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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:ARID1B-SNX9 (FusionGDB2 ID:HG57492TG51429) |
Fusion Gene Summary for ARID1B-SNX9 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: ARID1B-SNX9 | Fusion gene ID: hg57492tg51429 | Hgene | Tgene | Gene symbol | ARID1B | SNX9 | Gene ID | 57492 | 51429 |
| Gene name | AT-rich interaction domain 1B | sorting nexin 9 | |
| Synonyms | 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R | SDP1|SH3PX1|SH3PXD3A|WISP | |
| Cytomap | ('ARID1B')('SNX9') 6q25.3 | 6q25.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | AT-rich interactive domain-containing protein 1BARID domain-containing protein 1BAT rich interactive domain 1B (SWI1-like)BRG1-associated factor 250bBRG1-binding protein ELD/OSA1ELD (eyelid)/OSA protein | sorting nexin-9SH3 and PX domain-containing protein 1SH3 and PX domain-containing protein 3AWiskott-Aldrich syndrome protein (WASP) interactor protein | |
| Modification date | 20200320 | 20200313 | |
| UniProtAcc | . | . | |
| Ensembl transtripts involved in fusion gene | ENST00000275248, ENST00000346085, ENST00000350026, ENST00000367148, ENST00000478761, | ||
| Fusion gene scores | * DoF score | 27 X 18 X 14=6804 | 10 X 12 X 6=720 |
| # samples | 31 | 13 | |
| ** MAII score | log2(31/6804*10)=-4.45604302038915 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(13/720*10)=-2.46948528330122 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: ARID1B [Title/Abstract] AND SNX9 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | ARID1B(157150555)-SNX9(158288579), # samples:2 | ||
| Anticipated loss of major functional domain due to fusion event. | ARID1B-SNX9 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ARID1B-SNX9 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ARID1B-SNX9 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ARID1B-SNX9 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | SNX9 | GO:0043547 | positive regulation of GTPase activity | 15703209 |
| Tgene | SNX9 | GO:0045860 | positive regulation of protein kinase activity | 18388313 |
| Tgene | SNX9 | GO:0051044 | positive regulation of membrane protein ectodomain proteolysis | 18353773 |
| Tgene | SNX9 | GO:0060988 | lipid tube assembly | 17948057 |
| Tgene | SNX9 | GO:0065003 | protein-containing complex assembly | 15703209 |
| Tgene | SNX9 | GO:0097320 | plasma membrane tubulation | 18388313 |
| Fusion gene breakpoints across ARID1B (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across SNX9 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene information * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | BRCA | TCGA-BH-A1F6-01A | ARID1B | chr6 | 157150555 | - | SNX9 | chr6 | 158288579 | + |
| ChimerDB4 | BRCA | TCGA-BH-A1F6-01A | ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288579 | + |
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Fusion Gene ORF analysis for ARID1B-SNX9 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000275248 | ENST00000392185 | ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288579 | + |
| In-frame | ENST00000346085 | ENST00000392185 | ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288579 | + |
| In-frame | ENST00000350026 | ENST00000392185 | ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288579 | + |
| In-frame | ENST00000367148 | ENST00000392185 | ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288579 | + |
| intron-3CDS | ENST00000478761 | ENST00000392185 | ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288579 | + |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000350026 | ARID1B | chr6 | 157150555 | + | ENST00000392185 | SNX9 | chr6 | 158288579 | + | 5753 | 1738 | 1 | 3513 | 1170 |
| ENST00000346085 | ARID1B | chr6 | 157150555 | + | ENST00000392185 | SNX9 | chr6 | 158288579 | + | 5753 | 1738 | 1 | 3513 | 1170 |
| ENST00000367148 | ARID1B | chr6 | 157150555 | + | ENST00000392185 | SNX9 | chr6 | 158288579 | + | 5752 | 1737 | 0 | 3512 | 1170 |
| ENST00000275248 | ARID1B | chr6 | 157150555 | + | ENST00000392185 | SNX9 | chr6 | 158288579 | + | 5730 | 1715 | 77 | 3490 | 1137 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000350026 | ENST00000392185 | ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288579 | + | 0.001011588 | 0.99898845 |
| ENST00000346085 | ENST00000392185 | ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288579 | + | 0.001011588 | 0.99898845 |
| ENST00000367148 | ENST00000392185 | ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288579 | + | 0.00100589 | 0.99899405 |
| ENST00000275248 | ENST00000392185 | ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288579 | + | 0.001148022 | 0.998852 |
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Fusion Genomic Features for ARID1B-SNX9 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288578 | + | 4.91E-06 | 0.9999951 |
| ARID1B | chr6 | 157150555 | + | SNX9 | chr6 | 158288578 | + | 4.91E-06 | 0.9999951 |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
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| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for ARID1B-SNX9 |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr6:157150555/chr6:158288579) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | . |
| FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 107_131 | 579 | 2250.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 114_131 | 579 | 2250.0 | Compositional bias | Note=Poly-Gln |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 141_401 | 579 | 2250.0 | Compositional bias | Note=Gly-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 2_47 | 579 | 2250.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 329_493 | 579 | 2250.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 35_57 | 579 | 2250.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 81_104 | 579 | 2250.0 | Compositional bias | Note=His-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 107_131 | 579 | 2237.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 114_131 | 579 | 2237.0 | Compositional bias | Note=Poly-Gln |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 141_401 | 579 | 2237.0 | Compositional bias | Note=Gly-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 2_47 | 579 | 2237.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 329_493 | 579 | 2237.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 35_57 | 579 | 2237.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 81_104 | 579 | 2237.0 | Compositional bias | Note=His-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 107_131 | 579 | 2290.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 114_131 | 579 | 2290.0 | Compositional bias | Note=Poly-Gln |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 141_401 | 579 | 2290.0 | Compositional bias | Note=Gly-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 2_47 | 579 | 2290.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 329_493 | 579 | 2290.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 35_57 | 579 | 2290.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 81_104 | 579 | 2290.0 | Compositional bias | Note=His-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 419_423 | 579 | 2250.0 | Motif | Note=LXXLL |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 419_423 | 579 | 2237.0 | Motif | Note=LXXLL |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 419_423 | 579 | 2290.0 | Motif | Note=LXXLL |
| Tgene | SNX9 | chr6:157150555 | chr6:158288579 | ENST00000392185 | 0 | 18 | 1_62 | 4 | 596.0 | Domain | SH3 | |
| Tgene | SNX9 | chr6:157150555 | chr6:158288579 | ENST00000392185 | 0 | 18 | 250_361 | 4 | 596.0 | Domain | PX | |
| Tgene | SNX9 | chr6:157150555 | chr6:158288579 | ENST00000392185 | 0 | 18 | 392_595 | 4 | 596.0 | Domain | Note=BAR | |
| Tgene | SNX9 | chr6:157150555 | chr6:158288579 | ENST00000392185 | 0 | 18 | 201_213 | 4 | 596.0 | Region | Note=Critical for tubulation activity |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 1034_1037 | 579 | 2250.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 1441_1444 | 579 | 2250.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 1459_1597 | 579 | 2250.0 | Compositional bias | Note=Pro-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 1833_1836 | 579 | 2250.0 | Compositional bias | Note=Poly-Pro |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 574_633 | 579 | 2250.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 684_771 | 579 | 2250.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 932_935 | 579 | 2250.0 | Compositional bias | Note=Poly-Ala |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 1034_1037 | 579 | 2237.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 1441_1444 | 579 | 2237.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 1459_1597 | 579 | 2237.0 | Compositional bias | Note=Pro-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 1833_1836 | 579 | 2237.0 | Compositional bias | Note=Poly-Pro |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 574_633 | 579 | 2237.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 684_771 | 579 | 2237.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 932_935 | 579 | 2237.0 | Compositional bias | Note=Poly-Ala |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 1034_1037 | 579 | 2290.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 1441_1444 | 579 | 2290.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 1459_1597 | 579 | 2290.0 | Compositional bias | Note=Pro-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 1833_1836 | 579 | 2290.0 | Compositional bias | Note=Poly-Pro |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 574_633 | 579 | 2290.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 684_771 | 579 | 2290.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 932_935 | 579 | 2290.0 | Compositional bias | Note=Poly-Ala |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 1053_1144 | 579 | 2250.0 | Domain | ARID |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 1053_1144 | 579 | 2237.0 | Domain | ARID |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 1053_1144 | 579 | 2290.0 | Domain | ARID |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 1358_1377 | 579 | 2250.0 | Motif | Nuclear localization signal |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000346085 | + | 2 | 20 | 2036_2040 | 579 | 2250.0 | Motif | Note=LXXLL |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 1358_1377 | 579 | 2237.0 | Motif | Nuclear localization signal |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000350026 | + | 2 | 19 | 2036_2040 | 579 | 2237.0 | Motif | Note=LXXLL |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 1358_1377 | 579 | 2290.0 | Motif | Nuclear localization signal |
| Hgene | ARID1B | chr6:157150555 | chr6:158288579 | ENST00000367148 | + | 2 | 20 | 2036_2040 | 579 | 2290.0 | Motif | Note=LXXLL |
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Fusion Gene Sequence for ARID1B-SNX9 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >6421_6421_1_ARID1B-SNX9_ARID1B_chr6_157150555_ENST00000275248_SNX9_chr6_158288579_ENST00000392185_length(transcript)=5730nt_BP=1715nt CGGCCGCCGCCGGCACCCACAGCGCCAAGAGCGGCGGCTCCGAGGCGGCTCTCAAGGAGGGTGGAAGCGCCGCCGCGCTGTCCTCCTCCT CCTCCTCCTCCGCGGCGGCAGCGGCGGCATCCTCTTCCTCCTCGTCGGGCCCGGGCTCGGCCATGGAGACGGGGCTGCTCCCCAACCACA AACTGAAAACCGTTGGCGAAGCCCCCGCCGCGCCGCCCCACCAGCAGCACCACCACCACCACCATGCCCACCACCACCACCACCATGCCC ACCACCTCCACCACCACCACGCACTACAGCAGCAGCTAAACCAGTTCCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGC AGCAACAGCAACATCCCATTTCCAACAACAACAGCTTGGGCGGCGCGGGCGGCGGCGCGCCTCAGCCCGGCCCCGACATGGAGCAGCCGC AACATGGAGGCGCCAAGGACAGTGCTGCGGGCGGCCAGGCCGACCCCCCGGGCCCGCCGCTGCTGAGCAAGCCGGGCGACGAGGACGACG CGCCGCCCAAGATGGGGGAGCCGGCGGGCGGCCGCTACGAGCACCCGGGCTTGGGCGCCCTGGGCACGCAGCAGCCGCCGGTCGCCGTGC CCGGGGGCGGCGGCGGCCCGGCGGCCGTCCCGGAGTTTAATAATTACTATGGCAGCGCTGCCCCTGCGAGCGGCGGCCCCGGCGGCCGCG CTGGGCCTTGCTTTGATCAACATGGCGGACAACAAAGCCCCGGGATGGGGATGATGCACTCCGCCTCCGCCGCCGCCGCCGGGGCCCCCG GCAGCATGGACCCCCTGCAGAACTCCCACGAAGGGTACCCCAACAGCCAGTGCAACCATTATCCGGGCTACAGCCGGCCCGGCGCGGGCG GCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGCAGCGGAGGAGGAGGAGGAGGAGGAGGAGCAGGAGCAGGAGGAGCAGGAGCGGGAG CTGTGGCGGCGGCGGCCGCGGCGGCGGCGGCAGCAGCAGGAGGCGGCGGCGGCGGCGGCTATGGGGGCTCGTCCGCGGGGTACGGGGTGC TGAGCTCCCCCCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCGGGGGCGGCGGGGCCGCGAGCCTCAGCAAGGCGGCCGCCGGCTCGG CGGCGGGGGGCTTCCAGCGCTTCGCCGGCCAGAACCAGCACCCGTCGGGGGCCACCCCGACCCTCAATCAGCTGCTCACCTCGCCCAGCC CCATGATGCGGAGCTACGGCGGCAGCTACCCCGAGTACAGCAGCCCCAGCGCGCCGCCGCCGCCGCCGTCGCAGCCCCAGTCCCAGGCGG CGGCGGCGGGGGCGGCGGCGGGCGGCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGGACATGGGCGCCCAGTACGCCGCTGCCAGCC CGGCCTGGGCGGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCCCGGCACCCCCGGACCGACCATGGGCAGATCCCAGGGCAGCCCAA TGGATCCAATGGTGATGAAGAGACCTCAGTTGTATGGCATGGGCAGTAACCCTCATTCTCAGCCTCAGCAGAGCAGTCCGTACCCAGGAG GTTCCTATGGCCCTCCAGGCCCACAGCGGTATCCAATTGGCATCCAGGGTCGGACTCCCGGGGCCATGGCCGGAATGCAGTACCCTCAGC AGCAGGCTCGGGTTATGTATGATTTTGCTGCTGAACCTGGAAATAATGAACTGACGGTTAATGAAGGAGAAATCATCACAATCACAAATC CGGATGTAGGTGGAGGATGGCTGGAAGGAAGAAACATCAAAGGAGAACGAGGGCTGGTTCCCACAGACTACGTTGAAATTTTACCCAGTG ATGGAAAAGATCAATTTTCTTGTGGAAATTCAGTGGCTGACCAAGCCTTCCTTGATTCTCTCTCAGCCAGCACAGCTCAGGCCAGTTCGT CGGCTGCCAGCAACAATCACCAGGTTGGCAGTGGCAATGACCCCTGGTCAGCCTGGAGTGCCTCCAAATCTGGGAACTGGGAAAGCTCAG AAGGCTGGGGGGCCCAGCCAGAGGGGGCTGGAGCCCAAAGAAACACAAACACTCCCAACAACTGGGACACTGCCTTCGGCCACCCCCAGG CCTACCAAGGACCAGCAACTGGTGATGATGATGACTGGGATGAAGACTGGGATGGGCCCAAATCCTCTTCCTACTTTAAGGATTCAGAGT CAGCTGATGCAGGCGGCGCTCAGCGAGGAAACAGTCGTGCTAGTTCCTCATCCATGAAAATTCCCCTTAACAAATTTCCTGGATTTGCGA AACCTGGCACGGAACAGTATTTGTTGGCCAAACAACTAGCAAAACCCAAAGAGAAAATTCCCATCATTGTTGGAGATTATGGCCCAATGT GGGTTTATCCTACCTCTACTTTTGACTGTGTGGTAGCAGATCCCAGGAAAGGCTCCAAAATGTATGGTCTAAAGAGCTACATCGAATATC AGCTAACACCTACTAACACTAATCGATCTGTAAACCACAGGTATAAGCACTTTGACTGGTTATATGAGCGTCTCCTGGTTAAGTTTGGGT CAGCCATTCCAATCCCTTCTCTTCCAGACAAACAAGTCACAGGCCGCTTTGAAGAGGAATTTATCAAAATGCGCATGGAGAGACTTCAGG CCTGGATGACCAGGATGTGTCGCCATCCAGTAATCTCAGAAAGTGAAGTTTTCCAGCAGTTCCTAAATTTCCGAGATGAGAAGGAATGGA AAACTGGAAAGAGGAAGGCCGAGAGAGATGAGCTGGCGGGAGTCATGATATTTTCCACCATGGAACCAGAGGCACCTGACTTGGACTTAG TAGAAATAGAGCAGAAGTGCGAGGCTGTGGGGAAGTTCACCAAGGCCATGGATGACGGCGTGAAGGAGCTGCTGACGGTGGGGCAGGAGC ACTGGAAGCGCTGCACGGGCCCATTACCCAAGGAATATCAGAAGATAGGAAAGGCCTTGCAGAGTTTGGCCACAGTGTTCAGTTCCAGTG GCTATCAAGGTGAAACAGATCTCAATGATGCAATAACAGAAGCAGGAAAGACTTATGAAGAAATTGCCAGTCTCGTGGCAGAACAGCCAA AGAAAGATCTCCATTTCCTGATGGAATGTAATCACGAGTATAAAGGTTTTCTTGGCTGCTTCCCTGACATCATTGGCACTCACAAGGGAG CAATAGAAAAAGTGAAAGAAAGTGACAAACTAGTTGCAACAAGTAAAATCACCCTACAAGACAAACAGAACATGGTGAAGAGAGTCAGCA TCATGTCTTACGCGTTGCAAGCTGAGATGAATCACTTTCACAGTAACCGGATCTATGATTACAACAGTGTCATCCGCCTGTACCTGGAGC AGCAAGTGCAATTTTACGAAACGATTGCAGAAAAGCTGAGGCAGGCCCTCAGCCGCTTTCCAGTGATGTAGGACAGAACGGGCCTTGAAG AGAATGCCGCGTGCTTTCTCCTGACTTGGGGCAATGCAATTCAAAACTTTTTTTCCCCTATTATTCAGAAAAAAAAGGAAACAAAACCAA AAAGAAAGAGTTGCAAAAAACTGCATTTATTTTATTAGCCACCCTAAATGCGTCAGTTATTTAGGGATGGTCTTTTGTTCATTTCCGCAT CCATTATTTAAACCAGTGGAAATTGTCTCTATTTTTGGAAAGTACTTAAAAGTTACCAGAATTTTCAATGGAAAATGAGGGGTTTCTCCC CACTGATATTTTACATAGAGTCATAATTTATATGTCTTATAAATTATAAGTCTTATATAATTTATAAGTCTCCCACAATCTTCCAGTTCT TACCCAGTGTCAGATAATTAATTACTAATTACTTTCTTAAAAACATGAACTATGCCAGAATAAAAAATATCTATGTTTGTATATTTTTAT AACTCCTTTCAGTCCTCTGGGGCTCCTGTCATTGAGGGAAGTCGTTACGCCTTTCACTGCCACAGTTACAGCTCAAGTGCTTACACTTCA AGAGGGAGGACGCTGGGGGCCCCTGGGGCTGCTAGTGCCATCGTGGTGTGTGGCAGGTGGGCCATCCCATGTCCCTCCAGGGGGACCCCA CAGCCTGGCAGATGAGCAGATACCCCTGGCCACCCATGTCCTCAGCGACATTTCTGATGTGCTGCTCTTATGTGAGGACCAGTGCTTTCT CTCTTTGCACTTCCTTCCTAATCTTGGTTAAGGCATGTTTTATGCCATGAAGAATACATTAGAAGAATTGAGGGACTTTGTAGAGAATTT TGTGGCTTTGGTCCAACGGGTGAGTGGCTGTGCGGAGGCCTGTGTTCGGGAGGGCCTGGGAGAAGGAGGGCACCCAGCACCCCGGCGTCT CTGGCCCTTTCTTATTCTTTGGCTCCTCATCCACCGTGATGAGAAGCGCTGCTGTGGCCACGGCACACTGCTTGGCTTGGGTGGCGGGTT CATGGCCAGTTGGTGTCATCAGCAAAGAGAAAAAGCACAGGTTAGCTCCCCATTAGATGGAAAAGTGTAGGGACTGAGAAGGGCTGCAGC CTCAGCAGTGTACAGAGTCCCCGGCGCTCTGAGGTTGGAGAGAAAGAACAGACCAGCGCCCTTCCCGACTACATCCGAAACTTCACACAG GGTGTTTCTGAGCACCAGCACTTCCAGCGCTTCACTTAACGGCATAAAGCAAAACAGGACCTTGGCACACCGTCAGCTCGAACTCAACAC TGGCAGCCACCGTCTCACCCCTGCGGAGGAGCGCTCCCGTCTCCCACAGGTGCCTTACCGCGTTCCCTCCCGCTGCTTTCATTTTTCTGA CCTAATAATTACGGGAAATGGAAAGTCTGGGCCAGCATCAATAAAATGACACCAAAAATAAGTAGATGAAATCAAATGAATATGAGAACA TCTTGTTCTTCAATATCACGGGTTTTTGTTAATGTTTCATAAGTAATTCTCCCCACTTGATTTTTCTTCTATAAAATCCCATAGAACAAT GTTTATGCTATAGCCATTTAATATATGTACAAATTGTAAAGAATATGTATAAATGTTTTACACGAATGTAAGAGCATGTAGAAGCCAACA TATAAATAAATTGTTTAAAAAAACTGTACAGTAAATTCTCAAAGCACTTTTTCAAAACACTTTTTGGACTTTGTGTGTGATTTTTGTTGT TGTTGTTAAGTACTTTTTATTCCAGCTGCTGAAAATGGTCCAGGTAATGAATTCTTCCCCAAATCCTATTTCTTCTGACATGAATTCATC ATTTCAGTTCCGTAGGTCAGTGTTGCGGTCCGGGAAGCGTATCATAACCACCTGGGAGTTGCCAAGAAGCAGACAGTCTCCCAGTGTCTG ACTCTCGGATATTTGGATTTGACTGGTGTGAGGCAAAGTGAAAAAGGGATGGGGGAAATGGAGATGGCACGGGCTCCTCAGAGCGTGGTA GCCGACTGTGAGGAAAAGCAGAGGGAATGTGAAAGAAAATAAGAGAATCCACGGGATTTGATGCCTGGAAGATTCTCCTTCAAGTGGCAA CATGGCATATATATCCTTCTCCGGGGAGTCACATGCACCATTTGGTTCTTAGATACGTTGATGTTTTGATTTTTAATGATTTGTATCAAC CTGTAGGTACCACAGAAGAGCTGTAGTCATACAATCACATAACTTTTACAAATATAGTGG >6421_6421_1_ARID1B-SNX9_ARID1B_chr6_157150555_ENST00000275248_SNX9_chr6_158288579_ENST00000392185_length(amino acids)=1137AA_BP=1 MSSSSSSSAAAAAASSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQ QQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQP PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSR PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKA AAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQY AAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGM QYPQQQARVMYDFAAEPGNNELTVNEGEIITITNPDVGGGWLEGRNIKGERGLVPTDYVEILPSDGKDQFSCGNSVADQAFLDSLSASTA QASSSAASNNHQVGSGNDPWSAWSASKSGNWESSEGWGAQPEGAGAQRNTNTPNNWDTAFGHPQAYQGPATGDDDDWDEDWDGPKSSSYF KDSESADAGGAQRGNSRASSSSMKIPLNKFPGFAKPGTEQYLLAKQLAKPKEKIPIIVGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKS YIEYQLTPTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRD EKEWKTGKRKAERDELAGVMIFSTMEPEAPDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATV FSSSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDKLVATSKITLQDKQNMV KRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM -------------------------------------------------------------- >6421_6421_2_ARID1B-SNX9_ARID1B_chr6_157150555_ENST00000346085_SNX9_chr6_158288579_ENST00000392185_length(transcript)=5753nt_BP=1738nt CATGGCCCATAACGCGGGCGCCGCGGCCGCCGCCGGCACCCACAGCGCCAAGAGCGGCGGCTCCGAGGCGGCTCTCAAGGAGGGTGGAAG CGCCGCCGCGCTGTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGGCATCCTCTTCCTCCTCGTCGGGCCCGGGCTCGGCCATGGA GACGGGGCTGCTCCCCAACCACAAACTGAAAACCGTTGGCGAAGCCCCCGCCGCGCCGCCCCACCAGCAGCACCACCACCACCACCATGC CCACCACCACCACCACCATGCCCACCACCTCCACCACCACCACGCACTACAGCAGCAGCTAAACCAGTTCCAGCAGCAGCAGCAGCAGCA GCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACATCCCATTTCCAACAACAACAGCTTGGGCGGCGCGGGCGGCGGCGCGCCTCAGCC CGGCCCCGACATGGAGCAGCCGCAACATGGAGGCGCCAAGGACAGTGCTGCGGGCGGCCAGGCCGACCCCCCGGGCCCGCCGCTGCTGAG CAAGCCGGGCGACGAGGACGACGCGCCGCCCAAGATGGGGGAGCCGGCGGGCGGCCGCTACGAGCACCCGGGCTTGGGCGCCCTGGGCAC GCAGCAGCCGCCGGTCGCCGTGCCCGGGGGCGGCGGCGGCCCGGCGGCCGTCCCGGAGTTTAATAATTACTATGGCAGCGCTGCCCCTGC GAGCGGCGGCCCCGGCGGCCGCGCTGGGCCTTGCTTTGATCAACATGGCGGACAACAAAGCCCCGGGATGGGGATGATGCACTCCGCCTC CGCCGCCGCCGCCGGGGCCCCCGGCAGCATGGACCCCCTGCAGAACTCCCACGAAGGGTACCCCAACAGCCAGTGCAACCATTATCCGGG CTACAGCCGGCCCGGCGCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGCAGCGGAGGAGGAGGAGGAGGAGGAGGAGCAGG AGCAGGAGGAGCAGGAGCGGGAGCTGTGGCGGCGGCGGCCGCGGCGGCGGCGGCAGCAGCAGGAGGCGGCGGCGGCGGCGGCTATGGGGG CTCGTCCGCGGGGTACGGGGTGCTGAGCTCCCCCCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCGGGGGCGGCGGGGCCGCGAGCCT CAGCAAGGCGGCCGCCGGCTCGGCGGCGGGGGGCTTCCAGCGCTTCGCCGGCCAGAACCAGCACCCGTCGGGGGCCACCCCGACCCTCAA TCAGCTGCTCACCTCGCCCAGCCCCATGATGCGGAGCTACGGCGGCAGCTACCCCGAGTACAGCAGCCCCAGCGCGCCGCCGCCGCCGCC GTCGCAGCCCCAGTCCCAGGCGGCGGCGGCGGGGGCGGCGGCGGGCGGCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGGACATGGG CGCCCAGTACGCCGCTGCCAGCCCGGCCTGGGCGGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCCCGGCACCCCCGGACCGACCAT GGGCAGATCCCAGGGCAGCCCAATGGATCCAATGGTGATGAAGAGACCTCAGTTGTATGGCATGGGCAGTAACCCTCATTCTCAGCCTCA GCAGAGCAGTCCGTACCCAGGAGGTTCCTATGGCCCTCCAGGCCCACAGCGGTATCCAATTGGCATCCAGGGTCGGACTCCCGGGGCCAT GGCCGGAATGCAGTACCCTCAGCAGCAGGCTCGGGTTATGTATGATTTTGCTGCTGAACCTGGAAATAATGAACTGACGGTTAATGAAGG AGAAATCATCACAATCACAAATCCGGATGTAGGTGGAGGATGGCTGGAAGGAAGAAACATCAAAGGAGAACGAGGGCTGGTTCCCACAGA CTACGTTGAAATTTTACCCAGTGATGGAAAAGATCAATTTTCTTGTGGAAATTCAGTGGCTGACCAAGCCTTCCTTGATTCTCTCTCAGC CAGCACAGCTCAGGCCAGTTCGTCGGCTGCCAGCAACAATCACCAGGTTGGCAGTGGCAATGACCCCTGGTCAGCCTGGAGTGCCTCCAA ATCTGGGAACTGGGAAAGCTCAGAAGGCTGGGGGGCCCAGCCAGAGGGGGCTGGAGCCCAAAGAAACACAAACACTCCCAACAACTGGGA CACTGCCTTCGGCCACCCCCAGGCCTACCAAGGACCAGCAACTGGTGATGATGATGACTGGGATGAAGACTGGGATGGGCCCAAATCCTC TTCCTACTTTAAGGATTCAGAGTCAGCTGATGCAGGCGGCGCTCAGCGAGGAAACAGTCGTGCTAGTTCCTCATCCATGAAAATTCCCCT TAACAAATTTCCTGGATTTGCGAAACCTGGCACGGAACAGTATTTGTTGGCCAAACAACTAGCAAAACCCAAAGAGAAAATTCCCATCAT TGTTGGAGATTATGGCCCAATGTGGGTTTATCCTACCTCTACTTTTGACTGTGTGGTAGCAGATCCCAGGAAAGGCTCCAAAATGTATGG TCTAAAGAGCTACATCGAATATCAGCTAACACCTACTAACACTAATCGATCTGTAAACCACAGGTATAAGCACTTTGACTGGTTATATGA GCGTCTCCTGGTTAAGTTTGGGTCAGCCATTCCAATCCCTTCTCTTCCAGACAAACAAGTCACAGGCCGCTTTGAAGAGGAATTTATCAA AATGCGCATGGAGAGACTTCAGGCCTGGATGACCAGGATGTGTCGCCATCCAGTAATCTCAGAAAGTGAAGTTTTCCAGCAGTTCCTAAA TTTCCGAGATGAGAAGGAATGGAAAACTGGAAAGAGGAAGGCCGAGAGAGATGAGCTGGCGGGAGTCATGATATTTTCCACCATGGAACC AGAGGCACCTGACTTGGACTTAGTAGAAATAGAGCAGAAGTGCGAGGCTGTGGGGAAGTTCACCAAGGCCATGGATGACGGCGTGAAGGA GCTGCTGACGGTGGGGCAGGAGCACTGGAAGCGCTGCACGGGCCCATTACCCAAGGAATATCAGAAGATAGGAAAGGCCTTGCAGAGTTT GGCCACAGTGTTCAGTTCCAGTGGCTATCAAGGTGAAACAGATCTCAATGATGCAATAACAGAAGCAGGAAAGACTTATGAAGAAATTGC CAGTCTCGTGGCAGAACAGCCAAAGAAAGATCTCCATTTCCTGATGGAATGTAATCACGAGTATAAAGGTTTTCTTGGCTGCTTCCCTGA CATCATTGGCACTCACAAGGGAGCAATAGAAAAAGTGAAAGAAAGTGACAAACTAGTTGCAACAAGTAAAATCACCCTACAAGACAAACA GAACATGGTGAAGAGAGTCAGCATCATGTCTTACGCGTTGCAAGCTGAGATGAATCACTTTCACAGTAACCGGATCTATGATTACAACAG TGTCATCCGCCTGTACCTGGAGCAGCAAGTGCAATTTTACGAAACGATTGCAGAAAAGCTGAGGCAGGCCCTCAGCCGCTTTCCAGTGAT GTAGGACAGAACGGGCCTTGAAGAGAATGCCGCGTGCTTTCTCCTGACTTGGGGCAATGCAATTCAAAACTTTTTTTCCCCTATTATTCA GAAAAAAAAGGAAACAAAACCAAAAAGAAAGAGTTGCAAAAAACTGCATTTATTTTATTAGCCACCCTAAATGCGTCAGTTATTTAGGGA TGGTCTTTTGTTCATTTCCGCATCCATTATTTAAACCAGTGGAAATTGTCTCTATTTTTGGAAAGTACTTAAAAGTTACCAGAATTTTCA ATGGAAAATGAGGGGTTTCTCCCCACTGATATTTTACATAGAGTCATAATTTATATGTCTTATAAATTATAAGTCTTATATAATTTATAA GTCTCCCACAATCTTCCAGTTCTTACCCAGTGTCAGATAATTAATTACTAATTACTTTCTTAAAAACATGAACTATGCCAGAATAAAAAA TATCTATGTTTGTATATTTTTATAACTCCTTTCAGTCCTCTGGGGCTCCTGTCATTGAGGGAAGTCGTTACGCCTTTCACTGCCACAGTT ACAGCTCAAGTGCTTACACTTCAAGAGGGAGGACGCTGGGGGCCCCTGGGGCTGCTAGTGCCATCGTGGTGTGTGGCAGGTGGGCCATCC CATGTCCCTCCAGGGGGACCCCACAGCCTGGCAGATGAGCAGATACCCCTGGCCACCCATGTCCTCAGCGACATTTCTGATGTGCTGCTC TTATGTGAGGACCAGTGCTTTCTCTCTTTGCACTTCCTTCCTAATCTTGGTTAAGGCATGTTTTATGCCATGAAGAATACATTAGAAGAA TTGAGGGACTTTGTAGAGAATTTTGTGGCTTTGGTCCAACGGGTGAGTGGCTGTGCGGAGGCCTGTGTTCGGGAGGGCCTGGGAGAAGGA GGGCACCCAGCACCCCGGCGTCTCTGGCCCTTTCTTATTCTTTGGCTCCTCATCCACCGTGATGAGAAGCGCTGCTGTGGCCACGGCACA CTGCTTGGCTTGGGTGGCGGGTTCATGGCCAGTTGGTGTCATCAGCAAAGAGAAAAAGCACAGGTTAGCTCCCCATTAGATGGAAAAGTG TAGGGACTGAGAAGGGCTGCAGCCTCAGCAGTGTACAGAGTCCCCGGCGCTCTGAGGTTGGAGAGAAAGAACAGACCAGCGCCCTTCCCG ACTACATCCGAAACTTCACACAGGGTGTTTCTGAGCACCAGCACTTCCAGCGCTTCACTTAACGGCATAAAGCAAAACAGGACCTTGGCA CACCGTCAGCTCGAACTCAACACTGGCAGCCACCGTCTCACCCCTGCGGAGGAGCGCTCCCGTCTCCCACAGGTGCCTTACCGCGTTCCC TCCCGCTGCTTTCATTTTTCTGACCTAATAATTACGGGAAATGGAAAGTCTGGGCCAGCATCAATAAAATGACACCAAAAATAAGTAGAT GAAATCAAATGAATATGAGAACATCTTGTTCTTCAATATCACGGGTTTTTGTTAATGTTTCATAAGTAATTCTCCCCACTTGATTTTTCT TCTATAAAATCCCATAGAACAATGTTTATGCTATAGCCATTTAATATATGTACAAATTGTAAAGAATATGTATAAATGTTTTACACGAAT GTAAGAGCATGTAGAAGCCAACATATAAATAAATTGTTTAAAAAAACTGTACAGTAAATTCTCAAAGCACTTTTTCAAAACACTTTTTGG ACTTTGTGTGTGATTTTTGTTGTTGTTGTTAAGTACTTTTTATTCCAGCTGCTGAAAATGGTCCAGGTAATGAATTCTTCCCCAAATCCT ATTTCTTCTGACATGAATTCATCATTTCAGTTCCGTAGGTCAGTGTTGCGGTCCGGGAAGCGTATCATAACCACCTGGGAGTTGCCAAGA AGCAGACAGTCTCCCAGTGTCTGACTCTCGGATATTTGGATTTGACTGGTGTGAGGCAAAGTGAAAAAGGGATGGGGGAAATGGAGATGG CACGGGCTCCTCAGAGCGTGGTAGCCGACTGTGAGGAAAAGCAGAGGGAATGTGAAAGAAAATAAGAGAATCCACGGGATTTGATGCCTG GAAGATTCTCCTTCAAGTGGCAACATGGCATATATATCCTTCTCCGGGGAGTCACATGCACCATTTGGTTCTTAGATACGTTGATGTTTT GATTTTTAATGATTTGTATCAACCTGTAGGTACCACAGAAGAGCTGTAGTCATACAATCACATAACTTTTACAAATATAGTGG >6421_6421_2_ARID1B-SNX9_ARID1B_chr6_157150555_ENST00000346085_SNX9_chr6_158288579_ENST00000392185_length(amino acids)=1170AA_BP=0 MAHNAGAAAAAGTHSAKSGGSEAALKEGGSAAALSSSSSSSAAAAAASSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHA HHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS KPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSAS AAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG SSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPP SQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQ QSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQARVMYDFAAEPGNNELTVNEGEIITITNPDVGGGWLEGRNIKGERGLVPTD YVEILPSDGKDQFSCGNSVADQAFLDSLSASTAQASSSAASNNHQVGSGNDPWSAWSASKSGNWESSEGWGAQPEGAGAQRNTNTPNNWD TAFGHPQAYQGPATGDDDDWDEDWDGPKSSSYFKDSESADAGGAQRGNSRASSSSMKIPLNKFPGFAKPGTEQYLLAKQLAKPKEKIPII VGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGRFEEEFIK MRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAERDELAGVMIFSTMEPEAPDLDLVEIEQKCEAVGKFTKAMDDGVKE LLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPD IIGTHKGAIEKVKESDKLVATSKITLQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM -------------------------------------------------------------- >6421_6421_3_ARID1B-SNX9_ARID1B_chr6_157150555_ENST00000350026_SNX9_chr6_158288579_ENST00000392185_length(transcript)=5753nt_BP=1738nt CATGGCCCATAACGCGGGCGCCGCGGCCGCCGCCGGCACCCACAGCGCCAAGAGCGGCGGCTCCGAGGCGGCTCTCAAGGAGGGTGGAAG CGCCGCCGCGCTGTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGGCATCCTCTTCCTCCTCGTCGGGCCCGGGCTCGGCCATGGA GACGGGGCTGCTCCCCAACCACAAACTGAAAACCGTTGGCGAAGCCCCCGCCGCGCCGCCCCACCAGCAGCACCACCACCACCACCATGC CCACCACCACCACCACCATGCCCACCACCTCCACCACCACCACGCACTACAGCAGCAGCTAAACCAGTTCCAGCAGCAGCAGCAGCAGCA GCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACATCCCATTTCCAACAACAACAGCTTGGGCGGCGCGGGCGGCGGCGCGCCTCAGCC CGGCCCCGACATGGAGCAGCCGCAACATGGAGGCGCCAAGGACAGTGCTGCGGGCGGCCAGGCCGACCCCCCGGGCCCGCCGCTGCTGAG CAAGCCGGGCGACGAGGACGACGCGCCGCCCAAGATGGGGGAGCCGGCGGGCGGCCGCTACGAGCACCCGGGCTTGGGCGCCCTGGGCAC GCAGCAGCCGCCGGTCGCCGTGCCCGGGGGCGGCGGCGGCCCGGCGGCCGTCCCGGAGTTTAATAATTACTATGGCAGCGCTGCCCCTGC GAGCGGCGGCCCCGGCGGCCGCGCTGGGCCTTGCTTTGATCAACATGGCGGACAACAAAGCCCCGGGATGGGGATGATGCACTCCGCCTC CGCCGCCGCCGCCGGGGCCCCCGGCAGCATGGACCCCCTGCAGAACTCCCACGAAGGGTACCCCAACAGCCAGTGCAACCATTATCCGGG CTACAGCCGGCCCGGCGCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGCAGCGGAGGAGGAGGAGGAGGAGGAGGAGCAGG AGCAGGAGGAGCAGGAGCGGGAGCTGTGGCGGCGGCGGCCGCGGCGGCGGCGGCAGCAGCAGGAGGCGGCGGCGGCGGCGGCTATGGGGG CTCGTCCGCGGGGTACGGGGTGCTGAGCTCCCCCCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCGGGGGCGGCGGGGCCGCGAGCCT CAGCAAGGCGGCCGCCGGCTCGGCGGCGGGGGGCTTCCAGCGCTTCGCCGGCCAGAACCAGCACCCGTCGGGGGCCACCCCGACCCTCAA TCAGCTGCTCACCTCGCCCAGCCCCATGATGCGGAGCTACGGCGGCAGCTACCCCGAGTACAGCAGCCCCAGCGCGCCGCCGCCGCCGCC GTCGCAGCCCCAGTCCCAGGCGGCGGCGGCGGGGGCGGCGGCGGGCGGCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGGACATGGG CGCCCAGTACGCCGCTGCCAGCCCGGCCTGGGCGGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCCCGGCACCCCCGGACCGACCAT GGGCAGATCCCAGGGCAGCCCAATGGATCCAATGGTGATGAAGAGACCTCAGTTGTATGGCATGGGCAGTAACCCTCATTCTCAGCCTCA GCAGAGCAGTCCGTACCCAGGAGGTTCCTATGGCCCTCCAGGCCCACAGCGGTATCCAATTGGCATCCAGGGTCGGACTCCCGGGGCCAT GGCCGGAATGCAGTACCCTCAGCAGCAGGCTCGGGTTATGTATGATTTTGCTGCTGAACCTGGAAATAATGAACTGACGGTTAATGAAGG AGAAATCATCACAATCACAAATCCGGATGTAGGTGGAGGATGGCTGGAAGGAAGAAACATCAAAGGAGAACGAGGGCTGGTTCCCACAGA CTACGTTGAAATTTTACCCAGTGATGGAAAAGATCAATTTTCTTGTGGAAATTCAGTGGCTGACCAAGCCTTCCTTGATTCTCTCTCAGC CAGCACAGCTCAGGCCAGTTCGTCGGCTGCCAGCAACAATCACCAGGTTGGCAGTGGCAATGACCCCTGGTCAGCCTGGAGTGCCTCCAA ATCTGGGAACTGGGAAAGCTCAGAAGGCTGGGGGGCCCAGCCAGAGGGGGCTGGAGCCCAAAGAAACACAAACACTCCCAACAACTGGGA CACTGCCTTCGGCCACCCCCAGGCCTACCAAGGACCAGCAACTGGTGATGATGATGACTGGGATGAAGACTGGGATGGGCCCAAATCCTC TTCCTACTTTAAGGATTCAGAGTCAGCTGATGCAGGCGGCGCTCAGCGAGGAAACAGTCGTGCTAGTTCCTCATCCATGAAAATTCCCCT TAACAAATTTCCTGGATTTGCGAAACCTGGCACGGAACAGTATTTGTTGGCCAAACAACTAGCAAAACCCAAAGAGAAAATTCCCATCAT TGTTGGAGATTATGGCCCAATGTGGGTTTATCCTACCTCTACTTTTGACTGTGTGGTAGCAGATCCCAGGAAAGGCTCCAAAATGTATGG TCTAAAGAGCTACATCGAATATCAGCTAACACCTACTAACACTAATCGATCTGTAAACCACAGGTATAAGCACTTTGACTGGTTATATGA GCGTCTCCTGGTTAAGTTTGGGTCAGCCATTCCAATCCCTTCTCTTCCAGACAAACAAGTCACAGGCCGCTTTGAAGAGGAATTTATCAA AATGCGCATGGAGAGACTTCAGGCCTGGATGACCAGGATGTGTCGCCATCCAGTAATCTCAGAAAGTGAAGTTTTCCAGCAGTTCCTAAA TTTCCGAGATGAGAAGGAATGGAAAACTGGAAAGAGGAAGGCCGAGAGAGATGAGCTGGCGGGAGTCATGATATTTTCCACCATGGAACC AGAGGCACCTGACTTGGACTTAGTAGAAATAGAGCAGAAGTGCGAGGCTGTGGGGAAGTTCACCAAGGCCATGGATGACGGCGTGAAGGA GCTGCTGACGGTGGGGCAGGAGCACTGGAAGCGCTGCACGGGCCCATTACCCAAGGAATATCAGAAGATAGGAAAGGCCTTGCAGAGTTT GGCCACAGTGTTCAGTTCCAGTGGCTATCAAGGTGAAACAGATCTCAATGATGCAATAACAGAAGCAGGAAAGACTTATGAAGAAATTGC CAGTCTCGTGGCAGAACAGCCAAAGAAAGATCTCCATTTCCTGATGGAATGTAATCACGAGTATAAAGGTTTTCTTGGCTGCTTCCCTGA CATCATTGGCACTCACAAGGGAGCAATAGAAAAAGTGAAAGAAAGTGACAAACTAGTTGCAACAAGTAAAATCACCCTACAAGACAAACA GAACATGGTGAAGAGAGTCAGCATCATGTCTTACGCGTTGCAAGCTGAGATGAATCACTTTCACAGTAACCGGATCTATGATTACAACAG TGTCATCCGCCTGTACCTGGAGCAGCAAGTGCAATTTTACGAAACGATTGCAGAAAAGCTGAGGCAGGCCCTCAGCCGCTTTCCAGTGAT GTAGGACAGAACGGGCCTTGAAGAGAATGCCGCGTGCTTTCTCCTGACTTGGGGCAATGCAATTCAAAACTTTTTTTCCCCTATTATTCA GAAAAAAAAGGAAACAAAACCAAAAAGAAAGAGTTGCAAAAAACTGCATTTATTTTATTAGCCACCCTAAATGCGTCAGTTATTTAGGGA TGGTCTTTTGTTCATTTCCGCATCCATTATTTAAACCAGTGGAAATTGTCTCTATTTTTGGAAAGTACTTAAAAGTTACCAGAATTTTCA ATGGAAAATGAGGGGTTTCTCCCCACTGATATTTTACATAGAGTCATAATTTATATGTCTTATAAATTATAAGTCTTATATAATTTATAA GTCTCCCACAATCTTCCAGTTCTTACCCAGTGTCAGATAATTAATTACTAATTACTTTCTTAAAAACATGAACTATGCCAGAATAAAAAA TATCTATGTTTGTATATTTTTATAACTCCTTTCAGTCCTCTGGGGCTCCTGTCATTGAGGGAAGTCGTTACGCCTTTCACTGCCACAGTT ACAGCTCAAGTGCTTACACTTCAAGAGGGAGGACGCTGGGGGCCCCTGGGGCTGCTAGTGCCATCGTGGTGTGTGGCAGGTGGGCCATCC CATGTCCCTCCAGGGGGACCCCACAGCCTGGCAGATGAGCAGATACCCCTGGCCACCCATGTCCTCAGCGACATTTCTGATGTGCTGCTC TTATGTGAGGACCAGTGCTTTCTCTCTTTGCACTTCCTTCCTAATCTTGGTTAAGGCATGTTTTATGCCATGAAGAATACATTAGAAGAA TTGAGGGACTTTGTAGAGAATTTTGTGGCTTTGGTCCAACGGGTGAGTGGCTGTGCGGAGGCCTGTGTTCGGGAGGGCCTGGGAGAAGGA GGGCACCCAGCACCCCGGCGTCTCTGGCCCTTTCTTATTCTTTGGCTCCTCATCCACCGTGATGAGAAGCGCTGCTGTGGCCACGGCACA CTGCTTGGCTTGGGTGGCGGGTTCATGGCCAGTTGGTGTCATCAGCAAAGAGAAAAAGCACAGGTTAGCTCCCCATTAGATGGAAAAGTG TAGGGACTGAGAAGGGCTGCAGCCTCAGCAGTGTACAGAGTCCCCGGCGCTCTGAGGTTGGAGAGAAAGAACAGACCAGCGCCCTTCCCG ACTACATCCGAAACTTCACACAGGGTGTTTCTGAGCACCAGCACTTCCAGCGCTTCACTTAACGGCATAAAGCAAAACAGGACCTTGGCA CACCGTCAGCTCGAACTCAACACTGGCAGCCACCGTCTCACCCCTGCGGAGGAGCGCTCCCGTCTCCCACAGGTGCCTTACCGCGTTCCC TCCCGCTGCTTTCATTTTTCTGACCTAATAATTACGGGAAATGGAAAGTCTGGGCCAGCATCAATAAAATGACACCAAAAATAAGTAGAT GAAATCAAATGAATATGAGAACATCTTGTTCTTCAATATCACGGGTTTTTGTTAATGTTTCATAAGTAATTCTCCCCACTTGATTTTTCT TCTATAAAATCCCATAGAACAATGTTTATGCTATAGCCATTTAATATATGTACAAATTGTAAAGAATATGTATAAATGTTTTACACGAAT GTAAGAGCATGTAGAAGCCAACATATAAATAAATTGTTTAAAAAAACTGTACAGTAAATTCTCAAAGCACTTTTTCAAAACACTTTTTGG ACTTTGTGTGTGATTTTTGTTGTTGTTGTTAAGTACTTTTTATTCCAGCTGCTGAAAATGGTCCAGGTAATGAATTCTTCCCCAAATCCT ATTTCTTCTGACATGAATTCATCATTTCAGTTCCGTAGGTCAGTGTTGCGGTCCGGGAAGCGTATCATAACCACCTGGGAGTTGCCAAGA AGCAGACAGTCTCCCAGTGTCTGACTCTCGGATATTTGGATTTGACTGGTGTGAGGCAAAGTGAAAAAGGGATGGGGGAAATGGAGATGG CACGGGCTCCTCAGAGCGTGGTAGCCGACTGTGAGGAAAAGCAGAGGGAATGTGAAAGAAAATAAGAGAATCCACGGGATTTGATGCCTG GAAGATTCTCCTTCAAGTGGCAACATGGCATATATATCCTTCTCCGGGGAGTCACATGCACCATTTGGTTCTTAGATACGTTGATGTTTT GATTTTTAATGATTTGTATCAACCTGTAGGTACCACAGAAGAGCTGTAGTCATACAATCACATAACTTTTACAAATATAGTGG >6421_6421_3_ARID1B-SNX9_ARID1B_chr6_157150555_ENST00000350026_SNX9_chr6_158288579_ENST00000392185_length(amino acids)=1170AA_BP=0 MAHNAGAAAAAGTHSAKSGGSEAALKEGGSAAALSSSSSSSAAAAAASSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHA HHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS KPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSAS AAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG SSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPP SQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQ QSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQARVMYDFAAEPGNNELTVNEGEIITITNPDVGGGWLEGRNIKGERGLVPTD YVEILPSDGKDQFSCGNSVADQAFLDSLSASTAQASSSAASNNHQVGSGNDPWSAWSASKSGNWESSEGWGAQPEGAGAQRNTNTPNNWD TAFGHPQAYQGPATGDDDDWDEDWDGPKSSSYFKDSESADAGGAQRGNSRASSSSMKIPLNKFPGFAKPGTEQYLLAKQLAKPKEKIPII VGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGRFEEEFIK MRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAERDELAGVMIFSTMEPEAPDLDLVEIEQKCEAVGKFTKAMDDGVKE LLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPD IIGTHKGAIEKVKESDKLVATSKITLQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM -------------------------------------------------------------- >6421_6421_4_ARID1B-SNX9_ARID1B_chr6_157150555_ENST00000367148_SNX9_chr6_158288579_ENST00000392185_length(transcript)=5752nt_BP=1737nt ATGGCCCATAACGCGGGCGCCGCGGCCGCCGCCGGCACCCACAGCGCCAAGAGCGGCGGCTCCGAGGCGGCTCTCAAGGAGGGTGGAAGC GCCGCCGCGCTGTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGGCATCCTCTTCCTCCTCGTCGGGCCCGGGCTCGGCCATGGAG ACGGGGCTGCTCCCCAACCACAAACTGAAAACCGTTGGCGAAGCCCCCGCCGCGCCGCCCCACCAGCAGCACCACCACCACCACCATGCC CACCACCACCACCACCATGCCCACCACCTCCACCACCACCACGCACTACAGCAGCAGCTAAACCAGTTCCAGCAGCAGCAGCAGCAGCAG CAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACATCCCATTTCCAACAACAACAGCTTGGGCGGCGCGGGCGGCGGCGCGCCTCAGCCC GGCCCCGACATGGAGCAGCCGCAACATGGAGGCGCCAAGGACAGTGCTGCGGGCGGCCAGGCCGACCCCCCGGGCCCGCCGCTGCTGAGC AAGCCGGGCGACGAGGACGACGCGCCGCCCAAGATGGGGGAGCCGGCGGGCGGCCGCTACGAGCACCCGGGCTTGGGCGCCCTGGGCACG CAGCAGCCGCCGGTCGCCGTGCCCGGGGGCGGCGGCGGCCCGGCGGCCGTCCCGGAGTTTAATAATTACTATGGCAGCGCTGCCCCTGCG AGCGGCGGCCCCGGCGGCCGCGCTGGGCCTTGCTTTGATCAACATGGCGGACAACAAAGCCCCGGGATGGGGATGATGCACTCCGCCTCC GCCGCCGCCGCCGGGGCCCCCGGCAGCATGGACCCCCTGCAGAACTCCCACGAAGGGTACCCCAACAGCCAGTGCAACCATTATCCGGGC TACAGCCGGCCCGGCGCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGCAGCGGAGGAGGAGGAGGAGGAGGAGGAGCAGGA GCAGGAGGAGCAGGAGCGGGAGCTGTGGCGGCGGCGGCCGCGGCGGCGGCGGCAGCAGCAGGAGGCGGCGGCGGCGGCGGCTATGGGGGC TCGTCCGCGGGGTACGGGGTGCTGAGCTCCCCCCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCGGGGGCGGCGGGGCCGCGAGCCTC AGCAAGGCGGCCGCCGGCTCGGCGGCGGGGGGCTTCCAGCGCTTCGCCGGCCAGAACCAGCACCCGTCGGGGGCCACCCCGACCCTCAAT CAGCTGCTCACCTCGCCCAGCCCCATGATGCGGAGCTACGGCGGCAGCTACCCCGAGTACAGCAGCCCCAGCGCGCCGCCGCCGCCGCCG TCGCAGCCCCAGTCCCAGGCGGCGGCGGCGGGGGCGGCGGCGGGCGGCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGGACATGGGC GCCCAGTACGCCGCTGCCAGCCCGGCCTGGGCGGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCCCGGCACCCCCGGACCGACCATG GGCAGATCCCAGGGCAGCCCAATGGATCCAATGGTGATGAAGAGACCTCAGTTGTATGGCATGGGCAGTAACCCTCATTCTCAGCCTCAG CAGAGCAGTCCGTACCCAGGAGGTTCCTATGGCCCTCCAGGCCCACAGCGGTATCCAATTGGCATCCAGGGTCGGACTCCCGGGGCCATG GCCGGAATGCAGTACCCTCAGCAGCAGGCTCGGGTTATGTATGATTTTGCTGCTGAACCTGGAAATAATGAACTGACGGTTAATGAAGGA GAAATCATCACAATCACAAATCCGGATGTAGGTGGAGGATGGCTGGAAGGAAGAAACATCAAAGGAGAACGAGGGCTGGTTCCCACAGAC TACGTTGAAATTTTACCCAGTGATGGAAAAGATCAATTTTCTTGTGGAAATTCAGTGGCTGACCAAGCCTTCCTTGATTCTCTCTCAGCC AGCACAGCTCAGGCCAGTTCGTCGGCTGCCAGCAACAATCACCAGGTTGGCAGTGGCAATGACCCCTGGTCAGCCTGGAGTGCCTCCAAA TCTGGGAACTGGGAAAGCTCAGAAGGCTGGGGGGCCCAGCCAGAGGGGGCTGGAGCCCAAAGAAACACAAACACTCCCAACAACTGGGAC ACTGCCTTCGGCCACCCCCAGGCCTACCAAGGACCAGCAACTGGTGATGATGATGACTGGGATGAAGACTGGGATGGGCCCAAATCCTCT TCCTACTTTAAGGATTCAGAGTCAGCTGATGCAGGCGGCGCTCAGCGAGGAAACAGTCGTGCTAGTTCCTCATCCATGAAAATTCCCCTT AACAAATTTCCTGGATTTGCGAAACCTGGCACGGAACAGTATTTGTTGGCCAAACAACTAGCAAAACCCAAAGAGAAAATTCCCATCATT GTTGGAGATTATGGCCCAATGTGGGTTTATCCTACCTCTACTTTTGACTGTGTGGTAGCAGATCCCAGGAAAGGCTCCAAAATGTATGGT CTAAAGAGCTACATCGAATATCAGCTAACACCTACTAACACTAATCGATCTGTAAACCACAGGTATAAGCACTTTGACTGGTTATATGAG CGTCTCCTGGTTAAGTTTGGGTCAGCCATTCCAATCCCTTCTCTTCCAGACAAACAAGTCACAGGCCGCTTTGAAGAGGAATTTATCAAA ATGCGCATGGAGAGACTTCAGGCCTGGATGACCAGGATGTGTCGCCATCCAGTAATCTCAGAAAGTGAAGTTTTCCAGCAGTTCCTAAAT TTCCGAGATGAGAAGGAATGGAAAACTGGAAAGAGGAAGGCCGAGAGAGATGAGCTGGCGGGAGTCATGATATTTTCCACCATGGAACCA GAGGCACCTGACTTGGACTTAGTAGAAATAGAGCAGAAGTGCGAGGCTGTGGGGAAGTTCACCAAGGCCATGGATGACGGCGTGAAGGAG CTGCTGACGGTGGGGCAGGAGCACTGGAAGCGCTGCACGGGCCCATTACCCAAGGAATATCAGAAGATAGGAAAGGCCTTGCAGAGTTTG GCCACAGTGTTCAGTTCCAGTGGCTATCAAGGTGAAACAGATCTCAATGATGCAATAACAGAAGCAGGAAAGACTTATGAAGAAATTGCC AGTCTCGTGGCAGAACAGCCAAAGAAAGATCTCCATTTCCTGATGGAATGTAATCACGAGTATAAAGGTTTTCTTGGCTGCTTCCCTGAC ATCATTGGCACTCACAAGGGAGCAATAGAAAAAGTGAAAGAAAGTGACAAACTAGTTGCAACAAGTAAAATCACCCTACAAGACAAACAG AACATGGTGAAGAGAGTCAGCATCATGTCTTACGCGTTGCAAGCTGAGATGAATCACTTTCACAGTAACCGGATCTATGATTACAACAGT GTCATCCGCCTGTACCTGGAGCAGCAAGTGCAATTTTACGAAACGATTGCAGAAAAGCTGAGGCAGGCCCTCAGCCGCTTTCCAGTGATG TAGGACAGAACGGGCCTTGAAGAGAATGCCGCGTGCTTTCTCCTGACTTGGGGCAATGCAATTCAAAACTTTTTTTCCCCTATTATTCAG AAAAAAAAGGAAACAAAACCAAAAAGAAAGAGTTGCAAAAAACTGCATTTATTTTATTAGCCACCCTAAATGCGTCAGTTATTTAGGGAT GGTCTTTTGTTCATTTCCGCATCCATTATTTAAACCAGTGGAAATTGTCTCTATTTTTGGAAAGTACTTAAAAGTTACCAGAATTTTCAA TGGAAAATGAGGGGTTTCTCCCCACTGATATTTTACATAGAGTCATAATTTATATGTCTTATAAATTATAAGTCTTATATAATTTATAAG TCTCCCACAATCTTCCAGTTCTTACCCAGTGTCAGATAATTAATTACTAATTACTTTCTTAAAAACATGAACTATGCCAGAATAAAAAAT ATCTATGTTTGTATATTTTTATAACTCCTTTCAGTCCTCTGGGGCTCCTGTCATTGAGGGAAGTCGTTACGCCTTTCACTGCCACAGTTA CAGCTCAAGTGCTTACACTTCAAGAGGGAGGACGCTGGGGGCCCCTGGGGCTGCTAGTGCCATCGTGGTGTGTGGCAGGTGGGCCATCCC ATGTCCCTCCAGGGGGACCCCACAGCCTGGCAGATGAGCAGATACCCCTGGCCACCCATGTCCTCAGCGACATTTCTGATGTGCTGCTCT TATGTGAGGACCAGTGCTTTCTCTCTTTGCACTTCCTTCCTAATCTTGGTTAAGGCATGTTTTATGCCATGAAGAATACATTAGAAGAAT TGAGGGACTTTGTAGAGAATTTTGTGGCTTTGGTCCAACGGGTGAGTGGCTGTGCGGAGGCCTGTGTTCGGGAGGGCCTGGGAGAAGGAG GGCACCCAGCACCCCGGCGTCTCTGGCCCTTTCTTATTCTTTGGCTCCTCATCCACCGTGATGAGAAGCGCTGCTGTGGCCACGGCACAC TGCTTGGCTTGGGTGGCGGGTTCATGGCCAGTTGGTGTCATCAGCAAAGAGAAAAAGCACAGGTTAGCTCCCCATTAGATGGAAAAGTGT AGGGACTGAGAAGGGCTGCAGCCTCAGCAGTGTACAGAGTCCCCGGCGCTCTGAGGTTGGAGAGAAAGAACAGACCAGCGCCCTTCCCGA CTACATCCGAAACTTCACACAGGGTGTTTCTGAGCACCAGCACTTCCAGCGCTTCACTTAACGGCATAAAGCAAAACAGGACCTTGGCAC ACCGTCAGCTCGAACTCAACACTGGCAGCCACCGTCTCACCCCTGCGGAGGAGCGCTCCCGTCTCCCACAGGTGCCTTACCGCGTTCCCT CCCGCTGCTTTCATTTTTCTGACCTAATAATTACGGGAAATGGAAAGTCTGGGCCAGCATCAATAAAATGACACCAAAAATAAGTAGATG AAATCAAATGAATATGAGAACATCTTGTTCTTCAATATCACGGGTTTTTGTTAATGTTTCATAAGTAATTCTCCCCACTTGATTTTTCTT CTATAAAATCCCATAGAACAATGTTTATGCTATAGCCATTTAATATATGTACAAATTGTAAAGAATATGTATAAATGTTTTACACGAATG TAAGAGCATGTAGAAGCCAACATATAAATAAATTGTTTAAAAAAACTGTACAGTAAATTCTCAAAGCACTTTTTCAAAACACTTTTTGGA CTTTGTGTGTGATTTTTGTTGTTGTTGTTAAGTACTTTTTATTCCAGCTGCTGAAAATGGTCCAGGTAATGAATTCTTCCCCAAATCCTA TTTCTTCTGACATGAATTCATCATTTCAGTTCCGTAGGTCAGTGTTGCGGTCCGGGAAGCGTATCATAACCACCTGGGAGTTGCCAAGAA GCAGACAGTCTCCCAGTGTCTGACTCTCGGATATTTGGATTTGACTGGTGTGAGGCAAAGTGAAAAAGGGATGGGGGAAATGGAGATGGC ACGGGCTCCTCAGAGCGTGGTAGCCGACTGTGAGGAAAAGCAGAGGGAATGTGAAAGAAAATAAGAGAATCCACGGGATTTGATGCCTGG AAGATTCTCCTTCAAGTGGCAACATGGCATATATATCCTTCTCCGGGGAGTCACATGCACCATTTGGTTCTTAGATACGTTGATGTTTTG ATTTTTAATGATTTGTATCAACCTGTAGGTACCACAGAAGAGCTGTAGTCATACAATCACATAACTTTTACAAATATAGTGG >6421_6421_4_ARID1B-SNX9_ARID1B_chr6_157150555_ENST00000367148_SNX9_chr6_158288579_ENST00000392185_length(amino acids)=1170AA_BP=0 MAHNAGAAAAAGTHSAKSGGSEAALKEGGSAAALSSSSSSSAAAAAASSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHA HHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS KPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSAS AAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG SSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPP SQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQ QSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQARVMYDFAAEPGNNELTVNEGEIITITNPDVGGGWLEGRNIKGERGLVPTD YVEILPSDGKDQFSCGNSVADQAFLDSLSASTAQASSSAASNNHQVGSGNDPWSAWSASKSGNWESSEGWGAQPEGAGAQRNTNTPNNWD TAFGHPQAYQGPATGDDDDWDEDWDGPKSSSYFKDSESADAGGAQRGNSRASSSSMKIPLNKFPGFAKPGTEQYLLAKQLAKPKEKIPII VGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGRFEEEFIK MRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAERDELAGVMIFSTMEPEAPDLDLVEIEQKCEAVGKFTKAMDDGVKE LLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPD IIGTHKGAIEKVKESDKLVATSKITLQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ARID1B-SNX9 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ARID1B-SNX9 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ARID1B-SNX9 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | ARID1B | C0265338 | Coffin-Siris syndrome | 7 | CLINGEN;CTD_human;GENOMICS_ENGLAND |
| Hgene | ARID1B | C1535926 | Neurodevelopmental Disorders | 2 | CTD_human |
| Hgene | ARID1B | C3281201 | MENTAL RETARDATION, AUTOSOMAL DOMINANT 12 | 2 | GENOMICS_ENGLAND |
| Hgene | ARID1B | C0014544 | Epilepsy | 1 | CTD_human |
| Hgene | ARID1B | C0019569 | Hirschsprung Disease | 1 | GENOMICS_ENGLAND |
| Hgene | ARID1B | C0027819 | Neuroblastoma | 1 | CTD_human |
| Hgene | ARID1B | C0086237 | Epilepsy, Cryptogenic | 1 | CTD_human |
| Hgene | ARID1B | C0236018 | Aura | 1 | CTD_human |
| Hgene | ARID1B | C0751111 | Awakening Epilepsy | 1 | CTD_human |
| Hgene | ARID1B | C2239176 | Liver carcinoma | 1 | CGI;CTD_human |
| Hgene | ARID1B | C3150215 | CHROMOSOME 6q24-q25 DELETION SYNDROME | 1 | ORPHANET |
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