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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:ACTR5-ZNF217 (FusionGDB2 ID:HG79913TG7764) |
Fusion Gene Summary for ACTR5-ZNF217 |
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Fusion gene information | Fusion gene name: ACTR5-ZNF217 | Fusion gene ID: hg79913tg7764 | Hgene | Tgene | Gene symbol | ACTR5 | ZNF217 | Gene ID | 79913 | 7764 |
Gene name | actin related protein 5 | zinc finger protein 217 | |
Synonyms | Arp5|INO80M | ZABC1 | |
Cytomap | ('ACTR5')('ZNF217') 20q11.23 | 20q13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | actin-related protein 5ARP5 actin related protein 5 homologINO80 complex subunit MhARP5sarcoma antigen NY-SAR-16 | zinc finger protein 217 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000243903, | ||
Fusion gene scores | * DoF score | 6 X 5 X 5=150 | 3 X 3 X 3=27 |
# samples | 6 | 3 | |
** MAII score | log2(6/150*10)=-1.32192809488736 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: ACTR5 [Title/Abstract] AND ZNF217 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ACTR5(37395020)-ZNF217(52188392), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | ACTR5-ZNF217 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ACTR5-ZNF217 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ACTR5-ZNF217 seems lost the major protein functional domain in Hgene partner, which is a epigenetic factor due to the frame-shifted ORF. ACTR5-ZNF217 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. ACTR5-ZNF217 seems lost the major protein functional domain in Tgene partner, which is a epigenetic factor due to the frame-shifted ORF. ACTR5-ZNF217 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. ACTR5-ZNF217 seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | ZNF217 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 17130829 |
Tgene | ZNF217 | GO:0006355 | regulation of transcription, DNA-templated | 18625718 |
Tgene | ZNF217 | GO:0045892 | negative regulation of transcription, DNA-templated | 16940172 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-55-8087-01A | ACTR5 | chr20 | 37395020 | + | ZNF217 | chr20 | 52188392 | - |
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Fusion Gene ORF analysis for ACTR5-ZNF217 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000243903 | ENST00000540425 | ACTR5 | chr20 | 37395020 | + | ZNF217 | chr20 | 52188392 | - |
Frame-shift | ENST00000243903 | ENST00000302342 | ACTR5 | chr20 | 37395020 | + | ZNF217 | chr20 | 52188392 | - |
In-frame | ENST00000243903 | ENST00000371471 | ACTR5 | chr20 | 37395020 | + | ZNF217 | chr20 | 52188392 | - |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000243903 | ACTR5 | chr20 | 37395020 | + | ENST00000371471 | ZNF217 | chr20 | 52188392 | - | 3803 | 1470 | 1 | 1503 | 500 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000243903 | ENST00000371471 | ACTR5 | chr20 | 37395020 | + | ZNF217 | chr20 | 52188392 | - | 0.000290008 | 0.99971 |
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Fusion Genomic Features for ACTR5-ZNF217 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for ACTR5-ZNF217 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr20:37395020/chr20:52188392) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ACTR5 | chr20:37395020 | chr20:52188392 | ENST00000243903 | + | 7 | 9 | 288_327 | 477 | 608.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | ACTR5 | chr20:37395020 | chr20:52188392 | ENST00000243903 | + | 7 | 9 | 355_384 | 477 | 608.0 | Coiled coil | Ontology_term=ECO:0000255 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000302342 | 2 | 5 | 128_150 | 1012 | 1239.3333333333333 | Zinc finger | C2H2-type 2 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000302342 | 2 | 5 | 156_178 | 1012 | 1239.3333333333333 | Zinc finger | C2H2-type 3 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000302342 | 2 | 5 | 216_238 | 1012 | 1239.3333333333333 | Zinc finger | C2H2-type 4 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000302342 | 2 | 5 | 375_397 | 1012 | 1239.3333333333333 | Zinc finger | C2H2-type 5 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000302342 | 2 | 5 | 471_493 | 1012 | 1239.3333333333333 | Zinc finger | C2H2-type 6 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000302342 | 2 | 5 | 499_521 | 1012 | 1239.3333333333333 | Zinc finger | C2H2-type 7 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000302342 | 2 | 5 | 65_88 | 1012 | 1239.3333333333333 | Zinc finger | C2H2-type 1 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000371471 | 3 | 6 | 128_150 | 1012 | 1229.3333333333333 | Zinc finger | C2H2-type 2 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000371471 | 3 | 6 | 156_178 | 1012 | 1229.3333333333333 | Zinc finger | C2H2-type 3 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000371471 | 3 | 6 | 216_238 | 1012 | 1229.3333333333333 | Zinc finger | C2H2-type 4 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000371471 | 3 | 6 | 375_397 | 1012 | 1229.3333333333333 | Zinc finger | C2H2-type 5 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000371471 | 3 | 6 | 471_493 | 1012 | 1229.3333333333333 | Zinc finger | C2H2-type 6 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000371471 | 3 | 6 | 499_521 | 1012 | 1229.3333333333333 | Zinc finger | C2H2-type 7 | |
Tgene | ZNF217 | chr20:37395020 | chr20:52188392 | ENST00000371471 | 3 | 6 | 65_88 | 1012 | 1229.3333333333333 | Zinc finger | C2H2-type 1 |
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Fusion Gene Sequence for ACTR5-ZNF217 |
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>1879_1879_1_ACTR5-ZNF217_ACTR5_chr20_37395020_ENST00000243903_ZNF217_chr20_52188392_ENST00000371471_length(transcript)=3803nt_BP=1470nt ACTGCGCCGAGGGGCGGGGCTGGACGCGCGCTCCAAGATGGCGGCGAACGTGTTCCCGTTCCGCGACGCCCGTGCCGCACCGGACCCAGT GCTGGAGGCCGGCCCGGTGGCACACGGGCCACTGCCGGTACCGCTGGTGCTGGACAACGGGTCGTTCCAAGTCCGCGCTGGCTGGGCGTG TCCCGGGCAGGACCCAGGTCCCGAGCCGCGCCTGCAGTTCCGCGCGGTGTGCGCCCGCGGTCGTGGCGGGGCACGGGGCGCGTCGGGCCC GCAGGTGGGGAACGCTCTGGGCAGCCTGGAGCCACTGCGCTGGATGCTGCGCTCGCCCTTCGACCGCAACGTGCCGGTCAACCTGGAGCT TCAGGAGTTGCTGCTGGACTACAGCTTCCAGCACCTGGGTGTCTCCTCACAGGGCTGTGTTGATCATCCCATAGTTTTGACAGAAGCTGT GTGCAACCCACTGTATTCACGGCAAATGATGTCTGAGCTTCTTTTTGAGTGCTACGGGATTCCCAAGGTTGCCTATGGAATAGACAGCCT CTTCAGCTTCTACCACAATAAGCCAAAGAACTCGATGTGCAGTGGGCTAATCATTTCATCTGGATACCAGTGTACGCATGTTTTACCCAT CTTAGAAGGGAGATTAGATGCTAAAAACTGCAAGCGCATCAATCTTGGAGGAAGCCAAGCAGCTGGTTACCTCCAGCGTCTCCTCCAGCT GAAGTACCCTGGGCACCTGGCAGCCATCACCCTCAGCCGCATGGAGGAGATTCTGCATGAGCACAGCTACATCGCTGAGGATTATGTGGA AGAATTACACAAATGGCGGTGTCCTGATTATTATGAGAATAATGTCCACAAGATGCAGCTCCCATTTTCCAGCAAGCTCCTGGGCAGCAC TCTGACCTCTGAGGAGAAACAAGAAAGGCGGCAGCAGCAATTGCGGCGGCTGCAGGAGCTCAATGCCCGGCGGCGGGAGGAGAAGCTGCA GCTGGATCAGGAGCGTCTGGACCGACTGCTATATGTGCAGGAACTTCTAGAGGATGGCCAGATGGATCAGTTTCACAAAGCTCTGATAGA GCTGAATATGGACTCCCCAGAAGAGCTGCAGTCCTACATCCAGAAGCTCAGTATAGCAGTGGAGCAGGCTAAGCAGAAAATCCTCCAAGC GGAAGTCAACCTCGAGGTGGATGTGGTAGACAGCAAGCCAGAGACCCCTGACCTGGAGCAGCTGGAGCCGTCTTTGGAAGATGTGGAAAG CATGAATGATTTTGATCCCTTGTTTTCAGAGGAAACACCTGGAGTGGAGAAGCCGGTCACCACTGTTCAGCCCGTGTTTAACTTGGCAGC ATATCATCAGCTATTTGTTGGGACAGAAAGAATTCGAGCTCCAGAGATTATTTTCCAGCCATCTCTCATAGGAGAAGAACAGGCTGGGAT TGCAGAGACTCTTCAGTACATTCTGGACAGGAAAAAGGCCTGTGTCATATCAACACTTATCTAACAGCATGGCACAAAAGAGAAACTATG AGAATTTTATTGGGAATGCACATTATCGACCAAATGACAAAAAAACTTGATTCACTAATTAGGGGGAAAAAAGGTCTTGGTGGATGTCAG TGCTTACTCCCCATGAAATTAAATTTTACTTCATCCTTTGAGAAGCGAATGGTGAAAGCTACTGAAATAAGCTGTGATTGTACTGTACAT AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTTAACTTTTGTACCAAATAGCAATACAAACTAGTTGGA ACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATATTTTTCTTAGAATTGACCAAATAAGAAGTGGAA TTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGGTGGGGCGGGATGGGGGAAAAGTATATAATGCTTGCACCTCAGGT AAAAATCTGTAAATATCTAAGTTGTAAACCTGCTTGTTCAAATACTGTGTGTATTCCTTTTCTCTAATGCAGCTCATCACTTGGAGCAGT TTCTGCTATTGTGCTCTTTCATTTAAAATGTATGTTTTTTTTTTTTTAAACTGTCAATGATTTTGTATTATGTTGAATCCACCCAAATCT ATTGTTGTCTTAAAATTGTTAATGGAAGTATTGACCCTCTATGATATGTGCTGCAGATATCGAGGTCAGCCATTCGGAAGCTGGCAGCAT TTTATCGCAACTTTGAGCATCTCAGATGGGGAAGGCACCTTCTTCCTCGCCTCTCCAGATTGTCCTGGAACCTCCAGGATCCTTGACTGA GGGCGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATA AACTGTATGTGCAGTTATTTAAATTTGTTTCTGTCAAATTAATCATTTTTGTTGGACGATTCAGTGGCGGGGGGGTTTTGCCTAAATTAG TATATAAAAACAAAAATGCTAAATTATATCTGTGAATTGCAGGTATTGGGGAACAGTTTTAAGGGAAATTTTGGGGGGAACATTTTAGGT TTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATACTAGAGTTGATTATAGACACATTGATTTTGAATAAGGAA CTGCTGGCCGAGCCCGCTGGGAGTCTAGAAAGAGAAAATCTGTTTCTAGACCTCAGTTATTTTCCCATTTTTGGTTGTTTTGAAGCAGTA ACATTTTTCTCAGTGCACATGCAATTTGGGTTTTAGAGAAGATGGCCACCAGCTGGCTTCCTAGATATTTTAAACTTTTGTTCTTTAATA TGCTGTCCATGGCTGAGTTTATTAGTACATGGGCTTAGTGACCACAAAATATTTTATTAAGAAACTGTTTCAAAAATAAATTTGCACTGT TCATTTTTCTGGCCTCGCTGTTCTCCATAGAGCAAGGGTAATCCTAGAAAAAATTTTTTTTTTTTAAATTATGCAACGTAAGATGTCCTC CTTGATAGAAGTCTTAGCTCCTGTGTTACAAGGGAGAACTCATTTGAGATCAGTCTGTTGGCATTGCAATGAAGTGCTTTGTATCAGGAA AGTGTACACTATTGACCTTTTTTCCTGTTCACAAGCTGAGCCATATGTACATAATCTAGATTTTGTTTTCATAGTTTTGCACTTTTATAG CCTATTTTTGAAGATTAACACATTTGCAAGATGATTGACTCAATCTTTGCCTAATCCAATGAGTGTTACAGAGAGCTTGCTGTGACTAGA ACCATAAATCTTAAAGGGGGTATGTGATAATAGAGGGCTGGAATTTAAACCTGTATTTAAAAAAAAGAATCACCAAATCTATTTGAAAAC AAGTCGATTTGTATTATGCTGGAATTTTTTGGGCTTTCAGATTTCTCTTTTTAACCACATTTCTGAATGTATAAAAATACCAATTATTTT CCTACAGCCCTTTGTACTTCAAAATATGTTTTTGTGTCCATCAGTATTAACTATTGGTATACTACTGGTTTTATATTTTTTTTTCTTTGA GACAACAGTACATATAATAGAGGTACAATTCGTTGGATTTTTGTTTATGTATTTATTTCATTCCAGTTTGATTTATTTTAATTGTTGATA CTTAAGTTGTCGAACAGTAGACATTACTTGTTTTATTTATGATATATTTCAGCTTAAAGTTATGTTATTATATGTGGAAGTGTAAATATA >1879_1879_1_ACTR5-ZNF217_ACTR5_chr20_37395020_ENST00000243903_ZNF217_chr20_52188392_ENST00000371471_length(amino acids)=500AA_BP= LRRGAGLDARSKMAANVFPFRDARAAPDPVLEAGPVAHGPLPVPLVLDNGSFQVRAGWACPGQDPGPEPRLQFRAVCARGRGGARGASGP QVGNALGSLEPLRWMLRSPFDRNVPVNLELQELLLDYSFQHLGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYGIPKVAYGIDSL FSFYHNKPKNSMCSGLIISSGYQCTHVLPILEGRLDAKNCKRINLGGSQAAGYLQRLLQLKYPGHLAAITLSRMEEILHEHSYIAEDYVE ELHKWRCPDYYENNVHKMQLPFSSKLLGSTLTSEEKQERRQQQLRRLQELNARRREEKLQLDQERLDRLLYVQELLEDGQMDQFHKALIE LNMDSPEELQSYIQKLSIAVEQAKQKILQAEVNLEVDVVDSKPETPDLEQLEPSLEDVESMNDFDPLFSEETPGVEKPVTTVQPVFNLAA -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ACTR5-ZNF217 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ACTR5-ZNF217 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ACTR5-ZNF217 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | C3658266 | Prostatic Cancer, Castration-Resistant | 1 | CTD_human | |
Tgene | C3658267 | Prostatic Neoplasms, Castration-Resistant | 1 | CTD_human |