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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:ADIPOR2-CACNA2D4 (FusionGDB2 ID:HG79602TG93589) |
Fusion Gene Summary for ADIPOR2-CACNA2D4 |
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Fusion gene information | Fusion gene name: ADIPOR2-CACNA2D4 | Fusion gene ID: hg79602tg93589 | Hgene | Tgene | Gene symbol | ADIPOR2 | CACNA2D4 | Gene ID | 79602 | 93589 |
Gene name | adiponectin receptor 2 | calcium voltage-gated channel auxiliary subunit alpha2delta 4 | |
Synonyms | ACDCR2|PAQR2 | RCD4 | |
Cytomap | ('ADIPOR2')('CACNA2D4') 12p13.33 | 12p13.33 | |
Type of gene | protein-coding | protein-coding | |
Description | adiponectin receptor protein 2progestin and adipoQ receptor family member 2progestin and adipoQ receptor family member II | voltage-dependent calcium channel subunit alpha-2/delta-4calcium channel, voltage-dependent, alpha 2/delta subunit 4voltage-gated calcium channel alpha(2)delta-4 subunitvoltage-gated calcium channel subunit alpha-2/delta-4 | |
Modification date | 20200313 | 20200320 | |
UniProtAcc | . | Q7Z3S7 | |
Ensembl transtripts involved in fusion gene | ENST00000357103, ENST00000544470, | ||
Fusion gene scores | * DoF score | 18 X 10 X 8=1440 | 6 X 5 X 4=120 |
# samples | 22 | 6 | |
** MAII score | log2(22/1440*10)=-2.71049338280502 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/120*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ADIPOR2 [Title/Abstract] AND CACNA2D4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ADIPOR2(1863680)-CACNA2D4(1919506), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | ADIPOR2-CACNA2D4 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ADIPOR2-CACNA2D4 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ADIPOR2 | GO:0033211 | adiponectin-activated signaling pathway | 12802337 |
Tgene | CACNA2D4 | GO:0070588 | calcium ion transmembrane transport | 12181424 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-C8-A26Z-01A | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
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Fusion Gene ORF analysis for ADIPOR2-CACNA2D4 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000357103 | ENST00000538027 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
5CDS-intron | ENST00000357103 | ENST00000538450 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
5CDS-intron | ENST00000357103 | ENST00000539048 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
In-frame | ENST00000357103 | ENST00000382722 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
In-frame | ENST00000357103 | ENST00000585708 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
In-frame | ENST00000357103 | ENST00000585732 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
In-frame | ENST00000357103 | ENST00000586184 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
In-frame | ENST00000357103 | ENST00000587995 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
In-frame | ENST00000357103 | ENST00000588077 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
intron-3CDS | ENST00000544470 | ENST00000382722 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
intron-3CDS | ENST00000544470 | ENST00000585708 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
intron-3CDS | ENST00000544470 | ENST00000585732 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
intron-3CDS | ENST00000544470 | ENST00000586184 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
intron-3CDS | ENST00000544470 | ENST00000587995 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
intron-3CDS | ENST00000544470 | ENST00000588077 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
intron-intron | ENST00000544470 | ENST00000538027 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
intron-intron | ENST00000544470 | ENST00000538450 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
intron-intron | ENST00000544470 | ENST00000539048 | ADIPOR2 | chr12 | 1863680 | + | CACNA2D4 | chr12 | 1919506 | - |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
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Fusion Genomic Features for ADIPOR2-CACNA2D4 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for ADIPOR2-CACNA2D4 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:1863680/chr12:1919506) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | CACNA2D4 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: The alpha-2/delta subunit of voltage-dependent calcium channels regulates calcium current density and activation/inactivation kinetics of the calcium channel. {ECO:0000269|PubMed:12181424}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000382722 | 27 | 38 | 1137_1137 | 886 | 1138.0 | Topological domain | Cytoplasmic | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000585708 | 27 | 37 | 1137_1137 | 822 | 1091.0 | Topological domain | Cytoplasmic | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000586184 | 27 | 37 | 1137_1137 | 886 | 1155.0 | Topological domain | Cytoplasmic | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000588077 | 27 | 38 | 1137_1137 | 822 | 1074.0 | Topological domain | Cytoplasmic | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000382722 | 27 | 38 | 1116_1136 | 886 | 1138.0 | Transmembrane | Helical | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000585708 | 27 | 37 | 1116_1136 | 822 | 1091.0 | Transmembrane | Helical | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000586184 | 27 | 37 | 1116_1136 | 886 | 1155.0 | Transmembrane | Helical | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000588077 | 27 | 38 | 1116_1136 | 822 | 1074.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 169_181 | 57 | 387.0 | Topological domain | Extracellular |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 1_147 | 57 | 387.0 | Topological domain | Cytoplasmic |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 203_213 | 57 | 387.0 | Topological domain | Cytoplasmic |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 235_245 | 57 | 387.0 | Topological domain | Extracellular |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 267_273 | 57 | 387.0 | Topological domain | Cytoplasmic |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 295_309 | 57 | 387.0 | Topological domain | Extracellular |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 331_348 | 57 | 387.0 | Topological domain | Cytoplasmic |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 370_386 | 57 | 387.0 | Topological domain | Extracellular |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 148_168 | 57 | 387.0 | Transmembrane | Helical%3B Name%3D1 |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 182_202 | 57 | 387.0 | Transmembrane | Helical%3B Name%3D2 |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 214_234 | 57 | 387.0 | Transmembrane | Helical%3B Name%3D3 |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 246_266 | 57 | 387.0 | Transmembrane | Helical%3B Name%3D4 |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 274_294 | 57 | 387.0 | Transmembrane | Helical%3B Name%3D5 |
Hgene | ADIPOR2 | chr12:1863680 | chr12:1919506 | ENST00000357103 | + | 2 | 8 | 349_369 | 57 | 387.0 | Transmembrane | Helical%3B Name%3D7 |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000382722 | 27 | 38 | 291_473 | 886 | 1138.0 | Domain | VWFA | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000382722 | 27 | 38 | 487_580 | 886 | 1138.0 | Domain | Note=Cache | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000585708 | 27 | 37 | 291_473 | 822 | 1091.0 | Domain | VWFA | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000585708 | 27 | 37 | 487_580 | 822 | 1091.0 | Domain | Note=Cache | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000586184 | 27 | 37 | 291_473 | 886 | 1155.0 | Domain | VWFA | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000586184 | 27 | 37 | 487_580 | 886 | 1155.0 | Domain | Note=Cache | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000588077 | 27 | 38 | 291_473 | 822 | 1074.0 | Domain | VWFA | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000588077 | 27 | 38 | 487_580 | 822 | 1074.0 | Domain | Note=Cache | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000382722 | 27 | 38 | 297_301 | 886 | 1138.0 | Motif | Note=MIDAS-like motif | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000585708 | 27 | 37 | 297_301 | 822 | 1091.0 | Motif | Note=MIDAS-like motif | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000586184 | 27 | 37 | 297_301 | 886 | 1155.0 | Motif | Note=MIDAS-like motif | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000588077 | 27 | 38 | 297_301 | 822 | 1074.0 | Motif | Note=MIDAS-like motif | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000382722 | 27 | 38 | 20_1115 | 886 | 1138.0 | Topological domain | Extracellular | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000585708 | 27 | 37 | 20_1115 | 822 | 1091.0 | Topological domain | Extracellular | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000586184 | 27 | 37 | 20_1115 | 886 | 1155.0 | Topological domain | Extracellular | |
Tgene | CACNA2D4 | chr12:1863680 | chr12:1919506 | ENST00000588077 | 27 | 38 | 20_1115 | 822 | 1074.0 | Topological domain | Extracellular |
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Fusion Gene Sequence for ADIPOR2-CACNA2D4 |
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Fusion Gene PPI Analysis for ADIPOR2-CACNA2D4 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ADIPOR2-CACNA2D4 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ADIPOR2-CACNA2D4 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ADIPOR2 | C0021361 | Female infertility | 1 | CTD_human |
Hgene | ADIPOR2 | C0038279 | Sterility, Postpartum | 1 | CTD_human |
Hgene | ADIPOR2 | C0341869 | Subfertility, Female | 1 | CTD_human |
Hgene | ADIPOR2 | C0917730 | Female sterility | 1 | CTD_human |
Tgene | C0339535 | Night blindness, congenital stationary | 2 | GENOMICS_ENGLAND;ORPHANET | |
Tgene | C1864849 | RETINAL CONE DYSTROPHY 4 | 1 | CTD_human;GENOMICS_ENGLAND | |
Tgene | C3489532 | Cone-Rod Dystrophy 2 | 1 | ORPHANET |