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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:CANX-SQSTM1 (FusionGDB2 ID:HG821TG8878) |
Fusion Gene Summary for CANX-SQSTM1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: CANX-SQSTM1 | Fusion gene ID: hg821tg8878 | Hgene | Tgene | Gene symbol | CANX | SQSTM1 | Gene ID | 821 | 8878 |
Gene name | calnexin | sequestosome 1 | |
Synonyms | CNX|IP90|P90 | A170|DMRV|FTDALS3|NADGP|OSIL|PDB3|ZIP3|p60|p62|p62B | |
Cytomap | ('CANX')('SQSTM1') 5q35.3 | 5q35.3 | |
Type of gene | protein-coding | protein-coding | |
Description | calnexinepididymis secretory sperm binding proteinmajor histocompatibility complex class I antigen-binding protein p88 | sequestosome-1EBI3-associated protein of 60 kDaEBI3-associated protein p60EBIAPautophagy receptor p62oxidative stress induced likephosphotyrosine independent ligand for the Lck SH2 domain p62phosphotyrosine-independent ligand for the Lck SH2 domain | |
Modification date | 20200313 | 20200327 | |
UniProtAcc | P27824 | Q13501 | |
Ensembl transtripts involved in fusion gene | ENST00000503126, ENST00000247461, ENST00000415618, ENST00000452673, ENST00000504734, ENST00000512607, | ENST00000247461, ENST00000415618, ENST00000452673, ENST00000504734, ENST00000512607, ENST00000503126, | |
Fusion gene scores | * DoF score | 15 X 16 X 11=2640 | 33 X 21 X 17=11781 |
# samples | 21 | 38 | |
** MAII score | log2(21/2640*10)=-3.65207669657969 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(38/11781*10)=-4.95431877505661 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CANX [Title/Abstract] AND SQSTM1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CANX(179134191)-SQSTM1(179260032), # samples:1 CANX(179137066)-SQSTM1(179260032), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | CANX-SQSTM1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CANX-SQSTM1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CANX-SQSTM1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CANX-SQSTM1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | SQSTM1 | GO:0006914 | autophagy | 20452972 |
Tgene | SQSTM1 | GO:0007032 | endosome organization | 27368102 |
Tgene | SQSTM1 | GO:0031397 | negative regulation of protein ubiquitination | 20452972 |
Tgene | SQSTM1 | GO:0061635 | regulation of protein complex stability | 25127057 |
Tgene | SQSTM1 | GO:1905719 | protein localization to perinuclear region of cytoplasm | 27368102 |
Fusion gene breakpoints across CANX (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across SQSTM1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-78-8640-01A | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
ChimerDB4 | OV | TCGA-20-0991-01A | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
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Fusion Gene ORF analysis for CANX-SQSTM1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000503126 | ENST00000376929 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
3UTR-3CDS | ENST00000503126 | ENST00000376929 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
3UTR-intron | ENST00000503126 | ENST00000360718 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
3UTR-intron | ENST00000503126 | ENST00000360718 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
3UTR-intron | ENST00000503126 | ENST00000389805 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
3UTR-intron | ENST00000503126 | ENST00000389805 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
3UTR-intron | ENST00000503126 | ENST00000402874 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
3UTR-intron | ENST00000503126 | ENST00000402874 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
3UTR-intron | ENST00000503126 | ENST00000506690 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
3UTR-intron | ENST00000503126 | ENST00000506690 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
3UTR-intron | ENST00000503126 | ENST00000510187 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
3UTR-intron | ENST00000503126 | ENST00000510187 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000247461 | ENST00000360718 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000247461 | ENST00000360718 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000247461 | ENST00000389805 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000247461 | ENST00000389805 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000247461 | ENST00000402874 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000247461 | ENST00000402874 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000247461 | ENST00000506690 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000247461 | ENST00000506690 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000247461 | ENST00000510187 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000247461 | ENST00000510187 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000415618 | ENST00000360718 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000415618 | ENST00000360718 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000415618 | ENST00000389805 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000415618 | ENST00000389805 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000415618 | ENST00000402874 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000415618 | ENST00000402874 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000415618 | ENST00000506690 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000415618 | ENST00000506690 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000415618 | ENST00000510187 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000415618 | ENST00000510187 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000452673 | ENST00000360718 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000452673 | ENST00000360718 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000452673 | ENST00000389805 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000452673 | ENST00000389805 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000452673 | ENST00000402874 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000452673 | ENST00000402874 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000452673 | ENST00000506690 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000452673 | ENST00000506690 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000452673 | ENST00000510187 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000452673 | ENST00000510187 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000504734 | ENST00000360718 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000504734 | ENST00000360718 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000504734 | ENST00000389805 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000504734 | ENST00000389805 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000504734 | ENST00000402874 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000504734 | ENST00000402874 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000504734 | ENST00000506690 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000504734 | ENST00000506690 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000504734 | ENST00000510187 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000504734 | ENST00000510187 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000512607 | ENST00000360718 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000512607 | ENST00000389805 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000512607 | ENST00000402874 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000512607 | ENST00000506690 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
5CDS-intron | ENST00000512607 | ENST00000510187 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
In-frame | ENST00000247461 | ENST00000376929 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
In-frame | ENST00000247461 | ENST00000376929 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
In-frame | ENST00000415618 | ENST00000376929 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
In-frame | ENST00000415618 | ENST00000376929 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
In-frame | ENST00000452673 | ENST00000376929 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
In-frame | ENST00000452673 | ENST00000376929 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
In-frame | ENST00000504734 | ENST00000376929 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
In-frame | ENST00000504734 | ENST00000376929 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
In-frame | ENST00000512607 | ENST00000376929 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + |
intron-3CDS | ENST00000512607 | ENST00000376929 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
intron-intron | ENST00000512607 | ENST00000360718 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
intron-intron | ENST00000512607 | ENST00000389805 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
intron-intron | ENST00000512607 | ENST00000402874 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
intron-intron | ENST00000512607 | ENST00000506690 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
intron-intron | ENST00000512607 | ENST00000510187 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000504734 | CANX | chr5 | 179134191 | + | ENST00000376929 | SQSTM1 | chr5 | 179260032 | + | 2545 | 494 | 37 | 1062 | 341 |
ENST00000415618 | CANX | chr5 | 179134191 | + | ENST00000376929 | SQSTM1 | chr5 | 179260032 | + | 2535 | 484 | 27 | 1052 | 341 |
ENST00000452673 | CANX | chr5 | 179134191 | + | ENST00000376929 | SQSTM1 | chr5 | 179260032 | + | 2502 | 451 | 147 | 1019 | 290 |
ENST00000247461 | CANX | chr5 | 179134191 | + | ENST00000376929 | SQSTM1 | chr5 | 179260032 | + | 2555 | 504 | 200 | 1072 | 290 |
ENST00000504734 | CANX | chr5 | 179137066 | + | ENST00000376929 | SQSTM1 | chr5 | 179260032 | + | 2962 | 911 | 37 | 1479 | 480 |
ENST00000415618 | CANX | chr5 | 179137066 | + | ENST00000376929 | SQSTM1 | chr5 | 179260032 | + | 2952 | 901 | 27 | 1469 | 480 |
ENST00000452673 | CANX | chr5 | 179137066 | + | ENST00000376929 | SQSTM1 | chr5 | 179260032 | + | 2919 | 868 | 147 | 1436 | 429 |
ENST00000247461 | CANX | chr5 | 179137066 | + | ENST00000376929 | SQSTM1 | chr5 | 179260032 | + | 2972 | 921 | 200 | 1489 | 429 |
ENST00000512607 | CANX | chr5 | 179137066 | + | ENST00000376929 | SQSTM1 | chr5 | 179260032 | + | 2831 | 780 | 266 | 1348 | 360 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000504734 | ENST00000376929 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + | 0.00090803 | 0.999092 |
ENST00000415618 | ENST00000376929 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + | 0.000896272 | 0.9991037 |
ENST00000452673 | ENST00000376929 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + | 0.00160158 | 0.99839836 |
ENST00000247461 | ENST00000376929 | CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260032 | + | 0.001640805 | 0.99835914 |
ENST00000504734 | ENST00000376929 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + | 0.000710264 | 0.99928975 |
ENST00000415618 | ENST00000376929 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + | 0.00070041 | 0.9992995 |
ENST00000452673 | ENST00000376929 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + | 0.001359312 | 0.9986407 |
ENST00000247461 | ENST00000376929 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + | 0.001403378 | 0.9985966 |
ENST00000512607 | ENST00000376929 | CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260032 | + | 0.000941817 | 0.9990582 |
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Fusion Genomic Features for CANX-SQSTM1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260031 | + | 4.28E-05 | 0.9999572 |
CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260031 | + | 3.08E-06 | 0.9999969 |
CANX | chr5 | 179137066 | + | SQSTM1 | chr5 | 179260031 | + | 4.28E-05 | 0.9999572 |
CANX | chr5 | 179134191 | + | SQSTM1 | chr5 | 179260031 | + | 3.08E-06 | 0.9999969 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for CANX-SQSTM1 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr5:179134191/chr5:179260032) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
CANX | SQSTM1 |
FUNCTION: Calcium-binding protein that interacts with newly synthesized glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. | FUNCTION: Autophagy receptor required for selective macroautophagy (aggrephagy). Functions as a bridge between polyubiquitinated cargo and autophagosomes. Interacts directly with both the cargo to become degraded and an autophagy modifier of the MAP1 LC3 family (PubMed:16286508, PubMed:20168092, PubMed:24128730, PubMed:28404643, PubMed:22622177). Along with WDFY3, involved in the formation and autophagic degradation of cytoplasmic ubiquitin-containing inclusions (p62 bodies, ALIS/aggresome-like induced structures). Along with WDFY3, required to recruit ubiquitinated proteins to PML bodies in the nucleus (PubMed:24128730, PubMed:20168092). May regulate the activation of NFKB1 by TNF-alpha, nerve growth factor (NGF) and interleukin-1. May play a role in titin/TTN downstream signaling in muscle cells. May regulate signaling cascades through ubiquitination. Adapter that mediates the interaction between TRAF6 and CYLD (By similarity). May be involved in cell differentiation, apoptosis, immune response and regulation of K(+) channels. Involved in endosome organization by retaining vesicles in the perinuclear cloud: following ubiquitination by RNF26, attracts specific vesicle-associated adapters, forming a molecular bridge that restrains cognate vesicles in the perinuclear region and organizes the endosomal pathway for efficient cargo transport (PubMed:27368102). Promotes relocalization of 'Lys-63'-linked ubiquitinated STING1 to autophagosomes (PubMed:29496741). Acts as an activator of the NFE2L2/NRF2 pathway via interaction with KEAP1: interaction inactivates the BCR(KEAP1) complex, promoting nuclear accumulation of NFE2L2/NRF2 and subsequent expression of cytoprotective genes (PubMed:20452972, PubMed:28380357, PubMed:33393215). {ECO:0000250|UniProtKB:O08623, ECO:0000250|UniProtKB:Q64337, ECO:0000269|PubMed:10356400, ECO:0000269|PubMed:10747026, ECO:0000269|PubMed:11244088, ECO:0000269|PubMed:12471037, ECO:0000269|PubMed:15340068, ECO:0000269|PubMed:15802564, ECO:0000269|PubMed:15911346, ECO:0000269|PubMed:15953362, ECO:0000269|PubMed:16079148, ECO:0000269|PubMed:16286508, ECO:0000269|PubMed:19931284, ECO:0000269|PubMed:20168092, ECO:0000269|PubMed:20452972, ECO:0000269|PubMed:22622177, ECO:0000269|PubMed:24128730, ECO:0000269|PubMed:27368102, ECO:0000269|PubMed:28380357, ECO:0000269|PubMed:28404643, ECO:0000269|PubMed:29496741, ECO:0000269|PubMed:33393215}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 272_294 | 167 | 357.0 | Compositional bias | Note=Ser-rich | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 272_294 | 167 | 357.0 | Compositional bias | Note=Ser-rich | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 272_294 | 251 | 441.0 | Compositional bias | Note=Ser-rich | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 272_294 | 167 | 357.0 | Compositional bias | Note=Ser-rich | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 272_294 | 167 | 357.0 | Compositional bias | Note=Ser-rich | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 272_294 | 167 | 357.0 | Compositional bias | Note=Ser-rich | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 272_294 | 251 | 441.0 | Compositional bias | Note=Ser-rich | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 272_294 | 167 | 357.0 | Compositional bias | Note=Ser-rich | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 389_434 | 167 | 357.0 | Domain | UBA | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 389_434 | 167 | 357.0 | Domain | UBA | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 389_434 | 251 | 441.0 | Domain | UBA | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 389_434 | 167 | 357.0 | Domain | UBA | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 389_434 | 167 | 357.0 | Domain | UBA | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 389_434 | 167 | 357.0 | Domain | UBA | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 389_434 | 251 | 441.0 | Domain | UBA | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 389_434 | 167 | 357.0 | Domain | UBA | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 228_233 | 167 | 357.0 | Motif | Note=TRAF6-binding | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 336_341 | 167 | 357.0 | Motif | Note=LIR | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 228_233 | 167 | 357.0 | Motif | Note=TRAF6-binding | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 336_341 | 167 | 357.0 | Motif | Note=LIR | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 336_341 | 251 | 441.0 | Motif | Note=LIR | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 228_233 | 167 | 357.0 | Motif | Note=TRAF6-binding | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 336_341 | 167 | 357.0 | Motif | Note=LIR | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 228_233 | 167 | 357.0 | Motif | Note=TRAF6-binding | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 336_341 | 167 | 357.0 | Motif | Note=LIR | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 228_233 | 167 | 357.0 | Motif | Note=TRAF6-binding | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 336_341 | 167 | 357.0 | Motif | Note=LIR | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 336_341 | 251 | 441.0 | Motif | Note=LIR | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 228_233 | 167 | 357.0 | Motif | Note=TRAF6-binding | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 336_341 | 167 | 357.0 | Motif | Note=LIR | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 170_220 | 167 | 357.0 | Region | Note=LIM protein-binding (LB) | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 321_342 | 167 | 357.0 | Region | MAP1LC3B-binding | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 170_220 | 167 | 357.0 | Region | Note=LIM protein-binding (LB) | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 321_342 | 167 | 357.0 | Region | MAP1LC3B-binding | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 321_342 | 251 | 441.0 | Region | MAP1LC3B-binding | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 170_220 | 167 | 357.0 | Region | Note=LIM protein-binding (LB) | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 321_342 | 167 | 357.0 | Region | MAP1LC3B-binding | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 170_220 | 167 | 357.0 | Region | Note=LIM protein-binding (LB) | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 321_342 | 167 | 357.0 | Region | MAP1LC3B-binding | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 170_220 | 167 | 357.0 | Region | Note=LIM protein-binding (LB) | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 321_342 | 167 | 357.0 | Region | MAP1LC3B-binding | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 321_342 | 251 | 441.0 | Region | MAP1LC3B-binding | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 170_220 | 167 | 357.0 | Region | Note=LIM protein-binding (LB) | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 321_342 | 167 | 357.0 | Region | MAP1LC3B-binding |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 276_409 | 101 | 593.0 | Region | P domain (Extended arm) |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 278_345 | 101 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 348_405 | 101 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 276_409 | 101 | 593.0 | Region | P domain (Extended arm) |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 278_345 | 101 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 348_405 | 101 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 276_409 | 101 | 593.0 | Region | P domain (Extended arm) |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 278_345 | 101 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 348_405 | 101 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 276_409 | 240 | 593.0 | Region | P domain (Extended arm) |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 278_345 | 240 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 348_405 | 240 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 276_409 | 240 | 593.0 | Region | P domain (Extended arm) |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 278_345 | 240 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 348_405 | 240 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 276_409 | 240 | 593.0 | Region | P domain (Extended arm) |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 278_345 | 240 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 348_405 | 240 | 593.0 | Region | Note=4 X approximate repeats |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 278_290 | 101 | 593.0 | Repeat | Note=1-1 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 295_307 | 101 | 593.0 | Repeat | Note=1-2 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 314_326 | 101 | 593.0 | Repeat | Note=1-3 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 333_345 | 101 | 593.0 | Repeat | Note=1-4 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 348_358 | 101 | 593.0 | Repeat | Note=2-1 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 367_377 | 101 | 593.0 | Repeat | Note=2-2 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 381_391 | 101 | 593.0 | Repeat | Note=2-3 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 395_405 | 101 | 593.0 | Repeat | Note=2-4 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 278_290 | 101 | 593.0 | Repeat | Note=1-1 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 295_307 | 101 | 593.0 | Repeat | Note=1-2 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 314_326 | 101 | 593.0 | Repeat | Note=1-3 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 333_345 | 101 | 593.0 | Repeat | Note=1-4 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 348_358 | 101 | 593.0 | Repeat | Note=2-1 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 367_377 | 101 | 593.0 | Repeat | Note=2-2 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 381_391 | 101 | 593.0 | Repeat | Note=2-3 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 395_405 | 101 | 593.0 | Repeat | Note=2-4 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 278_290 | 101 | 593.0 | Repeat | Note=1-1 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 295_307 | 101 | 593.0 | Repeat | Note=1-2 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 314_326 | 101 | 593.0 | Repeat | Note=1-3 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 333_345 | 101 | 593.0 | Repeat | Note=1-4 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 348_358 | 101 | 593.0 | Repeat | Note=2-1 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 367_377 | 101 | 593.0 | Repeat | Note=2-2 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 381_391 | 101 | 593.0 | Repeat | Note=2-3 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 395_405 | 101 | 593.0 | Repeat | Note=2-4 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 278_290 | 240 | 593.0 | Repeat | Note=1-1 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 295_307 | 240 | 593.0 | Repeat | Note=1-2 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 314_326 | 240 | 593.0 | Repeat | Note=1-3 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 333_345 | 240 | 593.0 | Repeat | Note=1-4 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 348_358 | 240 | 593.0 | Repeat | Note=2-1 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 367_377 | 240 | 593.0 | Repeat | Note=2-2 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 381_391 | 240 | 593.0 | Repeat | Note=2-3 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 395_405 | 240 | 593.0 | Repeat | Note=2-4 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 278_290 | 240 | 593.0 | Repeat | Note=1-1 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 295_307 | 240 | 593.0 | Repeat | Note=1-2 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 314_326 | 240 | 593.0 | Repeat | Note=1-3 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 333_345 | 240 | 593.0 | Repeat | Note=1-4 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 348_358 | 240 | 593.0 | Repeat | Note=2-1 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 367_377 | 240 | 593.0 | Repeat | Note=2-2 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 381_391 | 240 | 593.0 | Repeat | Note=2-3 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 395_405 | 240 | 593.0 | Repeat | Note=2-4 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 278_290 | 240 | 593.0 | Repeat | Note=1-1 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 295_307 | 240 | 593.0 | Repeat | Note=1-2 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 314_326 | 240 | 593.0 | Repeat | Note=1-3 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 333_345 | 240 | 593.0 | Repeat | Note=1-4 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 348_358 | 240 | 593.0 | Repeat | Note=2-1 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 367_377 | 240 | 593.0 | Repeat | Note=2-2 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 381_391 | 240 | 593.0 | Repeat | Note=2-3 |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 395_405 | 240 | 593.0 | Repeat | Note=2-4 |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 21_481 | 101 | 593.0 | Topological domain | Lumenal |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 21_481 | 101 | 593.0 | Topological domain | Lumenal |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 21_481 | 101 | 593.0 | Topological domain | Lumenal |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 21_481 | 240 | 593.0 | Topological domain | Lumenal |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 21_481 | 240 | 593.0 | Topological domain | Lumenal |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 21_481 | 240 | 593.0 | Topological domain | Lumenal |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 482_502 | 101 | 593.0 | Transmembrane | Helical |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 482_502 | 101 | 593.0 | Transmembrane | Helical |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 482_502 | 101 | 593.0 | Transmembrane | Helical |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 482_502 | 240 | 593.0 | Transmembrane | Helical |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 482_502 | 240 | 593.0 | Transmembrane | Helical |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 482_502 | 240 | 593.0 | Transmembrane | Helical |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 3_102 | 167 | 357.0 | Domain | PB1 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 3_102 | 167 | 357.0 | Domain | PB1 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 3_102 | 251 | 441.0 | Domain | PB1 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 3_102 | 167 | 357.0 | Domain | PB1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 3_102 | 167 | 357.0 | Domain | PB1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 3_102 | 167 | 357.0 | Domain | PB1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 3_102 | 251 | 441.0 | Domain | PB1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 3_102 | 167 | 357.0 | Domain | PB1 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 228_233 | 251 | 441.0 | Motif | Note=TRAF6-binding | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 228_233 | 251 | 441.0 | Motif | Note=TRAF6-binding | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 170_220 | 251 | 441.0 | Region | Note=LIM protein-binding (LB) | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 170_220 | 251 | 441.0 | Region | Note=LIM protein-binding (LB) | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 122_167 | 167 | 357.0 | Zinc finger | ZZ-type | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 122_167 | 167 | 357.0 | Zinc finger | ZZ-type | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 122_167 | 251 | 441.0 | Zinc finger | ZZ-type | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 122_167 | 167 | 357.0 | Zinc finger | ZZ-type | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 122_167 | 167 | 357.0 | Zinc finger | ZZ-type | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 122_167 | 167 | 357.0 | Zinc finger | ZZ-type | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 122_167 | 251 | 441.0 | Zinc finger | ZZ-type | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 122_167 | 167 | 357.0 | Zinc finger | ZZ-type |
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Fusion Gene Sequence for CANX-SQSTM1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>12806_12806_1_CANX-SQSTM1_CANX_chr5_179134191_ENST00000247461_SQSTM1_chr5_179260032_ENST00000376929_length(transcript)=2555nt_BP=504nt ACTCAGGGGCCAGGGGCGGGCACAGGGCCGGGCTTCGTGCGGTGGGGCTCGCTCGCGCGGCAGCGGTGGCCGAGGCCTCTTGGTTCTGCG GCACGTGACGGTCGGGCCGCCTCCGCCTCTCTCTTTACTGCGGCGCGGGGCAAGGTGTGCGGGCGGGAAGGGGCACGGGCACCCCCGCGG TCCCCGGGAGGCTAGAGATCATGGAAGGGAAGTGGTTGCTGTGTATGTTACTGGTGCTTGGAACTGCTATTGTTGAGGCTCATGATGGAC ATGATGATGATGTGATTGATATTGAGGATGACCTTGACGATGTCATTGAAGAGGTAGAAGACTCAAAACCAGATACCACTGCTCCTCCTT CATCTCCCAAGGTTACTTACAAAGCTCCAGTTCCAACAGGGGAAGTATATTTTGCTGATTCTTTTGACAGAGGAACTCTGTCAGGGTGGA TTTTATCCAAAGCCAAGAAAGACGATACCGATGATGAAATTGCCAAATATGATGGCATTGAAGTTGATATCGATGTGGAGCACGGAGGGA AAAGAAGCCGCCTGACCCCCGTCTCTCCAGAGAGTTCCAGCACAGAGGAGAAGAGCAGCTCACAGCCAAGCAGCTGCTGCTCTGACCCCA GCAAGCCGGGTGGGAATGTTGAGGGCGCCACGCAGTCTCTGGCGGAGCAGATGAGGAAGATCGCCTTGGAGTCCGAGGGGCGCCCTGAGG AACAGATGGAGTCGGATAACTGTTCAGGAGGAGATGATGACTGGACCCATCTGTCTTCAAAAGAAGTGGACCCGTCTACAGGTGAACTCC AGTCCCTACAGATGCCAGAATCCGAAGGGCCAAGCTCTCTGGACCCCTCCCAGGAGGGACCCACAGGGCTGAAGGAAGCTGCCTTGTACC CACATCTCCCGCCAGAGGCTGACCCGCGGCTGATTGAGTCCCTCTCCCAGATGCTGTCCATGGGCTTCTCTGATGAAGGCGGCTGGCTCA CCAGGCTCCTGCAGACCAAGAACTATGACATCGGAGCGGCTCTGGACACCATCCAGTATTCAAAGCATCCCCCGCCGTTGTGACCACTTT TGCCCACCTCTTCTGCGTGCCCCTCTTCTGTCTCATAGTTGTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTG CCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGAAGCCATTTAGGGCAGCAAAACAAGTGACATGAAGGGAGGGTCCCTGTGTGTGTGTGT GCTGATGTTTCCTGGGTGCCCTGGCTCCTTGCAGCAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCCT GCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCTTTTGTTTTAAATGACTCATAGGTCCCTGACATT TAGTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCA GTGTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCAC CACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTTTTAAAATAAGATCTCTTTGTAGCCATCCTGTTAAATTTGTAAACAATCTAATT AAATGGCATCAGCACTTTAACCAATGACGTTTGCATAGAGAGAAATGATTGACAGTAAGTTTATTGTTAATGGTTCTTACAGAGTATCTT TAAAAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGT CTTCCCCAGTTATAAAGAGGTCACATAGTCGTGTGGGTCGAGGATTCTGTGCCTCCAGGACCAGGGGCCCACCCTCTGCCCAGGGAGTCC TTGCGTCCCATGAGGTCTTCCCGCAAGGCCTCTCAGACCCAGATGTGACGGGGTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCC TGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTGCTGGACCAGCTGGCCTGGGGTCCCTCTGAAGAGACC TTGGCTGCTCACTGTCCACATGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGG GACTCCATAGCTCCTTCCCAGGACCCCTCAGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTTTCA CCTTCCATGTCAGGCCAGCCTGTCCCTGAAAGAGAAGATGGCCATGCCCTCCATGTGTAAGAACAATGCCAGGGCCCAGGAGGACCGCCT GCCCTGCCTGGGCCTTGGCTGGGCCTCTGGTTCTGACACTTTCTGCTGGAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGC >12806_12806_1_CANX-SQSTM1_CANX_chr5_179134191_ENST00000247461_SQSTM1_chr5_179260032_ENST00000376929_length(amino acids)=290AA_BP=0 MEGKWLLCMLLVLGTAIVEAHDGHDDDVIDIEDDLDDVIEEVEDSKPDTTAPPSSPKVTYKAPVPTGEVYFADSFDRGTLSGWILSKAKK DDTDDEIAKYDGIEVDIDVEHGGKRSRLTPVSPESSSTEEKSSSQPSSCCSDPSKPGGNVEGATQSLAEQMRKIALESEGRPEEQMESDN CSGGDDDWTHLSSKEVDPSTGELQSLQMPESEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTK -------------------------------------------------------------- >12806_12806_2_CANX-SQSTM1_CANX_chr5_179134191_ENST00000415618_SQSTM1_chr5_179260032_ENST00000376929_length(transcript)=2535nt_BP=484nt AATCCGGCCAGGCGCTCGCGCTGGGTTCTGCTCACGCCCGTAGGGGCCCGCGTTCGCTGCAACGGGCCCTTCCTGATGGCCGATCGTCGG ACTCCTACCCCTTTTGCCGGCTGCCGTTTGCCCCGTCAGCGAAGGGCGCGCGATGCGTCCCAAGTCTCGGCTCCAGGAACCAGACGGATC ATGGAAGGGAAGTGGTTGCTGTGTATGTTACTGGTGCTTGGAACTGCTATTGTTGAGGCTCATGATGGACATGATGATGATGTGATTGAT ATTGAGGATGACCTTGACGATGTCATTGAAGAGGTAGAAGACTCAAAACCAGATACCACTGCTCCTCCTTCATCTCCCAAGGTTACTTAC AAAGCTCCAGTTCCAACAGGGGAAGTATATTTTGCTGATTCTTTTGACAGAGGAACTCTGTCAGGGTGGATTTTATCCAAAGCCAAGAAA GACGATACCGATGATGAAATTGCCAAATATGATGGCATTGAAGTTGATATCGATGTGGAGCACGGAGGGAAAAGAAGCCGCCTGACCCCC GTCTCTCCAGAGAGTTCCAGCACAGAGGAGAAGAGCAGCTCACAGCCAAGCAGCTGCTGCTCTGACCCCAGCAAGCCGGGTGGGAATGTT GAGGGCGCCACGCAGTCTCTGGCGGAGCAGATGAGGAAGATCGCCTTGGAGTCCGAGGGGCGCCCTGAGGAACAGATGGAGTCGGATAAC TGTTCAGGAGGAGATGATGACTGGACCCATCTGTCTTCAAAAGAAGTGGACCCGTCTACAGGTGAACTCCAGTCCCTACAGATGCCAGAA TCCGAAGGGCCAAGCTCTCTGGACCCCTCCCAGGAGGGACCCACAGGGCTGAAGGAAGCTGCCTTGTACCCACATCTCCCGCCAGAGGCT GACCCGCGGCTGATTGAGTCCCTCTCCCAGATGCTGTCCATGGGCTTCTCTGATGAAGGCGGCTGGCTCACCAGGCTCCTGCAGACCAAG AACTATGACATCGGAGCGGCTCTGGACACCATCCAGTATTCAAAGCATCCCCCGCCGTTGTGACCACTTTTGCCCACCTCTTCTGCGTGC CCCTCTTCTGTCTCATAGTTGTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGG TTAGGGTGCAAGAAGCCATTTAGGGCAGCAAAACAAGTGACATGAAGGGAGGGTCCCTGTGTGTGTGTGTGCTGATGTTTCCTGGGTGCC CTGGCTCCTTGCAGCAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCCTGCAGGGGCTACGTTAGCAGC CCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCTTTTGTTTTAAATGACTCATAGGTCCCTGACATTTAGTTGATTATTTTCTGCTA CAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCAGTGTTGTGGGCTTCCTGCTG GGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTC CAAACCATCAGCTGCTTTTAAAATAAGATCTCTTTGTAGCCATCCTGTTAAATTTGTAAACAATCTAATTAAATGGCATCAGCACTTTAA CCAATGACGTTTGCATAGAGAGAAATGATTGACAGTAAGTTTATTGTTAATGGTTCTTACAGAGTATCTTTAAAAGTGCCTTAGGGGAAC CCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTTCCCCAGTTATAAAGAGG TCACATAGTCGTGTGGGTCGAGGATTCTGTGCCTCCAGGACCAGGGGCCCACCCTCTGCCCAGGGAGTCCTTGCGTCCCATGAGGTCTTC CCGCAAGGCCTCTCAGACCCAGATGTGACGGGGTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTTGAG GCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTGCTGGACCAGCTGGCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACA TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCTTCCCA GGACCCCTCAGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTTTCACCTTCCATGTCAGGCCAGCC TGTCCCTGAAAGAGAAGATGGCCATGCCCTCCATGTGTAAGAACAATGCCAGGGCCCAGGAGGACCGCCTGCCCTGCCTGGGCCTTGGCT GGGCCTCTGGTTCTGACACTTTCTGCTGGAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAAATAAATGC >12806_12806_2_CANX-SQSTM1_CANX_chr5_179134191_ENST00000415618_SQSTM1_chr5_179260032_ENST00000376929_length(amino acids)=341AA_BP=1 MLTPVGARVRCNGPFLMADRRTPTPFAGCRLPRQRRARDASQVSAPGTRRIMEGKWLLCMLLVLGTAIVEAHDGHDDDVIDIEDDLDDVI EEVEDSKPDTTAPPSSPKVTYKAPVPTGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGIEVDIDVEHGGKRSRLTPVSPESSSTE EKSSSQPSSCCSDPSKPGGNVEGATQSLAEQMRKIALESEGRPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPESEGPSSLDP -------------------------------------------------------------- >12806_12806_3_CANX-SQSTM1_CANX_chr5_179134191_ENST00000452673_SQSTM1_chr5_179260032_ENST00000376929_length(transcript)=2502nt_BP=451nt ACTCAGGGGCCAGGGGCGGGCACAGGGCCGGGCTTCGTGCGGTGGGGCTCGCTCGCGCGGCAGCGGTGGCCGAGGCCTCTTGGTTCTGCG GCACGTGACGGTCGGGCCGCCTCCGCCTCTCTCTTTACTGCGGCGCGGGGCAAGATCATGGAAGGGAAGTGGTTGCTGTGTATGTTACTG GTGCTTGGAACTGCTATTGTTGAGGCTCATGATGGACATGATGATGATGTGATTGATATTGAGGATGACCTTGACGATGTCATTGAAGAG GTAGAAGACTCAAAACCAGATACCACTGCTCCTCCTTCATCTCCCAAGGTTACTTACAAAGCTCCAGTTCCAACAGGGGAAGTATATTTT GCTGATTCTTTTGACAGAGGAACTCTGTCAGGGTGGATTTTATCCAAAGCCAAGAAAGACGATACCGATGATGAAATTGCCAAATATGAT GGCATTGAAGTTGATATCGATGTGGAGCACGGAGGGAAAAGAAGCCGCCTGACCCCCGTCTCTCCAGAGAGTTCCAGCACAGAGGAGAAG AGCAGCTCACAGCCAAGCAGCTGCTGCTCTGACCCCAGCAAGCCGGGTGGGAATGTTGAGGGCGCCACGCAGTCTCTGGCGGAGCAGATG AGGAAGATCGCCTTGGAGTCCGAGGGGCGCCCTGAGGAACAGATGGAGTCGGATAACTGTTCAGGAGGAGATGATGACTGGACCCATCTG TCTTCAAAAGAAGTGGACCCGTCTACAGGTGAACTCCAGTCCCTACAGATGCCAGAATCCGAAGGGCCAAGCTCTCTGGACCCCTCCCAG GAGGGACCCACAGGGCTGAAGGAAGCTGCCTTGTACCCACATCTCCCGCCAGAGGCTGACCCGCGGCTGATTGAGTCCCTCTCCCAGATG CTGTCCATGGGCTTCTCTGATGAAGGCGGCTGGCTCACCAGGCTCCTGCAGACCAAGAACTATGACATCGGAGCGGCTCTGGACACCATC CAGTATTCAAAGCATCCCCCGCCGTTGTGACCACTTTTGCCCACCTCTTCTGCGTGCCCCTCTTCTGTCTCATAGTTGTGTTAAGCTTGC GTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGAAGCCATTTAGGGCAGCAAAA CAAGTGACATGAAGGGAGGGTCCCTGTGTGTGTGTGTGCTGATGTTTCCTGGGTGCCCTGGCTCCTTGCAGCAGGGCTGGGCCTGCGAGA CCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTT CTCTTTTGTTTTAAATGACTCATAGGTCCCTGACATTTAGTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTA AGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCAGTGTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAAT GTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTTTTAAAATAAGATCTCT TTGTAGCCATCCTGTTAAATTTGTAAACAATCTAATTAAATGGCATCAGCACTTTAACCAATGACGTTTGCATAGAGAGAAATGATTGAC AGTAAGTTTATTGTTAATGGTTCTTACAGAGTATCTTTAAAAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAAT AACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTTCCCCAGTTATAAAGAGGTCACATAGTCGTGTGGGTCGAGGATTCTGTGCC TCCAGGACCAGGGGCCCACCCTCTGCCCAGGGAGTCCTTGCGTCCCATGAGGTCTTCCCGCAAGGCCTCTCAGACCCAGATGTGACGGGG TGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGT GCTGGACCAGCTGGCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTGAACTTTTTCTAGGTGGCAGGACAAATTGC GCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCTTCCCAGGACCCCTCAGCTCCCCGGCACTGCAGTCTGCA GAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTTTCACCTTCCATGTCAGGCCAGCCTGTCCCTGAAAGAGAAGATGGCCATGCCCTCCA TGTGTAAGAACAATGCCAGGGCCCAGGAGGACCGCCTGCCCTGCCTGGGCCTTGGCTGGGCCTCTGGTTCTGACACTTTCTGCTGGAAGC >12806_12806_3_CANX-SQSTM1_CANX_chr5_179134191_ENST00000452673_SQSTM1_chr5_179260032_ENST00000376929_length(amino acids)=290AA_BP=0 MEGKWLLCMLLVLGTAIVEAHDGHDDDVIDIEDDLDDVIEEVEDSKPDTTAPPSSPKVTYKAPVPTGEVYFADSFDRGTLSGWILSKAKK DDTDDEIAKYDGIEVDIDVEHGGKRSRLTPVSPESSSTEEKSSSQPSSCCSDPSKPGGNVEGATQSLAEQMRKIALESEGRPEEQMESDN CSGGDDDWTHLSSKEVDPSTGELQSLQMPESEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTK -------------------------------------------------------------- >12806_12806_4_CANX-SQSTM1_CANX_chr5_179134191_ENST00000504734_SQSTM1_chr5_179260032_ENST00000376929_length(transcript)=2545nt_BP=494nt AGTGCACGCCAATCCGGCCAGGCGCTCGCGCTGGGTTCTGCTCACGCCCGTAGGGGCCCGCGTTCGCTGCAACGGGCCCTTCCTGATGGC CGATCGTCGGACTCCTACCCCTTTTGCCGGCTGCCGTTTGCCCCGTCAGCGAAGGGCGCGCGATGCGTCCCAAGTCTCGGCTCCAGGAAC CAGACGGATCATGGAAGGGAAGTGGTTGCTGTGTATGTTACTGGTGCTTGGAACTGCTATTGTTGAGGCTCATGATGGACATGATGATGA TGTGATTGATATTGAGGATGACCTTGACGATGTCATTGAAGAGGTAGAAGACTCAAAACCAGATACCACTGCTCCTCCTTCATCTCCCAA GGTTACTTACAAAGCTCCAGTTCCAACAGGGGAAGTATATTTTGCTGATTCTTTTGACAGAGGAACTCTGTCAGGGTGGATTTTATCCAA AGCCAAGAAAGACGATACCGATGATGAAATTGCCAAATATGATGGCATTGAAGTTGATATCGATGTGGAGCACGGAGGGAAAAGAAGCCG CCTGACCCCCGTCTCTCCAGAGAGTTCCAGCACAGAGGAGAAGAGCAGCTCACAGCCAAGCAGCTGCTGCTCTGACCCCAGCAAGCCGGG TGGGAATGTTGAGGGCGCCACGCAGTCTCTGGCGGAGCAGATGAGGAAGATCGCCTTGGAGTCCGAGGGGCGCCCTGAGGAACAGATGGA GTCGGATAACTGTTCAGGAGGAGATGATGACTGGACCCATCTGTCTTCAAAAGAAGTGGACCCGTCTACAGGTGAACTCCAGTCCCTACA GATGCCAGAATCCGAAGGGCCAAGCTCTCTGGACCCCTCCCAGGAGGGACCCACAGGGCTGAAGGAAGCTGCCTTGTACCCACATCTCCC GCCAGAGGCTGACCCGCGGCTGATTGAGTCCCTCTCCCAGATGCTGTCCATGGGCTTCTCTGATGAAGGCGGCTGGCTCACCAGGCTCCT GCAGACCAAGAACTATGACATCGGAGCGGCTCTGGACACCATCCAGTATTCAAAGCATCCCCCGCCGTTGTGACCACTTTTGCCCACCTC TTCTGCGTGCCCCTCTTCTGTCTCATAGTTGTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCA GGATCAGGGGTTAGGGTGCAAGAAGCCATTTAGGGCAGCAAAACAAGTGACATGAAGGGAGGGTCCCTGTGTGTGTGTGTGCTGATGTTT CCTGGGTGCCCTGGCTCCTTGCAGCAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCCTGCAGGGGCTA CGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCTTTTGTTTTAAATGACTCATAGGTCCCTGACATTTAGTTGATTA TTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCAGTGTTGTGGG CTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTT CTCTCATTTCCAAACCATCAGCTGCTTTTAAAATAAGATCTCTTTGTAGCCATCCTGTTAAATTTGTAAACAATCTAATTAAATGGCATC AGCACTTTAACCAATGACGTTTGCATAGAGAGAAATGATTGACAGTAAGTTTATTGTTAATGGTTCTTACAGAGTATCTTTAAAAGTGCC TTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTTCCCCAGT TATAAAGAGGTCACATAGTCGTGTGGGTCGAGGATTCTGTGCCTCCAGGACCAGGGGCCCACCCTCTGCCCAGGGAGTCCTTGCGTCCCA TGAGGTCTTCCCGCAAGGCCTCTCAGACCCAGATGTGACGGGGTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCC TTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTGCTGGACCAGCTGGCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTC ACTGTCCACATGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAG CTCCTTCCCAGGACCCCTCAGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTTTCACCTTCCATGT CAGGCCAGCCTGTCCCTGAAAGAGAAGATGGCCATGCCCTCCATGTGTAAGAACAATGCCAGGGCCCAGGAGGACCGCCTGCCCTGCCTG GGCCTTGGCTGGGCCTCTGGTTCTGACACTTTCTGCTGGAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGC >12806_12806_4_CANX-SQSTM1_CANX_chr5_179134191_ENST00000504734_SQSTM1_chr5_179260032_ENST00000376929_length(amino acids)=341AA_BP=1 MLTPVGARVRCNGPFLMADRRTPTPFAGCRLPRQRRARDASQVSAPGTRRIMEGKWLLCMLLVLGTAIVEAHDGHDDDVIDIEDDLDDVI EEVEDSKPDTTAPPSSPKVTYKAPVPTGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGIEVDIDVEHGGKRSRLTPVSPESSSTE EKSSSQPSSCCSDPSKPGGNVEGATQSLAEQMRKIALESEGRPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPESEGPSSLDP -------------------------------------------------------------- >12806_12806_5_CANX-SQSTM1_CANX_chr5_179137066_ENST00000247461_SQSTM1_chr5_179260032_ENST00000376929_length(transcript)=2972nt_BP=921nt ACTCAGGGGCCAGGGGCGGGCACAGGGCCGGGCTTCGTGCGGTGGGGCTCGCTCGCGCGGCAGCGGTGGCCGAGGCCTCTTGGTTCTGCG GCACGTGACGGTCGGGCCGCCTCCGCCTCTCTCTTTACTGCGGCGCGGGGCAAGGTGTGCGGGCGGGAAGGGGCACGGGCACCCCCGCGG TCCCCGGGAGGCTAGAGATCATGGAAGGGAAGTGGTTGCTGTGTATGTTACTGGTGCTTGGAACTGCTATTGTTGAGGCTCATGATGGAC ATGATGATGATGTGATTGATATTGAGGATGACCTTGACGATGTCATTGAAGAGGTAGAAGACTCAAAACCAGATACCACTGCTCCTCCTT CATCTCCCAAGGTTACTTACAAAGCTCCAGTTCCAACAGGGGAAGTATATTTTGCTGATTCTTTTGACAGAGGAACTCTGTCAGGGTGGA TTTTATCCAAAGCCAAGAAAGACGATACCGATGATGAAATTGCCAAATATGATGGAAAGTGGGAGGTAGAGGAAATGAAGGAGTCAAAGC TTCCAGGTGATAAAGGACTTGTGTTGATGTCTCGGGCCAAGCATCATGCCATCTCTGCTAAACTGAACAAGCCCTTCCTGTTTGACACCA AGCCTCTCATTGTTCAGTATGAGGTTAATTTCCAAAATGGAATAGAATGTGGTGGTGCCTATGTGAAACTGCTTTCTAAAACACCAGAAC TCAACCTGGATCAGTTCCATGACAAGACCCCTTATACGATTATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCT TCCGACACAAAAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGA AAACACATCTTTACACACTAAGCATTGAAGTTGATATCGATGTGGAGCACGGAGGGAAAAGAAGCCGCCTGACCCCCGTCTCTCCAGAGA GTTCCAGCACAGAGGAGAAGAGCAGCTCACAGCCAAGCAGCTGCTGCTCTGACCCCAGCAAGCCGGGTGGGAATGTTGAGGGCGCCACGC AGTCTCTGGCGGAGCAGATGAGGAAGATCGCCTTGGAGTCCGAGGGGCGCCCTGAGGAACAGATGGAGTCGGATAACTGTTCAGGAGGAG ATGATGACTGGACCCATCTGTCTTCAAAAGAAGTGGACCCGTCTACAGGTGAACTCCAGTCCCTACAGATGCCAGAATCCGAAGGGCCAA GCTCTCTGGACCCCTCCCAGGAGGGACCCACAGGGCTGAAGGAAGCTGCCTTGTACCCACATCTCCCGCCAGAGGCTGACCCGCGGCTGA TTGAGTCCCTCTCCCAGATGCTGTCCATGGGCTTCTCTGATGAAGGCGGCTGGCTCACCAGGCTCCTGCAGACCAAGAACTATGACATCG GAGCGGCTCTGGACACCATCCAGTATTCAAAGCATCCCCCGCCGTTGTGACCACTTTTGCCCACCTCTTCTGCGTGCCCCTCTTCTGTCT CATAGTTGTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGA AGCCATTTAGGGCAGCAAAACAAGTGACATGAAGGGAGGGTCCCTGTGTGTGTGTGTGCTGATGTTTCCTGGGTGCCCTGGCTCCTTGCA GCAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCT TGCCTAATGGCTTTCACTTTCTCTTTTGTTTTAAATGACTCATAGGTCCCTGACATTTAGTTGATTATTTTCTGCTACAGACCTGGTACA CTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCAGTGTTGTGGGCTTCCTGCTGGGACTGAGAAGGC TCACGAAGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCT GCTTTTAAAATAAGATCTCTTTGTAGCCATCCTGTTAAATTTGTAAACAATCTAATTAAATGGCATCAGCACTTTAACCAATGACGTTTG CATAGAGAGAAATGATTGACAGTAAGTTTATTGTTAATGGTTCTTACAGAGTATCTTTAAAAGTGCCTTAGGGGAACCCTGTCCCTCCTA ACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTTCCCCAGTTATAAAGAGGTCACATAGTCGTG TGGGTCGAGGATTCTGTGCCTCCAGGACCAGGGGCCCACCCTCTGCCCAGGGAGTCCTTGCGTCCCATGAGGTCTTCCCGCAAGGCCTCT CAGACCCAGATGTGACGGGGTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGG GGGTCCCTTGCTTAGCCTGTGCTGGACCAGCTGGCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTGAACTTTTTC TAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCTTCCCAGGACCCCTCAGCT CCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTTTCACCTTCCATGTCAGGCCAGCCTGTCCCTGAAAGA GAAGATGGCCATGCCCTCCATGTGTAAGAACAATGCCAGGGCCCAGGAGGACCGCCTGCCCTGCCTGGGCCTTGGCTGGGCCTCTGGTTC TGACACTTTCTGCTGGAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACC >12806_12806_5_CANX-SQSTM1_CANX_chr5_179137066_ENST00000247461_SQSTM1_chr5_179260032_ENST00000376929_length(amino acids)=429AA_BP=0 MEGKWLLCMLLVLGTAIVEAHDGHDDDVIDIEDDLDDVIEEVEDSKPDTTAPPSSPKVTYKAPVPTGEVYFADSFDRGTLSGWILSKAKK DDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFH DKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLSIEVDIDVEHGGKRSRLTPVSPESSSTEEK SSSQPSSCCSDPSKPGGNVEGATQSLAEQMRKIALESEGRPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPESEGPSSLDPSQ -------------------------------------------------------------- >12806_12806_6_CANX-SQSTM1_CANX_chr5_179137066_ENST00000415618_SQSTM1_chr5_179260032_ENST00000376929_length(transcript)=2952nt_BP=901nt AATCCGGCCAGGCGCTCGCGCTGGGTTCTGCTCACGCCCGTAGGGGCCCGCGTTCGCTGCAACGGGCCCTTCCTGATGGCCGATCGTCGG ACTCCTACCCCTTTTGCCGGCTGCCGTTTGCCCCGTCAGCGAAGGGCGCGCGATGCGTCCCAAGTCTCGGCTCCAGGAACCAGACGGATC ATGGAAGGGAAGTGGTTGCTGTGTATGTTACTGGTGCTTGGAACTGCTATTGTTGAGGCTCATGATGGACATGATGATGATGTGATTGAT ATTGAGGATGACCTTGACGATGTCATTGAAGAGGTAGAAGACTCAAAACCAGATACCACTGCTCCTCCTTCATCTCCCAAGGTTACTTAC AAAGCTCCAGTTCCAACAGGGGAAGTATATTTTGCTGATTCTTTTGACAGAGGAACTCTGTCAGGGTGGATTTTATCCAAAGCCAAGAAA GACGATACCGATGATGAAATTGCCAAATATGATGGAAAGTGGGAGGTAGAGGAAATGAAGGAGTCAAAGCTTCCAGGTGATAAAGGACTT GTGTTGATGTCTCGGGCCAAGCATCATGCCATCTCTGCTAAACTGAACAAGCCCTTCCTGTTTGACACCAAGCCTCTCATTGTTCAGTAT GAGGTTAATTTCCAAAATGGAATAGAATGTGGTGGTGCCTATGTGAAACTGCTTTCTAAAACACCAGAACTCAACCTGGATCAGTTCCAT GACAAGACCCCTTATACGATTATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAA ACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAACACATCTTTACACACTA AGCATTGAAGTTGATATCGATGTGGAGCACGGAGGGAAAAGAAGCCGCCTGACCCCCGTCTCTCCAGAGAGTTCCAGCACAGAGGAGAAG AGCAGCTCACAGCCAAGCAGCTGCTGCTCTGACCCCAGCAAGCCGGGTGGGAATGTTGAGGGCGCCACGCAGTCTCTGGCGGAGCAGATG AGGAAGATCGCCTTGGAGTCCGAGGGGCGCCCTGAGGAACAGATGGAGTCGGATAACTGTTCAGGAGGAGATGATGACTGGACCCATCTG TCTTCAAAAGAAGTGGACCCGTCTACAGGTGAACTCCAGTCCCTACAGATGCCAGAATCCGAAGGGCCAAGCTCTCTGGACCCCTCCCAG GAGGGACCCACAGGGCTGAAGGAAGCTGCCTTGTACCCACATCTCCCGCCAGAGGCTGACCCGCGGCTGATTGAGTCCCTCTCCCAGATG CTGTCCATGGGCTTCTCTGATGAAGGCGGCTGGCTCACCAGGCTCCTGCAGACCAAGAACTATGACATCGGAGCGGCTCTGGACACCATC CAGTATTCAAAGCATCCCCCGCCGTTGTGACCACTTTTGCCCACCTCTTCTGCGTGCCCCTCTTCTGTCTCATAGTTGTGTTAAGCTTGC GTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGAAGCCATTTAGGGCAGCAAAA CAAGTGACATGAAGGGAGGGTCCCTGTGTGTGTGTGTGCTGATGTTTCCTGGGTGCCCTGGCTCCTTGCAGCAGGGCTGGGCCTGCGAGA CCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTT CTCTTTTGTTTTAAATGACTCATAGGTCCCTGACATTTAGTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTA AGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCAGTGTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAAT GTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTTTTAAAATAAGATCTCT TTGTAGCCATCCTGTTAAATTTGTAAACAATCTAATTAAATGGCATCAGCACTTTAACCAATGACGTTTGCATAGAGAGAAATGATTGAC AGTAAGTTTATTGTTAATGGTTCTTACAGAGTATCTTTAAAAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAAT AACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTTCCCCAGTTATAAAGAGGTCACATAGTCGTGTGGGTCGAGGATTCTGTGCC TCCAGGACCAGGGGCCCACCCTCTGCCCAGGGAGTCCTTGCGTCCCATGAGGTCTTCCCGCAAGGCCTCTCAGACCCAGATGTGACGGGG TGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGT GCTGGACCAGCTGGCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTGAACTTTTTCTAGGTGGCAGGACAAATTGC GCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCTTCCCAGGACCCCTCAGCTCCCCGGCACTGCAGTCTGCA GAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTTTCACCTTCCATGTCAGGCCAGCCTGTCCCTGAAAGAGAAGATGGCCATGCCCTCCA TGTGTAAGAACAATGCCAGGGCCCAGGAGGACCGCCTGCCCTGCCTGGGCCTTGGCTGGGCCTCTGGTTCTGACACTTTCTGCTGGAAGC >12806_12806_6_CANX-SQSTM1_CANX_chr5_179137066_ENST00000415618_SQSTM1_chr5_179260032_ENST00000376929_length(amino acids)=480AA_BP=1 MLTPVGARVRCNGPFLMADRRTPTPFAGCRLPRQRRARDASQVSAPGTRRIMEGKWLLCMLLVLGTAIVEAHDGHDDDVIDIEDDLDDVI EEVEDSKPDTTAPPSSPKVTYKAPVPTGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHH AISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHA KRPDADLKTYFTDKKTHLYTLSIEVDIDVEHGGKRSRLTPVSPESSSTEEKSSSQPSSCCSDPSKPGGNVEGATQSLAEQMRKIALESEG RPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPESEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEG -------------------------------------------------------------- >12806_12806_7_CANX-SQSTM1_CANX_chr5_179137066_ENST00000452673_SQSTM1_chr5_179260032_ENST00000376929_length(transcript)=2919nt_BP=868nt ACTCAGGGGCCAGGGGCGGGCACAGGGCCGGGCTTCGTGCGGTGGGGCTCGCTCGCGCGGCAGCGGTGGCCGAGGCCTCTTGGTTCTGCG GCACGTGACGGTCGGGCCGCCTCCGCCTCTCTCTTTACTGCGGCGCGGGGCAAGATCATGGAAGGGAAGTGGTTGCTGTGTATGTTACTG GTGCTTGGAACTGCTATTGTTGAGGCTCATGATGGACATGATGATGATGTGATTGATATTGAGGATGACCTTGACGATGTCATTGAAGAG GTAGAAGACTCAAAACCAGATACCACTGCTCCTCCTTCATCTCCCAAGGTTACTTACAAAGCTCCAGTTCCAACAGGGGAAGTATATTTT GCTGATTCTTTTGACAGAGGAACTCTGTCAGGGTGGATTTTATCCAAAGCCAAGAAAGACGATACCGATGATGAAATTGCCAAATATGAT GGAAAGTGGGAGGTAGAGGAAATGAAGGAGTCAAAGCTTCCAGGTGATAAAGGACTTGTGTTGATGTCTCGGGCCAAGCATCATGCCATC TCTGCTAAACTGAACAAGCCCTTCCTGTTTGACACCAAGCCTCTCATTGTTCAGTATGAGGTTAATTTCCAAAATGGAATAGAATGTGGT GGTGCCTATGTGAAACTGCTTTCTAAAACACCAGAACTCAACCTGGATCAGTTCCATGACAAGACCCCTTATACGATTATGTTTGGTCCA GATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGAGG CCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAACACATCTTTACACACTAAGCATTGAAGTTGATATCGATGTGGAGCACGGA GGGAAAAGAAGCCGCCTGACCCCCGTCTCTCCAGAGAGTTCCAGCACAGAGGAGAAGAGCAGCTCACAGCCAAGCAGCTGCTGCTCTGAC CCCAGCAAGCCGGGTGGGAATGTTGAGGGCGCCACGCAGTCTCTGGCGGAGCAGATGAGGAAGATCGCCTTGGAGTCCGAGGGGCGCCCT GAGGAACAGATGGAGTCGGATAACTGTTCAGGAGGAGATGATGACTGGACCCATCTGTCTTCAAAAGAAGTGGACCCGTCTACAGGTGAA CTCCAGTCCCTACAGATGCCAGAATCCGAAGGGCCAAGCTCTCTGGACCCCTCCCAGGAGGGACCCACAGGGCTGAAGGAAGCTGCCTTG TACCCACATCTCCCGCCAGAGGCTGACCCGCGGCTGATTGAGTCCCTCTCCCAGATGCTGTCCATGGGCTTCTCTGATGAAGGCGGCTGG CTCACCAGGCTCCTGCAGACCAAGAACTATGACATCGGAGCGGCTCTGGACACCATCCAGTATTCAAAGCATCCCCCGCCGTTGTGACCA CTTTTGCCCACCTCTTCTGCGTGCCCCTCTTCTGTCTCATAGTTGTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTC TCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGAAGCCATTTAGGGCAGCAAAACAAGTGACATGAAGGGAGGGTCCCTGTGTGTGT GTGTGCTGATGTTTCCTGGGTGCCCTGGCTCCTTGCAGCAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCT CCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCTTTTGTTTTAAATGACTCATAGGTCCCTGA CATTTAGTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAG GCCAGTGTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCT TCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTTTTAAAATAAGATCTCTTTGTAGCCATCCTGTTAAATTTGTAAACAATCT AATTAAATGGCATCAGCACTTTAACCAATGACGTTTGCATAGAGAGAAATGATTGACAGTAAGTTTATTGTTAATGGTTCTTACAGAGTA TCTTTAAAAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCG AAGTCTTCCCCAGTTATAAAGAGGTCACATAGTCGTGTGGGTCGAGGATTCTGTGCCTCCAGGACCAGGGGCCCACCCTCTGCCCAGGGA GTCCTTGCGTCCCATGAGGTCTTCCCGCAAGGCCTCTCAGACCCAGATGTGACGGGGTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTG GGCCTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTGCTGGACCAGCTGGCCTGGGGTCCCTCTGAAGA GACCTTGGCTGCTCACTGTCCACATGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGG ATGGGACTCCATAGCTCCTTCCCAGGACCCCTCAGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGT TTCACCTTCCATGTCAGGCCAGCCTGTCCCTGAAAGAGAAGATGGCCATGCCCTCCATGTGTAAGAACAATGCCAGGGCCCAGGAGGACC GCCTGCCCTGCCTGGGCCTTGGCTGGGCCTCTGGTTCTGACACTTTCTGCTGGAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGT >12806_12806_7_CANX-SQSTM1_CANX_chr5_179137066_ENST00000452673_SQSTM1_chr5_179260032_ENST00000376929_length(amino acids)=429AA_BP=0 MEGKWLLCMLLVLGTAIVEAHDGHDDDVIDIEDDLDDVIEEVEDSKPDTTAPPSSPKVTYKAPVPTGEVYFADSFDRGTLSGWILSKAKK DDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFH DKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLSIEVDIDVEHGGKRSRLTPVSPESSSTEEK SSSQPSSCCSDPSKPGGNVEGATQSLAEQMRKIALESEGRPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPESEGPSSLDPSQ -------------------------------------------------------------- >12806_12806_8_CANX-SQSTM1_CANX_chr5_179137066_ENST00000504734_SQSTM1_chr5_179260032_ENST00000376929_length(transcript)=2962nt_BP=911nt AGTGCACGCCAATCCGGCCAGGCGCTCGCGCTGGGTTCTGCTCACGCCCGTAGGGGCCCGCGTTCGCTGCAACGGGCCCTTCCTGATGGC CGATCGTCGGACTCCTACCCCTTTTGCCGGCTGCCGTTTGCCCCGTCAGCGAAGGGCGCGCGATGCGTCCCAAGTCTCGGCTCCAGGAAC CAGACGGATCATGGAAGGGAAGTGGTTGCTGTGTATGTTACTGGTGCTTGGAACTGCTATTGTTGAGGCTCATGATGGACATGATGATGA TGTGATTGATATTGAGGATGACCTTGACGATGTCATTGAAGAGGTAGAAGACTCAAAACCAGATACCACTGCTCCTCCTTCATCTCCCAA GGTTACTTACAAAGCTCCAGTTCCAACAGGGGAAGTATATTTTGCTGATTCTTTTGACAGAGGAACTCTGTCAGGGTGGATTTTATCCAA AGCCAAGAAAGACGATACCGATGATGAAATTGCCAAATATGATGGAAAGTGGGAGGTAGAGGAAATGAAGGAGTCAAAGCTTCCAGGTGA TAAAGGACTTGTGTTGATGTCTCGGGCCAAGCATCATGCCATCTCTGCTAAACTGAACAAGCCCTTCCTGTTTGACACCAAGCCTCTCAT TGTTCAGTATGAGGTTAATTTCCAAAATGGAATAGAATGTGGTGGTGCCTATGTGAAACTGCTTTCTAAAACACCAGAACTCAACCTGGA TCAGTTCCATGACAAGACCCCTTATACGATTATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAA AAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAACACATCT TTACACACTAAGCATTGAAGTTGATATCGATGTGGAGCACGGAGGGAAAAGAAGCCGCCTGACCCCCGTCTCTCCAGAGAGTTCCAGCAC AGAGGAGAAGAGCAGCTCACAGCCAAGCAGCTGCTGCTCTGACCCCAGCAAGCCGGGTGGGAATGTTGAGGGCGCCACGCAGTCTCTGGC GGAGCAGATGAGGAAGATCGCCTTGGAGTCCGAGGGGCGCCCTGAGGAACAGATGGAGTCGGATAACTGTTCAGGAGGAGATGATGACTG GACCCATCTGTCTTCAAAAGAAGTGGACCCGTCTACAGGTGAACTCCAGTCCCTACAGATGCCAGAATCCGAAGGGCCAAGCTCTCTGGA CCCCTCCCAGGAGGGACCCACAGGGCTGAAGGAAGCTGCCTTGTACCCACATCTCCCGCCAGAGGCTGACCCGCGGCTGATTGAGTCCCT CTCCCAGATGCTGTCCATGGGCTTCTCTGATGAAGGCGGCTGGCTCACCAGGCTCCTGCAGACCAAGAACTATGACATCGGAGCGGCTCT GGACACCATCCAGTATTCAAAGCATCCCCCGCCGTTGTGACCACTTTTGCCCACCTCTTCTGCGTGCCCCTCTTCTGTCTCATAGTTGTG TTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGAAGCCATTTAG GGCAGCAAAACAAGTGACATGAAGGGAGGGTCCCTGTGTGTGTGTGTGCTGATGTTTCCTGGGTGCCCTGGCTCCTTGCAGCAGGGCTGG GCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGG CTTTCACTTTCTCTTTTGTTTTAAATGACTCATAGGTCCCTGACATTTAGTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTT AGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCAGTGTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGG CATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTTTTAAAA TAAGATCTCTTTGTAGCCATCCTGTTAAATTTGTAAACAATCTAATTAAATGGCATCAGCACTTTAACCAATGACGTTTGCATAGAGAGA AATGATTGACAGTAAGTTTATTGTTAATGGTTCTTACAGAGTATCTTTAAAAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTAT CTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTTCCCCAGTTATAAAGAGGTCACATAGTCGTGTGGGTCGAGG ATTCTGTGCCTCCAGGACCAGGGGCCCACCCTCTGCCCAGGGAGTCCTTGCGTCCCATGAGGTCTTCCCGCAAGGCCTCTCAGACCCAGA TGTGACGGGGTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTG CTTAGCCTGTGCTGGACCAGCTGGCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTGAACTTTTTCTAGGTGGCAG GACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCTTCCCAGGACCCCTCAGCTCCCCGGCACT GCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTTTCACCTTCCATGTCAGGCCAGCCTGTCCCTGAAAGAGAAGATGGCC ATGCCCTCCATGTGTAAGAACAATGCCAGGGCCCAGGAGGACCGCCTGCCCTGCCTGGGCCTTGGCTGGGCCTCTGGTTCTGACACTTTC >12806_12806_8_CANX-SQSTM1_CANX_chr5_179137066_ENST00000504734_SQSTM1_chr5_179260032_ENST00000376929_length(amino acids)=480AA_BP=1 MLTPVGARVRCNGPFLMADRRTPTPFAGCRLPRQRRARDASQVSAPGTRRIMEGKWLLCMLLVLGTAIVEAHDGHDDDVIDIEDDLDDVI EEVEDSKPDTTAPPSSPKVTYKAPVPTGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHH AISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHA KRPDADLKTYFTDKKTHLYTLSIEVDIDVEHGGKRSRLTPVSPESSSTEEKSSSQPSSCCSDPSKPGGNVEGATQSLAEQMRKIALESEG RPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPESEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEG -------------------------------------------------------------- >12806_12806_9_CANX-SQSTM1_CANX_chr5_179137066_ENST00000512607_SQSTM1_chr5_179260032_ENST00000376929_length(transcript)=2831nt_BP=780nt GTTCTGCGGCACGTGACGGTCGGGCCGCCTCCGCCTCTCTCTTTACTGCGGCGCGGGGCAAGGTGTGCGGGCGGGAAGGGGCACGGGCAC CCCCGCGGTCCCCGGGAGGCTAGAGATCATGGAAGGGAAGTGGTTGCTGTGTATGTTACTGGTGCTTGGAACTGCTATTGTTGAGGCTCA TGATGGACATGATGATGATGTGATTGATATTGAGGATGACCTTGACGATGTCATTGAAGAGGTAGAAGACTCAAAACCAGATACCACTGC TCCTCCTTCATCTCCCAAGGTTACTTACAAAGCTCCAGTTCCAACAGGGGAAGTATATTTTGCTGATTCTTTTGACAGAGGAACTCTGTC AGGGAAAGTGGGAGGTAGAGGAAATGAAGGAGTCAAAGCTTCCAGGTGATAAAGGACTTGTGTTGATGTCTCGGGCCAAGCATCATGCCA TCTCTGCTAAACTGAACAAGCCCTTCCTGTTTGACACCAAGCCTCTCATTGTTCAGTATGAGGTTAATTTCCAAAATGGAATAGAATGTG GTGGTGCCTATGTGAAACTGCTTTCTAAAACACCAGAACTCAACCTGGATCAGTTCCATGACAAGACCCCTTATACGATTATGTTTGGTC CAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGA GGCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAACACATCTTTACACACTAAGCATTGAAGTTGATATCGATGTGGAGCACG GAGGGAAAAGAAGCCGCCTGACCCCCGTCTCTCCAGAGAGTTCCAGCACAGAGGAGAAGAGCAGCTCACAGCCAAGCAGCTGCTGCTCTG ACCCCAGCAAGCCGGGTGGGAATGTTGAGGGCGCCACGCAGTCTCTGGCGGAGCAGATGAGGAAGATCGCCTTGGAGTCCGAGGGGCGCC CTGAGGAACAGATGGAGTCGGATAACTGTTCAGGAGGAGATGATGACTGGACCCATCTGTCTTCAAAAGAAGTGGACCCGTCTACAGGTG AACTCCAGTCCCTACAGATGCCAGAATCCGAAGGGCCAAGCTCTCTGGACCCCTCCCAGGAGGGACCCACAGGGCTGAAGGAAGCTGCCT TGTACCCACATCTCCCGCCAGAGGCTGACCCGCGGCTGATTGAGTCCCTCTCCCAGATGCTGTCCATGGGCTTCTCTGATGAAGGCGGCT GGCTCACCAGGCTCCTGCAGACCAAGAACTATGACATCGGAGCGGCTCTGGACACCATCCAGTATTCAAAGCATCCCCCGCCGTTGTGAC CACTTTTGCCCACCTCTTCTGCGTGCCCCTCTTCTGTCTCATAGTTGTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTT TCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGAAGCCATTTAGGGCAGCAAAACAAGTGACATGAAGGGAGGGTCCCTGTGTGT GTGTGTGCTGATGTTTCCTGGGTGCCCTGGCTCCTTGCAGCAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCC CTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCTTTTGTTTTAAATGACTCATAGGTCCCT GACATTTAGTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGG AGGCCAGTGTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCT CTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTTTTAAAATAAGATCTCTTTGTAGCCATCCTGTTAAATTTGTAAACAAT CTAATTAAATGGCATCAGCACTTTAACCAATGACGTTTGCATAGAGAGAAATGATTGACAGTAAGTTTATTGTTAATGGTTCTTACAGAG TATCTTTAAAAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCAT CGAAGTCTTCCCCAGTTATAAAGAGGTCACATAGTCGTGTGGGTCGAGGATTCTGTGCCTCCAGGACCAGGGGCCCACCCTCTGCCCAGG GAGTCCTTGCGTCCCATGAGGTCTTCCCGCAAGGCCTCTCAGACCCAGATGTGACGGGGTGTGTGGCCCGAGGAAGCTGGACAGCGGCAG TGGGCCTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTGCTGGACCAGCTGGCCTGGGGTCCCTCTGAA GAGACCTTGGCTGCTCACTGTCCACATGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCTGCT GGATGGGACTCCATAGCTCCTTCCCAGGACCCCTCAGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTT GTTTCACCTTCCATGTCAGGCCAGCCTGTCCCTGAAAGAGAAGATGGCCATGCCCTCCATGTGTAAGAACAATGCCAGGGCCCAGGAGGA CCGCCTGCCCTGCCTGGGCCTTGGCTGGGCCTCTGGTTCTGACACTTTCTGCTGGAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGG >12806_12806_9_CANX-SQSTM1_CANX_chr5_179137066_ENST00000512607_SQSTM1_chr5_179260032_ENST00000376929_length(amino acids)=360AA_BP=1 MLLLHLPRLLTKLQFQQGKYILLILLTEELCQGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIE CGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLSIEVDIDVE HGGKRSRLTPVSPESSSTEEKSSSQPSSCCSDPSKPGGNVEGATQSLAEQMRKIALESEGRPEEQMESDNCSGGDDDWTHLSSKEVDPST GELQSLQMPESEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTIQYSKHPPPL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CANX-SQSTM1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 347_352 | 167.33333333333334 | 357.0 | KEAP1 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 347_352 | 167.33333333333334 | 357.0 | KEAP1 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 347_352 | 251.33333333333334 | 441.0 | KEAP1 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 347_352 | 167.33333333333334 | 357.0 | KEAP1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 347_352 | 167.33333333333334 | 357.0 | KEAP1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 347_352 | 167.33333333333334 | 357.0 | KEAP1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 347_352 | 251.33333333333334 | 441.0 | KEAP1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 347_352 | 167.33333333333334 | 357.0 | KEAP1 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 269_440 | 167.33333333333334 | 357.0 | NTRK1 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 269_440 | 167.33333333333334 | 357.0 | NTRK1 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 269_440 | 251.33333333333334 | 441.0 | NTRK1 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 269_440 | 167.33333333333334 | 357.0 | NTRK1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 269_440 | 167.33333333333334 | 357.0 | NTRK1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 269_440 | 167.33333333333334 | 357.0 | NTRK1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 269_440 | 251.33333333333334 | 441.0 | NTRK1 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 269_440 | 167.33333333333334 | 357.0 | NTRK1 |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000247461 | + | 4 | 15 | 326_359 | 101.33333333333333 | 593.0 | PPIB |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000452673 | + | 4 | 15 | 326_359 | 101.33333333333333 | 593.0 | PPIB |
Hgene | CANX | chr5:179134191 | chr5:179260032 | ENST00000504734 | + | 4 | 15 | 326_359 | 101.33333333333333 | 593.0 | PPIB |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000247461 | + | 7 | 15 | 326_359 | 240.33333333333334 | 593.0 | PPIB |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000452673 | + | 7 | 15 | 326_359 | 240.33333333333334 | 593.0 | PPIB |
Hgene | CANX | chr5:179137066 | chr5:179260032 | ENST00000504734 | + | 7 | 15 | 326_359 | 240.33333333333334 | 593.0 | PPIB |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 122_224 | 167.33333333333334 | 357.0 | GABRR3 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 122_224 | 167.33333333333334 | 357.0 | GABRR3 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 122_224 | 251.33333333333334 | 441.0 | GABRR3 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 122_224 | 167.33333333333334 | 357.0 | GABRR3 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 122_224 | 167.33333333333334 | 357.0 | GABRR3 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 122_224 | 167.33333333333334 | 357.0 | GABRR3 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 122_224 | 251.33333333333334 | 441.0 | GABRR3 | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 122_224 | 167.33333333333334 | 357.0 | GABRR3 | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 2_50 | 167.33333333333334 | 357.0 | LCK | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 2_50 | 167.33333333333334 | 357.0 | LCK | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 2_50 | 251.33333333333334 | 441.0 | LCK | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 2_50 | 167.33333333333334 | 357.0 | LCK | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 2_50 | 167.33333333333334 | 357.0 | LCK | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 2_50 | 167.33333333333334 | 357.0 | LCK | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 2_50 | 251.33333333333334 | 441.0 | LCK | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 2_50 | 167.33333333333334 | 357.0 | LCK | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 50_80 | 167.33333333333334 | 357.0 | PAWR | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 50_80 | 167.33333333333334 | 357.0 | PAWR | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 50_80 | 251.33333333333334 | 441.0 | PAWR | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 50_80 | 167.33333333333334 | 357.0 | PAWR | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 50_80 | 167.33333333333334 | 357.0 | PAWR | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 50_80 | 167.33333333333334 | 357.0 | PAWR | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 50_80 | 251.33333333333334 | 441.0 | PAWR | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 50_80 | 167.33333333333334 | 357.0 | PAWR | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000360718 | 3 | 7 | 43_107 | 167.33333333333334 | 357.0 | PRKCZ and dimerization | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000376929 | 5 | 9 | 43_107 | 167.33333333333334 | 357.0 | PRKCZ and dimerization | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000389805 | 4 | 8 | 43_107 | 251.33333333333334 | 441.0 | PRKCZ and dimerization | |
Tgene | SQSTM1 | chr5:179134191 | chr5:179260032 | ENST00000402874 | 4 | 8 | 43_107 | 167.33333333333334 | 357.0 | PRKCZ and dimerization | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000360718 | 3 | 7 | 43_107 | 167.33333333333334 | 357.0 | PRKCZ and dimerization | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000376929 | 5 | 9 | 43_107 | 167.33333333333334 | 357.0 | PRKCZ and dimerization | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000389805 | 4 | 8 | 43_107 | 251.33333333333334 | 441.0 | PRKCZ and dimerization | |
Tgene | SQSTM1 | chr5:179137066 | chr5:179260032 | ENST00000402874 | 4 | 8 | 43_107 | 167.33333333333334 | 357.0 | PRKCZ and dimerization |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CANX-SQSTM1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Hgene | CANX | P27824 | DB00031 | Tenecteplase | Biotech | Approved | |
Hgene | CANX | P27824 | DB11348 | Calcium Phosphate | Ligand | Small molecule | Approved |
Hgene | CANX | P27824 | DB13999 | Moroctocog alfa | Chaperone | Biotech | Approved |
Hgene | CANX | P27824 | DB14481 | Calcium phosphate dihydrate | Small molecule | Approved | |
Hgene | CANX | P27824 | DB00025 | Antihemophilic factor, human recombinant | Chaperone | Biotech | Approved|Investigational |
Hgene | CANX | P27824 | DB11093 | Calcium citrate | Ligand | Small molecule | Approved|Investigational |
Hgene | CANX | P27824 | DB13998 | Lonoctocog alfa | Chaperone | Biotech | Approved|Investigational |
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Related Diseases for CANX-SQSTM1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CANX | C0019193 | Hepatitis, Toxic | 1 | CTD_human |
Hgene | CANX | C0151744 | Myocardial Ischemia | 1 | CTD_human |
Hgene | CANX | C0860207 | Drug-Induced Liver Disease | 1 | CTD_human |
Hgene | CANX | C1262760 | Hepatitis, Drug-Induced | 1 | CTD_human |
Hgene | CANX | C3658290 | Drug-Induced Acute Liver Injury | 1 | CTD_human |
Hgene | CANX | C4277682 | Chemical and Drug Induced Liver Injury | 1 | CTD_human |
Hgene | CANX | C4279912 | Chemically-Induced Liver Toxicity | 1 | CTD_human |
Tgene | C4085252 | PAGET DISEASE OF BONE 3 | 9 | GENOMICS_ENGLAND;UNIPROT | |
Tgene | C0002736 | Amyotrophic Lateral Sclerosis | 5 | CTD_human;ORPHANET | |
Tgene | C4225326 | FRONTOTEMPORAL DEMENTIA AND/OR AMYOTROPHIC LATERAL SCLEROSIS 3 | 4 | CTD_human;UNIPROT | |
Tgene | C0029463 | Osteosarcoma | 2 | GENOMICS_ENGLAND | |
Tgene | C0221054 | Welander Distal Myopathy | 1 | ORPHANET | |
Tgene | C0242383 | Age related macular degeneration | 1 | CTD_human | |
Tgene | C0393554 | Amyotrophic Lateral Sclerosis With Dementia | 1 | CTD_human | |
Tgene | C0543859 | Amyotrophic Lateral Sclerosis, Guam Form | 1 | CTD_human | |
Tgene | C1853926 | NONAKA MYOPATHY | 1 | CTD_human;GENOMICS_ENGLAND | |
Tgene | C2931290 | Welander distal myopathy, Swedish type | 1 | ORPHANET | |
Tgene | C3888102 | Frontotemporal Dementia With Motor Neuron Disease | 1 | ORPHANET | |
Tgene | C4011788 | Behavioral variant of frontotemporal dementia | 1 | ORPHANET |