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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:PLEKHG5-TNFRSF8 (FusionGDB2 ID:HG57449TG943) |
Fusion Gene Summary for PLEKHG5-TNFRSF8 |
Fusion gene summary |
Fusion gene information | Fusion gene name: PLEKHG5-TNFRSF8 | Fusion gene ID: hg57449tg943 | Hgene | Tgene | Gene symbol | PLEKHG5 | TNFRSF8 | Gene ID | 57449 | 943 |
Gene name | pleckstrin homology and RhoGEF domain containing G5 | TNF receptor superfamily member 8 | |
Synonyms | CMTRIC|DSMA4|GEF720|Syx|Tech | CD30|D1S166E|Ki-1 | |
Cytomap | ('PLEKHG5')('TNFRSF8') 1p36.31 | 1p36.22 | |
Type of gene | protein-coding | protein-coding | |
Description | pleckstrin homology domain-containing family G member 5NFkB activating proteinPH domain-containing family G member 5guanine nucleotide exchange factor 720novel PH domain-containing proteinpleckstrin homology domain containing, family G (with RhoGef d | tumor necrosis factor receptor superfamily member 8CD30L receptorKi-1 antigencytokine receptor CD30lymphocyte activation antigen CD30 | |
Modification date | 20200320 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000377732, ENST00000377740, ENST00000377748, ENST00000400915, ENST00000537245, ENST00000377737, ENST00000544978, ENST00000340850, ENST00000377725, ENST00000377728, ENST00000400913, ENST00000535355, | ||
Fusion gene scores | * DoF score | 4 X 4 X 4=64 | 5 X 6 X 5=150 |
# samples | 5 | 5 | |
** MAII score | log2(5/64*10)=-0.356143810225275 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/150*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PLEKHG5 [Title/Abstract] AND TNFRSF8 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | PLEKHG5(6556553)-TNFRSF8(12202344), # samples:1 PLEKHG5(6556553)-TNFRSF8(12198286), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | PLEKHG5-TNFRSF8 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. PLEKHG5-TNFRSF8 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. PLEKHG5-TNFRSF8 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. PLEKHG5-TNFRSF8 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. PLEKHG5-TNFRSF8 seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | TNFRSF8 | GO:0042535 | positive regulation of tumor necrosis factor biosynthetic process | 16108830 |
Tgene | TNFRSF8 | GO:0043065 | positive regulation of apoptotic process | 16108830 |
Tgene | TNFRSF8 | GO:0045556 | positive regulation of TRAIL biosynthetic process | 16108830 |
Fusion gene breakpoints across PLEKHG5 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across TNFRSF8 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-MP-A4SW-01A | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
ChimerDB4 | LUAD | TCGA-MP-A4SW-01A | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
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Fusion Gene ORF analysis for PLEKHG5-TNFRSF8 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-3UTR | ENST00000377732 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5CDS-3UTR | ENST00000377740 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5CDS-3UTR | ENST00000377748 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5CDS-3UTR | ENST00000400915 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5CDS-3UTR | ENST00000537245 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5CDS-5UTR | ENST00000377732 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-5UTR | ENST00000377740 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-5UTR | ENST00000377748 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-5UTR | ENST00000400915 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-5UTR | ENST00000537245 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-intron | ENST00000377732 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-intron | ENST00000377740 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-intron | ENST00000377748 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-intron | ENST00000400915 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-intron | ENST00000537245 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-3CDS | ENST00000377737 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-3CDS | ENST00000377737 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3CDS | ENST00000377737 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3CDS | ENST00000377737 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-3CDS | ENST00000377737 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3CDS | ENST00000544978 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-3CDS | ENST00000544978 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3CDS | ENST00000544978 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3CDS | ENST00000544978 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-3CDS | ENST00000544978 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3UTR | ENST00000377737 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3UTR | ENST00000544978 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-5UTR | ENST00000377737 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-5UTR | ENST00000544978 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-intron | ENST00000377737 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-intron | ENST00000544978 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
Frame-shift | ENST00000377732 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377732 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377732 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377740 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377740 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377740 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377748 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377748 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377748 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000400915 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000400915 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000400915 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000537245 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000537245 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000537245 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
In-frame | ENST00000377732 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000377732 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000377740 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000377740 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000377748 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000377748 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000400915 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000400915 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000537245 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000537245 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000340850 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000340850 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000340850 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000340850 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000340850 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377725 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000377725 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377725 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377725 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000377725 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377728 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000377728 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377728 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377728 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000377728 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000400913 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000400913 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000400913 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000400913 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000400913 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000535355 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000535355 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000535355 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000535355 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000535355 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3UTR | ENST00000340850 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3UTR | ENST00000377725 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3UTR | ENST00000377728 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3UTR | ENST00000400913 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3UTR | ENST00000535355 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-5UTR | ENST00000340850 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-5UTR | ENST00000377725 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-5UTR | ENST00000377728 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-5UTR | ENST00000400913 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-5UTR | ENST00000535355 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-intron | ENST00000340850 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-intron | ENST00000377725 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-intron | ENST00000377728 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-intron | ENST00000400913 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-intron | ENST00000535355 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000377748 | PLEKHG5 | chr1 | 6556553 | - | ENST00000263932 | TNFRSF8 | chr1 | 12198286 | + | 2771 | 642 | 438 | 1094 | 218 |
ENST00000377748 | PLEKHG5 | chr1 | 6556553 | - | ENST00000417814 | TNFRSF8 | chr1 | 12198286 | + | 1678 | 642 | 438 | 1091 | 217 |
ENST00000377732 | PLEKHG5 | chr1 | 6556553 | - | ENST00000263932 | TNFRSF8 | chr1 | 12198286 | + | 2333 | 204 | 15 | 656 | 213 |
ENST00000377732 | PLEKHG5 | chr1 | 6556553 | - | ENST00000417814 | TNFRSF8 | chr1 | 12198286 | + | 1240 | 204 | 15 | 653 | 212 |
ENST00000400915 | PLEKHG5 | chr1 | 6556553 | - | ENST00000263932 | TNFRSF8 | chr1 | 12198286 | + | 2277 | 148 | 67 | 600 | 177 |
ENST00000400915 | PLEKHG5 | chr1 | 6556553 | - | ENST00000417814 | TNFRSF8 | chr1 | 12198286 | + | 1184 | 148 | 67 | 597 | 176 |
ENST00000377740 | PLEKHG5 | chr1 | 6556553 | - | ENST00000263932 | TNFRSF8 | chr1 | 12198286 | + | 2823 | 694 | 490 | 1146 | 218 |
ENST00000377740 | PLEKHG5 | chr1 | 6556553 | - | ENST00000417814 | TNFRSF8 | chr1 | 12198286 | + | 1730 | 694 | 490 | 1143 | 217 |
ENST00000537245 | PLEKHG5 | chr1 | 6556553 | - | ENST00000263932 | TNFRSF8 | chr1 | 12198286 | + | 2344 | 215 | 65 | 667 | 200 |
ENST00000537245 | PLEKHG5 | chr1 | 6556553 | - | ENST00000417814 | TNFRSF8 | chr1 | 12198286 | + | 1251 | 215 | 65 | 664 | 199 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000377748 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + | 0.009907883 | 0.9900921 |
ENST00000377748 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + | 0.014892456 | 0.9851075 |
ENST00000377732 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + | 0.019401288 | 0.9805987 |
ENST00000377732 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + | 0.009944749 | 0.9900552 |
ENST00000400915 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + | 0.008668623 | 0.99133134 |
ENST00000400915 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + | 0.00667193 | 0.9933281 |
ENST00000377740 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + | 0.013230377 | 0.98676956 |
ENST00000377740 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + | 0.019239746 | 0.9807602 |
ENST00000537245 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + | 0.013414326 | 0.9865856 |
ENST00000537245 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + | 0.011713862 | 0.9882861 |
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Fusion Genomic Features for PLEKHG5-TNFRSF8 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
PLEKHG5 | chr1 | 6556552 | - | TNFRSF8 | chr1 | 12202343 | + | 7.71E-08 | 0.9999999 |
PLEKHG5 | chr1 | 6556552 | - | TNFRSF8 | chr1 | 12198288 | + | 8.60E-08 | 0.9999999 |
PLEKHG5 | chr1 | 6556552 | - | TNFRSF8 | chr1 | 12202343 | + | 7.71E-08 | 0.9999999 |
PLEKHG5 | chr1 | 6556552 | - | TNFRSF8 | chr1 | 12198288 | + | 8.60E-08 | 0.9999999 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for PLEKHG5-TNFRSF8 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:6556553/chr1:12202344) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
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FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377748 | - | 2 | 22 | 38_43 | 48 | 1084.0 | Compositional bias | Note=Poly-Glu |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000537245 | - | 2 | 22 | 38_43 | 50 | 1086.0 | Compositional bias | Note=Poly-Glu |
Tgene | TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | 2 | 5 | 347_377 | 0 | 133.0 | Compositional bias | Note=Pro/Ser/Thr-rich | |
Tgene | TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | 2 | 5 | 107_150 | 0 | 133.0 | Repeat | Note=TNFR-Cys 3 | |
Tgene | TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | 2 | 5 | 205_241 | 0 | 133.0 | Repeat | Note=TNFR-Cys 4 | |
Tgene | TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | 2 | 5 | 243_281 | 0 | 133.0 | Repeat | Note=TNFR-Cys 5 | |
Tgene | TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | 2 | 5 | 282_325 | 0 | 133.0 | Repeat | Note=TNFR-Cys 6 | |
Tgene | TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | 2 | 5 | 28_66 | 0 | 133.0 | Repeat | Note=TNFR-Cys 1 | |
Tgene | TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | 2 | 5 | 68_106 | 0 | 133.0 | Repeat | Note=TNFR-Cys 2 | |
Tgene | TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | 2 | 5 | 19_385 | 0 | 133.0 | Topological domain | Extracellular | |
Tgene | TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | 2 | 5 | 407_595 | 0 | 133.0 | Topological domain | Cytoplasmic | |
Tgene | TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | 2 | 5 | 386_406 | 0 | 133.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000340850 | - | 1 | 21 | 38_43 | 0 | 1007.0 | Compositional bias | Note=Poly-Glu |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377725 | - | 1 | 22 | 38_43 | 0 | 1020.6666666666666 | Compositional bias | Note=Poly-Glu |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377728 | - | 1 | 21 | 38_43 | 0 | 1007.0 | Compositional bias | Note=Poly-Glu |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377732 | - | 1 | 21 | 38_43 | 8 | 1044.0 | Compositional bias | Note=Poly-Glu |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377737 | - | 2 | 22 | 38_43 | 0 | 1007.0 | Compositional bias | Note=Poly-Glu |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400913 | - | 1 | 21 | 38_43 | 0 | 1007.0 | Compositional bias | Note=Poly-Glu |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400915 | - | 2 | 22 | 38_43 | 27 | 1063.0 | Compositional bias | Note=Poly-Glu |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000535355 | - | 1 | 21 | 38_43 | 0 | 1076.0 | Compositional bias | Note=Poly-Glu |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000544978 | - | 2 | 22 | 38_43 | 0 | 931.0 | Compositional bias | Note=Poly-Glu |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000340850 | - | 1 | 21 | 336_528 | 0 | 1007.0 | Domain | DH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000340850 | - | 1 | 21 | 584_684 | 0 | 1007.0 | Domain | PH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377725 | - | 1 | 22 | 336_528 | 0 | 1020.6666666666666 | Domain | DH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377725 | - | 1 | 22 | 584_684 | 0 | 1020.6666666666666 | Domain | PH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377728 | - | 1 | 21 | 336_528 | 0 | 1007.0 | Domain | DH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377728 | - | 1 | 21 | 584_684 | 0 | 1007.0 | Domain | PH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377732 | - | 1 | 21 | 336_528 | 8 | 1044.0 | Domain | DH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377732 | - | 1 | 21 | 584_684 | 8 | 1044.0 | Domain | PH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377737 | - | 2 | 22 | 336_528 | 0 | 1007.0 | Domain | DH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377737 | - | 2 | 22 | 584_684 | 0 | 1007.0 | Domain | PH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377748 | - | 2 | 22 | 336_528 | 48 | 1084.0 | Domain | DH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377748 | - | 2 | 22 | 584_684 | 48 | 1084.0 | Domain | PH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400913 | - | 1 | 21 | 336_528 | 0 | 1007.0 | Domain | DH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400913 | - | 1 | 21 | 584_684 | 0 | 1007.0 | Domain | PH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400915 | - | 2 | 22 | 336_528 | 27 | 1063.0 | Domain | DH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400915 | - | 2 | 22 | 584_684 | 27 | 1063.0 | Domain | PH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000535355 | - | 1 | 21 | 336_528 | 0 | 1076.0 | Domain | DH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000535355 | - | 1 | 21 | 584_684 | 0 | 1076.0 | Domain | PH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000537245 | - | 2 | 22 | 336_528 | 50 | 1086.0 | Domain | DH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000537245 | - | 2 | 22 | 584_684 | 50 | 1086.0 | Domain | PH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000544978 | - | 2 | 22 | 336_528 | 0 | 931.0 | Domain | DH |
Hgene | PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000544978 | - | 2 | 22 | 584_684 | 0 | 931.0 | Domain | PH |
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Fusion Gene Sequence for PLEKHG5-TNFRSF8 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>66279_66279_1_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377732_TNFRSF8_chr1_12198286_ENST00000263932_length(transcript)=2333nt_BP=204nt GGACGCTGACCTCTTTTGAAGGGAGGACTGAGGAGATCACCCCACCCCTCCTCCGGTTGGGAGGCCAGTGGGGCCCAGGGGAGCCTGGGT GCCCCGCTGACTGATGCCCTCTGCTCCTCCCCTGCAGACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGC ATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCA CTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCC AGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTG GGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACC CCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCC TTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACT GTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCT GGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGG ACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGC ATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTC CCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCC TGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAGCTGGCACTGTCTCTGCTGCAGCGGCCACACTGTACTC TGCACTGGTGTGAGGGCCCCTGCCTGGACTGTGGGACCCTCCTGGTGCTGCCCACCTTCCCTGTCCTGTAGCCCCCTCGGTGGGCCCAGG GCCTAGGGCCCAGGATCAAGTCACTCATCTCAGAATGTCCCCACCAATCCCCGCCACAGCAGGCGCCTCGGGTCCCAGATGTCTGCAGCC CTCAGCAGCTGCAGACCGCCCCTCACCAACCCAGAGAACCTGCTTTACTTTGCCCAGGGACTTCCTCCCCATGTGAACATGGGGAACTTC GGGCCCTGCCTGGAGTCCTTGACCGCTCTCTGTGGGCCCCACCCACTCTGTCCTGGGAAATGAAGAAGCATCTTCCTTAGGTCTGCCCTG CTTGCAAATCCACTAGCACCGACCCCACCACCTGGTTCCGGCTCTGCACGCTTTGGGGTGTGGATGTCGAGAGGCACCACGGCCTCACCC AGGCATCTGCTTTACTCTGGACCATAGGAAACAAGACCGTTTGGAGGTTTCATCAGGATTTTGGGTTTTTCACATTTCACGCTAAGGAGT AGTGGCCCTGACTTCCGGTCGGCTGGCCAGCTGACTCCCTAGGGCCTTCAGACGTGTATGCAAATGAGTGATGGATAAGGATGAGTCTTG GAGTTGCGGGCAGCCTGGAGACTCGTGGACTTACCGCCTGGAGGCAGGCCCGGGAAGGCTGCTGTTTACTCATCGGGCAGCCACGTGCTC TCTGGAGGAAGTGATAGTTTCTGAAACCGCTCAGATGTTTTGGGGAAAGTTGGAGAAGCCGTGGCCTTGCGAGAGGTGGTTACACCAGAA CCTGGACATTGGCCAGAAGAAGCTTAAGTGGGCAGACACTGTTTGCCCAGTGTTTGTGCAAGGATGGAGTGGGTGTCTCTGCATCACCCA CAGCCGCAGCTGTAAGGCACGCTGGAAGGCACACGCCTGCCAGGCAGGGCAGTCTGGCGCCCATGATGGGAGGGATTGACATGTTTCAAC >66279_66279_1_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377732_TNFRSF8_chr1_12198286_ENST00000263932_length(amino acids)=213AA_BP=63 MKGGLRRSPHPSSGWEASGAQGSLGAPLTDALCSSPADDQSPAEKKGLRCQNPACMDKGRAAKQLRSGASVTEPVAEERGLMSQPLMETC HSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPE -------------------------------------------------------------- >66279_66279_2_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377732_TNFRSF8_chr1_12198286_ENST00000417814_length(transcript)=1240nt_BP=204nt GGACGCTGACCTCTTTTGAAGGGAGGACTGAGGAGATCACCCCACCCCTCCTCCGGTTGGGAGGCCAGTGGGGCCCAGGGGAGCCTGGGT GCCCCGCTGACTGATGCCCTCTGCTCCTCCCCTGCAGACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGC ATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTG ATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGG GACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGG ACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCC CACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTG CCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTT GGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGT GGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACT GGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATC AGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCT GGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGT >66279_66279_2_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377732_TNFRSF8_chr1_12198286_ENST00000417814_length(amino acids)=212AA_BP=63 MKGGLRRSPHPSSGWEASGAQGSLGAPLTDALCSSPADDQSPAEKKGLRCQNPACMDKGRAAKLRSGASVTEPVAEERGLMSQPLMETCH SVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPEQ -------------------------------------------------------------- >66279_66279_3_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377740_TNFRSF8_chr1_12198286_ENST00000263932_length(transcript)=2823nt_BP=694nt CTTGATCTCCCGCTGTGACCAGCCCCTCTCTGCCTGGCAGGGGAAAGCCACCAAACTAAGGCCTTCCTGGTAGCCAAGGAGCCCAGCAGA GGGGCTGCTGCTGGCTGCTGGGATTGCAGAGGCCGGGGTCTCTGTGGTGTTGCTTTCCTGGAAAGGAGGGACGGCACCTCCAGGGCAGCC AGCAGTGTGGGAGCCCATTCCAGGGCGCAAATGGGCACTCAGGAATGGAAAATCCAAGAAGGAACCAACCACCAACAAGGAAATGCAGTG TGAGCGGCGGCTGCGAAGTCTGTGCCTTCAAATATACAGCGCCCAGGGGACCTGTGTTGGACGGGGAGCAAATTGGCAGGGCTGAGAGCG CCTTGGTTTTCTGTGCAGACAGGTCCAGCTGCAGAAATTAAGACTGGGGCTGAGTCGGGGAGAAGCCTTCCATGTTGAGATGGCAACTGG GCAAAGCAGGACGGAGACCTGTGTGTCTGATTAGAGAGGCCTGTGGCATTGGCATGTGGCTGGAGGTCCAGGCAGGGTGCCACCACCGCA GAGGTCAAGCATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGCTGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCC CGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGAC AGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCC GCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGAT TGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGC AGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGA TGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAG GAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTC CAGCATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCT AGGGGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGAT GGGCACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAG GCCAGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGT TACTGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGT CAGCTGGCACTGTCTCTGCTGCAGCGGCCACACTGTACTCTGCACTGGTGTGAGGGCCCCTGCCTGGACTGTGGGACCCTCCTGGTGCTG CCCACCTTCCCTGTCCTGTAGCCCCCTCGGTGGGCCCAGGGCCTAGGGCCCAGGATCAAGTCACTCATCTCAGAATGTCCCCACCAATCC CCGCCACAGCAGGCGCCTCGGGTCCCAGATGTCTGCAGCCCTCAGCAGCTGCAGACCGCCCCTCACCAACCCAGAGAACCTGCTTTACTT TGCCCAGGGACTTCCTCCCCATGTGAACATGGGGAACTTCGGGCCCTGCCTGGAGTCCTTGACCGCTCTCTGTGGGCCCCACCCACTCTG TCCTGGGAAATGAAGAAGCATCTTCCTTAGGTCTGCCCTGCTTGCAAATCCACTAGCACCGACCCCACCACCTGGTTCCGGCTCTGCACG CTTTGGGGTGTGGATGTCGAGAGGCACCACGGCCTCACCCAGGCATCTGCTTTACTCTGGACCATAGGAAACAAGACCGTTTGGAGGTTT CATCAGGATTTTGGGTTTTTCACATTTCACGCTAAGGAGTAGTGGCCCTGACTTCCGGTCGGCTGGCCAGCTGACTCCCTAGGGCCTTCA GACGTGTATGCAAATGAGTGATGGATAAGGATGAGTCTTGGAGTTGCGGGCAGCCTGGAGACTCGTGGACTTACCGCCTGGAGGCAGGCC CGGGAAGGCTGCTGTTTACTCATCGGGCAGCCACGTGCTCTCTGGAGGAAGTGATAGTTTCTGAAACCGCTCAGATGTTTTGGGGAAAGT TGGAGAAGCCGTGGCCTTGCGAGAGGTGGTTACACCAGAACCTGGACATTGGCCAGAAGAAGCTTAAGTGGGCAGACACTGTTTGCCCAG TGTTTGTGCAAGGATGGAGTGGGTGTCTCTGCATCACCCACAGCCGCAGCTGTAAGGCACGCTGGAAGGCACACGCCTGCCAGGCAGGGC AGTCTGGCGCCCATGATGGGAGGGATTGACATGTTTCAACAAAATAATGCACTTCCTTACCTAGTGGCCCTTCACACAACTTTTGAATCT >66279_66279_3_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377740_TNFRSF8_chr1_12198286_ENST00000263932_length(amino acids)=218AA_BP=68 MWHWHVAGGPGRVPPPQRSSMNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGRAAKQLRSGASVTEPVAEERGLMSQP LMETCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHT -------------------------------------------------------------- >66279_66279_4_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377740_TNFRSF8_chr1_12198286_ENST00000417814_length(transcript)=1730nt_BP=694nt CTTGATCTCCCGCTGTGACCAGCCCCTCTCTGCCTGGCAGGGGAAAGCCACCAAACTAAGGCCTTCCTGGTAGCCAAGGAGCCCAGCAGA GGGGCTGCTGCTGGCTGCTGGGATTGCAGAGGCCGGGGTCTCTGTGGTGTTGCTTTCCTGGAAAGGAGGGACGGCACCTCCAGGGCAGCC AGCAGTGTGGGAGCCCATTCCAGGGCGCAAATGGGCACTCAGGAATGGAAAATCCAAGAAGGAACCAACCACCAACAAGGAAATGCAGTG TGAGCGGCGGCTGCGAAGTCTGTGCCTTCAAATATACAGCGCCCAGGGGACCTGTGTTGGACGGGGAGCAAATTGGCAGGGCTGAGAGCG CCTTGGTTTTCTGTGCAGACAGGTCCAGCTGCAGAAATTAAGACTGGGGCTGAGTCGGGGAGAAGCCTTCCATGTTGAGATGGCAACTGG GCAAAGCAGGACGGAGACCTGTGTGTCTGATTAGAGAGGCCTGTGGCATTGGCATGTGGCTGGAGGTCCAGGCAGGGTGCCACCACCGCA GAGGTCAAGCATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGCTGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCC CGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGA ACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCT GCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGA GAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGA GCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGT CATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAG GGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAG CATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGG GGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGG CACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCC AGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTAC TGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAG >66279_66279_4_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377740_TNFRSF8_chr1_12198286_ENST00000417814_length(amino acids)=217AA_BP=68 MWHWHVAGGPGRVPPPQRSSMNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGRAAKLRSGASVTEPVAEERGLMSQPL METCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTP -------------------------------------------------------------- >66279_66279_5_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377748_TNFRSF8_chr1_12198286_ENST00000263932_length(transcript)=2771nt_BP=642nt AAACTAAGGCCTTCCTGGTAGCCAAGGAGCCCAGCAGAGGGGCTGCTGCTGGCTGCTGGGATTGCAGAGGCCGGGGTCTCTGTGGTGTTG CTTTCCTGGAAAGGAGGGACGGCACCTCCAGGGCAGCCAGCAGTGTGGGAGCCCATTCCAGGGCGCAAATGGGCACTCAGGAATGGAAAA TCCAAGAAGGAACCAACCACCAACAAGGAAATGCAGTGTGAGCGGCGGCTGCGAAGTCTGTGCCTTCAAATATACAGCGCCCAGGGGACC TGTGTTGGACGGGGAGCAAATTGGCAGGGCTGAGAGCGCCTTGGTTTTCTGTGCAGACAGGTCCAGCTGCAGAAATTAAGACTGGGGCTG AGTCGGGGAGAAGCCTTCCATGTTGAGATGGCAACTGGGCAAAGCAGGACGGAGACCTGTGTGTCTGATTAGAGAGGCCTGTGGCATTGG CATGTGGCTGGAGGTCCAGGCAGGGTGCCACCACCGCAGAGGTCAAGCATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGC TGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGG CGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACC TGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCT GAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAG GCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCC GAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCT GCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAG GTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGC TTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAG CAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAA CCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAG AGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTC TCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAGCTGGCACTGTCTCTGCTGCAGCGGCCACACTGTACTCTGCACTGGTGTG AGGGCCCCTGCCTGGACTGTGGGACCCTCCTGGTGCTGCCCACCTTCCCTGTCCTGTAGCCCCCTCGGTGGGCCCAGGGCCTAGGGCCCA GGATCAAGTCACTCATCTCAGAATGTCCCCACCAATCCCCGCCACAGCAGGCGCCTCGGGTCCCAGATGTCTGCAGCCCTCAGCAGCTGC AGACCGCCCCTCACCAACCCAGAGAACCTGCTTTACTTTGCCCAGGGACTTCCTCCCCATGTGAACATGGGGAACTTCGGGCCCTGCCTG GAGTCCTTGACCGCTCTCTGTGGGCCCCACCCACTCTGTCCTGGGAAATGAAGAAGCATCTTCCTTAGGTCTGCCCTGCTTGCAAATCCA CTAGCACCGACCCCACCACCTGGTTCCGGCTCTGCACGCTTTGGGGTGTGGATGTCGAGAGGCACCACGGCCTCACCCAGGCATCTGCTT TACTCTGGACCATAGGAAACAAGACCGTTTGGAGGTTTCATCAGGATTTTGGGTTTTTCACATTTCACGCTAAGGAGTAGTGGCCCTGAC TTCCGGTCGGCTGGCCAGCTGACTCCCTAGGGCCTTCAGACGTGTATGCAAATGAGTGATGGATAAGGATGAGTCTTGGAGTTGCGGGCA GCCTGGAGACTCGTGGACTTACCGCCTGGAGGCAGGCCCGGGAAGGCTGCTGTTTACTCATCGGGCAGCCACGTGCTCTCTGGAGGAAGT GATAGTTTCTGAAACCGCTCAGATGTTTTGGGGAAAGTTGGAGAAGCCGTGGCCTTGCGAGAGGTGGTTACACCAGAACCTGGACATTGG CCAGAAGAAGCTTAAGTGGGCAGACACTGTTTGCCCAGTGTTTGTGCAAGGATGGAGTGGGTGTCTCTGCATCACCCACAGCCGCAGCTG TAAGGCACGCTGGAAGGCACACGCCTGCCAGGCAGGGCAGTCTGGCGCCCATGATGGGAGGGATTGACATGTTTCAACAAAATAATGCAC >66279_66279_5_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377748_TNFRSF8_chr1_12198286_ENST00000263932_length(amino acids)=218AA_BP=68 MWHWHVAGGPGRVPPPQRSSMNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGRAAKQLRSGASVTEPVAEERGLMSQP LMETCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHT -------------------------------------------------------------- >66279_66279_6_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377748_TNFRSF8_chr1_12198286_ENST00000417814_length(transcript)=1678nt_BP=642nt AAACTAAGGCCTTCCTGGTAGCCAAGGAGCCCAGCAGAGGGGCTGCTGCTGGCTGCTGGGATTGCAGAGGCCGGGGTCTCTGTGGTGTTG CTTTCCTGGAAAGGAGGGACGGCACCTCCAGGGCAGCCAGCAGTGTGGGAGCCCATTCCAGGGCGCAAATGGGCACTCAGGAATGGAAAA TCCAAGAAGGAACCAACCACCAACAAGGAAATGCAGTGTGAGCGGCGGCTGCGAAGTCTGTGCCTTCAAATATACAGCGCCCAGGGGACC TGTGTTGGACGGGGAGCAAATTGGCAGGGCTGAGAGCGCCTTGGTTTTCTGTGCAGACAGGTCCAGCTGCAGAAATTAAGACTGGGGCTG AGTCGGGGAGAAGCCTTCCATGTTGAGATGGCAACTGGGCAAAGCAGGACGGAGACCTGTGTGTCTGATTAGAGAGGCCTGTGGCATTGG CATGTGGCTGGAGGTCCAGGCAGGGTGCCACCACCGCAGAGGTCAAGCATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGC TGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGG CGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGC CACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAG CCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCT GAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAG CAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCTGCC TCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAGGTT GGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGCTTG CATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAGCAG TGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAACCA CCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAGAGG TGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTCTCC >66279_66279_6_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000377748_TNFRSF8_chr1_12198286_ENST00000417814_length(amino acids)=217AA_BP=68 MWHWHVAGGPGRVPPPQRSSMNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGRAAKLRSGASVTEPVAEERGLMSQPL METCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTP -------------------------------------------------------------- >66279_66279_7_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000400915_TNFRSF8_chr1_12198286_ENST00000263932_length(transcript)=2277nt_BP=148nt CCCAGTCCCCGGCGTCCCCGGCGCCCCCGCCCGCCGCCCGCCCCCCGCGCGGCACGGGGCCTGCTCCATGGACGACCAGAGCCCCGCTGA AAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAACC CGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCA GGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAA AATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCC CGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCAT GCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGC AGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCAT CTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGA TCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCAC TGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGC TCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGT AAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAGCTG GCACTGTCTCTGCTGCAGCGGCCACACTGTACTCTGCACTGGTGTGAGGGCCCCTGCCTGGACTGTGGGACCCTCCTGGTGCTGCCCACC TTCCCTGTCCTGTAGCCCCCTCGGTGGGCCCAGGGCCTAGGGCCCAGGATCAAGTCACTCATCTCAGAATGTCCCCACCAATCCCCGCCA CAGCAGGCGCCTCGGGTCCCAGATGTCTGCAGCCCTCAGCAGCTGCAGACCGCCCCTCACCAACCCAGAGAACCTGCTTTACTTTGCCCA GGGACTTCCTCCCCATGTGAACATGGGGAACTTCGGGCCCTGCCTGGAGTCCTTGACCGCTCTCTGTGGGCCCCACCCACTCTGTCCTGG GAAATGAAGAAGCATCTTCCTTAGGTCTGCCCTGCTTGCAAATCCACTAGCACCGACCCCACCACCTGGTTCCGGCTCTGCACGCTTTGG GGTGTGGATGTCGAGAGGCACCACGGCCTCACCCAGGCATCTGCTTTACTCTGGACCATAGGAAACAAGACCGTTTGGAGGTTTCATCAG GATTTTGGGTTTTTCACATTTCACGCTAAGGAGTAGTGGCCCTGACTTCCGGTCGGCTGGCCAGCTGACTCCCTAGGGCCTTCAGACGTG TATGCAAATGAGTGATGGATAAGGATGAGTCTTGGAGTTGCGGGCAGCCTGGAGACTCGTGGACTTACCGCCTGGAGGCAGGCCCGGGAA GGCTGCTGTTTACTCATCGGGCAGCCACGTGCTCTCTGGAGGAAGTGATAGTTTCTGAAACCGCTCAGATGTTTTGGGGAAAGTTGGAGA AGCCGTGGCCTTGCGAGAGGTGGTTACACCAGAACCTGGACATTGGCCAGAAGAAGCTTAAGTGGGCAGACACTGTTTGCCCAGTGTTTG TGCAAGGATGGAGTGGGTGTCTCTGCATCACCCACAGCCGCAGCTGTAAGGCACGCTGGAAGGCACACGCCTGCCAGGCAGGGCAGTCTG GCGCCCATGATGGGAGGGATTGACATGTTTCAACAAAATAATGCACTTCCTTACCTAGTGGCCCTTCACACAACTTTTGAATCTCTAAAA >66279_66279_7_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000400915_TNFRSF8_chr1_12198286_ENST00000263932_length(amino acids)=177AA_BP=27 MDDQSPAEKKGLRCQNPACMDKGRAAKQLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTE -------------------------------------------------------------- >66279_66279_8_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000400915_TNFRSF8_chr1_12198286_ENST00000417814_length(transcript)=1184nt_BP=148nt CCCAGTCCCCGGCGTCCCCGGCGCCCCCGCCCGCCGCCCGCCCCCCGCGCGGCACGGGGCCTGCTCCATGGACGACCAGAGCCCCGCTGA AAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGT CGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGA TGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAAT CTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGA GTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCT CTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGC AGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTA GTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCC GGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGC CGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCC CGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAA TGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAGCTGGCA >66279_66279_8_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000400915_TNFRSF8_chr1_12198286_ENST00000417814_length(amino acids)=176AA_BP=27 MDDQSPAEKKGLRCQNPACMDKGRAAKLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEH -------------------------------------------------------------- >66279_66279_9_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000537245_TNFRSF8_chr1_12198286_ENST00000263932_length(transcript)=2344nt_BP=215nt ACCGCGGTGCACTCCAGCCCCCAGGAAGAGAGGCAGCTTGGAGGGGGCCAAATTCAGGGTCAAAGATGAGTCTTGGGGAACGGGGGTCGC CCCAGACCTTCGGGGGCTCCTCTGTCTCTAAAGGGAGCGATGCAGGGCACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGA ACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAA TGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCC CCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACA CCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGG CGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGA AAGAAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCC AGGATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCAC TGCAGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGAC AGTCCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCA GAGCCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTAC TCTCCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATG GAGCCAGTGCCTGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAGCTGGCACTGTCTCTGCTGCAGCGGCC ACACTGTACTCTGCACTGGTGTGAGGGCCCCTGCCTGGACTGTGGGACCCTCCTGGTGCTGCCCACCTTCCCTGTCCTGTAGCCCCCTCG GTGGGCCCAGGGCCTAGGGCCCAGGATCAAGTCACTCATCTCAGAATGTCCCCACCAATCCCCGCCACAGCAGGCGCCTCGGGTCCCAGA TGTCTGCAGCCCTCAGCAGCTGCAGACCGCCCCTCACCAACCCAGAGAACCTGCTTTACTTTGCCCAGGGACTTCCTCCCCATGTGAACA TGGGGAACTTCGGGCCCTGCCTGGAGTCCTTGACCGCTCTCTGTGGGCCCCACCCACTCTGTCCTGGGAAATGAAGAAGCATCTTCCTTA GGTCTGCCCTGCTTGCAAATCCACTAGCACCGACCCCACCACCTGGTTCCGGCTCTGCACGCTTTGGGGTGTGGATGTCGAGAGGCACCA CGGCCTCACCCAGGCATCTGCTTTACTCTGGACCATAGGAAACAAGACCGTTTGGAGGTTTCATCAGGATTTTGGGTTTTTCACATTTCA CGCTAAGGAGTAGTGGCCCTGACTTCCGGTCGGCTGGCCAGCTGACTCCCTAGGGCCTTCAGACGTGTATGCAAATGAGTGATGGATAAG GATGAGTCTTGGAGTTGCGGGCAGCCTGGAGACTCGTGGACTTACCGCCTGGAGGCAGGCCCGGGAAGGCTGCTGTTTACTCATCGGGCA GCCACGTGCTCTCTGGAGGAAGTGATAGTTTCTGAAACCGCTCAGATGTTTTGGGGAAAGTTGGAGAAGCCGTGGCCTTGCGAGAGGTGG TTACACCAGAACCTGGACATTGGCCAGAAGAAGCTTAAGTGGGCAGACACTGTTTGCCCAGTGTTTGTGCAAGGATGGAGTGGGTGTCTC TGCATCACCCACAGCCGCAGCTGTAAGGCACGCTGGAAGGCACACGCCTGCCAGGCAGGGCAGTCTGGCGCCCATGATGGGAGGGATTGA CATGTTTCAACAAAATAATGCACTTCCTTACCTAGTGGCCCTTCACACAACTTTTGAATCTCTAAAAATCCATAAAATCCTTAAAGAACT >66279_66279_9_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000537245_TNFRSF8_chr1_12198286_ENST00000263932_length(amino acids)=200AA_BP=50 MSLGERGSPQTFGGSSVSKGSDAGHDQSPAEKKGLRCQNPACMDKGRAAKQLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPL QDASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPEQETEPPLGSCSDV -------------------------------------------------------------- >66279_66279_10_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000537245_TNFRSF8_chr1_12198286_ENST00000417814_length(transcript)=1251nt_BP=215nt ACCGCGGTGCACTCCAGCCCCCAGGAAGAGAGGCAGCTTGGAGGGGGCCAAATTCAGGGTCAAAGATGAGTCTTGGGGAACGGGGGTCGC CCCAGACCTTCGGGGGCTCCTCTGTCTCTAAAGGGAGCGATGCAGGGCACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGA ACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGA GCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCT CGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCG TGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGG ACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAG AAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGG ATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCACTGC AGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGACAGT CCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCAGAG CCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTACTCT CCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATGGAG >66279_66279_10_PLEKHG5-TNFRSF8_PLEKHG5_chr1_6556553_ENST00000537245_TNFRSF8_chr1_12198286_ENST00000417814_length(amino acids)=199AA_BP=50 MSLGERGSPQTFGGSSVSKGSDAGHDQSPAEKKGLRCQNPACMDKGRAAKLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQ DASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPEQETEPPLGSCSDVM -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for PLEKHG5-TNFRSF8 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for PLEKHG5-TNFRSF8 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for PLEKHG5-TNFRSF8 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PLEKHG5 | C3809309 | CHARCOT-MARIE-TOOTH DISEASE, RECESSIVE INTERMEDIATE C | 3 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Hgene | PLEKHG5 | C0032460 | Polycystic Ovary Syndrome | 1 | CTD_human |
Hgene | PLEKHG5 | C0393541 | Distal Spinal Muscular Atrophy | 1 | GENOMICS_ENGLAND |
Hgene | PLEKHG5 | C1136382 | Sclerocystic Ovaries | 1 | CTD_human |
Hgene | PLEKHG5 | C1970211 | Spinal Muscular Atrophy, Distal, Autosomal Recessive, 4 | 1 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Tgene | C0019829 | Hodgkin Disease | 2 | CTD_human | |
Tgene | C0152266 | Mixed Cellularity Hodgkin Lymphoma | 2 | CTD_human | |
Tgene | C0152267 | Hodgkin lymphoma, lymphocyte depletion | 2 | CTD_human | |
Tgene | C0220597 | Adult Hodgkin Lymphoma | 2 | CTD_human | |
Tgene | C1266194 | Lymphocyte Rich Classical Hodgkin Lymphoma | 2 | CTD_human | |
Tgene | C1334968 | Nodular Lymphocyte Predominant Hodgkin Lymphoma | 2 | CTD_human | |
Tgene | C0345967 | Malignant mesothelioma | 1 | CTD_human |