLGSEKGREAATSTLGGLGFSSERNPEMQFKPNTPETVEASAVSGKPPNGFSAIYKTPPGIQKSAVATAEALGLDRPASDKQSPLN INGASYLRLPWVNPYMEGATPAIYPFLDSPNKYSLNMYKALLPQQSYSLAQPLYSPVCTNGERFLYLPPPHYVGPHIPSSLASPMRLSTP SASPAIPPLVHCADKSLPWKMGVSPGNPVDSHAYPHIQNSKQPRVPSAKAVTSGLPGDTALLLPPSPRPSPRVHLPTQPAADTYSEFHKH YARISTSPSVALSKPYMTVSSEFPAARLSNGKYPKAPEGGEGAQPVPGHARKTAVQDRKDGSSPPLLEKQTVTKDVTDKPLDLSSKVVDV DASKADHMKKMAPTVLVHSRAGSGLVLSGSEIPKETLSPPGNGCAIYRSEIISTAPSSWVVPGPSPNEENNGKSMSLKNKALDWAIPQQR SSSCPRMGGTDAVITNVSGSVSSAGRPASASPAPNANADGTKTSRSSVETTPSVIQHVGQPPATPAKHSSSTSSKGAKASNPEPSFKANE NGLPPSSIFLSPNEAFRSPPIPYPRSYLPYPAPEGIAVSPLSLHGKGPVYPHPVLLPNGSLFPGHLAPKPGLPYGLPTGRPEFVTYQDAL GLGMVHPMLIPHTPIEITKEEKPERRSRSHERARYEDPTLRNRFSEILETSSTKLHPDVPTDKNLKPNPNWNQGKTVVKSDKLVYVDLLR EEPDAKTDTNVSKPSFAAESVGQSAEPPKPSVEPALQQHRDFIALREELGRISDFHETYTFKQPVFTVSKDSVLAGTNKENLGLPVSTPF LEPPLGSDGPAVTFGKTQEDPKPFCVGSAPPSVDVTPTYTKDGADEAESNDGKVLKPKPSKLAKRIANSAGYVGDRFKCVTTELYADSSQ LSREQRALQMEGLQEDSILCLPAAYCERAMMRFSELEMKEREGGHPATKDSEMCKFSPADWERLKGNQDKKPKSVTLEEAIAEQNESERC EYSVGNKHRDPFEAPEDKDLPVEKYFVERQPVSEPPADQVASDMPHSPTLRVDRKRKVSGDSSHTETTAEEVPEDPLLKAKRRRVSKDDW PEREMTNSSSNHLEDPHYSELTNLKVCIELTGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRK RAEAKGNRSWSEESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKY TDNSEKPSGKRLCKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSP QETTQSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDG TRPLHDAVENDHLEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTAIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYH YGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEVPKPECSESYTLTPEVGELIE KVRKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTP EQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPS RPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPAT -------------------------------------------------------------- >9499_9499_3_BCOR-RARA_BCOR_chrX_39914621_ENST00000397354_RARA_chr17_38504566_ENST00000254066_length(transcript)=6649nt_BP=4868nt GCTCGCCGCGCTTCTCCGGCCCGGCTCCTTCTCCGCTCGTTAACGTCGCCAACCCCCCCCACCCCTCATATCTCTCTCCACCCACCCAAC CGCCCCCCGCTCCTTCTCGCCGCCTCGAGTCCGCTTGGGGGAAAACTTCAAAGAGCCGGATCGCAGGCTCCCTGCCTACTCCCCCACCGG GGATTTCAGACTAGACGCTTGAAGCAAAGCTGCCATCCCAGAAGACGACATGCTCTCAGCAACCCCCCTGTATGGGAACGTTCACAGCTG GATGAACAGCGAGAGGGTCCGCATGTGTGGGGCGAGCGAAGACAGGAAAATCCTTGTAAATGATGGTGACGCTTCAAAAGCCAGACTGGA ACTGAGGGAAGAGAATCCCTTGAACCACAACGTGGTGGATGCGAGCACGGCCCATAGGATCGATGGCCTGGCAGCACTGAGCATGGACCG CACTGGCCTGATCCGGGAAGGGCTGCGGGTCCCGGGAAACATCGTCTATTCTAGCTTGTGTGGACTGGGCTCAGAGAAAGGTCGGGAGGC TGCCACAAGCACTCTAGGTGGCCTTGGGTTTTCTTCGGAAAGAAATCCAGAGATGCAGTTCAAACCGAATACACCCGAGACAGTGGAGGC TTCTGCCGTCTCTGGAAAACCCCCAAATGGCTTCAGTGCTATATACAAAACACCGCCTGGAATACAAAAAAGTGCTGTAGCCACAGCAGA AGCGCTGGGCTTGGACAGGCCTGCCAGCGACAAACAGAGCCCTCTCAACATCAATGGTGCTAGTTATCTGCGGCTGCCCTGGGTCAATCC TTACATGGAGGGTGCCACGCCAGCCATCTACCCTTTCCTCGACTCGCCAAATAAGTATTCACTGAACATGTACAAGGCCTTGCTACCTCA GCAGTCCTACAGCTTGGCCCAGCCGCTGTATTCTCCAGTCTGCACCAATGGGGAGCGCTTTCTCTACCTGCCGCCACCTCACTACGTCGG TCCCCACATCCCATCGTCCTTGGCATCACCCATGAGGCTCTCGACACCTTCGGCCTCCCCAGCCATCCCGCCTCTCGTCCATTGCGCAGA CAAAAGCCTCCCGTGGAAGATGGGCGTCAGCCCTGGGAATCCTGTTGATTCCCACGCCTATCCTCACATCCAGAACAGTAAGCAGCCCAG GGTTCCCTCTGCCAAGGCGGTCACCAGTGGCCTGCCGGGGGACACAGCTCTCCTGTTGCCCCCCTCGCCTCGGCCGTCACCCCGAGTCCA CCTTCCCACCCAGCCTGCTGCAGACACCTACTCGGAGTTCCACAAGCACTATGCCAGGATCTCCACCTCTCCTTCAGTTGCCCTGTCAAA GCCATACATGACAGTTAGCAGCGAGTTCCCCGCGGCCAGGCTCTCCAATGGCAAGTATCCCAAGGCTCCGGAAGGGGGCGAAGGTGCCCA GCCAGTGCCCGGGCATGCCCGGAAGACAGCGGTTCAAGACAGAAAAGATGGCAGCTCACCTCCTCTGTTGGAGAAGCAGACCGTTACCAA AGACGTCACAGATAAGCCACTAGACTTGTCTTCTAAAGTGGTGGATGTAGATGCTTCCAAAGCTGACCACATGAAAAAGATGGCTCCCAC GGTCCTGGTTCACAGCAGGGCTGGAAGTGGCTTAGTGCTCTCCGGAAGTGAGATTCCGAAAGAAACACTATCTCCTCCAGGAAATGGTTG TGCTATCTATAGATCTGAAATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCCGGGCCAAGTCCTAACGAAGAGAACAATGGCAAAAG CATGTCGCTGAAAAACAAGGCATTGGACTGGGCGATACCACAGCAGCGGAGTTCATCATGCCCGCGCATGGGCGGCACCGATGCTGTCAT CACTAACGTTTCAGGGTCAGTGTCGAGTGCAGGCCGCCCAGCCTCCGCATCACCCGCCCCCAATGCCAATGCAGATGGCACCAAAACCAG CAGGAGCTCTGTAGAAACCACACCATCCGTTATTCAGCACGTGGGCCAGCCCCCGGCCACTCCTGCCAAGCACAGTAGCAGCACCAGCAG CAAGGGCGCCAAAGCCAGCAACCCAGAACCGAGTTTCAAAGCAAACGAGAACGGCCTTCCACCAAGCTCTATATTTCTGTCTCCAAATGA GGCATTCAGGTCCCCACCAATTCCCTACCCCAGGAGTTACCTCCCTTACCCAGCCCCTGAGGGCATTGCTGTAAGTCCCCTCTCCTTACA TGGCAAAGGACCTGTCTACCCTCACCCAGTTTTGTTACCCAATGGCAGTCTGTTTCCTGGGCACCTTGCCCCAAAGCCTGGGCTGCCCTA TGGGCTTCCCACCGGCCGTCCAGAGTTTGTGACCTACCAAGATGCCCTGGGGTTGGGCATGGTGCATCCCATGTTGATACCACACACGCC CATAGAGATTACTAAAGAGGAGAAACCAGAGAGGAGATCCCGGTCCCATGAGAGAGCCCGTTACGAGGACCCAACCCTCCGGAATCGGTT TTCCGAGATTTTGGAAACTAGCAGCACCAAGTTACATCCAGATGTCCCCACCGACAAGAACCTAAAGCCGAACCCCAACTGGAATCAAGG GAAGACTGTTGTCAAAAGCGACAAGCTTGTCTACGTAGACCTTCTCCGAGAAGAACCAGATGCTAAAACTGACACAAACGTGTCCAAACC CAGCTTTGCAGCAGAGAGTGTTGGCCAGAGCGCTGAGCCCCCCAAGCCCTCAGTTGAGCCGGCCCTGCAGCAGCACCGTGATTTCATCGC CCTGAGAGAGGAGTTGGGGCGCATCAGTGACTTCCACGAAACTTATACTTTCAAACAGCCAGTCTTCACCGTAAGCAAGGACAGTGTTCT GGCAGGTACCAACAAAGAGAACCTAGGGTTGCCAGTCTCGACTCCATTCCTGGAGCCACCTCTGGGGAGCGATGGCCCTGCTGTAACTTT TGGTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGGGCAGTGCCCCACCAAGTGTGGATGTGACCCCCACCTATACCAAAGATGGAGC TGATGAGGCTGAATCAAATGATGGCAAAGTTCTGAAACCGAAGCCATCTAAGCTGGCAAAGAGAATCGCCAACTCAGCGGGTTACGTGGG TGACCGATTCAAATGTGTCACTACCGAACTGTATGCAGATTCCAGTCAGCTCAGCCGGGAGCAACGGGCATTGCAGATGGAAGGATTACA AGAGGACAGTATTTTATGTCTACCCGCTGCTTACTGTGAGCGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAAGAAAGAGAAGGTGG CCACCCAGCAACCAAAGACTCCGAGATGTGCAAATTCAGCCCAGCCGACTGGGAAAGGTTGAAAGGAAATCAGGACAAAAAGCCAAAGTC GGTCACCCTGGAGGAGGCCATTGCAGAACAGAACGAAAGTGAGAGATGCGAGTATAGTGTTGGAAACAAGCACCGTGATCCCTTTGAAGC CCCAGAGGACAAAGATCTTCCTGTGGAGAAGTACTTTGTGGAGAGGCAGCCTGTGAGCGAGCCTCCCGCAGACCAGGTGGCCTCGGACAT GCCTCACAGCCCCACCCTCCGGGTGGACAGGAAACGCAAAGTCTCAGGTGACAGCAGCCACACTGAGACCACTGCGGAGGAGGTGCCAGA GGACCCTCTGCTGAAAGCCAAACGCCGACGAGTCTCTAAAGGGCTCCATCCTAAAAAACAACGCCACTTGCTGCACCTTAGAGAACGATG GGAGCAGCAGGTGTCGGCAGCAGATGGCAAACCTGGCCGGCAAAGCAGGAAGGAAGTGACCCAGGCCACTCAGCCTGAGGCCATTCCTCA GGGGACTAACATCACTGAAGAGAAACCTGGCAGGAAAAGGGCAGAGGCCAAAGGCAACAGAAGCTGGTCGGAAGAGTCTCTTAAACCCAG TGACAATGAACAAGGCTTGCCTGTGTTCTCCGGCTCTCCGCCCATGAAGAGTCTTTCATCCACCAGTGCAGGCGGCAAAAAGCAGGCTCA GCCAAGCTGCGCACCAGCCTCCAGGCCGCCTGCCAAACAGCAGAAAATTAAAGAAAACCAGAAGACAGATGTGCTGTGTGCAGACGAAGA AGAGGATTGCCAGGCTGCCTCCCTGCTGCAGAAATACACCGACAACAGCGAGAAGCCATCCGGGAAGAGACTGTGCAAAACCAAACACTT GATCCCTCAGGAGTCCAGGCGGGGATTGCCACTGACAGGGGAATACTACGTGGAGAATGCCGATGGCAAGGTGACTGTCCGGAGATTCAG AAAGCGGCCGGAGCCCAGTTCGGACTATGATCTGTCACCAGCCAAGCAGGAGCCAAAGCCCTTCGACCGCTTGCAGCAACTGCTACCAGC CTCCCAGTCCACACAGCTGCCATGCTCAAGTTCCCCTCAGGAGACCACCCAGTCTCGCCCTATGCCGCCGGAAGCACGGAGACTTATTGT CAATAAGAACGCTGGCGAGACCCTTCTGCAGCGGGCAGCCAGGCTTGGCTATGAGGAAGTGGTCCTGTACTGCTTAGAGAACAAGATTTG TGATGTAAATCATCGGGACAACGCAGGTTACTGCGCCCTGCATGAAGCTTGTGCTAGGGGCTGGCTCAACATTGTGCGACACCTCCTTGA ATATGGCGCTGATGTCAACTGTAGTGCCCAGGATGGAACCAGGCCTCTGCACGATGCTGTTGAGAACGATCACTTGGAAATTGTCCGACT ACTTCTCTCTTATGGTGCTGACCCCACCTTGGCTACGTACTCAGGTAGAACCATCATGAAAATGACCCACAGTGAACTTATGGAAAAGTT CTTAACAGCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCACCCCCTCTACCCCGCATCTACAAGCC TTGCTTTGTCTGTCAGGACAAGTCCTCAGGCTACCACTATGGGGTCAGCGCCTGTGAGGGCTGCAAGGGCTTCTTCCGCCGCAGCATCCA GAAGAACATGGTGTACACGTGTCACCGGGACAAGAACTGCATCATCAACAAGGTGACCCGGAACCGCTGCCAGTACTGCCGACTGCAGAA GTGCTTTGAAGTGGGCATGTCCAAGGAGTCTGTGAGAAACGACCGAAACAAGAAGAAGAAGGAGGTGCCCAAGCCCGAGTGCTCTGAGAG CTACACGCTGACGCCGGAGGTGGGGGAGCTCATTGAGAAGGTGCGCAAAGCGCACCAGGAAACCTTCCCTGCCCTCTGCCAGCTGGGCAA ATACACTACGAACAACAGCTCAGAACAACGTGTCTCTCTGGACATTGACCTCTGGGACAAGTTCAGTGAACTCTCCACCAAGTGCATCAT TAAGACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCACCACCCTCACCATCGCCGACCAGATCACCCTCCTCAAGGCTGCCTGCCTGGA CATCCTGATCCTGCGGATCTGCACGCGGTACACGCCCGAGCAGGACACCATGACCTTCTCGGACGGGCTGACCCTGAACCGGACCCAGAT GCACAACGCTGGCTTCGGCCCCCTCACCGACCTGGTCTTTGCCTTCGCCAACCAGCTGCTGCCCCTGGAGATGGATGATGCGGAGACGGG GCTGCTCAGCGCCATCTGCCTCATCTGCGGAGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGA GGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCAT CAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTC AGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAG CCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCG GCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGG GGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAG GCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCA GCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCT CAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGGGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGG >9499_9499_3_BCOR-RARA_BCOR_chrX_39914621_ENST00000397354_RARA_chr17_38504566_ENST00000254066_length(amino acids)=1949AA_BP=1546 MLSATPLYGNVHSWMNSERVRMCGASEDRKILVNDGDASKARLELREENPLNHNVVDASTAHRIDGLAALSMDRTGLIREGLRVPGNIVY SSLCGLGSEKGREAATSTLGGLGFSSERNPEMQFKPNTPETVEASAVSGKPPNGFSAIYKTPPGIQKSAVATAEALGLDRPASDKQSPLN INGASYLRLPWVNPYMEGATPAIYPFLDSPNKYSLNMYKALLPQQSYSLAQPLYSPVCTNGERFLYLPPPHYVGPHIPSSLASPMRLSTP SASPAIPPLVHCADKSLPWKMGVSPGNPVDSHAYPHIQNSKQPRVPSAKAVTSGLPGDTALLLPPSPRPSPRVHLPTQPAADTYSEFHKH YARISTSPSVALSKPYMTVSSEFPAARLSNGKYPKAPEGGEGAQPVPGHARKTAVQDRKDGSSPPLLEKQTVTKDVTDKPLDLSSKVVDV DASKADHMKKMAPTVLVHSRAGSGLVLSGSEIPKETLSPPGNGCAIYRSEIISTAPSSWVVPGPSPNEENNGKSMSLKNKALDWAIPQQR SSSCPRMGGTDAVITNVSGSVSSAGRPASASPAPNANADGTKTSRSSVETTPSVIQHVGQPPATPAKHSSSTSSKGAKASNPEPSFKANE NGLPPSSIFLSPNEAFRSPPIPYPRSYLPYPAPEGIAVSPLSLHGKGPVYPHPVLLPNGSLFPGHLAPKPGLPYGLPTGRPEFVTYQDAL GLGMVHPMLIPHTPIEITKEEKPERRSRSHERARYEDPTLRNRFSEILETSSTKLHPDVPTDKNLKPNPNWNQGKTVVKSDKLVYVDLLR EEPDAKTDTNVSKPSFAAESVGQSAEPPKPSVEPALQQHRDFIALREELGRISDFHETYTFKQPVFTVSKDSVLAGTNKENLGLPVSTPF LEPPLGSDGPAVTFGKTQEDPKPFCVGSAPPSVDVTPTYTKDGADEAESNDGKVLKPKPSKLAKRIANSAGYVGDRFKCVTTELYADSSQ LSREQRALQMEGLQEDSILCLPAAYCERAMMRFSELEMKEREGGHPATKDSEMCKFSPADWERLKGNQDKKPKSVTLEEAIAEQNESERC EYSVGNKHRDPFEAPEDKDLPVEKYFVERQPVSEPPADQVASDMPHSPTLRVDRKRKVSGDSSHTETTAEEVPEDPLLKAKRRRVSKGLH PKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSEESLKPSDNEQGLPVFSGSPPMK SLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRLCKTKHLIPQESRRGLPLTGEYY VENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPPEARRLIVNKNAGETLLQRAARLG YEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVENDHLEIVRLLLSYGADPTLATYSGR TIMKMTHSELMEKFLTAIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIIN KVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEVPKPECSESYTLTPEVGELIEKVRKAHQETFPALCQLGKYTTNNSSEQRVSLDID LWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFA NQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIP -------------------------------------------------------------- >9499_9499_4_BCOR-RARA_BCOR_chrX_39914621_ENST00000397354_RARA_chr17_38504566_ENST00000394089_length(transcript)=6184nt_BP=4868nt GCTCGCCGCGCTTCTCCGGCCCGGCTCCTTCTCCGCTCGTTAACGTCGCCAACCCCCCCCACCCCTCATATCTCTCTCCACCCACCCAAC CGCCCCCCGCTCCTTCTCGCCGCCTCGAGTCCGCTTGGGGGAAAACTTCAAAGAGCCGGATCGCAGGCTCCCTGCCTACTCCCCCACCGG GGATTTCAGACTAGACGCTTGAAGCAAAGCTGCCATCCCAGAAGACGACATGCTCTCAGCAACCCCCCTGTATGGGAACGTTCACAGCTG GATGAACAGCGAGAGGGTCCGCATGTGTGGGGCGAGCGAAGACAGGAAAATCCTTGTAAATGATGGTGACGCTTCAAAAGCCAGACTGGA ACTGAGGGAAGAGAATCCCTTGAACCACAACGTGGTGGATGCGAGCACGGCCCATAGGATCGATGGCCTGGCAGCACTGAGCATGGACCG CACTGGCCTGATCCGGGAAGGGCTGCGGGTCCCGGGAAACATCGTCTATTCTAGCTTGTGTGGACTGGGCTCAGAGAAAGGTCGGGAGGC TGCCACAAGCACTCTAGGTGGCCTTGGGTTTTCTTCGGAAAGAAATCCAGAGATGCAGTTCAAACCGAATACACCCGAGACAGTGGAGGC TTCTGCCGTCTCTGGAAAACCCCCAAATGGCTTCAGTGCTATATACAAAACACCGCCTGGAATACAAAAAAGTGCTGTAGCCACAGCAGA AGCGCTGGGCTTGGACAGGCCTGCCAGCGACAAACAGAGCCCTCTCAACATCAATGGTGCTAGTTATCTGCGGCTGCCCTGGGTCAATCC TTACATGGAGGGTGCCACGCCAGCCATCTACCCTTTCCTCGACTCGCCAAATAAGTATTCACTGAACATGTACAAGGCCTTGCTACCTCA GCAGTCCTACAGCTTGGCCCAGCCGCTGTATTCTCCAGTCTGCACCAATGGGGAGCGCTTTCTCTACCTGCCGCCACCTCACTACGTCGG TCCCCACATCCCATCGTCCTTGGCATCACCCATGAGGCTCTCGACACCTTCGGCCTCCCCAGCCATCCCGCCTCTCGTCCATTGCGCAGA CAAAAGCCTCCCGTGGAAGATGGGCGTCAGCCCTGGGAATCCTGTTGATTCCCACGCCTATCCTCACATCCAGAACAGTAAGCAGCCCAG GGTTCCCTCTGCCAAGGCGGTCACCAGTGGCCTGCCGGGGGACACAGCTCTCCTGTTGCCCCCCTCGCCTCGGCCGTCACCCCGAGTCCA CCTTCCCACCCAGCCTGCTGCAGACACCTACTCGGAGTTCCACAAGCACTATGCCAGGATCTCCACCTCTCCTTCAGTTGCCCTGTCAAA GCCATACATGACAGTTAGCAGCGAGTTCCCCGCGGCCAGGCTCTCCAATGGCAAGTATCCCAAGGCTCCGGAAGGGGGCGAAGGTGCCCA GCCAGTGCCCGGGCATGCCCGGAAGACAGCGGTTCAAGACAGAAAAGATGGCAGCTCACCTCCTCTGTTGGAGAAGCAGACCGTTACCAA AGACGTCACAGATAAGCCACTAGACTTGTCTTCTAAAGTGGTGGATGTAGATGCTTCCAAAGCTGACCACATGAAAAAGATGGCTCCCAC GGTCCTGGTTCACAGCAGGGCTGGAAGTGGCTTAGTGCTCTCCGGAAGTGAGATTCCGAAAGAAACACTATCTCCTCCAGGAAATGGTTG TGCTATCTATAGATCTGAAATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCCGGGCCAAGTCCTAACGAAGAGAACAATGGCAAAAG CATGTCGCTGAAAAACAAGGCATTGGACTGGGCGATACCACAGCAGCGGAGTTCATCATGCCCGCGCATGGGCGGCACCGATGCTGTCAT CACTAACGTTTCAGGGTCAGTGTCGAGTGCAGGCCGCCCAGCCTCCGCATCACCCGCCCCCAATGCCAATGCAGATGGCACCAAAACCAG CAGGAGCTCTGTAGAAACCACACCATCCGTTATTCAGCACGTGGGCCAGCCCCCGGCCACTCCTGCCAAGCACAGTAGCAGCACCAGCAG CAAGGGCGCCAAAGCCAGCAACCCAGAACCGAGTTTCAAAGCAAACGAGAACGGCCTTCCACCAAGCTCTATATTTCTGTCTCCAAATGA GGCATTCAGGTCCCCACCAATTCCCTACCCCAGGAGTTACCTCCCTTACCCAGCCCCTGAGGGCATTGCTGTAAGTCCCCTCTCCTTACA TGGCAAAGGACCTGTCTACCCTCACCCAGTTTTGTTACCCAATGGCAGTCTGTTTCCTGGGCACCTTGCCCCAAAGCCTGGGCTGCCCTA TGGGCTTCCCACCGGCCGTCCAGAGTTTGTGACCTACCAAGATGCCCTGGGGTTGGGCATGGTGCATCCCATGTTGATACCACACACGCC CATAGAGATTACTAAAGAGGAGAAACCAGAGAGGAGATCCCGGTCCCATGAGAGAGCCCGTTACGAGGACCCAACCCTCCGGAATCGGTT TTCCGAGATTTTGGAAACTAGCAGCACCAAGTTACATCCAGATGTCCCCACCGACAAGAACCTAAAGCCGAACCCCAACTGGAATCAAGG GAAGACTGTTGTCAAAAGCGACAAGCTTGTCTACGTAGACCTTCTCCGAGAAGAACCAGATGCTAAAACTGACACAAACGTGTCCAAACC CAGCTTTGCAGCAGAGAGTGTTGGCCAGAGCGCTGAGCCCCCCAAGCCCTCAGTTGAGCCGGCCCTGCAGCAGCACCGTGATTTCATCGC CCTGAGAGAGGAGTTGGGGCGCATCAGTGACTTCCACGAAACTTATACTTTCAAACAGCCAGTCTTCACCGTAAGCAAGGACAGTGTTCT GGCAGGTACCAACAAAGAGAACCTAGGGTTGCCAGTCTCGACTCCATTCCTGGAGCCACCTCTGGGGAGCGATGGCCCTGCTGTAACTTT TGGTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGGGCAGTGCCCCACCAAGTGTGGATGTGACCCCCACCTATACCAAAGATGGAGC TGATGAGGCTGAATCAAATGATGGCAAAGTTCTGAAACCGAAGCCATCTAAGCTGGCAAAGAGAATCGCCAACTCAGCGGGTTACGTGGG TGACCGATTCAAATGTGTCACTACCGAACTGTATGCAGATTCCAGTCAGCTCAGCCGGGAGCAACGGGCATTGCAGATGGAAGGATTACA AGAGGACAGTATTTTATGTCTACCCGCTGCTTACTGTGAGCGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAAGAAAGAGAAGGTGG CCACCCAGCAACCAAAGACTCCGAGATGTGCAAATTCAGCCCAGCCGACTGGGAAAGGTTGAAAGGAAATCAGGACAAAAAGCCAAAGTC GGTCACCCTGGAGGAGGCCATTGCAGAACAGAACGAAAGTGAGAGATGCGAGTATAGTGTTGGAAACAAGCACCGTGATCCCTTTGAAGC CCCAGAGGACAAAGATCTTCCTGTGGAGAAGTACTTTGTGGAGAGGCAGCCTGTGAGCGAGCCTCCCGCAGACCAGGTGGCCTCGGACAT GCCTCACAGCCCCACCCTCCGGGTGGACAGGAAACGCAAAGTCTCAGGTGACAGCAGCCACACTGAGACCACTGCGGAGGAGGTGCCAGA GGACCCTCTGCTGAAAGCCAAACGCCGACGAGTCTCTAAAGGGCTCCATCCTAAAAAACAACGCCACTTGCTGCACCTTAGAGAACGATG GGAGCAGCAGGTGTCGGCAGCAGATGGCAAACCTGGCCGGCAAAGCAGGAAGGAAGTGACCCAGGCCACTCAGCCTGAGGCCATTCCTCA GGGGACTAACATCACTGAAGAGAAACCTGGCAGGAAAAGGGCAGAGGCCAAAGGCAACAGAAGCTGGTCGGAAGAGTCTCTTAAACCCAG TGACAATGAACAAGGCTTGCCTGTGTTCTCCGGCTCTCCGCCCATGAAGAGTCTTTCATCCACCAGTGCAGGCGGCAAAAAGCAGGCTCA GCCAAGCTGCGCACCAGCCTCCAGGCCGCCTGCCAAACAGCAGAAAATTAAAGAAAACCAGAAGACAGATGTGCTGTGTGCAGACGAAGA AGAGGATTGCCAGGCTGCCTCCCTGCTGCAGAAATACACCGACAACAGCGAGAAGCCATCCGGGAAGAGACTGTGCAAAACCAAACACTT GATCCCTCAGGAGTCCAGGCGGGGATTGCCACTGACAGGGGAATACTACGTGGAGAATGCCGATGGCAAGGTGACTGTCCGGAGATTCAG AAAGCGGCCGGAGCCCAGTTCGGACTATGATCTGTCACCAGCCAAGCAGGAGCCAAAGCCCTTCGACCGCTTGCAGCAACTGCTACCAGC CTCCCAGTCCACACAGCTGCCATGCTCAAGTTCCCCTCAGGAGACCACCCAGTCTCGCCCTATGCCGCCGGAAGCACGGAGACTTATTGT CAATAAGAACGCTGGCGAGACCCTTCTGCAGCGGGCAGCCAGGCTTGGCTATGAGGAAGTGGTCCTGTACTGCTTAGAGAACAAGATTTG TGATGTAAATCATCGGGACAACGCAGGTTACTGCGCCCTGCATGAAGCTTGTGCTAGGGGCTGGCTCAACATTGTGCGACACCTCCTTGA ATATGGCGCTGATGTCAACTGTAGTGCCCAGGATGGAACCAGGCCTCTGCACGATGCTGTTGAGAACGATCACTTGGAAATTGTCCGACT ACTTCTCTCTTATGGTGCTGACCCCACCTTGGCTACGTACTCAGGTAGAACCATCATGAAAATGACCCACAGTGAACTTATGGAAAAGTT CTTAACAGCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCACCCCCTCTACCCCGCATCTACAAGCC TTGCTTTGTCTGTCAGGACAAGTCCTCAGGCTACCACTATGGGGTCAGCGCCTGTGAGGGCTGCAAGGGCTTCTTCCGCCGCAGCATCCA GAAGAACATGGTGTACACGTGTCACCGGGACAAGAACTGCATCATCAACAAGGTGACCCGGAACCGCTGCCAGTACTGCCGACTGCAGAA GTGCTTTGAAGTGGGCATGTCCAAGGAGTCTGTGAGAAACGACCGAAACAAGAAGAAGAAGGAGGTGCCCAAGCCCGAGTGCTCTGAGAG CTACACGCTGACGCCGGAGGTGGGGGAGCTCATTGAGAAGGTGCGCAAAGCGCACCAGGAAACCTTCCCTGCCCTCTGCCAGCTGGGCAA ATACACTACGAACAACAGCTCAGAACAACGTGTCTCTCTGGACATTGACCTCTGGGACAAGTTCAGTGAACTCTCCACCAAGTGCATCAT TAAGACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCACCACCCTCACCATCGCCGACCAGATCACCCTCCTCAAGGCTGCCTGCCTGGA CATCCTGATCCTGCGGATCTGCACGCGGTACACGCCCGAGCAGGACACCATGACCTTCTCGGACGGGCTGACCCTGAACCGGACCCAGAT GCACAACGCTGGCTTCGGCCCCCTCACCGACCTGGTCTTTGCCTTCGCCAACCAGCTGCTGCCCCTGGAGATGGATGATGCGGAGACGGG GCTGCTCAGCGCCATCTGCCTCATCTGCGGAGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGA GGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCAT CAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTC AGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAG CCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCG >9499_9499_4_BCOR-RARA_BCOR_chrX_39914621_ENST00000397354_RARA_chr17_38504566_ENST00000394089_length(amino acids)=1949AA_BP=1546 MLSATPLYGNVHSWMNSERVRMCGASEDRKILVNDGDASKARLELREENPLNHNVVDASTAHRIDGLAALSMDRTGLIREGLRVPGNIVY SSLCGLGSEKGREAATSTLGGLGFSSERNPEMQFKPNTPETVEASAVSGKPPNGFSAIYKTPPGIQKSAVATAEALGLDRPASDKQSPLN INGASYLRLPWVNPYMEGATPAIYPFLDSPNKYSLNMYKALLPQQSYSLAQPLYSPVCTNGERFLYLPPPHYVGPHIPSSLASPMRLSTP SASPAIPPLVHCADKSLPWKMGVSPGNPVDSHAYPHIQNSKQPRVPSAKAVTSGLPGDTALLLPPSPRPSPRVHLPTQPAADTYSEFHKH YARISTSPSVALSKPYMTVSSEFPAARLSNGKYPKAPEGGEGAQPVPGHARKTAVQDRKDGSSPPLLEKQTVTKDVTDKPLDLSSKVVDV DASKADHMKKMAPTVLVHSRAGSGLVLSGSEIPKETLSPPGNGCAIYRSEIISTAPSSWVVPGPSPNEENNGKSMSLKNKALDWAIPQQR SSSCPRMGGTDAVITNVSGSVSSAGRPASASPAPNANADGTKTSRSSVETTPSVIQHVGQPPATPAKHSSSTSSKGAKASNPEPSFKANE NGLPPSSIFLSPNEAFRSPPIPYPRSYLPYPAPEGIAVSPLSLHGKGPVYPHPVLLPNGSLFPGHLAPKPGLPYGLPTGRPEFVTYQDAL GLGMVHPMLIPHTPIEITKEEKPERRSRSHERARYEDPTLRNRFSEILETSSTKLHPDVPTDKNLKPNPNWNQGKTVVKSDKLVYVDLLR EEPDAKTDTNVSKPSFAAESVGQSAEPPKPSVEPALQQHRDFIALREELGRISDFHETYTFKQPVFTVSKDSVLAGTNKENLGLPVSTPF LEPPLGSDGPAVTFGKTQEDPKPFCVGSAPPSVDVTPTYTKDGADEAESNDGKVLKPKPSKLAKRIANSAGYVGDRFKCVTTELYADSSQ LSREQRALQMEGLQEDSILCLPAAYCERAMMRFSELEMKEREGGHPATKDSEMCKFSPADWERLKGNQDKKPKSVTLEEAIAEQNESERC EYSVGNKHRDPFEAPEDKDLPVEKYFVERQPVSEPPADQVASDMPHSPTLRVDRKRKVSGDSSHTETTAEEVPEDPLLKAKRRRVSKGLH PKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSEESLKPSDNEQGLPVFSGSPPMK SLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRLCKTKHLIPQESRRGLPLTGEYY VENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPPEARRLIVNKNAGETLLQRAARLG YEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVENDHLEIVRLLLSYGADPTLATYSGR TIMKMTHSELMEKFLTAIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIIN KVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEVPKPECSESYTLTPEVGELIEKVRKAHQETFPALCQLGKYTTNNSSEQRVSLDID LWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFA NQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIP -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for BCOR-RARA |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000342274 | - | 12 | 15 | 498_514 | 1546.3333333333333 | 1722.0 | BCL6 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378444 | - | 12 | 15 | 498_514 | 1580.3333333333333 | 1756.0 | BCL6 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000378455 | - | 11 | 14 | 498_514 | 1528.3333333333333 | 1704.0 | BCL6 |
Hgene | BCOR | chrX:39914621 | chr17:38504566 | ENST00000397354 | - | 12 | 15 | 498_514 | 1546.3333333333333 | 1722.0 | BCL6 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for BCOR-RARA |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | RARA | P10276 | DB00210 | Adapalene | Small molecule | Approved | |
Tgene | RARA | P10276 | DB00210 | Adapalene | Small molecule | Approved | |
Tgene | RARA | P10276 | DB00459 | Acitretin | Agonist | Small molecule | Approved |
Tgene | RARA | P10276 | DB00459 | Acitretin | Agonist | Small molecule | Approved |
Tgene | RARA | P10276 | DB00982 | Isotretinoin | Other/unknown | Small molecule | Approved |
Tgene | RARA | P10276 | DB00982 | Isotretinoin | Other/unknown | Small molecule | Approved |
Tgene | RARA | P10276 | DB00523 | Alitretinoin | Agonist | Small molecule | Approved|Investigational |
Tgene | RARA | P10276 | DB00523 | Alitretinoin | Agonist | Small molecule | Approved|Investigational |
Tgene | RARA | P10276 | DB00799 | Tazarotene | Agonist | Small molecule | Approved|Investigational |
Tgene | RARA | P10276 | DB00799 | Tazarotene | Agonist | Small molecule | Approved|Investigational |
Tgene | RARA | P10276 | DB12808 | Trifarotene | Agonist | Small molecule | Approved|Investigational |
Tgene | RARA | P10276 | DB12808 | Trifarotene | Agonist | Small molecule | Approved|Investigational |
Tgene | RARA | P10276 | DB00755 | Tretinoin | Small molecule | Approved|Investigational|Nutraceutical | |
Tgene | RARA | P10276 | DB00755 | Tretinoin | Small molecule | Approved|Investigational|Nutraceutical |
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Related Diseases for BCOR-RARA |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | BCOR | C1846265 | Microphthalmia, syndromic 2 | 4 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Hgene | BCOR | C0023487 | Acute Promyelocytic Leukemia | 2 | ORPHANET |
Hgene | BCOR | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human |
Hgene | BCOR | C0022665 | Kidney Neoplasm | 1 | CTD_human |
Hgene | BCOR | C0027708 | Nephroblastoma | 1 | CTD_human |
Hgene | BCOR | C0029463 | Osteosarcoma | 1 | CTD_human |
Hgene | BCOR | C0206651 | Clear Cell Sarcoma of Soft Tissue | 1 | CTD_human |
Hgene | BCOR | C0206656 | Embryonal Rhabdomyosarcoma | 1 | CTD_human |
Hgene | BCOR | C0334488 | Clear cell sarcoma of kidney | 1 | ORPHANET |
Hgene | BCOR | C0740457 | Malignant neoplasm of kidney | 1 | CTD_human |
Hgene | BCOR | C0796016 | Microphthalmia, syndromic 1 | 1 | CTD_human;ORPHANET |
Hgene | BCOR | C2930471 | Bilateral Wilms Tumor | 1 | CTD_human |
Tgene | C0023487 | Acute Promyelocytic Leukemia | 24 | CTD_human;ORPHANET | |
Tgene | C0036341 | Schizophrenia | 3 | PSYGENET | |
Tgene | C0006142 | Malignant neoplasm of breast | 1 | CTD_human | |
Tgene | C0009363 | Congenital ocular coloboma (disorder) | 1 | GENOMICS_ENGLAND | |
Tgene | C0010701 | Phyllodes Tumor | 1 | CTD_human | |
Tgene | C0085183 | Neoplasms, Second Primary | 1 | CTD_human | |
Tgene | C0086696 | Neoplasms, Therapy-Associated | 1 | CTD_human | |
Tgene | C0149940 | Sciatic Neuropathy | 1 | CTD_human | |
Tgene | C0154748 | Lesion of Sciatic Nerve | 1 | CTD_human | |
Tgene | C0206650 | Fibroadenoma | 1 | CTD_human | |
Tgene | C0242013 | Sciatic Neuritis | 1 | CTD_human | |
Tgene | C0525045 | Mood Disorders | 1 | PSYGENET | |
Tgene | C0600066 | Malignant Cystosarcoma Phyllodes | 1 | CTD_human | |
Tgene | C0678222 | Breast Carcinoma | 1 | CTD_human | |
Tgene | C0751924 | Neuralgia-Neuritis, Sciatic Nerve | 1 | CTD_human | |
Tgene | C0751925 | Sciatic Nerve Palsy | 1 | CTD_human | |
Tgene | C0877578 | Treatment related secondary malignancy | 1 | CTD_human | |
Tgene | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human | |
Tgene | C1458155 | Mammary Neoplasms | 1 | CTD_human | |
Tgene | C2239176 | Liver carcinoma | 1 | CTD_human | |
Tgene | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |