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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:CDK5RAP2-AVEN (FusionGDB2 ID:HG55755TG57099) |
Fusion Gene Summary for CDK5RAP2-AVEN |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: CDK5RAP2-AVEN | Fusion gene ID: hg55755tg57099 | Hgene | Tgene | Gene symbol | CDK5RAP2 | AVEN | Gene ID | 55755 | 57099 |
| Gene name | CDK5 regulatory subunit associated protein 2 | apoptosis and caspase activation inhibitor | |
| Synonyms | C48|Cep215|MCPH3 | PDCD12 | |
| Cytomap | ('CDK5RAP2')('AVEN') 9q33.2 | 15q14 | |
| Type of gene | protein-coding | protein-coding | |
| Description | CDK5 regulatory subunit-associated protein 2CDK5 activator-binding protein C48centrosomal protein 215 kDacentrosomin | cell death regulator Avenapoptosis, caspase activation inhibitorprogrammed cell death 12 | |
| Modification date | 20200328 | 20200313 | |
| UniProtAcc | . | Q9NQS1 | |
| Ensembl transtripts involved in fusion gene | ENST00000349780, ENST00000359309, ENST00000360190, ENST00000360822, ENST00000480467, | ||
| Fusion gene scores | * DoF score | 12 X 13 X 5=780 | 5 X 3 X 5=75 |
| # samples | 13 | 5 | |
| ** MAII score | log2(13/780*10)=-2.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/75*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: CDK5RAP2 [Title/Abstract] AND AVEN [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | CDK5RAP2(123199573)-AVEN(34168196), # samples:2 | ||
| Anticipated loss of major functional domain due to fusion event. | CDK5RAP2-AVEN seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CDK5RAP2-AVEN seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CDK5RAP2-AVEN seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CDK5RAP2-AVEN seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | CDK5RAP2 | GO:0000226 | microtubule cytoskeleton organization | 17959831 |
| Hgene | CDK5RAP2 | GO:0001578 | microtubule bundle formation | 19553473 |
| Hgene | CDK5RAP2 | GO:0045893 | positive regulation of transcription, DNA-templated | 19282672 |
| Hgene | CDK5RAP2 | GO:0090266 | regulation of mitotic cell cycle spindle assembly checkpoint | 19282672 |
| Tgene | AVEN | GO:0043066 | negative regulation of apoptotic process | 10949025 |
| Fusion gene breakpoints across CDK5RAP2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across AVEN (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene information * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | GBM | TCGA-06-2562-01A | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - |
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Fusion Gene ORF analysis for CDK5RAP2-AVEN |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 5CDS-5UTR | ENST00000349780 | ENST00000558136 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - |
| 5CDS-5UTR | ENST00000359309 | ENST00000558136 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - |
| 5CDS-5UTR | ENST00000360190 | ENST00000558136 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - |
| 5CDS-5UTR | ENST00000360822 | ENST00000558136 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - |
| In-frame | ENST00000349780 | ENST00000306730 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - |
| In-frame | ENST00000359309 | ENST00000306730 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - |
| In-frame | ENST00000360190 | ENST00000306730 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - |
| In-frame | ENST00000360822 | ENST00000306730 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - |
| intron-3CDS | ENST00000480467 | ENST00000306730 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - |
| intron-5UTR | ENST00000480467 | ENST00000558136 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000360822 | CDK5RAP2 | chr9 | 123199573 | - | ENST00000306730 | AVEN | chr15 | 34168196 | - | 5070 | 4040 | 181 | 4683 | 1500 |
| ENST00000359309 | CDK5RAP2 | chr9 | 123199573 | - | ENST00000306730 | AVEN | chr15 | 34168196 | - | 5043 | 4013 | 181 | 4656 | 1491 |
| ENST00000349780 | CDK5RAP2 | chr9 | 123199573 | - | ENST00000306730 | AVEN | chr15 | 34168196 | - | 5165 | 4135 | 180 | 4778 | 1532 |
| ENST00000360190 | CDK5RAP2 | chr9 | 123199573 | - | ENST00000306730 | AVEN | chr15 | 34168196 | - | 5165 | 4135 | 180 | 4778 | 1532 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000360822 | ENST00000306730 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - | 0.003155584 | 0.9968444 |
| ENST00000359309 | ENST00000306730 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - | 0.001822002 | 0.998178 |
| ENST00000349780 | ENST00000306730 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - | 0.005693033 | 0.994307 |
| ENST00000360190 | ENST00000306730 | CDK5RAP2 | chr9 | 123199573 | - | AVEN | chr15 | 34168196 | - | 0.005693033 | 0.994307 |
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Fusion Genomic Features for CDK5RAP2-AVEN |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
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Fusion Protein Features for CDK5RAP2-AVEN |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr9:123199573/chr15:34168196) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | AVEN |
| FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Protects against apoptosis mediated by Apaf-1. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | AVEN | chr9:123199573 | chr15:34168196 | ENST00000306730 | 1 | 6 | 5_85 | 148 | 363.0 | Compositional bias | Note=Ala/Gly-rich |
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Fusion Gene Sequence for CDK5RAP2-AVEN |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >15268_15268_1_CDK5RAP2-AVEN_CDK5RAP2_chr9_123199573_ENST00000349780_AVEN_chr15_34168196_ENST00000306730_length(transcript)=5165nt_BP=4135nt GGAAGAAGCGCCGGGAAAGATGGCGGCGTCTGTGGTTTGAATTCCAGCGGCGCCGCCAGAGTCTGAACAAGAGCTGGGGTGGAGGGGGCG GGGACCTGGGGAGCCCGGCGGGTCGCTATCGCGGGGGGTACTAGTGGCGCCGCCGCCACAGACACCAACGCTGTCGCCACCTCTGTAGCC ATGATGGACTTGGTGTTGGAAGAGGACGTCACCGTCCCTGGGACGCTCAGCGGCTGCAGTGGCCTTGTTCCCAGTGTACCAGATGACCTG GATGGCATCAACCCCAATGCTGGGTTGGGAAATGGTCTGCTCCCAAATGTGTCAGAAGAAACAGTGTCTCCCACCAGAGCACGGAACATG AAGGACTTTGAAAATCAAATCACTGAATTGAAGAAAGAAAACTTTAACCTAAAGCTCCGCATCTATTTCCTTGAGGAAAGAATGCAACAG GAATTTCATGGCCCCACTGAACATATCTACAAAACTAACATTGAGCTCAAGGTGGAAGTAGAAAGTCTGAAGCGGGAACTCCAGGAGAGA GAGCAGCTGCTCATCAAAGCCTCCAAAGCAGTTGAGAGCTTAGCTGAAGCAGGTGGCTCTGAAATCCAGCGGGTGAAAGAAGATGCTCGA AAGAAGGTGCAGCAGGTGGAAGATCTCCTAACTAAAAGAATACTCCTTTTGGAAAAGGATGTGACAGCCGCCCAGGCAGAACTGGAAAAG GCCTTTGCAGGGACAGAGACGGAGAAGGCTCTTCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGAAGAAGATGCACGAGGGGGACTTG GCGATGGCTCTGGTCCTGGATGAGAAAGACAGACTGATTGAGGAGTTGAAGCTGTCTTTGAAGAGCAAAGAAGCTTTAATTCAGTGCCTT AAAGAGGAGAAATCTCAGATGGCATGTCCTGATGAGAATGTGTCATCTGGAGAGCTCCGAGGACTTTGTGCTGCTCCAAGGGAAGAAAAG GAGAGAGAAACTGAGGCTGCACAAATGGAGCATCAGAAGGAGAGAAACAGCTTTGAAGAGAGGATCCAGGCACTTGAAGAGGACCTGAGA GAGAAGGAAAGAGAAATTGCTACAGAGAAGAAAAATAGTCTAAAGAGGGATAAAGCCATTCAGGGTTTAACCATGGCATTAAAATCAAAG GAAAAAAAGGTTGAAGAACTTAACTCTGAAATTGAAAAGCTCAGTGCTGCCTTTGCTAAAGCCAGAGAGGCCCTACAGAAAGCACAGACC CAGGAATTTCAGGGGTCTGAAGACTATGAGACTGCTCTATCAGGAAAGGAAGCCCTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAAG AGTACAGAGAACCACAGACTGCGTAGAAGCATTAAGAAGATCACCCAGGAGCTGAGTGACTTGCAGCAGGAGAGGGAGAGACTGGAGAAG GACCTGGAGGAAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCATCCGTGATCTTAGAAATGAAGTTGAAAAATTACGCAATGAAGTG AATGAAAGAGAGAAAGCAATGGAAAATCGTTACAAGAGTCTTCTGAGTGAAAGCAATAAAAAATTGCACAATCAAGAGCAAGTGATCAAA CATCTAACAGAAAGTACCAATCAGAAGGACGTGTTGCTTCAGAAATTCAATGAAAAAGATTTGGAAGTAATACAGCAGAACTGCTATTTA ATGGCTGCAGAGGATCTTGAGCTCAGGAGTGAAGGCTTAATAACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAGCAAAACCATCTTC TCTAAGGAAAAGAAACAATCATCAGACTATGAAGAGCTGATTCAGGTCTTAAAGAAAGAGCAGGACATCTATACCCATCTGGTCAAATCT CTGCAGGAATCAGACAGTATCAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGAGCAGGATGTGCTTTCA TATCAGAATTTGCGGAAGACCTTGGAGGAGCAGATCAGCGAAATTCGGAGGCGGGAAGAAGAATCATTTTCACTTTATAGTGATCAAACA TCTTATCTAAGTATTTGCCTTGAAGAAAACAATCGGTTTCAAGTGGAACATTTTTCTCAAGAAGAACTTAAGAAAAAGGTCAGTGACCTT ATACAGCTAGTGAAGGAGCTGTATACAGACAACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGG TTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGCTTCTGGCTAGCAAGGAGGACGAGGACACGATCAAAATTGGGGAGGATGACGAG ATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGG CACACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTG TTCAATGAGAAGGCCACATTATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGACA GAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGTACATTTTGTCCAAACCAAC TCATTTTCCAAGCCACATGATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGAT GCCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACCGATCAAC ACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTGGCAGGCTGCCCTCCTTTCCCTCCCTGGTATTACCAAC AGAGAGGCTAAGAAGTCCCGCTTGCCAATCCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCAGGAGGTG GTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGAGTTTAAAACTTGTAATAAGCAACTTCACCAAAAGTTAATT CTGGCTGAAGCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACGTTGCTGAATGCTCAGCCCCCTGTGGGAGCAGCCTACCAGGACAGC CCAGGAGAGCAGAAAGGAATTAAAACCACATCTTCTGTCTGGAGAGACAAGGAAATGGACAGTGATCAGCAAAGAAGCTACGAGATTGAC TCTGAGATTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGATGTTCTGAGCCCAACTTCAGTAGCTACT TACCTGAGTTCCAAGAGTCAGCCTTCTGCTAAAGTCAGTGTGATGGGGACTGATCAGTCAGAGAGCATTAATACCTCAAATGAGACAGAA TACTTAAAACAGAAAATCCATGACTTGGAAACTGAGCTGGAAGGCTACCAGAATTTCATATTTCAGCTTCAAAAGCACTCCCAGTGCAGT GAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGACC TTTTCAAGTTTGCACCAAGTGCGATACGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGTGCTGGAG AACCTCAAACAGCAGCTGGAGGAACAGGAATACAAGCTGCAGAAGGAGCAGAATTTGAACATGCAACTTTTCAGTGAGATCCATAATCTG CAGAATAAGTTCAGAGATCTCTCACCTCCCAGATACGATTCATTAGTTCAGTCCCAAGCCAGGGAGCTCTCCCTTCAACGGCAGCAGATT AAGGATGGCCATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTTGAGGAGTTGCTGCAGGCCAGTGATGTG GATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCTGGAGAAATTGGAAAAGCTATTTCTCAACGGGGAC TCATTCTCACAGTTCCGGTTTGCTGAGGAGAAAGAATGGGATAGTGAAGCTTCTTGTCCAAAACAGAATTCAGCATTTTATGTGGATAGT GAGTTATTGGTTCGAGCCCTTCAAGAGCTGCCTCTCTGCCTCCGACTCAACGTTGCTGCCGAACTGGTCCAGGGTACAGTTCCTTTAGAG GTTCCTCAGGTGAAACCAAAGAGAACTGATGATGGCAAGGGATTAGGGATGCAGTTAAAGGGGCCCTTGGGGCCTGGAGGAAGGGGGCCC ATCTTTGAGCTGAAATCTGTGGCTGCTGGCTGCCCTGTGTTGCTGGGCAAAGACAACCCAAGCCCGGGTCCTTCAAGGGATTCTCAGAAA CCCACTTCCCCACTGCAGTCAGCAGGAGACCATTTGGAAGAAGAACTAGATCTGTTGCTTAATTTAGATGCACCTATAAAAGAGGGAGAT AACATCTTACCAGATCAGACGTCTCAGGACCTGAAATCCAAGGAAGATGGGGAGGTGGTCCAAGAGGAAGAAGTTTGTGCAAAACCATCT GTGACTGAAGAAAAAAACATGGAACCTGAGCAACCAAGTACCTCCAAAAATGTTACCGAGGAAGAGCTGGAAGACTGGTTGGACAGCATG ATTTCCTAAAAAGGGGAAAAAAAGTGCCTGAAGCAAATCTTGGTTGCCTTCTAACGGCAGGTGGGCATAAGGCTGTCCTTCAGGACCAGC CAGTTTACAAGCATGTCTCAAGCTAGTGTGTTCCATTATGCTCACAGCAGTAAATGCCTACCTCTGTGTTTGACATCTGAAAGAATACAT TGAAGCAGCTTGTTGCATTTGTTTTTCTGGCTTAGTAATCTAATAGATTTCCTTAAGGGCAGGAGATAGACTCTGGCCCTTGTTTCTAGC CTCCTTCCTTGCAGTGTTTACAACATAGCCAGTGTTTACAGCATAGCAGATGCTGCTGCTGATTAAGAGAATAGATGCAAACAAGGCATG >15268_15268_1_CDK5RAP2-AVEN_CDK5RAP2_chr9_123199573_ENST00000349780_AVEN_chr15_34168196_ENST00000306730_length(amino acids)=1532AA_BP=1318 MMDLVLEEDVTVPGTLSGCSGLVPSVPDDLDGINPNAGLGNGLLPNVSEETVSPTRARNMKDFENQITELKKENFNLKLRIYFLEERMQQ EFHGPTEHIYKTNIELKVEVESLKRELQEREQLLIKASKAVESLAEAGGSEIQRVKEDARKKVQQVEDLLTKRILLLEKDVTAAQAELEK AFAGTETEKALRLRLESKLSEMKKMHEGDLAMALVLDEKDRLIEELKLSLKSKEALIQCLKEEKSQMACPDENVSSGELRGLCAAPREEK ERETEAAQMEHQKERNSFEERIQALEEDLREKEREIATEKKNSLKRDKAIQGLTMALKSKEKKVEELNSEIEKLSAAFAKAREALQKAQT QEFQGSEDYETALSGKEALSAALRSQNLTKSTENHRLRRSIKKITQELSDLQQERERLEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEV NEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKDLEVIQQNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIF SKEKKQSSDYEELIQVLKKEQDIYTHLVKSLQESDSINNLQAELNKIFALRKQLEQDVLSYQNLRKTLEEQISEIRRREEESFSLYSDQT SYLSICLEENNRFQVEHFSQEELKKKVSDLIQLVKELYTDNQHLKKTIFDLSCMGFQGNGFPDRLASTEQTELLASKEDEDTIKIGEDDE INFLSDQHLQQSNEIMKDLSKGGCKNGYLRHTESKISDCDGAHAPGCLEEGAFINLLAPLFNEKATLLLESRPDLLKVVRELLLGQLFLT EQEVSGEHLDGKTEKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVATEGDLLRFKHEATREAWEEKPIN TALSAEHRPENLHGVPGWQAALLSLPGITNREAKKSRLPILIKPSRSLGNMYRLPATQEVVTQLQSQILELQGELKEFKTCNKQLHQKLI LAEAVMEGRPTPDKTLLNAQPPVGAAYQDSPGEQKGIKTTSSVWRDKEMDSDQQRSYEIDSEICPPDDLASLPSCKENPEDVLSPTSVAT YLSSKSQPSAKVSVMGTDQSESINTSNETEYLKQKIHDLETELEGYQNFIFQLQKHSQCSEAIITVLCGTEGAQDGLSKPKNGSDGEEMT FSSLHQVRYVKHVKILGPLAPEMIDSRVLENLKQQLEEQEYKLQKEQNLNMQLFSEIHNLQNKFRDLSPPRYDSLVQSQARELSLQRQQI KDGHGICVISRQHMNTMIKAFEELLQASDVDYCVAEGFQEQLNQCAELLEKLEKLFLNGDSFSQFRFAEEKEWDSEASCPKQNSAFYVDS ELLVRALQELPLCLRLNVAAELVQGTVPLEVPQVKPKRTDDGKGLGMQLKGPLGPGGRGPIFELKSVAAGCPVLLGKDNPSPGPSRDSQK PTSPLQSAGDHLEEELDLLLNLDAPIKEGDNILPDQTSQDLKSKEDGEVVQEEEVCAKPSVTEEKNMEPEQPSTSKNVTEEELEDWLDSM -------------------------------------------------------------- >15268_15268_2_CDK5RAP2-AVEN_CDK5RAP2_chr9_123199573_ENST00000359309_AVEN_chr15_34168196_ENST00000306730_length(transcript)=5043nt_BP=4013nt AGGAAGAAGCGCCGGGAAAGATGGCGGCGTCTGTGGTTTGAATTCCAGCGGCGCCGCCAGAGTCTGAACAAGAGCTGGGGTGGAGGGGGC GGGGACCTGGGGAGCCCGGCGGGTCGCTATCGCGGGGGGTACTAGTGGCGCCGCCGCCACAGACACCAACGCTGTCGCCACCTCTGTAGC CATGATGGACTTGGTGTTGGAAGAGGACGTCACCGTCCCTGGGACGCTCAGCGGCTGCAGTGGCCTTGTTCCCAGTGTACCAGATGACCT GGATGGCATCAACCCCAATGCTGGGTTGGGAAATGGTCTGCTCCCAAATGTGTCAGAAGAAACAGTGTCTCCCACCAGAGCACGGAACAT GAAGGACTTTGAAAATCAAATCACTGAATTGAAGAAAGAAAACTTTAACCTAAAGCTCCGCATCTATTTCCTTGAGGAAAGAATGCAACA GGAATTTCATGGCCCCACTGAACATATCTACAAAACTAACATTGAGCTCAAGGTGGAAGTAGAAAGTCTGAAGCGGGAACTCCAGGAGAG AGAGCAGCTGCTCATCAAAGCCTCCAAAGCAGTTGAGAGCTTAGCTGAAGCAGGTGGCTCTGAAATCCAGCGGGTGAAAGAAGATGCTCG AAAGAAGGTGCAGCAGGTGGAAGATCTCCTAACTAAAAGAATACTCCTTTTGGAAAAGGATGTGACAGCCGCCCAGGCAGAACTGGAAAA GGCCTTTGCAGGGACAGAGACGGAGAAGGCTCTTCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGAAGAAGATGCACGAGGGGGACTT GGCGATGGCTCTGGTCCTGGATGAGAAAGACAGACTGATTGAGGAGTTGAAGCTGTCTTTGAAGAGCAAAGAAGCTTTAATTCAGTGCCT TAAAGAGGAGAAATCTCAGATGGCATGTCCTGATGAGAATGTGTCATCTGGAGAGCTCCGAGGACTTTGTGCTGCTCCAAGGGAAGAAAA GGAGAGAGAAACTGAGGCTGCACAAATGGAGCATCAGAAGGAGAGAAACAGCTTTGAAGAGAGGATCCAGGCACTTGAAGAGGACCTGAG AGAGAAGGAAAGAGAAATTGCTACAGAGAAGAAAAATAGTCTAAAGAGGGATAAAGCCATTCAGGGTTTAACCATGGCATTAAAATCAAA GGAAAAAAAGGTTGAAGAACTTAACTCTGAAATTGAAAAGCTCAGTGCTGCCTTTGCTAAAGCCAGAGAGGCCCTACAGAAAGCACAGAC CCAGGAATTTCAGGGGTCTGAAGACTATGAGACTGCTCTATCAGGAAAGGAAGCCCTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAA GAGTACAGAGAACCACAGACTGCGTAGAAGCATTAAGAAGATCACCCAGGAGCTGAGTGACTTGCAGCAGGAGAGGGAGAGACTGGAGAA GGACCTGGAGGAAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCATCCGTGATCTTAGAAATGAAGTTGAAAAATTACGCAATGAAGT GAATGAAAGAGAGAAAGCAATGGAAAATCGTTACAAGAGTCTTCTGAGTGAAAGCAATAAAAAATTGCACAATCAAGAGCAAGTGATCAA ACATCTAACAGAAAGTACCAATCAGAAGGACGTGTTGCTTCAGAAATTCAATGAAAAAGATTTGGAAGTAATACAGCAGAACTGCTATTT AATGGCTGCAGAGGATCTTGAGCTCAGGAGTGAAGGCTTAATAACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAGCAAAACCATCTT CTCTAAGGAAAAGAAACAATCATCAGACTATGAAGAGCTGATTCAGGTCTTAAAGAAAGAGCAGGACATCTATACCCATCTGGTCAAATC TCTGCAGGAATCAGACAGTATCAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGAGCAGGATGTGCTTTC ATATCAGAATTTGCGGAAGACCTTGGAGGAGCAGATCAGCGAAATTCGGAGGCGGGAAGAAGAATCATTTTCACTTTATAGTGATCAAAC ATCTTATCTAAGTATTTGCCTTGAAGAAAACAATCGGTTTCAAGTGGAACATTTTTCTCAAGAAGAACTTAAGAAAAAGGTCAGTGACCT TATACAGCTAGTGAAGGAGCTGTATACAGACAACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGG GTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGCTTCTGGCTAGCAAGGAGGACGAGGACACGATCAAAATTGGGGAGGATGACGA GATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAG GCACACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTT GTTCAATGAGAAGGCCACATTATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGAC AGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGTACATTTTGTCCAAACCAA CTCATTTTCCAAGCCACATGATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGA TGCCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACCGATCAA CACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTGGCAGGCTGCCCTCCTTTCCCTCCCTGGTATTACCAA CAGAGAGGCTAAGAAGTCCCGCTTGCCAATCCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCAGGAGGT GGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGAGTTTAAAACTTGTAATAAGCAACTTCACCAAAAGTTAAT TCTGGCTGAAGCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACGTTGCTGAATGACTCTGAGATTTGCCCACCTGATGACCTTGCCAG CTTGCCATCATGCAAAGAAAATCCTGAAGATGTTCTGAGCCCAACTTCAGTAGCTACTTACCTGAGTTCCAAGAGTCAGCCTTCTGCTAA AGTCAGTGTGATGGGGACTGATCAGTCAGAGAGCATTAATACCTCAAATGAGACAGAATACTTAAAACAGAAAATCCATGACTTGGAAAC TGAGCTGGAAGGCTACCAGAATTTCATATTTCAGCTTCAAAAGCACTCCCAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGA AGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGACCTTTTCAAGTTTGCACCAAGTGCGATACGTGAA ACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGTGCTGGAGAACCTCAAACAGCAGCTGGAGGAACAGGAATA CAAGCTGCAGAAGGAGCAGAATTTGAACATGCAACTTTTCAGTGAGATCCATAATCTGCAGAATAAGTTCAGAGATCTCTCACCTCCCAG ATACGATTCATTAGTTCAGTCCCAAGCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAAGGATGGCCATGGCATCTGTGTCATCTCCCG TCAACACATGAACACCATGATTAAGGCATTTGAGGAGTTGCTGCAGGCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACA GCTGAATCAATGTGCTGAGCTGCTGGAGAAATTGGAAAAGCTATTTCTCAACGGGGACTCATTCTCACAGTTCCGGTTTGCTGAGGAGAA AGAATGGGATAGTGAAGCTTCTTGTCCAAAACAGAATTCAGCATTTTATGTGGATAGTGAGTTATTGGTTCGAGCCCTTCAAGAGCTGCC TCTCTGCCTCCGACTCAACGTTGCTGCCGAACTGGTCCAGGGTACAGTTCCTTTAGAGGTTCCTCAGGTGAAACCAAAGAGAACTGATGA TGGCAAGGGATTAGGGATGCAGTTAAAGGGGCCCTTGGGGCCTGGAGGAAGGGGGCCCATCTTTGAGCTGAAATCTGTGGCTGCTGGCTG CCCTGTGTTGCTGGGCAAAGACAACCCAAGCCCGGGTCCTTCAAGGGATTCTCAGAAACCCACTTCCCCACTGCAGTCAGCAGGAGACCA TTTGGAAGAAGAACTAGATCTGTTGCTTAATTTAGATGCACCTATAAAAGAGGGAGATAACATCTTACCAGATCAGACGTCTCAGGACCT GAAATCCAAGGAAGATGGGGAGGTGGTCCAAGAGGAAGAAGTTTGTGCAAAACCATCTGTGACTGAAGAAAAAAACATGGAACCTGAGCA ACCAAGTACCTCCAAAAATGTTACCGAGGAAGAGCTGGAAGACTGGTTGGACAGCATGATTTCCTAAAAAGGGGAAAAAAAGTGCCTGAA GCAAATCTTGGTTGCCTTCTAACGGCAGGTGGGCATAAGGCTGTCCTTCAGGACCAGCCAGTTTACAAGCATGTCTCAAGCTAGTGTGTT CCATTATGCTCACAGCAGTAAATGCCTACCTCTGTGTTTGACATCTGAAAGAATACATTGAAGCAGCTTGTTGCATTTGTTTTTCTGGCT TAGTAATCTAATAGATTTCCTTAAGGGCAGGAGATAGACTCTGGCCCTTGTTTCTAGCCTCCTTCCTTGCAGTGTTTACAACATAGCCAG TGTTTACAGCATAGCAGATGCTGCTGCTGATTAAGAGAATAGATGCAAACAAGGCATGCATTTGGCCAAAATAAACAAATGCTGGTCTGT >15268_15268_2_CDK5RAP2-AVEN_CDK5RAP2_chr9_123199573_ENST00000359309_AVEN_chr15_34168196_ENST00000306730_length(amino acids)=1491AA_BP=1277 MMDLVLEEDVTVPGTLSGCSGLVPSVPDDLDGINPNAGLGNGLLPNVSEETVSPTRARNMKDFENQITELKKENFNLKLRIYFLEERMQQ EFHGPTEHIYKTNIELKVEVESLKRELQEREQLLIKASKAVESLAEAGGSEIQRVKEDARKKVQQVEDLLTKRILLLEKDVTAAQAELEK AFAGTETEKALRLRLESKLSEMKKMHEGDLAMALVLDEKDRLIEELKLSLKSKEALIQCLKEEKSQMACPDENVSSGELRGLCAAPREEK ERETEAAQMEHQKERNSFEERIQALEEDLREKEREIATEKKNSLKRDKAIQGLTMALKSKEKKVEELNSEIEKLSAAFAKAREALQKAQT QEFQGSEDYETALSGKEALSAALRSQNLTKSTENHRLRRSIKKITQELSDLQQERERLEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEV NEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKDLEVIQQNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIF SKEKKQSSDYEELIQVLKKEQDIYTHLVKSLQESDSINNLQAELNKIFALRKQLEQDVLSYQNLRKTLEEQISEIRRREEESFSLYSDQT SYLSICLEENNRFQVEHFSQEELKKKVSDLIQLVKELYTDNQHLKKTIFDLSCMGFQGNGFPDRLASTEQTELLASKEDEDTIKIGEDDE INFLSDQHLQQSNEIMKDLSKGGCKNGYLRHTESKISDCDGAHAPGCLEEGAFINLLAPLFNEKATLLLESRPDLLKVVRELLLGQLFLT EQEVSGEHLDGKTEKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVATEGDLLRFKHEATREAWEEKPIN TALSAEHRPENLHGVPGWQAALLSLPGITNREAKKSRLPILIKPSRSLGNMYRLPATQEVVTQLQSQILELQGELKEFKTCNKQLHQKLI LAEAVMEGRPTPDKTLLNDSEICPPDDLASLPSCKENPEDVLSPTSVATYLSSKSQPSAKVSVMGTDQSESINTSNETEYLKQKIHDLET ELEGYQNFIFQLQKHSQCSEAIITVLCGTEGAQDGLSKPKNGSDGEEMTFSSLHQVRYVKHVKILGPLAPEMIDSRVLENLKQQLEEQEY KLQKEQNLNMQLFSEIHNLQNKFRDLSPPRYDSLVQSQARELSLQRQQIKDGHGICVISRQHMNTMIKAFEELLQASDVDYCVAEGFQEQ LNQCAELLEKLEKLFLNGDSFSQFRFAEEKEWDSEASCPKQNSAFYVDSELLVRALQELPLCLRLNVAAELVQGTVPLEVPQVKPKRTDD GKGLGMQLKGPLGPGGRGPIFELKSVAAGCPVLLGKDNPSPGPSRDSQKPTSPLQSAGDHLEEELDLLLNLDAPIKEGDNILPDQTSQDL -------------------------------------------------------------- >15268_15268_3_CDK5RAP2-AVEN_CDK5RAP2_chr9_123199573_ENST00000360190_AVEN_chr15_34168196_ENST00000306730_length(transcript)=5165nt_BP=4135nt GGAAGAAGCGCCGGGAAAGATGGCGGCGTCTGTGGTTTGAATTCCAGCGGCGCCGCCAGAGTCTGAACAAGAGCTGGGGTGGAGGGGGCG GGGACCTGGGGAGCCCGGCGGGTCGCTATCGCGGGGGGTACTAGTGGCGCCGCCGCCACAGACACCAACGCTGTCGCCACCTCTGTAGCC ATGATGGACTTGGTGTTGGAAGAGGACGTCACCGTCCCTGGGACGCTCAGCGGCTGCAGTGGCCTTGTTCCCAGTGTACCAGATGACCTG GATGGCATCAACCCCAATGCTGGGTTGGGAAATGGTCTGCTCCCAAATGTGTCAGAAGAAACAGTGTCTCCCACCAGAGCACGGAACATG AAGGACTTTGAAAATCAAATCACTGAATTGAAGAAAGAAAACTTTAACCTAAAGCTCCGCATCTATTTCCTTGAGGAAAGAATGCAACAG GAATTTCATGGCCCCACTGAACATATCTACAAAACTAACATTGAGCTCAAGGTGGAAGTAGAAAGTCTGAAGCGGGAACTCCAGGAGAGA GAGCAGCTGCTCATCAAAGCCTCCAAAGCAGTTGAGAGCTTAGCTGAAGCAGGTGGCTCTGAAATCCAGCGGGTGAAAGAAGATGCTCGA AAGAAGGTGCAGCAGGTGGAAGATCTCCTAACTAAAAGAATACTCCTTTTGGAAAAGGATGTGACAGCCGCCCAGGCAGAACTGGAAAAG GCCTTTGCAGGGACAGAGACGGAGAAGGCTCTTCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGAAGAAGATGCACGAGGGGGACTTG GCGATGGCTCTGGTCCTGGATGAGAAAGACAGACTGATTGAGGAGTTGAAGCTGTCTTTGAAGAGCAAAGAAGCTTTAATTCAGTGCCTT AAAGAGGAGAAATCTCAGATGGCATGTCCTGATGAGAATGTGTCATCTGGAGAGCTCCGAGGACTTTGTGCTGCTCCAAGGGAAGAAAAG GAGAGAGAAACTGAGGCTGCACAAATGGAGCATCAGAAGGAGAGAAACAGCTTTGAAGAGAGGATCCAGGCACTTGAAGAGGACCTGAGA GAGAAGGAAAGAGAAATTGCTACAGAGAAGAAAAATAGTCTAAAGAGGGATAAAGCCATTCAGGGTTTAACCATGGCATTAAAATCAAAG GAAAAAAAGGTTGAAGAACTTAACTCTGAAATTGAAAAGCTCAGTGCTGCCTTTGCTAAAGCCAGAGAGGCCCTACAGAAAGCACAGACC CAGGAATTTCAGGGGTCTGAAGACTATGAGACTGCTCTATCAGGAAAGGAAGCCCTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAAG AGTACAGAGAACCACAGACTGCGTAGAAGCATTAAGAAGATCACCCAGGAGCTGAGTGACTTGCAGCAGGAGAGGGAGAGACTGGAGAAG GACCTGGAGGAAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCATCCGTGATCTTAGAAATGAAGTTGAAAAATTACGCAATGAAGTG AATGAAAGAGAGAAAGCAATGGAAAATCGTTACAAGAGTCTTCTGAGTGAAAGCAATAAAAAATTGCACAATCAAGAGCAAGTGATCAAA CATCTAACAGAAAGTACCAATCAGAAGGACGTGTTGCTTCAGAAATTCAATGAAAAAGATTTGGAAGTAATACAGCAGAACTGCTATTTA ATGGCTGCAGAGGATCTTGAGCTCAGGAGTGAAGGCTTAATAACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAGCAAAACCATCTTC TCTAAGGAAAAGAAACAATCATCAGACTATGAAGAGCTGATTCAGGTCTTAAAGAAAGAGCAGGACATCTATACCCATCTGGTCAAATCT CTGCAGGAATCAGACAGTATCAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGAGCAGGATGTGCTTTCA TATCAGAATTTGCGGAAGACCTTGGAGGAGCAGATCAGCGAAATTCGGAGGCGGGAAGAAGAATCATTTTCACTTTATAGTGATCAAACA TCTTATCTAAGTATTTGCCTTGAAGAAAACAATCGGTTTCAAGTGGAACATTTTTCTCAAGAAGAACTTAAGAAAAAGGTCAGTGACCTT ATACAGCTAGTGAAGGAGCTGTATACAGACAACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGG TTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGCTTCTGGCTAGCAAGGAGGACGAGGACACGATCAAAATTGGGGAGGATGACGAG ATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGG CACACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTG TTCAATGAGAAGGCCACATTATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGACA GAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGTACATTTTGTCCAAACCAAC TCATTTTCCAAGCCACATGATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGAT GCCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACCGATCAAC ACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTGGCAGGCTGCCCTCCTTTCCCTCCCTGGTATTACCAAC AGAGAGGCTAAGAAGTCCCGCTTGCCAATCCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCAGGAGGTG GTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGAGTTTAAAACTTGTAATAAGCAACTTCACCAAAAGTTAATT CTGGCTGAAGCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACGTTGCTGAATGCTCAGCCCCCTGTGGGAGCAGCCTACCAGGACAGC CCAGGAGAGCAGAAAGGAATTAAAACCACATCTTCTGTCTGGAGAGACAAGGAAATGGACAGTGATCAGCAAAGAAGCTACGAGATTGAC TCTGAGATTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGATGTTCTGAGCCCAACTTCAGTAGCTACT TACCTGAGTTCCAAGAGTCAGCCTTCTGCTAAAGTCAGTGTGATGGGGACTGATCAGTCAGAGAGCATTAATACCTCAAATGAGACAGAA TACTTAAAACAGAAAATCCATGACTTGGAAACTGAGCTGGAAGGCTACCAGAATTTCATATTTCAGCTTCAAAAGCACTCCCAGTGCAGT GAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGACC TTTTCAAGTTTGCACCAAGTGCGATACGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGTGCTGGAG AACCTCAAACAGCAGCTGGAGGAACAGGAATACAAGCTGCAGAAGGAGCAGAATTTGAACATGCAACTTTTCAGTGAGATCCATAATCTG CAGAATAAGTTCAGAGATCTCTCACCTCCCAGATACGATTCATTAGTTCAGTCCCAAGCCAGGGAGCTCTCCCTTCAACGGCAGCAGATT AAGGATGGCCATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTTGAGGAGTTGCTGCAGGCCAGTGATGTG GATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCTGGAGAAATTGGAAAAGCTATTTCTCAACGGGGAC TCATTCTCACAGTTCCGGTTTGCTGAGGAGAAAGAATGGGATAGTGAAGCTTCTTGTCCAAAACAGAATTCAGCATTTTATGTGGATAGT GAGTTATTGGTTCGAGCCCTTCAAGAGCTGCCTCTCTGCCTCCGACTCAACGTTGCTGCCGAACTGGTCCAGGGTACAGTTCCTTTAGAG GTTCCTCAGGTGAAACCAAAGAGAACTGATGATGGCAAGGGATTAGGGATGCAGTTAAAGGGGCCCTTGGGGCCTGGAGGAAGGGGGCCC ATCTTTGAGCTGAAATCTGTGGCTGCTGGCTGCCCTGTGTTGCTGGGCAAAGACAACCCAAGCCCGGGTCCTTCAAGGGATTCTCAGAAA CCCACTTCCCCACTGCAGTCAGCAGGAGACCATTTGGAAGAAGAACTAGATCTGTTGCTTAATTTAGATGCACCTATAAAAGAGGGAGAT AACATCTTACCAGATCAGACGTCTCAGGACCTGAAATCCAAGGAAGATGGGGAGGTGGTCCAAGAGGAAGAAGTTTGTGCAAAACCATCT GTGACTGAAGAAAAAAACATGGAACCTGAGCAACCAAGTACCTCCAAAAATGTTACCGAGGAAGAGCTGGAAGACTGGTTGGACAGCATG ATTTCCTAAAAAGGGGAAAAAAAGTGCCTGAAGCAAATCTTGGTTGCCTTCTAACGGCAGGTGGGCATAAGGCTGTCCTTCAGGACCAGC CAGTTTACAAGCATGTCTCAAGCTAGTGTGTTCCATTATGCTCACAGCAGTAAATGCCTACCTCTGTGTTTGACATCTGAAAGAATACAT TGAAGCAGCTTGTTGCATTTGTTTTTCTGGCTTAGTAATCTAATAGATTTCCTTAAGGGCAGGAGATAGACTCTGGCCCTTGTTTCTAGC CTCCTTCCTTGCAGTGTTTACAACATAGCCAGTGTTTACAGCATAGCAGATGCTGCTGCTGATTAAGAGAATAGATGCAAACAAGGCATG >15268_15268_3_CDK5RAP2-AVEN_CDK5RAP2_chr9_123199573_ENST00000360190_AVEN_chr15_34168196_ENST00000306730_length(amino acids)=1532AA_BP=1318 MMDLVLEEDVTVPGTLSGCSGLVPSVPDDLDGINPNAGLGNGLLPNVSEETVSPTRARNMKDFENQITELKKENFNLKLRIYFLEERMQQ EFHGPTEHIYKTNIELKVEVESLKRELQEREQLLIKASKAVESLAEAGGSEIQRVKEDARKKVQQVEDLLTKRILLLEKDVTAAQAELEK AFAGTETEKALRLRLESKLSEMKKMHEGDLAMALVLDEKDRLIEELKLSLKSKEALIQCLKEEKSQMACPDENVSSGELRGLCAAPREEK ERETEAAQMEHQKERNSFEERIQALEEDLREKEREIATEKKNSLKRDKAIQGLTMALKSKEKKVEELNSEIEKLSAAFAKAREALQKAQT QEFQGSEDYETALSGKEALSAALRSQNLTKSTENHRLRRSIKKITQELSDLQQERERLEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEV NEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKDLEVIQQNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIF SKEKKQSSDYEELIQVLKKEQDIYTHLVKSLQESDSINNLQAELNKIFALRKQLEQDVLSYQNLRKTLEEQISEIRRREEESFSLYSDQT SYLSICLEENNRFQVEHFSQEELKKKVSDLIQLVKELYTDNQHLKKTIFDLSCMGFQGNGFPDRLASTEQTELLASKEDEDTIKIGEDDE INFLSDQHLQQSNEIMKDLSKGGCKNGYLRHTESKISDCDGAHAPGCLEEGAFINLLAPLFNEKATLLLESRPDLLKVVRELLLGQLFLT EQEVSGEHLDGKTEKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVATEGDLLRFKHEATREAWEEKPIN TALSAEHRPENLHGVPGWQAALLSLPGITNREAKKSRLPILIKPSRSLGNMYRLPATQEVVTQLQSQILELQGELKEFKTCNKQLHQKLI LAEAVMEGRPTPDKTLLNAQPPVGAAYQDSPGEQKGIKTTSSVWRDKEMDSDQQRSYEIDSEICPPDDLASLPSCKENPEDVLSPTSVAT YLSSKSQPSAKVSVMGTDQSESINTSNETEYLKQKIHDLETELEGYQNFIFQLQKHSQCSEAIITVLCGTEGAQDGLSKPKNGSDGEEMT FSSLHQVRYVKHVKILGPLAPEMIDSRVLENLKQQLEEQEYKLQKEQNLNMQLFSEIHNLQNKFRDLSPPRYDSLVQSQARELSLQRQQI KDGHGICVISRQHMNTMIKAFEELLQASDVDYCVAEGFQEQLNQCAELLEKLEKLFLNGDSFSQFRFAEEKEWDSEASCPKQNSAFYVDS ELLVRALQELPLCLRLNVAAELVQGTVPLEVPQVKPKRTDDGKGLGMQLKGPLGPGGRGPIFELKSVAAGCPVLLGKDNPSPGPSRDSQK PTSPLQSAGDHLEEELDLLLNLDAPIKEGDNILPDQTSQDLKSKEDGEVVQEEEVCAKPSVTEEKNMEPEQPSTSKNVTEEELEDWLDSM -------------------------------------------------------------- >15268_15268_4_CDK5RAP2-AVEN_CDK5RAP2_chr9_123199573_ENST00000360822_AVEN_chr15_34168196_ENST00000306730_length(transcript)=5070nt_BP=4040nt AGGAAGAAGCGCCGGGAAAGATGGCGGCGTCTGTGGTTTGAATTCCAGCGGCGCCGCCAGAGTCTGAACAAGAGCTGGGGTGGAGGGGGC GGGGACCTGGGGAGCCCGGCGGGTCGCTATCGCGGGGGGTACTAGTGGCGCCGCCGCCACAGACACCAACGCTGTCGCCACCTCTGTAGC CATGATGGACTTGGTGTTGGAAGAGGACGTCACCGTCCCTGGGACGCTCAGCGGCTGCAGTGGCCTTGTTCCCAGTGTACCAGATGACCT GGATGGCATCAACCCCAATGCTGGGTTGGGAAATGGTCTGCTCCCAAATGTGTCAGAAGAAACAGTGTCTCCCACCAGAGCACGGAACAT GAAGGACTTTGAAAATCAAATCACTGAATTGAAGAAAGAAAACTTTAACCTAAAGCTCCGCATCTATTTCCTTGAGGAAAGAATGCAACA GGAATTTCATGGCCCCACTGAACATATCTACAAAACTAACATTGAGCTCAAGGTGGAAGTAGAAAGTCTGAAGCGGGAACTCCAGGAGAG AGAGCAGCTGCTCATCAAAGCCTCCAAAGCAGTTGAGAGCTTAGCTGAAGCAGGTGGCTCTGAAATCCAGCGGGTGAAAGAAGATGCTCG AAAGAAGGTGCAGCAGGTGGAAGATCTCCTAACTAAAAGAATACTCCTTTTGGAAAAGGATGTGACAGCCGCCCAGGCAGAACTGGAAAA GGCCTTTGCAGGGACAGAGACGGAGAAGGCTCTTCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGAAGAAGATGCACGAGGGGGACTT GGCGATGGCTCTGGTCCTGGATGAGAAAGACAGACTGATTGAGGAGTTGAAGCTGTCTTTGAAGAGCAAAGAAGCTTTAATTCAGTGCCT TAAAGAGGAGAAATCTCAGATGGCATGTCCTGATGAGAATGTGTCATCTGGAGAGCTCCGAGGACTTTGTGCTGCTCCAAGGGAAGAAAA GGAGAGAGAAACTGAGGCTGCACAAATGGAGCATCAGAAGGAGAGAAACAGCTTTGAAGAGAGGATCCAGGCACTTGAAGAGGACCTGAG AGAGAAGGAAAGAGAAATTGCTACAGAGAAGAAAAATAGTCTAAAGAGGGATAAAGCCATTCAGGGTTTAACCATGGCATTAAAATCAAA GGAAAAAAAGGTTGAAGAACTTAACTCTGAAATTGAAAAGCTCAGTGCTGCCTTTGCTAAAGCCAGAGAGGCCCTACAGAAAGCACAGAC CCAGGAATTTCAGGGGTCTGAAGACTATGAGACTGCTCTATCAGGAAAGGAAGCCCTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAA GAGTACAGAGAACCACAGACTGCGTAGAAGCATTAAGAAGATCACCCAGGAGCTGAGTGACTTGCAGCAGGAGAGGGAGAGACTGGAGAA GGACCTGGAGGAAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCATCCGTGATCTTAGAAATGAAGTTGAAAAATTACGCAATGAAGT GAATGAAAGAGAGAAAGCAATGGAAAATCGTTACAAGAGTCTTCTGAGTGAAAGCAATAAAAAATTGCACAATCAAGAGCAAGTGATCAA ACATCTAACAGAAAGTACCAATCAGAAGGACGTGTTGCTTCAGAAATTCAATGAAAAAGATTTGGAAGTAATACAGCAGAACTGCTATTT AATGGCTGCAGAGGATCTTGAGCTCAGGAGTGAAGGCTTAATAACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAGCAAAACCATCTT CTCTAAGGAAAAGAAACAATCATCAGACTATGAAGAGCTGATTCAGGTCTTAAAGAAAGAGCAGGACATCTATACCCATCTGGTCAAATC TCTGCAGGAATCAGACAGTATCAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGAGCAGGATGTGCTTTC ATATCAGAATTTGCGGAAGACCTTGGAGGAGCAGATCAGCGAAATTCGGAGGCGGGAAGAAGAATCATTTTCACTTTATAGTGATCAAAC ATCTTATCTAAGTATTTGCCTTGAAGAAAACAATCGGTTTCAAGTGGAACATTTTTCTCAAGAAGAACTTAAGAAAAAGGTCAGTGACCT TATACAGCTAGTGAAGGAGCTGTATACAGACAACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGG GTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACAC GGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAA TGAGAAGGCCACATTATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGACAGAGCA GGAAGTTTCTGGAGAACACCTTGATGGTAAAACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGTACATTTTGTCCAAACCAACTCATT TTCCAAGCCACATGATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGATGCCTC AGTGCAGACTGTGGCCACGGAGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACCGATCAACACTGC ACTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTGGCAGGCTGCCCTCCTTTCCCTCCCTGGTATTACCAACAGAGA GGCTAAGAAGTCCCGCTTGCCAATCCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCAGGAGGTGGTGAC GCAGCTGCAGAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGAGTTTAAAACTTGTAATAAGCAACTTCACCAAAAGTTAATTCTGGC TGAAGCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACGTTGCTGAATGCTCAGCCCCCTGTGGGAGCAGCCTACCAGGACAGCCCAGG AGAGCAGAAAGGAATTAAAACCACATCTTCTGTCTGGAGAGACAAGGAAATGGACAGTGATCAGCAAAGAAGCTACGAGATTGACTCTGA GATTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGATGTTCTGAGCCCAACTTCAGTAGCTACTTACCT GAGTTCCAAGAGTCAGCCTTCTGCTAAAGTCAGTGTGATGGGGACTGATCAGTCAGAGAGCATTAATACCTCAAATGAGACAGAATACTT AAAACAGAAAATCCATGACTTGGAAACTGAGCTGGAAGGCTACCAGAATTTCATATTTCAGCTTCAAAAGCACTCCCAGTGCAGTGAGGC CATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGACCTTTTC AAGTTTGCACCAAGTGCGATACGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGTGCTGGAGAACCT CAAACAGCAGCTGGAGGAACAGGAATACAAGCTGCAGAAGGAGCAGAATTTGAACATGCAACTTTTCAGTGAGATCCATAATCTGCAGAA TAAGTTCAGAGATCTCTCACCTCCCAGATACGATTCATTAGTTCAGTCCCAAGCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAAGGA TGGCCATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTTGAGGAGTTGCTGCAGGCCAGTGATGTGGATTA CTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCTGGAGAAATTGGAAAAGCTATTTCTCAACGGGGACTCATT CTCACAGTTCCGGTTTGCTGAGGAGAAAGAATGGGATAGTGAAGCTTCTTGTCCAAAACAGAATTCAGCATTTTATGTGGATAGTGAGTT ATTGGTTCGAGCCCTTCAAGAGCTGCCTCTCTGCCTCCGACTCAACGTTGCTGCCGAACTGGTCCAGGGTACAGTTCCTTTAGAGGTTCC TCAGGTGAAACCAAAGAGAACTGATGATGGCAAGGGATTAGGGATGCAGTTAAAGGGGCCCTTGGGGCCTGGAGGAAGGGGGCCCATCTT TGAGCTGAAATCTGTGGCTGCTGGCTGCCCTGTGTTGCTGGGCAAAGACAACCCAAGCCCGGGTCCTTCAAGGGATTCTCAGAAACCCAC TTCCCCACTGCAGTCAGCAGGAGACCATTTGGAAGAAGAACTAGATCTGTTGCTTAATTTAGATGCACCTATAAAAGAGGGAGATAACAT CTTACCAGATCAGACGTCTCAGGACCTGAAATCCAAGGAAGATGGGGAGGTGGTCCAAGAGGAAGAAGTTTGTGCAAAACCATCTGTGAC TGAAGAAAAAAACATGGAACCTGAGCAACCAAGTACCTCCAAAAATGTTACCGAGGAAGAGCTGGAAGACTGGTTGGACAGCATGATTTC CTAAAAAGGGGAAAAAAAGTGCCTGAAGCAAATCTTGGTTGCCTTCTAACGGCAGGTGGGCATAAGGCTGTCCTTCAGGACCAGCCAGTT TACAAGCATGTCTCAAGCTAGTGTGTTCCATTATGCTCACAGCAGTAAATGCCTACCTCTGTGTTTGACATCTGAAAGAATACATTGAAG CAGCTTGTTGCATTTGTTTTTCTGGCTTAGTAATCTAATAGATTTCCTTAAGGGCAGGAGATAGACTCTGGCCCTTGTTTCTAGCCTCCT TCCTTGCAGTGTTTACAACATAGCCAGTGTTTACAGCATAGCAGATGCTGCTGCTGATTAAGAGAATAGATGCAAACAAGGCATGCATTT >15268_15268_4_CDK5RAP2-AVEN_CDK5RAP2_chr9_123199573_ENST00000360822_AVEN_chr15_34168196_ENST00000306730_length(amino acids)=1500AA_BP=1286 MMDLVLEEDVTVPGTLSGCSGLVPSVPDDLDGINPNAGLGNGLLPNVSEETVSPTRARNMKDFENQITELKKENFNLKLRIYFLEERMQQ EFHGPTEHIYKTNIELKVEVESLKRELQEREQLLIKASKAVESLAEAGGSEIQRVKEDARKKVQQVEDLLTKRILLLEKDVTAAQAELEK AFAGTETEKALRLRLESKLSEMKKMHEGDLAMALVLDEKDRLIEELKLSLKSKEALIQCLKEEKSQMACPDENVSSGELRGLCAAPREEK ERETEAAQMEHQKERNSFEERIQALEEDLREKEREIATEKKNSLKRDKAIQGLTMALKSKEKKVEELNSEIEKLSAAFAKAREALQKAQT QEFQGSEDYETALSGKEALSAALRSQNLTKSTENHRLRRSIKKITQELSDLQQERERLEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEV NEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKDLEVIQQNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIF SKEKKQSSDYEELIQVLKKEQDIYTHLVKSLQESDSINNLQAELNKIFALRKQLEQDVLSYQNLRKTLEEQISEIRRREEESFSLYSDQT SYLSICLEENNRFQVEHFSQEELKKKVSDLIQLVKELYTDNQHLKKTIFDLSCMGFQGNGFPDRLASTEQTEIMKDLSKGGCKNGYLRHT ESKISDCDGAHAPGCLEEGAFINLLAPLFNEKATLLLESRPDLLKVVRELLLGQLFLTEQEVSGEHLDGKTEKTPKQKGELVHFVQTNSF SKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVATEGDLLRFKHEATREAWEEKPINTALSAEHRPENLHGVPGWQAALLSLPGITNRE AKKSRLPILIKPSRSLGNMYRLPATQEVVTQLQSQILELQGELKEFKTCNKQLHQKLILAEAVMEGRPTPDKTLLNAQPPVGAAYQDSPG EQKGIKTTSSVWRDKEMDSDQQRSYEIDSEICPPDDLASLPSCKENPEDVLSPTSVATYLSSKSQPSAKVSVMGTDQSESINTSNETEYL KQKIHDLETELEGYQNFIFQLQKHSQCSEAIITVLCGTEGAQDGLSKPKNGSDGEEMTFSSLHQVRYVKHVKILGPLAPEMIDSRVLENL KQQLEEQEYKLQKEQNLNMQLFSEIHNLQNKFRDLSPPRYDSLVQSQARELSLQRQQIKDGHGICVISRQHMNTMIKAFEELLQASDVDY CVAEGFQEQLNQCAELLEKLEKLFLNGDSFSQFRFAEEKEWDSEASCPKQNSAFYVDSELLVRALQELPLCLRLNVAAELVQGTVPLEVP QVKPKRTDDGKGLGMQLKGPLGPGGRGPIFELKSVAAGCPVLLGKDNPSPGPSRDSQKPTSPLQSAGDHLEEELDLLLNLDAPIKEGDNI -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CDK5RAP2-AVEN |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000349780 | - | 25 | 38 | 926_1208 | 1318.3333333333333 | 1894.0 | MAPRE1 |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000359309 | - | 24 | 37 | 926_1208 | 1277.3333333333333 | 1853.0 | MAPRE1 |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000360190 | - | 25 | 37 | 926_1208 | 1318.3333333333333 | 1815.0 | MAPRE1 |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000360822 | - | 24 | 37 | 926_1208 | 1286.3333333333333 | 1862.0 | MAPRE1 |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000349780 | - | 25 | 38 | 58_196 | 1318.3333333333333 | 1894.0 | NCKAP5L |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000359309 | - | 24 | 37 | 58_196 | 1277.3333333333333 | 1853.0 | NCKAP5L |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000360190 | - | 25 | 37 | 58_196 | 1318.3333333333333 | 1815.0 | NCKAP5L |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000360822 | - | 24 | 37 | 58_196 | 1286.3333333333333 | 1862.0 | NCKAP5L |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000349780 | - | 25 | 38 | 1726_1768 | 1318.3333333333333 | 1894.0 | CDK5R1 |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000359309 | - | 24 | 37 | 1726_1768 | 1277.3333333333333 | 1853.0 | CDK5R1 |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000360190 | - | 25 | 37 | 1726_1768 | 1318.3333333333333 | 1815.0 | CDK5R1 |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000360822 | - | 24 | 37 | 1726_1768 | 1286.3333333333333 | 1862.0 | CDK5R1 |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000349780 | - | 25 | 38 | 1726_1893 | 1318.3333333333333 | 1894.0 | PCNT and AKAP9 |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000359309 | - | 24 | 37 | 1726_1893 | 1277.3333333333333 | 1853.0 | PCNT and AKAP9 |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000360190 | - | 25 | 37 | 1726_1893 | 1318.3333333333333 | 1815.0 | PCNT and AKAP9 |
| Hgene | CDK5RAP2 | chr9:123199573 | chr15:34168196 | ENST00000360822 | - | 24 | 37 | 1726_1893 | 1286.3333333333333 | 1862.0 | PCNT and AKAP9 |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CDK5RAP2-AVEN |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CDK5RAP2-AVEN |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | C0007131 | Non-Small Cell Lung Carcinoma | 1 | CTD_human |
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