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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:BICD1-LOH12CR1 (FusionGDB2 ID:HG636TG118426) |
Fusion Gene Summary for BICD1-LOH12CR1 |
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Fusion gene information | Fusion gene name: BICD1-LOH12CR1 | Fusion gene ID: hg636tg118426 | Hgene | Tgene | Gene symbol | BICD1 | LOH12CR1 | Gene ID | 636 | 118426 |
Gene name | BICD cargo adaptor 1 | BLOC-1 related complex subunit 5 | |
Synonyms | BICD|bic-D 1 | LOH12CR1|LOH1CR12 | |
Cytomap | ('BICD1','BICD1')('BORCS5','LOH12CR1') 12p11.21 | 12p13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | protein bicaudal D homolog 1bicaudal D homolog 1cytoskeleton-like bicaudal D protein homolog 1 | BLOC-1-related complex subunit 5loss of heterozygosity 12 chromosomal region 1 proteinloss of heterozygosity, 12, chromosomal region 1myristoylated lysosomal proteinmyrlysin | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q96G01 | . | |
Ensembl transtripts involved in fusion gene | ENST00000281474, ENST00000548411, ENST00000550207, ENST00000551086, ENST00000551848, | ||
Fusion gene scores | * DoF score | 22 X 18 X 10=3960 | 7 X 3 X 6=126 |
# samples | 25 | 8 | |
** MAII score | log2(25/3960*10)=-3.98550043030488 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/126*10)=-0.655351828612554 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: BICD1 [Title/Abstract] AND LOH12CR1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | BICD1(32260478)-BORCS5(12588562), # samples:1 BICD1(32260478)-LOH12CR1(12588562), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | BICD1 | GO:0033365 | protein localization to organelle | 12447383|20089649 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | TGCT | TCGA-2G-AAKD-01A | BICD1 | chr12 | 32260478 | + | BORCS5 | chr12 | 12588562 | + |
ChimerDB4 | TGCT | TCGA-2G-AAKD-01A | BICD1 | chr12 | 32260478 | - | LOH12CR1 | chr12 | 12588562 | + |
ChimerDB4 | TGCT | TCGA-2G-AAKD | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
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Fusion Gene ORF analysis for BICD1-LOH12CR1 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000281474 | ENST00000298571 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
Frame-shift | ENST00000281474 | ENST00000314565 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
Frame-shift | ENST00000281474 | ENST00000542728 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
Frame-shift | ENST00000548411 | ENST00000298571 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
Frame-shift | ENST00000548411 | ENST00000314565 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
Frame-shift | ENST00000548411 | ENST00000542728 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
Frame-shift | ENST00000550207 | ENST00000298571 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
Frame-shift | ENST00000550207 | ENST00000314565 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
Frame-shift | ENST00000550207 | ENST00000542728 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
Frame-shift | ENST00000551086 | ENST00000298571 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
Frame-shift | ENST00000551086 | ENST00000314565 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
Frame-shift | ENST00000551086 | ENST00000542728 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
In-frame | ENST00000551848 | ENST00000298571 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
In-frame | ENST00000551848 | ENST00000314565 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
In-frame | ENST00000551848 | ENST00000542728 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000551848 | BICD1 | chr12 | 32260478 | + | ENST00000542728 | LOH12CR1 | chr12 | 12588562 | + | 1648 | 1252 | 1257 | 1640 | 127 |
ENST00000551848 | BICD1 | chr12 | 32260478 | + | ENST00000314565 | LOH12CR1 | chr12 | 12588562 | + | 2771 | 1252 | 1967 | 1254 | 237 |
ENST00000551848 | BICD1 | chr12 | 32260478 | + | ENST00000298571 | LOH12CR1 | chr12 | 12588562 | + | 1709 | 1252 | 1257 | 1640 | 127 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000551848 | ENST00000542728 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + | 0.47706744 | 0.5229325 |
ENST00000551848 | ENST00000314565 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + | 0.46241215 | 0.5375879 |
ENST00000551848 | ENST00000298571 | BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588562 | + | 0.57280034 | 0.42719963 |
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Fusion Genomic Features for BICD1-LOH12CR1 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588561 | + | 9.28E-15 | 1 |
BICD1 | chr12 | 32260478 | + | LOH12CR1 | chr12 | 12588561 | + | 9.28E-15 | 1 |
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Fusion Protein Features for BICD1-LOH12CR1 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:32260478/chr12:12588562) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
BICD1 | . |
FUNCTION: Regulates coat complex coatomer protein I (COPI)-independent Golgi-endoplasmic reticulum transport by recruiting the dynein-dynactin motor complex. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | BICD1 | chr12:32260478 | chr12:12588562 | ENST00000281474 | + | 1 | 10 | 1_265 | 71 | 976.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | BICD1 | chr12:32260478 | chr12:12588562 | ENST00000281474 | + | 1 | 10 | 319_496 | 71 | 976.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | BICD1 | chr12:32260478 | chr12:12588562 | ENST00000281474 | + | 1 | 10 | 663_803 | 71 | 976.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | BICD1 | chr12:32260478 | chr12:12588562 | ENST00000548411 | + | 1 | 9 | 1_265 | 71 | 2736.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | BICD1 | chr12:32260478 | chr12:12588562 | ENST00000548411 | + | 1 | 9 | 319_496 | 71 | 2736.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | BICD1 | chr12:32260478 | chr12:12588562 | ENST00000548411 | + | 1 | 9 | 663_803 | 71 | 2736.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | BICD1 | chr12:32260478 | chr12:12588562 | ENST00000551848 | + | 1 | 1 | 1_265 | 0 | 94.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | BICD1 | chr12:32260478 | chr12:12588562 | ENST00000551848 | + | 1 | 1 | 319_496 | 0 | 94.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | BICD1 | chr12:32260478 | chr12:12588562 | ENST00000551848 | + | 1 | 1 | 663_803 | 0 | 94.0 | Coiled coil | Ontology_term=ECO:0000255 |
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Fusion Gene Sequence for BICD1-LOH12CR1 |
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>9691_9691_1_BICD1-LOH12CR1_BICD1_chr12_32260478_ENST00000551848_LOH12CR1_chr12_12588562_ENST00000298571_length(transcript)=1709nt_BP=1252nt GTGAGTTGCCTGTCACCTCTCCCTTTCCTGGCCCTCACTCCCCCCACCCGCAAGGCCCACTCATCATGATCAAGAAGTCATAAAGGAGGT GATTGAAAGGACTGTTTTTTCTTCTAGGGCCCTTTGTTGGTAAGAGAAGATTGAAAGAGTCCATTGTTTCCTCCCCCAAGAGAAAAATTG CCTAAGAAATGAATATATAAGCTGGAATTTGGGAGGCAATGGCTGTTTGGCCTGCGGGGGAGGGAGATTAGTAAGAGTCATCAAGTCTCA GCACTCTAAGACGACATTCAAGTGGGTTGGAATGTATAAATCAAACTTCTCAAAACCGCTGTTATCTCAAACCCAGGTTTCAGCGACAAT TTCGTAGTCCACAAAAGTGATGAGGTTTGTGCCTGAGGACCCACAATTTCAGGATTTAGACTGTGTGGCACCTCAGCTTTCCTCTGGATG TAACCACTCCTTGGTGAGAGAGGGAACTCCTCACCAATCCCATTTGACAAAGGCTAGGCAATCTTCATTCTGCTTGGCTTTAGTCATTCT TGTCATTGGGCTGCAGAAGAAAAACAACTTTGCTGGGTGATCCCACTGCCTTGATTTCACCTCGGAGCGAGGCTGGGCCATGTCCAAGTC TTATGAGGTCACCCTGACTAGAAAAAATTGAACTCACCTACAAATAGTCTGAAAGAGTGGTGTATATCAAATACGTGGGTAGTGTTGCAT TTCAAATGAGGCTCTTCTGGTTGAAATGATATATTTATAAAACCAGAATATCAAAAATGGGTGATGTATAATGTCTCTTTAGTTTTTTGG TATTTGGCCTCTTTTAAAGCCTGTCGGATGTATGGGAGAAAACAATGAACGTGCTTTGATTTCCTATCAGTCACTCTTAAGAACATACAT ATTGTTTAAGTAACTCGGTCTTTTTTATCTGATTCTTGAGGCACTATGGGTAGCAAATAACCACTTACAAATTTAAATGTAATATACACT CCTTTTCTGTGTGTCAAGTCCTTATTTTTAGGTGCATATTGACATTTAAATGTTAATTATTGTTTGGCATATAATATCAAAAATCTATTA TTTATTTTATGCTGTTACAGTTAAAAGATGTGATTTATGACATACTGAATCAACTTGCCTTCCAATTTAGTGTGTAATATGGTAAGCATT TATACTTTTAGATATGTCTTATTTTTATTTGGATGCCTGTCTACCAAAAAATAAATGTACTACCTATGATTAAAAATCCCAAGGCTATTG AGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTG CATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGC TTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATACAG ATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGCCC >9691_9691_1_BICD1-LOH12CR1_BICD1_chr12_32260478_ENST00000551848_LOH12CR1_chr12_12588562_ENST00000298571_length(amino acids)=127AA_BP=1 MSGQTSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQKVNEMSAILRRI -------------------------------------------------------------- >9691_9691_2_BICD1-LOH12CR1_BICD1_chr12_32260478_ENST00000551848_LOH12CR1_chr12_12588562_ENST00000314565_length(transcript)=2771nt_BP=1252nt GTGAGTTGCCTGTCACCTCTCCCTTTCCTGGCCCTCACTCCCCCCACCCGCAAGGCCCACTCATCATGATCAAGAAGTCATAAAGGAGGT GATTGAAAGGACTGTTTTTTCTTCTAGGGCCCTTTGTTGGTAAGAGAAGATTGAAAGAGTCCATTGTTTCCTCCCCCAAGAGAAAAATTG CCTAAGAAATGAATATATAAGCTGGAATTTGGGAGGCAATGGCTGTTTGGCCTGCGGGGGAGGGAGATTAGTAAGAGTCATCAAGTCTCA GCACTCTAAGACGACATTCAAGTGGGTTGGAATGTATAAATCAAACTTCTCAAAACCGCTGTTATCTCAAACCCAGGTTTCAGCGACAAT TTCGTAGTCCACAAAAGTGATGAGGTTTGTGCCTGAGGACCCACAATTTCAGGATTTAGACTGTGTGGCACCTCAGCTTTCCTCTGGATG TAACCACTCCTTGGTGAGAGAGGGAACTCCTCACCAATCCCATTTGACAAAGGCTAGGCAATCTTCATTCTGCTTGGCTTTAGTCATTCT TGTCATTGGGCTGCAGAAGAAAAACAACTTTGCTGGGTGATCCCACTGCCTTGATTTCACCTCGGAGCGAGGCTGGGCCATGTCCAAGTC TTATGAGGTCACCCTGACTAGAAAAAATTGAACTCACCTACAAATAGTCTGAAAGAGTGGTGTATATCAAATACGTGGGTAGTGTTGCAT TTCAAATGAGGCTCTTCTGGTTGAAATGATATATTTATAAAACCAGAATATCAAAAATGGGTGATGTATAATGTCTCTTTAGTTTTTTGG TATTTGGCCTCTTTTAAAGCCTGTCGGATGTATGGGAGAAAACAATGAACGTGCTTTGATTTCCTATCAGTCACTCTTAAGAACATACAT ATTGTTTAAGTAACTCGGTCTTTTTTATCTGATTCTTGAGGCACTATGGGTAGCAAATAACCACTTACAAATTTAAATGTAATATACACT CCTTTTCTGTGTGTCAAGTCCTTATTTTTAGGTGCATATTGACATTTAAATGTTAATTATTGTTTGGCATATAATATCAAAAATCTATTA TTTATTTTATGCTGTTACAGTTAAAAGATGTGATTTATGACATACTGAATCAACTTGCCTTCCAATTTAGTGTGTAATATGGTAAGCATT TATACTTTTAGATATGTCTTATTTTTATTTGGATGCCTGTCTACCAAAAAATAAATGTACTACCTATGATTAAAAATCCCAAGGCTATTG AGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTG CATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGC TTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATACAG ATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGCCC GACCGCGAGCTCAGGCTGTAGCTGCTGCCCGGCCTGCCTGGGGCTGGGAGCCCCAGACACCGACACCCTGAGGACGTGTGGAGCTAAGGT CATATCATCTGACCAGGTCTGGAGGCTGGCGGGAGGCTCCCTGAAAGTGGGTGCGAAGGAGTCCGGCTGGCATGAAAATCTGACTTTGCC CAGCTCTTTTCCTTGATGCAGTTTCCCGGTGTGGAAGGAACCTAACCAGTTCTCGGTGATAACTGAAGCTGGAACGTGTGAATTATTAGG AATTCTTTGAAGAACTCTGCATTGAGAATTATTTTTATTTAGTTTTTTTTTTTTTTTAATTGAGAGTATATAGTCCAGTCCAGGTACCGG AATAAAAATATGGAGACAAGGGGAAAATATTTTACGAAGCTCTGTGTTCTCAACGCCCTCATGAACTTTTCAGTAGGCTGTCTGGTTTAT GTGTGGTCAACTTGAAAAACTAATTGAATCTAGGTCTCTGTATTGTTCCTGTTTCTACCCTGACTGTTTCCGTCACACCAAGCCCTTATC TGGGGCGCGTCTTCCTGCCCAGGTGGAACACTGGCATTTTGTTGACTGTCAGGTTAGGTGTCCCTTAGTCGTCATCAGAAGCTGAAGCCT TCCTTTCCACACCCTCATCAGATTCATCTCCACTGATAACCGGTTTCCTTGATGCAGACATAGTTTAGCTTTCTTTGACTGCAGAGATGT CTCATTCCACAGACATTTCTTGAACCCATTTGATGTGTCCAATATTGTGCCAGGGATACAAATATGGCCGTATAGCCTCAGGCCTTCATT TCTGAAAAGAAAAAAGCTCAAAAAGCTGCTGAATTTCTCTGGGAGTTTAGGAAAGGAAGTTATTTGAGTAACAACAAAAGTGCTTAGTGT CGTACTTTACACATCATAGGTGTTCTAATGGAAGCAAGGACTGGAGAAGCAAAGAGTGGAATGTGAGGAGCAGACCTAGGCAGACACCTT GAGACTAAAAGTCAGAGCTGAAGGGAGTCGCTGGGGCCAGGACGGCATGCAGGCCTGTACCCTGTTCCCTAAGTTCCTGCAAGCGTCGGG >9691_9691_2_BICD1-LOH12CR1_BICD1_chr12_32260478_ENST00000551848_LOH12CR1_chr12_12588562_ENST00000314565_length(amino acids)=237AA_BP=1 MDYILSIKKKKKLNKNNSQCRVLQRIPNNSHVPASVITENWLGSFHTGKLHQGKELGKVRFSCQPDSFAPTFREPPASLQTWSDDMTLAP HVLRVSVSGAPSPRQAGQQLQPELAVGLHAEGLQPLALGQHAVEPVQQGHSLVDAHLYAAEDGGHLVHFLDLLGILGVSFLALLHEAEQS -------------------------------------------------------------- >9691_9691_3_BICD1-LOH12CR1_BICD1_chr12_32260478_ENST00000551848_LOH12CR1_chr12_12588562_ENST00000542728_length(transcript)=1648nt_BP=1252nt GTGAGTTGCCTGTCACCTCTCCCTTTCCTGGCCCTCACTCCCCCCACCCGCAAGGCCCACTCATCATGATCAAGAAGTCATAAAGGAGGT GATTGAAAGGACTGTTTTTTCTTCTAGGGCCCTTTGTTGGTAAGAGAAGATTGAAAGAGTCCATTGTTTCCTCCCCCAAGAGAAAAATTG CCTAAGAAATGAATATATAAGCTGGAATTTGGGAGGCAATGGCTGTTTGGCCTGCGGGGGAGGGAGATTAGTAAGAGTCATCAAGTCTCA GCACTCTAAGACGACATTCAAGTGGGTTGGAATGTATAAATCAAACTTCTCAAAACCGCTGTTATCTCAAACCCAGGTTTCAGCGACAAT TTCGTAGTCCACAAAAGTGATGAGGTTTGTGCCTGAGGACCCACAATTTCAGGATTTAGACTGTGTGGCACCTCAGCTTTCCTCTGGATG TAACCACTCCTTGGTGAGAGAGGGAACTCCTCACCAATCCCATTTGACAAAGGCTAGGCAATCTTCATTCTGCTTGGCTTTAGTCATTCT TGTCATTGGGCTGCAGAAGAAAAACAACTTTGCTGGGTGATCCCACTGCCTTGATTTCACCTCGGAGCGAGGCTGGGCCATGTCCAAGTC TTATGAGGTCACCCTGACTAGAAAAAATTGAACTCACCTACAAATAGTCTGAAAGAGTGGTGTATATCAAATACGTGGGTAGTGTTGCAT TTCAAATGAGGCTCTTCTGGTTGAAATGATATATTTATAAAACCAGAATATCAAAAATGGGTGATGTATAATGTCTCTTTAGTTTTTTGG TATTTGGCCTCTTTTAAAGCCTGTCGGATGTATGGGAGAAAACAATGAACGTGCTTTGATTTCCTATCAGTCACTCTTAAGAACATACAT ATTGTTTAAGTAACTCGGTCTTTTTTATCTGATTCTTGAGGCACTATGGGTAGCAAATAACCACTTACAAATTTAAATGTAATATACACT CCTTTTCTGTGTGTCAAGTCCTTATTTTTAGGTGCATATTGACATTTAAATGTTAATTATTGTTTGGCATATAATATCAAAAATCTATTA TTTATTTTATGCTGTTACAGTTAAAAGATGTGATTTATGACATACTGAATCAACTTGCCTTCCAATTTAGTGTGTAATATGGTAAGCATT TATACTTTTAGATATGTCTTATTTTTATTTGGATGCCTGTCTACCAAAAAATAAATGTACTACCTATGATTAAAAATCCCAAGGCTATTG AGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTG CATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGC TTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATACAG ATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGCCC >9691_9691_3_BICD1-LOH12CR1_BICD1_chr12_32260478_ENST00000551848_LOH12CR1_chr12_12588562_ENST00000542728_length(amino acids)=127AA_BP=1 MSGQTSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQKVNEMSAILRRI -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for BICD1-LOH12CR1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for BICD1-LOH12CR1 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for BICD1-LOH12CR1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |