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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:LRRC16A-CDKAL1 (FusionGDB2 ID:HG55604TG54901) |
Fusion Gene Summary for LRRC16A-CDKAL1 |
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Fusion gene information | Fusion gene name: LRRC16A-CDKAL1 | Fusion gene ID: hg55604tg54901 | Hgene | Tgene | Gene symbol | LRRC16A | CDKAL1 | Gene ID | 55604 | 54901 |
Gene name | capping protein regulator and myosin 1 linker 1 | CDK5 regulatory subunit associated protein 1 like 1 | |
Synonyms | CARMIL|CARMIL1a|LRRC16|LRRC16A|dJ501N12.1|dJ501N12.5 | - | |
Cytomap | ('CARMIL1','LRRC16A')('CDKAL1','CDKAL1') 6p22.2 | 6p22.3 | |
Type of gene | protein-coding | protein-coding | |
Description | F-actin-uncapping protein LRRC16ACARMIL homologcapping protein regulator and myosin 1 linker protein 1capping protein, Arp2/3 and myosin-I linker homolog 1capping protein, Arp2/3 and myosin-I linker protein 1capping protein, Arp2/3, and Myosin-I Link | threonylcarbamoyladenosine tRNA methylthiotransferasetRNA-t(6)A37 methylthiotransferase | |
Modification date | 20200313 | 20200322 | |
UniProtAcc | . | Q5VV42 | |
Ensembl transtripts involved in fusion gene | ENST00000329474, ENST00000377969, ENST00000476458, | ||
Fusion gene scores | * DoF score | 7 X 5 X 7=245 | 23 X 22 X 8=4048 |
# samples | 8 | 30 | |
** MAII score | log2(8/245*10)=-1.61470984411521 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(30/4048*10)=-3.75417488419843 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: LRRC16A [Title/Abstract] AND CDKAL1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CARMIL1(25557078)-CDKAL1(21198252), # samples:1 LRRC16A(25557078)-CDKAL1(21198252), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | LRRC16A-CDKAL1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. LRRC16A-CDKAL1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. LRRC16A-CDKAL1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. LRRC16A-CDKAL1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | LRRC16A | GO:0030335 | positive regulation of cell migration | 19846667 |
Hgene | LRRC16A | GO:0044351 | macropinocytosis | 19846667 |
Hgene | LRRC16A | GO:0051639 | actin filament network formation | 19846667 |
Hgene | LRRC16A | GO:1902745 | positive regulation of lamellipodium organization | 16054028 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | PRAD | TCGA-XJ-A9DX-01A | CARMIL1 | chr6 | 25557078 | + | CDKAL1 | chr6 | 21198252 | + |
ChimerDB4 | PRAD | TCGA-XJ-A9DX-01A | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
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Fusion Gene ORF analysis for LRRC16A-CDKAL1 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000329474 | ENST00000476517 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
In-frame | ENST00000329474 | ENST00000274695 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
In-frame | ENST00000329474 | ENST00000378610 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
In-frame | ENST00000329474 | ENST00000378624 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
intron-3CDS | ENST00000377969 | ENST00000274695 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
intron-3CDS | ENST00000377969 | ENST00000378610 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
intron-3CDS | ENST00000377969 | ENST00000378624 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
intron-3CDS | ENST00000476458 | ENST00000274695 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
intron-3CDS | ENST00000476458 | ENST00000378610 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
intron-3CDS | ENST00000476458 | ENST00000378624 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
intron-intron | ENST00000377969 | ENST00000476517 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
intron-intron | ENST00000476458 | ENST00000476517 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000329474 | LRRC16A | chr6 | 25557078 | - | ENST00000274695 | CDKAL1 | chr6 | 21198252 | + | 4916 | 3110 | 368 | 3550 | 1060 |
ENST00000329474 | LRRC16A | chr6 | 25557078 | - | ENST00000378624 | CDKAL1 | chr6 | 21198252 | + | 4916 | 3110 | 368 | 3550 | 1060 |
ENST00000329474 | LRRC16A | chr6 | 25557078 | - | ENST00000378610 | CDKAL1 | chr6 | 21198252 | + | 4916 | 3110 | 368 | 3550 | 1060 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000329474 | ENST00000274695 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + | 0.000716794 | 0.99928325 |
ENST00000329474 | ENST00000378624 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + | 0.000716794 | 0.99928325 |
ENST00000329474 | ENST00000378610 | LRRC16A | chr6 | 25557078 | - | CDKAL1 | chr6 | 21198252 | + | 0.000716794 | 0.99928325 |
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Fusion Genomic Features for LRRC16A-CDKAL1 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for LRRC16A-CDKAL1 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr6:25557078/chr6:21198252) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | CDKAL1 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Catalyzes the methylthiolation of N6-threonylcarbamoyladenosine (t(6)A), leading to the formation of 2-methylthio-N6-threonylcarbamoyladenosine (ms(2)t(6)A) at position 37 in tRNAs that read codons beginning with adenine. {ECO:0000250|UniProtKB:Q91WE6}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 710_734 | 914 | 1372.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 245_269 | 914 | 1372.0 | Repeat | Note=LRR 1 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 275_298 | 914 | 1372.0 | Repeat | Note=LRR 2 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 304_327 | 914 | 1372.0 | Repeat | Note=LRR 3 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 336_363 | 914 | 1372.0 | Repeat | Note=LRR 4 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 391_418 | 914 | 1372.0 | Repeat | Note=LRR 5 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 423_447 | 914 | 1372.0 | Repeat | Note=LRR 6 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 481_506 | 914 | 1372.0 | Repeat | Note=LRR 7 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 543_566 | 914 | 1372.0 | Repeat | Note=LRR 8 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 570_593 | 914 | 1372.0 | Repeat | Note=LRR 9 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 654_678 | 914 | 1372.0 | Repeat | Note=LRR 10 |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000274695 | 12 | 16 | 431_493 | 433 | 580.0 | Domain | TRAM | |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000378610 | 10 | 14 | 431_493 | 433 | 580.0 | Domain | TRAM | |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000378624 | 10 | 14 | 431_493 | 342 | 489.0 | Domain | TRAM | |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000274695 | 12 | 16 | 556_578 | 433 | 580.0 | Transmembrane | Helical | |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000378610 | 10 | 14 | 556_578 | 433 | 580.0 | Transmembrane | Helical | |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000378624 | 10 | 14 | 556_578 | 342 | 489.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 710_734 | 0 | 177.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 1243_1250 | 914 | 1372.0 | Compositional bias | Note=Poly-Ser |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 1243_1250 | 0 | 177.0 | Compositional bias | Note=Poly-Ser |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 1055_1089 | 914 | 1372.0 | Region | Necessary for localization at the cell membrane |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 958_1082 | 914 | 1372.0 | Region | Inhibits capping activity of CAPZA2 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 1055_1089 | 0 | 177.0 | Region | Necessary for localization at the cell membrane |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 958_1082 | 0 | 177.0 | Region | Inhibits capping activity of CAPZA2 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000329474 | - | 29 | 37 | 958_981 | 914 | 1372.0 | Repeat | Note=LRR 11 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 245_269 | 0 | 177.0 | Repeat | Note=LRR 1 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 275_298 | 0 | 177.0 | Repeat | Note=LRR 2 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 304_327 | 0 | 177.0 | Repeat | Note=LRR 3 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 336_363 | 0 | 177.0 | Repeat | Note=LRR 4 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 391_418 | 0 | 177.0 | Repeat | Note=LRR 5 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 423_447 | 0 | 177.0 | Repeat | Note=LRR 6 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 481_506 | 0 | 177.0 | Repeat | Note=LRR 7 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 543_566 | 0 | 177.0 | Repeat | Note=LRR 8 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 570_593 | 0 | 177.0 | Repeat | Note=LRR 9 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 654_678 | 0 | 177.0 | Repeat | Note=LRR 10 |
Hgene | LRRC16A | chr6:25557078 | chr6:21198252 | ENST00000377969 | - | 1 | 12 | 958_981 | 0 | 177.0 | Repeat | Note=LRR 11 |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000274695 | 12 | 16 | 200_431 | 433 | 580.0 | Domain | Radical SAM core | |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000274695 | 12 | 16 | 64_172 | 433 | 580.0 | Domain | MTTase N-terminal | |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000378610 | 10 | 14 | 200_431 | 433 | 580.0 | Domain | Radical SAM core | |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000378610 | 10 | 14 | 64_172 | 433 | 580.0 | Domain | MTTase N-terminal | |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000378624 | 10 | 14 | 200_431 | 342 | 489.0 | Domain | Radical SAM core | |
Tgene | CDKAL1 | chr6:25557078 | chr6:21198252 | ENST00000378624 | 10 | 14 | 64_172 | 342 | 489.0 | Domain | MTTase N-terminal |
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Fusion Gene Sequence for LRRC16A-CDKAL1 |
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>49870_49870_1_LRRC16A-CDKAL1_LRRC16A_chr6_25557078_ENST00000329474_CDKAL1_chr6_21198252_ENST00000274695_length(transcript)=4916nt_BP=3110nt TGGGCGGGAGCTACGCCGGCCCAAGCCCCGCCGGGGACCAGCGAGCCGGGAGGAGGAGCAGGCGCCACAGCCGCCCCGCGCCCCGCGCCC GCTTGTAATCCGGTCCGCTCCTTATTCAGCCGCCGGGAACTGCGAGGAGGCGTCATGTAGCAGCAGCAGCAAATCCGCCTCGCATTTGCA ACTCTTTTTTTTTTTTTTGGTGGGGCGGGGGGCGCGCGGCAAAATTCTGTCTCCGCCCCCCCTTTTCTTGCCCACTTCCATTTGCAAGCT GCATCTGCCTCTCTAAAAAAATTGAGGAGTTCGGGGAAGGGCAGGGGGCCATAAATCAGAGTTGGACCTGCAATAACCCCCACACCTACA GGGCAACCATGACCGAGGAGAGCTCTGACGTTCCCAGGGAGTTGATAGAAAGCATAAAGGATGTTATTGGCAGAAAGATAAAAATTTCAG TGAAGAAGAAAGTAAAGTTGGAAGTTAAGGGAGACAAAGTTGAAAACAAAGTGCTGGTCCTTACATCATGCCGAGCCTTCCTTGTAACAG CGCGAATCCCCACCAAGCTCGAGTTAACCTTCAGCTACTTGGAGATTCATGGCGTCGTTTGCAGCAAGTCAGCTCAGATGATTGTGGAAA CTGAGAAGTGCAGCATTTCCATGAAGATGGCGTCACCCGAGGACGTGAGTGAGGTGCTGGCTCACATAGGCACCTGCCTGAGGAAGATAT TTCCTGGCCTCTCTCCAGTGAGAATCATGAAAAAAGTCTCCATGGAGCCATCTGAGCGCCTGGCTAGTCTCCAGGCGCTGTGGGACAGCC AGACCGTGGCTGAGCAGGGCCCCTGTGGTGGATTTTCTCAGATGTATGCCTGTGTTTGTGACTGGCTTGGATTTTCATACAGGGAAGAAG TACAATGGGATGTGGATACAATTTATCTTACCCAAGACACCAGGGAATTGAATTTACAAGATTTTAGTCATCTTGACCACAGGGACCTAA TACCTATCATTGCTGCTCTGGAATATAATCAGTGGTTCACAAAACTGTCCTCTAAGGATCTAAAACTGTCCACTGATGTCTGTGAACAGA TCTTGAGGGTGGTGAGTAGGTCCAATCGACTGGAAGAATTGGTGTTGGAAAATGCTGGACTTAGAACAGATTTTGCACAAAAACTGGCCA GTGCTCTAGCACATAATCCCAACTCAGGACTCCACACAATTAACCTTGCTGGCAACCCACTGGAGGATAGAGGTGTGTCCTCTTTAAGTA TTCAATTTGCCAAACTCCCAAAGGGATTAAAGCACTTAAATTTATCTAAAACCTCATTATCACCTAAAGGGGTGAACAGCCTTTCTCAGT CACTCAGTGCCAATCCATTGACCGCCTCTACCCTTGTCCACCTCGACCTCTCAGGGAACGTCCTTCGTGGAGATGACCTCTCACACATGT ATAATTTTTTGGCCCAGCCAAATGCCATTGTTCATCTGGATTTATCCAATACAGAATGTTCCCTGGACATGGTCTGTGGAGCTCTTCTCC GTGGATGCCTTCAATATTTAGCTGTGCTCAACCTCTCCAGAACTGTCTTCTCTCACCGGAAAGGAAAAGAAGTACCTCCATCTTTCAAGC AATTTTTTAGTAGTTCTCTGGCTTTGATGCACATCAACCTTTCAGGCACAAAACTGTCTCCTGAGCCCTTAAAAGCACTGTTATTGGGCC TGGCTTGTAATCATAACTTGAAAGGGGTTTCTCTGGATCTCAGCAACTGTGAGCTGAGATCAGGAGGTGCTCAAGTATTAGAAGGTTGCA TTGCTGAAATACACAACATCACCAGCTTAGACATCTCTGACAATGGTTTAGAATCTGACCTATCTACCTTAATAGTGTGGCTCAGTAAAA ACAGATCAATACAACACCTGGCGTTAGGCAAAAATTTTAATAATATGAAATCCAAAAATCTGACACCTGTATTGGACAACTTAGTACAGA TGATTCAAGATGAAGAATCACCTCTGCAGTCCTTGTCCCTGGCTGACTCGAAACTCAAGACTGAGGTCACCATCATCATCAATGCCCTGG GAAGCAACACCTCCCTGACCAAAGTGGACATTAGCGGCAACGGAATGGGGGACATGGGAGCGAAGATGCTGGCCAAAGCACTGCAGATCA ACACTAAGCTCAGGACTGTAATATGGGACAAGAACAACATCACTGCACAAGGCTTTCAGGATATAGCTGTTGCTATGGAAAAGAACTACA CATTAAGATTTATGCCAATTCCTATGTATGATGCTTCTCAAGCCCTAAAAACAAACCCTGAAAAAACAGAAGACGCTCTGCAAAAGATAG AAAACTACCTGCTACGAAATCACGAGACTAGAAAATACCTTCAAGAGCAGGCCTACCGCCTGCAGCAGGGTATTGTCACCAGCACCACCC AGCAGATGATTGACAGAATATGTGTGAAAGTACAAGATCATCTCAACTCCTTACGAAATTGTGGGGGAGACGCTATCCAGGAAGATTTAA AATCAGCAGAGCGGCTCATGCGTGATGCTAAGAACTCTAAAACGTTGTTACCAAATTTATACCATGTTGGTGGTGCATCTTGGGCGGGAG CCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGGAATCAATGGCTGGAGAAGTTACAAGAGTAGTAGATGAACAACTAAAGGCGT TGCTTGAGTCCATGGTTGATGCTGCTGAGAATCTTTGTCCCAATGTGATGAAAAAAGCCCACATTCGACAAGACTTGATTCATGCCAGCA CCGAAAAGATTTCTATTCCACGTACCTTTGTTAAAAATGTCCTGTTGGAGCAGTCTGGAATTGATATCCTTAACAAAATTAGTGAAGTAA AATTGACAGTGGCCTCGTTCCTGTCTGATAGAATTGTGGATGAAATCCTGGATGCACTCTCACATTGCCATCATAAACTGGCTGACCATT TCAGCAGACGTGGCAAGACCCTTCCTCAACAAGAATCCTTAGAGATCGAGCTGGCTGAGGAGAAGCCAGTTAAACGTTCCATCATCACAG TGGAGGAGCTAACAGAGATAGAGCGTTTGGAAGATCTGGATACCTGTATGATTGGTGAAAGACAACAAGTGTTAGTAACAGAAGAATCTT TTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGCAGGTTTTAGTGCCAAAGAACCCTGCGTTCATGGGGAAGATGGTTGAAG TGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAG CAAAGGGAGAAGTCTCGGGTTTGACAAAGGACTTCAGAAATGGGCTTGGGAACCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATCTC AGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGCTCTGC TGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTCTATAATTAGAATACAACTAATGGAAACATCTATAAAGAAGAATACATTTCTAATTAAA ATCTTCAATGAACAGGAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCTCCTTCTCAGCCACTCTTCTTA ATGAGGCTCCCCCTGTCTCACATTGAGTTGGGCCCATTGGTTATTTGACCTAAAACCTAATCACCGCTACCATAGCACATCCTTCAAATT AAACTGCTTTTGGTTTACTTTTAGCAAGAAATGCAAGCGGTTGCATTTTTTTCTGTTTGTTTCAATCTCTAATCTTTAAGTCAGAACCTA ATTGTACAGTGGCTCTGGCCATCTTTTCCTCATGTGGAAGAATTTTCTATCTTTAATAAACTTTTTCTTTGTTTTTTTTTTCCAGATGGA GTTTCGCTCTTGTCCCCCAGGCTGGAGTGGTGCAGTGGCACGATCTCAGGTCACTGCAACCTCTGCCTCCTGGGTTCAAACGATTCTCCT GCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCGCCACCAAGCCCAGACAATTTTTTTGTGTTTTCAGTAGAGACGGAGTTTCACC ATGTTGGCCAGGCTAGTCTCGAACTCCTGACCTCAAGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACT GCGCCCGGCCTCTTTAATAAATATTTTTAAGTGCATCTTCCCCTTCAGGCTTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCA CAGCAGATGTGTTCCTGAAAAGTGTATAGAAACCTGTTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG ACTCCTGGCAACATTCTGTGAAATATGAAACTGGAAAACTGGATTTGTCGAAAACTAATTGTGCCCATTTTCTCACATTTTTGATCCATT GGGGTTTTTTTTTTGTTTTTGTTTTTTTTTTTTTTTGAGTCAAGGTCTCACTCTGTCACCCTGGCTGGAGTGCAATGGCACTATCTTGGC TCACTGCAGCCTTGACCTCCTGGACTCAAGCAGTCCTCCTACCTCAGCCTCCCTAATAGCCAGGGGCTACAGGCATATACCACCATGCCC AACTAATTTTTTAATTTTTTGTAGAGATGAGTGTCACTATGTTGCCCAGGCTTGCCTGGAACTCCTAGCCTCAAGCAGTCTTCTTGCCTC AGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTCCACCCAGCCCAGATTAAATGTTTTTATTTCTACCTGCCATCATTGGTCTTT >49870_49870_1_LRRC16A-CDKAL1_LRRC16A_chr6_25557078_ENST00000329474_CDKAL1_chr6_21198252_ENST00000274695_length(amino acids)=1060AA_BP=914 MTEESSDVPRELIESIKDVIGRKIKISVKKKVKLEVKGDKVENKVLVLTSCRAFLVTARIPTKLELTFSYLEIHGVVCSKSAQMIVETEK CSISMKMASPEDVSEVLAHIGTCLRKIFPGLSPVRIMKKVSMEPSERLASLQALWDSQTVAEQGPCGGFSQMYACVCDWLGFSYREEVQW DVDTIYLTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILRVVSRSNRLEELVLENAGLRTDFAQKLASAL AHNPNSGLHTINLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTASTLVHLDLSGNVLRGDDLSHMYNF LAQPNAIVHLDLSNTECSLDMVCGALLRGCLQYLAVLNLSRTVFSHRKGKEVPPSFKQFFSSSLALMHINLSGTKLSPEPLKALLLGLAC NHNLKGVSLDLSNCELRSGGAQVLEGCIAEIHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ DEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKNYTLR FMPIPMYDASQALKTNPEKTEDALQKIENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGGDAIQEDLKSA ERLMRDAKNSKTLLPNLYHVGGASWAGASGLLSSPIQETLESMAGEVTRVVDEQLKALLESMVDAAENLCPNVMKKAHIRQDLIHASTEK ISIPRTFVKNVLLEQSGIDILNKISEVKLTVASFLSDRIVDEILDALSHCHHKLADHFSRRGKTLPQQESLEIELAEEKPVKRSIITVEE LTEIERLEDLDTCMIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKG -------------------------------------------------------------- >49870_49870_2_LRRC16A-CDKAL1_LRRC16A_chr6_25557078_ENST00000329474_CDKAL1_chr6_21198252_ENST00000378610_length(transcript)=4916nt_BP=3110nt TGGGCGGGAGCTACGCCGGCCCAAGCCCCGCCGGGGACCAGCGAGCCGGGAGGAGGAGCAGGCGCCACAGCCGCCCCGCGCCCCGCGCCC GCTTGTAATCCGGTCCGCTCCTTATTCAGCCGCCGGGAACTGCGAGGAGGCGTCATGTAGCAGCAGCAGCAAATCCGCCTCGCATTTGCA ACTCTTTTTTTTTTTTTTGGTGGGGCGGGGGGCGCGCGGCAAAATTCTGTCTCCGCCCCCCCTTTTCTTGCCCACTTCCATTTGCAAGCT GCATCTGCCTCTCTAAAAAAATTGAGGAGTTCGGGGAAGGGCAGGGGGCCATAAATCAGAGTTGGACCTGCAATAACCCCCACACCTACA GGGCAACCATGACCGAGGAGAGCTCTGACGTTCCCAGGGAGTTGATAGAAAGCATAAAGGATGTTATTGGCAGAAAGATAAAAATTTCAG TGAAGAAGAAAGTAAAGTTGGAAGTTAAGGGAGACAAAGTTGAAAACAAAGTGCTGGTCCTTACATCATGCCGAGCCTTCCTTGTAACAG CGCGAATCCCCACCAAGCTCGAGTTAACCTTCAGCTACTTGGAGATTCATGGCGTCGTTTGCAGCAAGTCAGCTCAGATGATTGTGGAAA CTGAGAAGTGCAGCATTTCCATGAAGATGGCGTCACCCGAGGACGTGAGTGAGGTGCTGGCTCACATAGGCACCTGCCTGAGGAAGATAT TTCCTGGCCTCTCTCCAGTGAGAATCATGAAAAAAGTCTCCATGGAGCCATCTGAGCGCCTGGCTAGTCTCCAGGCGCTGTGGGACAGCC AGACCGTGGCTGAGCAGGGCCCCTGTGGTGGATTTTCTCAGATGTATGCCTGTGTTTGTGACTGGCTTGGATTTTCATACAGGGAAGAAG TACAATGGGATGTGGATACAATTTATCTTACCCAAGACACCAGGGAATTGAATTTACAAGATTTTAGTCATCTTGACCACAGGGACCTAA TACCTATCATTGCTGCTCTGGAATATAATCAGTGGTTCACAAAACTGTCCTCTAAGGATCTAAAACTGTCCACTGATGTCTGTGAACAGA TCTTGAGGGTGGTGAGTAGGTCCAATCGACTGGAAGAATTGGTGTTGGAAAATGCTGGACTTAGAACAGATTTTGCACAAAAACTGGCCA GTGCTCTAGCACATAATCCCAACTCAGGACTCCACACAATTAACCTTGCTGGCAACCCACTGGAGGATAGAGGTGTGTCCTCTTTAAGTA TTCAATTTGCCAAACTCCCAAAGGGATTAAAGCACTTAAATTTATCTAAAACCTCATTATCACCTAAAGGGGTGAACAGCCTTTCTCAGT CACTCAGTGCCAATCCATTGACCGCCTCTACCCTTGTCCACCTCGACCTCTCAGGGAACGTCCTTCGTGGAGATGACCTCTCACACATGT ATAATTTTTTGGCCCAGCCAAATGCCATTGTTCATCTGGATTTATCCAATACAGAATGTTCCCTGGACATGGTCTGTGGAGCTCTTCTCC GTGGATGCCTTCAATATTTAGCTGTGCTCAACCTCTCCAGAACTGTCTTCTCTCACCGGAAAGGAAAAGAAGTACCTCCATCTTTCAAGC AATTTTTTAGTAGTTCTCTGGCTTTGATGCACATCAACCTTTCAGGCACAAAACTGTCTCCTGAGCCCTTAAAAGCACTGTTATTGGGCC TGGCTTGTAATCATAACTTGAAAGGGGTTTCTCTGGATCTCAGCAACTGTGAGCTGAGATCAGGAGGTGCTCAAGTATTAGAAGGTTGCA TTGCTGAAATACACAACATCACCAGCTTAGACATCTCTGACAATGGTTTAGAATCTGACCTATCTACCTTAATAGTGTGGCTCAGTAAAA ACAGATCAATACAACACCTGGCGTTAGGCAAAAATTTTAATAATATGAAATCCAAAAATCTGACACCTGTATTGGACAACTTAGTACAGA TGATTCAAGATGAAGAATCACCTCTGCAGTCCTTGTCCCTGGCTGACTCGAAACTCAAGACTGAGGTCACCATCATCATCAATGCCCTGG GAAGCAACACCTCCCTGACCAAAGTGGACATTAGCGGCAACGGAATGGGGGACATGGGAGCGAAGATGCTGGCCAAAGCACTGCAGATCA ACACTAAGCTCAGGACTGTAATATGGGACAAGAACAACATCACTGCACAAGGCTTTCAGGATATAGCTGTTGCTATGGAAAAGAACTACA CATTAAGATTTATGCCAATTCCTATGTATGATGCTTCTCAAGCCCTAAAAACAAACCCTGAAAAAACAGAAGACGCTCTGCAAAAGATAG AAAACTACCTGCTACGAAATCACGAGACTAGAAAATACCTTCAAGAGCAGGCCTACCGCCTGCAGCAGGGTATTGTCACCAGCACCACCC AGCAGATGATTGACAGAATATGTGTGAAAGTACAAGATCATCTCAACTCCTTACGAAATTGTGGGGGAGACGCTATCCAGGAAGATTTAA AATCAGCAGAGCGGCTCATGCGTGATGCTAAGAACTCTAAAACGTTGTTACCAAATTTATACCATGTTGGTGGTGCATCTTGGGCGGGAG CCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGGAATCAATGGCTGGAGAAGTTACAAGAGTAGTAGATGAACAACTAAAGGCGT TGCTTGAGTCCATGGTTGATGCTGCTGAGAATCTTTGTCCCAATGTGATGAAAAAAGCCCACATTCGACAAGACTTGATTCATGCCAGCA CCGAAAAGATTTCTATTCCACGTACCTTTGTTAAAAATGTCCTGTTGGAGCAGTCTGGAATTGATATCCTTAACAAAATTAGTGAAGTAA AATTGACAGTGGCCTCGTTCCTGTCTGATAGAATTGTGGATGAAATCCTGGATGCACTCTCACATTGCCATCATAAACTGGCTGACCATT TCAGCAGACGTGGCAAGACCCTTCCTCAACAAGAATCCTTAGAGATCGAGCTGGCTGAGGAGAAGCCAGTTAAACGTTCCATCATCACAG TGGAGGAGCTAACAGAGATAGAGCGTTTGGAAGATCTGGATACCTGTATGATTGGTGAAAGACAACAAGTGTTAGTAACAGAAGAATCTT TTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGCAGGTTTTAGTGCCAAAGAACCCTGCGTTCATGGGGAAGATGGTTGAAG TGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAG CAAAGGGAGAAGTCTCGGGTTTGACAAAGGACTTCAGAAATGGGCTTGGGAACCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATCTC AGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGCTCTGC TGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTCTATAATTAGAATACAACTAATGGAAACATCTATAAAGAAGAATACATTTCTAATTAAA ATCTTCAATGAACAGGAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCTCCTTCTCAGCCACTCTTCTTA ATGAGGCTCCCCCTGTCTCACATTGAGTTGGGCCCATTGGTTATTTGACCTAAAACCTAATCACCGCTACCATAGCACATCCTTCAAATT AAACTGCTTTTGGTTTACTTTTAGCAAGAAATGCAAGCGGTTGCATTTTTTTCTGTTTGTTTCAATCTCTAATCTTTAAGTCAGAACCTA ATTGTACAGTGGCTCTGGCCATCTTTTCCTCATGTGGAAGAATTTTCTATCTTTAATAAACTTTTTCTTTGTTTTTTTTTTCCAGATGGA GTTTCGCTCTTGTCCCCCAGGCTGGAGTGGTGCAGTGGCACGATCTCAGGTCACTGCAACCTCTGCCTCCTGGGTTCAAACGATTCTCCT GCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCGCCACCAAGCCCAGACAATTTTTTTGTGTTTTCAGTAGAGACGGAGTTTCACC ATGTTGGCCAGGCTAGTCTCGAACTCCTGACCTCAAGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACT GCGCCCGGCCTCTTTAATAAATATTTTTAAGTGCATCTTCCCCTTCAGGCTTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCA CAGCAGATGTGTTCCTGAAAAGTGTATAGAAACCTGTTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG ACTCCTGGCAACATTCTGTGAAATATGAAACTGGAAAACTGGATTTGTCGAAAACTAATTGTGCCCATTTTCTCACATTTTTGATCCATT GGGGTTTTTTTTTTGTTTTTGTTTTTTTTTTTTTTTGAGTCAAGGTCTCACTCTGTCACCCTGGCTGGAGTGCAATGGCACTATCTTGGC TCACTGCAGCCTTGACCTCCTGGACTCAAGCAGTCCTCCTACCTCAGCCTCCCTAATAGCCAGGGGCTACAGGCATATACCACCATGCCC AACTAATTTTTTAATTTTTTGTAGAGATGAGTGTCACTATGTTGCCCAGGCTTGCCTGGAACTCCTAGCCTCAAGCAGTCTTCTTGCCTC AGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTCCACCCAGCCCAGATTAAATGTTTTTATTTCTACCTGCCATCATTGGTCTTT >49870_49870_2_LRRC16A-CDKAL1_LRRC16A_chr6_25557078_ENST00000329474_CDKAL1_chr6_21198252_ENST00000378610_length(amino acids)=1060AA_BP=914 MTEESSDVPRELIESIKDVIGRKIKISVKKKVKLEVKGDKVENKVLVLTSCRAFLVTARIPTKLELTFSYLEIHGVVCSKSAQMIVETEK CSISMKMASPEDVSEVLAHIGTCLRKIFPGLSPVRIMKKVSMEPSERLASLQALWDSQTVAEQGPCGGFSQMYACVCDWLGFSYREEVQW DVDTIYLTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILRVVSRSNRLEELVLENAGLRTDFAQKLASAL AHNPNSGLHTINLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTASTLVHLDLSGNVLRGDDLSHMYNF LAQPNAIVHLDLSNTECSLDMVCGALLRGCLQYLAVLNLSRTVFSHRKGKEVPPSFKQFFSSSLALMHINLSGTKLSPEPLKALLLGLAC NHNLKGVSLDLSNCELRSGGAQVLEGCIAEIHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ DEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKNYTLR FMPIPMYDASQALKTNPEKTEDALQKIENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGGDAIQEDLKSA ERLMRDAKNSKTLLPNLYHVGGASWAGASGLLSSPIQETLESMAGEVTRVVDEQLKALLESMVDAAENLCPNVMKKAHIRQDLIHASTEK ISIPRTFVKNVLLEQSGIDILNKISEVKLTVASFLSDRIVDEILDALSHCHHKLADHFSRRGKTLPQQESLEIELAEEKPVKRSIITVEE LTEIERLEDLDTCMIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKG -------------------------------------------------------------- >49870_49870_3_LRRC16A-CDKAL1_LRRC16A_chr6_25557078_ENST00000329474_CDKAL1_chr6_21198252_ENST00000378624_length(transcript)=4916nt_BP=3110nt TGGGCGGGAGCTACGCCGGCCCAAGCCCCGCCGGGGACCAGCGAGCCGGGAGGAGGAGCAGGCGCCACAGCCGCCCCGCGCCCCGCGCCC GCTTGTAATCCGGTCCGCTCCTTATTCAGCCGCCGGGAACTGCGAGGAGGCGTCATGTAGCAGCAGCAGCAAATCCGCCTCGCATTTGCA ACTCTTTTTTTTTTTTTTGGTGGGGCGGGGGGCGCGCGGCAAAATTCTGTCTCCGCCCCCCCTTTTCTTGCCCACTTCCATTTGCAAGCT GCATCTGCCTCTCTAAAAAAATTGAGGAGTTCGGGGAAGGGCAGGGGGCCATAAATCAGAGTTGGACCTGCAATAACCCCCACACCTACA GGGCAACCATGACCGAGGAGAGCTCTGACGTTCCCAGGGAGTTGATAGAAAGCATAAAGGATGTTATTGGCAGAAAGATAAAAATTTCAG TGAAGAAGAAAGTAAAGTTGGAAGTTAAGGGAGACAAAGTTGAAAACAAAGTGCTGGTCCTTACATCATGCCGAGCCTTCCTTGTAACAG CGCGAATCCCCACCAAGCTCGAGTTAACCTTCAGCTACTTGGAGATTCATGGCGTCGTTTGCAGCAAGTCAGCTCAGATGATTGTGGAAA CTGAGAAGTGCAGCATTTCCATGAAGATGGCGTCACCCGAGGACGTGAGTGAGGTGCTGGCTCACATAGGCACCTGCCTGAGGAAGATAT TTCCTGGCCTCTCTCCAGTGAGAATCATGAAAAAAGTCTCCATGGAGCCATCTGAGCGCCTGGCTAGTCTCCAGGCGCTGTGGGACAGCC AGACCGTGGCTGAGCAGGGCCCCTGTGGTGGATTTTCTCAGATGTATGCCTGTGTTTGTGACTGGCTTGGATTTTCATACAGGGAAGAAG TACAATGGGATGTGGATACAATTTATCTTACCCAAGACACCAGGGAATTGAATTTACAAGATTTTAGTCATCTTGACCACAGGGACCTAA TACCTATCATTGCTGCTCTGGAATATAATCAGTGGTTCACAAAACTGTCCTCTAAGGATCTAAAACTGTCCACTGATGTCTGTGAACAGA TCTTGAGGGTGGTGAGTAGGTCCAATCGACTGGAAGAATTGGTGTTGGAAAATGCTGGACTTAGAACAGATTTTGCACAAAAACTGGCCA GTGCTCTAGCACATAATCCCAACTCAGGACTCCACACAATTAACCTTGCTGGCAACCCACTGGAGGATAGAGGTGTGTCCTCTTTAAGTA TTCAATTTGCCAAACTCCCAAAGGGATTAAAGCACTTAAATTTATCTAAAACCTCATTATCACCTAAAGGGGTGAACAGCCTTTCTCAGT CACTCAGTGCCAATCCATTGACCGCCTCTACCCTTGTCCACCTCGACCTCTCAGGGAACGTCCTTCGTGGAGATGACCTCTCACACATGT ATAATTTTTTGGCCCAGCCAAATGCCATTGTTCATCTGGATTTATCCAATACAGAATGTTCCCTGGACATGGTCTGTGGAGCTCTTCTCC GTGGATGCCTTCAATATTTAGCTGTGCTCAACCTCTCCAGAACTGTCTTCTCTCACCGGAAAGGAAAAGAAGTACCTCCATCTTTCAAGC AATTTTTTAGTAGTTCTCTGGCTTTGATGCACATCAACCTTTCAGGCACAAAACTGTCTCCTGAGCCCTTAAAAGCACTGTTATTGGGCC TGGCTTGTAATCATAACTTGAAAGGGGTTTCTCTGGATCTCAGCAACTGTGAGCTGAGATCAGGAGGTGCTCAAGTATTAGAAGGTTGCA TTGCTGAAATACACAACATCACCAGCTTAGACATCTCTGACAATGGTTTAGAATCTGACCTATCTACCTTAATAGTGTGGCTCAGTAAAA ACAGATCAATACAACACCTGGCGTTAGGCAAAAATTTTAATAATATGAAATCCAAAAATCTGACACCTGTATTGGACAACTTAGTACAGA TGATTCAAGATGAAGAATCACCTCTGCAGTCCTTGTCCCTGGCTGACTCGAAACTCAAGACTGAGGTCACCATCATCATCAATGCCCTGG GAAGCAACACCTCCCTGACCAAAGTGGACATTAGCGGCAACGGAATGGGGGACATGGGAGCGAAGATGCTGGCCAAAGCACTGCAGATCA ACACTAAGCTCAGGACTGTAATATGGGACAAGAACAACATCACTGCACAAGGCTTTCAGGATATAGCTGTTGCTATGGAAAAGAACTACA CATTAAGATTTATGCCAATTCCTATGTATGATGCTTCTCAAGCCCTAAAAACAAACCCTGAAAAAACAGAAGACGCTCTGCAAAAGATAG AAAACTACCTGCTACGAAATCACGAGACTAGAAAATACCTTCAAGAGCAGGCCTACCGCCTGCAGCAGGGTATTGTCACCAGCACCACCC AGCAGATGATTGACAGAATATGTGTGAAAGTACAAGATCATCTCAACTCCTTACGAAATTGTGGGGGAGACGCTATCCAGGAAGATTTAA AATCAGCAGAGCGGCTCATGCGTGATGCTAAGAACTCTAAAACGTTGTTACCAAATTTATACCATGTTGGTGGTGCATCTTGGGCGGGAG CCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGGAATCAATGGCTGGAGAAGTTACAAGAGTAGTAGATGAACAACTAAAGGCGT TGCTTGAGTCCATGGTTGATGCTGCTGAGAATCTTTGTCCCAATGTGATGAAAAAAGCCCACATTCGACAAGACTTGATTCATGCCAGCA CCGAAAAGATTTCTATTCCACGTACCTTTGTTAAAAATGTCCTGTTGGAGCAGTCTGGAATTGATATCCTTAACAAAATTAGTGAAGTAA AATTGACAGTGGCCTCGTTCCTGTCTGATAGAATTGTGGATGAAATCCTGGATGCACTCTCACATTGCCATCATAAACTGGCTGACCATT TCAGCAGACGTGGCAAGACCCTTCCTCAACAAGAATCCTTAGAGATCGAGCTGGCTGAGGAGAAGCCAGTTAAACGTTCCATCATCACAG TGGAGGAGCTAACAGAGATAGAGCGTTTGGAAGATCTGGATACCTGTATGATTGGTGAAAGACAACAAGTGTTAGTAACAGAAGAATCTT TTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGCAGGTTTTAGTGCCAAAGAACCCTGCGTTCATGGGGAAGATGGTTGAAG TGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAG CAAAGGGAGAAGTCTCGGGTTTGACAAAGGACTTCAGAAATGGGCTTGGGAACCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATCTC AGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGCTCTGC TGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTCTATAATTAGAATACAACTAATGGAAACATCTATAAAGAAGAATACATTTCTAATTAAA ATCTTCAATGAACAGGAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCTCCTTCTCAGCCACTCTTCTTA ATGAGGCTCCCCCTGTCTCACATTGAGTTGGGCCCATTGGTTATTTGACCTAAAACCTAATCACCGCTACCATAGCACATCCTTCAAATT AAACTGCTTTTGGTTTACTTTTAGCAAGAAATGCAAGCGGTTGCATTTTTTTCTGTTTGTTTCAATCTCTAATCTTTAAGTCAGAACCTA ATTGTACAGTGGCTCTGGCCATCTTTTCCTCATGTGGAAGAATTTTCTATCTTTAATAAACTTTTTCTTTGTTTTTTTTTTCCAGATGGA GTTTCGCTCTTGTCCCCCAGGCTGGAGTGGTGCAGTGGCACGATCTCAGGTCACTGCAACCTCTGCCTCCTGGGTTCAAACGATTCTCCT GCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCGCCACCAAGCCCAGACAATTTTTTTGTGTTTTCAGTAGAGACGGAGTTTCACC ATGTTGGCCAGGCTAGTCTCGAACTCCTGACCTCAAGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACT GCGCCCGGCCTCTTTAATAAATATTTTTAAGTGCATCTTCCCCTTCAGGCTTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCA CAGCAGATGTGTTCCTGAAAAGTGTATAGAAACCTGTTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG ACTCCTGGCAACATTCTGTGAAATATGAAACTGGAAAACTGGATTTGTCGAAAACTAATTGTGCCCATTTTCTCACATTTTTGATCCATT GGGGTTTTTTTTTTGTTTTTGTTTTTTTTTTTTTTTGAGTCAAGGTCTCACTCTGTCACCCTGGCTGGAGTGCAATGGCACTATCTTGGC TCACTGCAGCCTTGACCTCCTGGACTCAAGCAGTCCTCCTACCTCAGCCTCCCTAATAGCCAGGGGCTACAGGCATATACCACCATGCCC AACTAATTTTTTAATTTTTTGTAGAGATGAGTGTCACTATGTTGCCCAGGCTTGCCTGGAACTCCTAGCCTCAAGCAGTCTTCTTGCCTC AGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTCCACCCAGCCCAGATTAAATGTTTTTATTTCTACCTGCCATCATTGGTCTTT >49870_49870_3_LRRC16A-CDKAL1_LRRC16A_chr6_25557078_ENST00000329474_CDKAL1_chr6_21198252_ENST00000378624_length(amino acids)=1060AA_BP=914 MTEESSDVPRELIESIKDVIGRKIKISVKKKVKLEVKGDKVENKVLVLTSCRAFLVTARIPTKLELTFSYLEIHGVVCSKSAQMIVETEK CSISMKMASPEDVSEVLAHIGTCLRKIFPGLSPVRIMKKVSMEPSERLASLQALWDSQTVAEQGPCGGFSQMYACVCDWLGFSYREEVQW DVDTIYLTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILRVVSRSNRLEELVLENAGLRTDFAQKLASAL AHNPNSGLHTINLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTASTLVHLDLSGNVLRGDDLSHMYNF LAQPNAIVHLDLSNTECSLDMVCGALLRGCLQYLAVLNLSRTVFSHRKGKEVPPSFKQFFSSSLALMHINLSGTKLSPEPLKALLLGLAC NHNLKGVSLDLSNCELRSGGAQVLEGCIAEIHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ DEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKNYTLR FMPIPMYDASQALKTNPEKTEDALQKIENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGGDAIQEDLKSA ERLMRDAKNSKTLLPNLYHVGGASWAGASGLLSSPIQETLESMAGEVTRVVDEQLKALLESMVDAAENLCPNVMKKAHIRQDLIHASTEK ISIPRTFVKNVLLEQSGIDILNKISEVKLTVASFLSDRIVDEILDALSHCHHKLADHFSRRGKTLPQQESLEIELAEEKPVKRSIITVEE LTEIERLEDLDTCMIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKG -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for LRRC16A-CDKAL1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for LRRC16A-CDKAL1 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for LRRC16A-CDKAL1 |
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Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | C0011860 | Diabetes Mellitus, Non-Insulin-Dependent | 3 | CTD_human | |
Tgene | C0005910 | Body Weight | 2 | CTD_human | |
Tgene | C0005612 | Birth Weight | 1 | CTD_human | |
Tgene | C0263859 | Synovitis, Acne, Pustulosis, Hyperostosis, and Osteitis Syndrome | 1 | CTD_human |