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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:EFCC1-PGC (FusionGDB2 ID:HG79825TG5225) |
Fusion Gene Summary for EFCC1-PGC |
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Fusion gene information | Fusion gene name: EFCC1-PGC | Fusion gene ID: hg79825tg5225 | Hgene | Tgene | Gene symbol | EFCC1 | PGC | Gene ID | 79825 | 5225 |
Gene name | EF-hand and coiled-coil domain containing 1 | progastricsin | |
Synonyms | C3orf73|CCDC48 | PEPC|PGII | |
Cytomap | ('EFCC1')('PGC') 3q21.3 | 6p21.1 | |
Type of gene | protein-coding | protein-coding | |
Description | EF-hand and coiled-coil domain-containing protein 1EF-hand domain-containing protein ENSP00000381169coiled-coil domain containing 48coiled-coil domain-containing protein 48 | gastricsinpepsin Cpepsinogen Cpepsinogen group IIpreprogastricsin | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000436022, ENST00000480450, | ||
Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 24 X 21 X 8=4032 |
# samples | 1 | 25 | |
** MAII score | log2(1/1*10)=3.32192809488736 | log2(25/4032*10)=-4.01149563883783 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: EFCC1 [Title/Abstract] AND PGC [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | EFCC1(128758597)-PGC(41711124), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | EFCC1-PGC seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. EFCC1-PGC seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. EFCC1-PGC seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-97-A4M3-01A | EFCC1 | chr3 | 128758597 | + | PGC | chr6 | 41711124 | - |
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Fusion Gene ORF analysis for EFCC1-PGC |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000436022 | ENST00000373025 | EFCC1 | chr3 | 128758597 | + | PGC | chr6 | 41711124 | - |
Frame-shift | ENST00000436022 | ENST00000425343 | EFCC1 | chr3 | 128758597 | + | PGC | chr6 | 41711124 | - |
In-frame | ENST00000480450 | ENST00000373025 | EFCC1 | chr3 | 128758597 | + | PGC | chr6 | 41711124 | - |
In-frame | ENST00000480450 | ENST00000425343 | EFCC1 | chr3 | 128758597 | + | PGC | chr6 | 41711124 | - |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000480450 | EFCC1 | chr3 | 128758597 | + | ENST00000373025 | PGC | chr6 | 41711124 | - | 3626 | 2646 | 0 | 1832 | 610 |
ENST00000480450 | EFCC1 | chr3 | 128758597 | + | ENST00000425343 | PGC | chr6 | 41711124 | - | 3403 | 2646 | 0 | 1832 | 610 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000480450 | ENST00000373025 | EFCC1 | chr3 | 128758597 | + | PGC | chr6 | 41711124 | - | 0.046800192 | 0.9531998 |
ENST00000480450 | ENST00000425343 | EFCC1 | chr3 | 128758597 | + | PGC | chr6 | 41711124 | - | 0.057442527 | 0.9425575 |
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Fusion Genomic Features for EFCC1-PGC |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for EFCC1-PGC |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:128758597/chr6:41711124) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | EFCC1 | chr3:128758597 | chr6:41711124 | ENST00000436022 | + | 1 | 8 | 196_303 | 0 | 162.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | EFCC1 | chr3:128758597 | chr6:41711124 | ENST00000436022 | + | 1 | 8 | 479_533 | 0 | 162.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | EFCC1 | chr3:128758597 | chr6:41711124 | ENST00000480450 | + | 1 | 8 | 196_303 | 0 | 599.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | EFCC1 | chr3:128758597 | chr6:41711124 | ENST00000480450 | + | 1 | 8 | 479_533 | 0 | 599.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | EFCC1 | chr3:128758597 | chr6:41711124 | ENST00000436022 | + | 1 | 8 | 175_184 | 0 | 162.0 | Compositional bias | Note=Poly-Arg |
Hgene | EFCC1 | chr3:128758597 | chr6:41711124 | ENST00000436022 | + | 1 | 8 | 582_589 | 0 | 162.0 | Compositional bias | Note=Poly-Ala |
Hgene | EFCC1 | chr3:128758597 | chr6:41711124 | ENST00000480450 | + | 1 | 8 | 175_184 | 0 | 599.0 | Compositional bias | Note=Poly-Arg |
Hgene | EFCC1 | chr3:128758597 | chr6:41711124 | ENST00000480450 | + | 1 | 8 | 582_589 | 0 | 599.0 | Compositional bias | Note=Poly-Ala |
Hgene | EFCC1 | chr3:128758597 | chr6:41711124 | ENST00000436022 | + | 1 | 8 | 54_89 | 0 | 162.0 | Domain | EF-hand |
Hgene | EFCC1 | chr3:128758597 | chr6:41711124 | ENST00000480450 | + | 1 | 8 | 54_89 | 0 | 599.0 | Domain | EF-hand |
Tgene | PGC | chr3:128758597 | chr6:41711124 | ENST00000373025 | 2 | 9 | 73_385 | 109 | 389.0 | Domain | Peptidase A1 | |
Tgene | PGC | chr3:128758597 | chr6:41711124 | ENST00000425343 | 2 | 7 | 73_385 | 109 | 316.0 | Domain | Peptidase A1 |
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Fusion Gene Sequence for EFCC1-PGC |
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>25328_25328_1_EFCC1-PGC_EFCC1_chr3_128758597_ENST00000480450_PGC_chr6_41711124_ENST00000373025_length(transcript)=3626nt_BP=2646nt ATGGAGCCGGTCAGCACGGGCGCGGAGGCCGGCATGGAGGGCGCGGGAGGTGACCCGTACCGGCGACCTGCGCGGCGCACGCAGTGGCTG CTGAGCGCCCTGGCGCACCACTACGGGCTGGACCGCGGCGTGGAGAACGAGATCGTGGTGCTGGCCACCGGCCTGGACCAGTACCTGCAG GAGGTCTTCCACCACCTGGACTGCCGCGGCGCCGGCCGTCTGCCCCGCGCCGACTTCCGAGCGCTCTGCGCTGTGCTGGGGCTGCGCGCG GAGGGGGCCACCACGGCCGGGCAGGCAGCAGGTGACGGGAACTCCAGAGATGTGACCCCCGGGGATGCGGCCGCTGAGTTGGCCACGGAC GGGGACTCAGATACCGATGAAGAGGCGCGCCTGGCGCTGCGCGCCGAGCCGCCGGAGCTCACCTTCCGCCAGTTCCACGCGCGCCTCTGT GGCTACTTCGGCACCCGTGCGGGGCCCCGGCTGCCCCGCGGCGCTCTCAGCGAGCACATCGAGACGCAGATCCGCCTGCGCCGTCCGCGC CGCCGCCGCCGCCCGCCCTGCGCGCCTGGCCCCGACAGCGGTCCTGACTGTGAGCGCGTTGCGCGGCTGGAGGAGGAGAATAGCAGCTTG CGCGAGTTGGTGGAGGACCTGCGCGCCGCGCTGCAGAGCAGTGATGCGCGCTGCCTAGCACTGCAGGTCGGACTCTGGAAGAGCCAGGCG AGCACCCACGAGATGGGGCACGGCGGGCCGGAGGCTGCGGTGCGGGAGCTGCGTCAGGCGCAGGGCGCCCTGGCTGCGGCGGAGGCCCGC GCTGGGCGGCTGCGCCGTGGCCAGGCCGAGGTGCGGCGGCGCGCGGAGGAGGCCCGGCAGGTGGTGCTGCGCAGCCTGCACCGCGTGCGA GAGCTGGAGGCGCTGGCGCAACAGGTGCCCGGCTTGCAGCGCTGGGTGCGGCGGCTGGAGGCGGAGCTGCAACGCTACAGGTCAGAGGAT TCCCAGCTCCCAACCCCGCAGCTAGCCAACCCAGAGCCAGGAGACAAGAGTAATGAACCTGAAGATGCTGGGACCAGAGACCCAGACCCC ACTCCAGAGGGAGCCTGGCAGTCAGACAGCAGCTCTGGAAGCAGAGCCCTGGATGAAGTGGACGAGCAGCTGTTCCGCTCCGTGGAGGGC CAGGCCGCCTCTGACGAGGAGGAGGTGGAGGAGGAGAGGTGGCAGGAGGAGAAGAAGACGCCGGCAGCCGAGGCCAAGACACTGCTGGCC CGGCTCTCCAGCTGCAGAGGCAGGTGTGATGACCAGACGGCGGAGAAGCTCATGACTTACTTTGGTCACTTCGGCGGTGCCAACCATGCC CATACCCTGGGGGAGCTGGAGGCCTGCATTGCCATGCTGGTGGAGCAGCTGAGGACTCAGGGCTGCGGTGGGAGGACCCTGGGGACCTCT GAGGAGGAGGCAGAGTTGCAGCAGAAGGTGGAAGAGAATGAGCACCTGAGGCTGGAGCTGCAGATGGTAGAGACCGAGAGGGTGCGGCTG TCCCTGCTGGAGGAGAAGCTGGTGGACGTGCTGCAGCTCCTGCAGAGGCTCCGGGACCTGAACATATCGAAAAGAGCCCTGGGGAAGATT TTGCTGAGCACGCTGGACGCTTTCAGGGACCCCACCCACGAGCCTTGGCTGCCTGCCAGCTGTTGCGGAGACAGCCCTCGGCACCAGCCT CTGCAGCAGCTGCGCTCACCAACCCCCTCCTCGTCTCCTGCTGAGGTTACTGGCCCACCCTGTGGGCACCCTGCTCAGCCTGACTGCCTT TGGACCAGCCTCCATGATCAGCCCAACCACTGACAGCTGGTCTGACCACCGTCACATCATCAGAACTTGAGTCTCTGCTGGCTCCTTCCA AGGTTAAGCCCGAGCCCAGAGCCTCCCATTGCAGCACCTGGCAGCCACCCCTTCCTCGGGCTCCTCCACATTACCTCGCAGCCCCTGCAT TCCTGCCACCAGAGTCCACATTAAAGCCCTGCAGTTGCTGGATCAGCCTGCACCTGATGCTGTATCTTTCCCCTGCCCTCAGGGCAGAGA TGCCCACTTTCTGACTGAGTCTGACCCCAAATCTCTTCCCCAGAGTTTCAGGATCTCCTCCCCTCCCAGCACTGTCTCCTTCCTCCCACT GGCATGCCTGCTGCAACGGAGACTGGGCCCAACCTTTGGGATACCTGGTCTGTAGGAAAGCACTCCACACCCCAGGAAATGTTGATGACT AGGAAAGGCTGAGGGAATTCCAAGGAAGGAACAATCACTGTAGGCTCCCTGGTAGAAGCTGGCCTTGAACCAGCTCTAGAGGACAGGTAG GATTTAGACAGGTAAAGAAAGGAGGGAAGGGCATAGAATCTAAGGTAATGGCAAGAGCAAAGGTGTGGAACCAGAGGGGGGCCCCAGGAA TGCAGTGCTTGGAGCCCCTGCTCCTGAACACGCATTAACTCCTGAACTGCGAGCCCCTCCTCCTGAACTGCGTCATGGGGTTGCAGGAAG GAGTAGGCCAAGATACCCAGTCTCACCTAACTTAGACTGTCATTAGAGAGAAAGATCCATTGCCAAACAGTGCCATGGGGGTGAAACCAG TGCTAAATGGAGGTAAAATAAAGTTTGTAAGAGCCCCCAGTCACTCCCGCTTCAACCCCAGCGAGTCGTCCACCTACTCCACCAATGGGC AGACCTTCTCCCTGCAGTATGGCAGTGGCAGCCTCACCGGCTTCTTTGGCTATGACACCCTGACTGTCCAGAGCATCCAGGTCCCCAACC AGGAGTTCGGCTTGAGTGAGAATGAGCCTGGTACCAACTTCGTCTATGCGCAGTTTGATGGCATCATGGGCCTGGCCTACCCTGCTCTGT CCGTGGATGAGGCCACCACAGCTATGCAGGGCATGGTGCAGGAGGGCGCCCTCACCAGCCCCGTCTTCAGCGTCTACCTCAGCAACCAGC AGGGCTCCAGCGGGGGAGCGGTTGTCTTTGGGGGTGTGGATAGCAGCCTGTACACGGGGCAGATCTACTGGGCGCCTGTCACCCAGGAAC TCTACTGGCAGATTGGCATTGAAGAGTTCCTCATCGGCGGCCAGGCCTCCGGCTGGTGTTCTGAGGGTTGCCAGGCCATCGTGGACACAG GCACCTCTCTGCTCACTGTGCCCCAGCAGTACATGAGTGCTCTTCTGCAGGCCACAGGGGCCCAGGAGGATGAGTATGGACAGTTTCTCG TGAACTGTAACAGCATTCAGAATCTGCCCAGCTTGACCTTCATCATCAATGGTGTGGAGTTCCCTCTGCCACCTTCCTCCTATATCCTCA GTAACAACGGCTACTGCACCGTGGGAGTCGAGCCCACCTACCTGTCCTCCCAGAACGGCCAGCCCCTGTGGATCCTCGGGGATGTCTTCC TCAGGTCCTACTATTCCGTCTACGACTTGGGCAACAACAGAGTAGGCTTTGCCACTGCCGCCTAGACTTGCTGCCTCGACACGTGGGCTC CCCTCTTCCTCTTGACCCTGCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTGGACTCTGGACTTT >25328_25328_1_EFCC1-PGC_EFCC1_chr3_128758597_ENST00000480450_PGC_chr6_41711124_ENST00000373025_length(amino acids)=610AA_BP= MEPVSTGAEAGMEGAGGDPYRRPARRTQWLLSALAHHYGLDRGVENEIVVLATGLDQYLQEVFHHLDCRGAGRLPRADFRALCAVLGLRA EGATTAGQAAGDGNSRDVTPGDAAAELATDGDSDTDEEARLALRAEPPELTFRQFHARLCGYFGTRAGPRLPRGALSEHIETQIRLRRPR RRRRPPCAPGPDSGPDCERVARLEEENSSLRELVEDLRAALQSSDARCLALQVGLWKSQASTHEMGHGGPEAAVRELRQAQGALAAAEAR AGRLRRGQAEVRRRAEEARQVVLRSLHRVRELEALAQQVPGLQRWVRRLEAELQRYRSEDSQLPTPQLANPEPGDKSNEPEDAGTRDPDP TPEGAWQSDSSSGSRALDEVDEQLFRSVEGQAASDEEEVEEERWQEEKKTPAAEAKTLLARLSSCRGRCDDQTAEKLMTYFGHFGGANHA HTLGELEACIAMLVEQLRTQGCGGRTLGTSEEEAELQQKVEENEHLRLELQMVETERVRLSLLEEKLVDVLQLLQRLRDLNISKRALGKI -------------------------------------------------------------- >25328_25328_2_EFCC1-PGC_EFCC1_chr3_128758597_ENST00000480450_PGC_chr6_41711124_ENST00000425343_length(transcript)=3403nt_BP=2646nt ATGGAGCCGGTCAGCACGGGCGCGGAGGCCGGCATGGAGGGCGCGGGAGGTGACCCGTACCGGCGACCTGCGCGGCGCACGCAGTGGCTG CTGAGCGCCCTGGCGCACCACTACGGGCTGGACCGCGGCGTGGAGAACGAGATCGTGGTGCTGGCCACCGGCCTGGACCAGTACCTGCAG GAGGTCTTCCACCACCTGGACTGCCGCGGCGCCGGCCGTCTGCCCCGCGCCGACTTCCGAGCGCTCTGCGCTGTGCTGGGGCTGCGCGCG GAGGGGGCCACCACGGCCGGGCAGGCAGCAGGTGACGGGAACTCCAGAGATGTGACCCCCGGGGATGCGGCCGCTGAGTTGGCCACGGAC GGGGACTCAGATACCGATGAAGAGGCGCGCCTGGCGCTGCGCGCCGAGCCGCCGGAGCTCACCTTCCGCCAGTTCCACGCGCGCCTCTGT GGCTACTTCGGCACCCGTGCGGGGCCCCGGCTGCCCCGCGGCGCTCTCAGCGAGCACATCGAGACGCAGATCCGCCTGCGCCGTCCGCGC CGCCGCCGCCGCCCGCCCTGCGCGCCTGGCCCCGACAGCGGTCCTGACTGTGAGCGCGTTGCGCGGCTGGAGGAGGAGAATAGCAGCTTG CGCGAGTTGGTGGAGGACCTGCGCGCCGCGCTGCAGAGCAGTGATGCGCGCTGCCTAGCACTGCAGGTCGGACTCTGGAAGAGCCAGGCG AGCACCCACGAGATGGGGCACGGCGGGCCGGAGGCTGCGGTGCGGGAGCTGCGTCAGGCGCAGGGCGCCCTGGCTGCGGCGGAGGCCCGC GCTGGGCGGCTGCGCCGTGGCCAGGCCGAGGTGCGGCGGCGCGCGGAGGAGGCCCGGCAGGTGGTGCTGCGCAGCCTGCACCGCGTGCGA GAGCTGGAGGCGCTGGCGCAACAGGTGCCCGGCTTGCAGCGCTGGGTGCGGCGGCTGGAGGCGGAGCTGCAACGCTACAGGTCAGAGGAT TCCCAGCTCCCAACCCCGCAGCTAGCCAACCCAGAGCCAGGAGACAAGAGTAATGAACCTGAAGATGCTGGGACCAGAGACCCAGACCCC ACTCCAGAGGGAGCCTGGCAGTCAGACAGCAGCTCTGGAAGCAGAGCCCTGGATGAAGTGGACGAGCAGCTGTTCCGCTCCGTGGAGGGC CAGGCCGCCTCTGACGAGGAGGAGGTGGAGGAGGAGAGGTGGCAGGAGGAGAAGAAGACGCCGGCAGCCGAGGCCAAGACACTGCTGGCC CGGCTCTCCAGCTGCAGAGGCAGGTGTGATGACCAGACGGCGGAGAAGCTCATGACTTACTTTGGTCACTTCGGCGGTGCCAACCATGCC CATACCCTGGGGGAGCTGGAGGCCTGCATTGCCATGCTGGTGGAGCAGCTGAGGACTCAGGGCTGCGGTGGGAGGACCCTGGGGACCTCT GAGGAGGAGGCAGAGTTGCAGCAGAAGGTGGAAGAGAATGAGCACCTGAGGCTGGAGCTGCAGATGGTAGAGACCGAGAGGGTGCGGCTG TCCCTGCTGGAGGAGAAGCTGGTGGACGTGCTGCAGCTCCTGCAGAGGCTCCGGGACCTGAACATATCGAAAAGAGCCCTGGGGAAGATT TTGCTGAGCACGCTGGACGCTTTCAGGGACCCCACCCACGAGCCTTGGCTGCCTGCCAGCTGTTGCGGAGACAGCCCTCGGCACCAGCCT CTGCAGCAGCTGCGCTCACCAACCCCCTCCTCGTCTCCTGCTGAGGTTACTGGCCCACCCTGTGGGCACCCTGCTCAGCCTGACTGCCTT TGGACCAGCCTCCATGATCAGCCCAACCACTGACAGCTGGTCTGACCACCGTCACATCATCAGAACTTGAGTCTCTGCTGGCTCCTTCCA AGGTTAAGCCCGAGCCCAGAGCCTCCCATTGCAGCACCTGGCAGCCACCCCTTCCTCGGGCTCCTCCACATTACCTCGCAGCCCCTGCAT TCCTGCCACCAGAGTCCACATTAAAGCCCTGCAGTTGCTGGATCAGCCTGCACCTGATGCTGTATCTTTCCCCTGCCCTCAGGGCAGAGA TGCCCACTTTCTGACTGAGTCTGACCCCAAATCTCTTCCCCAGAGTTTCAGGATCTCCTCCCCTCCCAGCACTGTCTCCTTCCTCCCACT GGCATGCCTGCTGCAACGGAGACTGGGCCCAACCTTTGGGATACCTGGTCTGTAGGAAAGCACTCCACACCCCAGGAAATGTTGATGACT AGGAAAGGCTGAGGGAATTCCAAGGAAGGAACAATCACTGTAGGCTCCCTGGTAGAAGCTGGCCTTGAACCAGCTCTAGAGGACAGGTAG GATTTAGACAGGTAAAGAAAGGAGGGAAGGGCATAGAATCTAAGGTAATGGCAAGAGCAAAGGTGTGGAACCAGAGGGGGGCCCCAGGAA TGCAGTGCTTGGAGCCCCTGCTCCTGAACACGCATTAACTCCTGAACTGCGAGCCCCTCCTCCTGAACTGCGTCATGGGGTTGCAGGAAG GAGTAGGCCAAGATACCCAGTCTCACCTAACTTAGACTGTCATTAGAGAGAAAGATCCATTGCCAAACAGTGCCATGGGGGTGAAACCAG TGCTAAATGGAGGTAAAATAAAGTTTGTAAGAGCCCCCAGTCACTCCCGCTTCAACCCCAGCGAGTCGTCCACCTACTCCACCAATGGGC AGACCTTCTCCCTGCAGTATGGCAGTGGCAGCCTCACCGGCTTCTTTGGCTATGACACCCTGACTGTCCAGAGCATCCAGGTCCCCAACC AGGAGTTCGGCTTGAGTGAGAATGAGCCTGGTACCAACTTCGTCTATGCGCAGTTTGATGGCATCATGGGCCTGGCCTACCCTGCTCTGT CCGTGGATGAGGCCACCACAGCTATGCAGGGCATGGTGCAGGAGGGCGCCCTCACCAGCCCCGTCTTCAGCGTCTACCTCAGCAACCTGG TCCTGGAGTCTTCTGGTCTAGGTCCACTGCTGACCCCTAGCAGAGCAGCTCCACCCAGCTCCACACTCCAGCTACCAGAGAAGCCTCTGG AACAAACATGGAATATCCTTACCCCCTTCACCAAGACCCTACCTGTCTCCAATCTCAGCAGAAAAGTAACAAGCTGGGCCGGGGTGGGGA TCCCGGTGACATGTCTACCAGAGGCAGGAAGCGGAGGGGAGAGGAGAGCAGAGTGTGGGCTGGGGGTCCCAACCACTAGGGGACCCCCCA GAAGTCAGCATCATTCGGGAGCCTGAGGCGCTGGGAATTCCAAGGCCTGGCCAGAAAGCCCCAGTCTAAGGGACGCATCCCAGTCCCCAG >25328_25328_2_EFCC1-PGC_EFCC1_chr3_128758597_ENST00000480450_PGC_chr6_41711124_ENST00000425343_length(amino acids)=610AA_BP= MEPVSTGAEAGMEGAGGDPYRRPARRTQWLLSALAHHYGLDRGVENEIVVLATGLDQYLQEVFHHLDCRGAGRLPRADFRALCAVLGLRA EGATTAGQAAGDGNSRDVTPGDAAAELATDGDSDTDEEARLALRAEPPELTFRQFHARLCGYFGTRAGPRLPRGALSEHIETQIRLRRPR RRRRPPCAPGPDSGPDCERVARLEEENSSLRELVEDLRAALQSSDARCLALQVGLWKSQASTHEMGHGGPEAAVRELRQAQGALAAAEAR AGRLRRGQAEVRRRAEEARQVVLRSLHRVRELEALAQQVPGLQRWVRRLEAELQRYRSEDSQLPTPQLANPEPGDKSNEPEDAGTRDPDP TPEGAWQSDSSSGSRALDEVDEQLFRSVEGQAASDEEEVEEERWQEEKKTPAAEAKTLLARLSSCRGRCDDQTAEKLMTYFGHFGGANHA HTLGELEACIAMLVEQLRTQGCGGRTLGTSEEEAELQQKVEENEHLRLELQMVETERVRLSLLEEKLVDVLQLLQRLRDLNISKRALGKI -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for EFCC1-PGC |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for EFCC1-PGC |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for EFCC1-PGC |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |