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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:RPAIN-FHIT (FusionGDB2 ID:HG84268TG2272) |
Fusion Gene Summary for RPAIN-FHIT |
Fusion gene summary |
Fusion gene information | Fusion gene name: RPAIN-FHIT | Fusion gene ID: hg84268tg2272 | Hgene | Tgene | Gene symbol | RPAIN | FHIT | Gene ID | 84268 | 2272 |
Gene name | RPA interacting protein | fragile histidine triad diadenosine triphosphatase | |
Synonyms | HRIP|RIP | AP3Aase|FRA3B | |
Cytomap | ('RPAIN')('FHIT') 17p13.2 | 3p14.2 | |
Type of gene | protein-coding | protein-coding | |
Description | RPA-interacting proteinRAP interaction proteinnuclear transporter | bis(5'-adenosyl)-triphosphataseAP3A hydrolasediadenosine 5',5'''-P1,P3-triphosphate hydrolasedinucleosidetriphosphatase | |
Modification date | 20200320 | 20200313 | |
UniProtAcc | . | P49789 | |
Ensembl transtripts involved in fusion gene | ENST00000327154, ENST00000381208, ENST00000381209, ENST00000405578, ENST00000536255, ENST00000574003, | ||
Fusion gene scores | * DoF score | 8 X 8 X 4=256 | 27 X 20 X 11=5940 |
# samples | 10 | 32 | |
** MAII score | log2(10/256*10)=-1.35614381022528 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(32/5940*10)=-4.21431912080077 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: RPAIN [Title/Abstract] AND FHIT [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | RPAIN(5326149)-FHIT(59908140), # samples:4 | ||
Anticipated loss of major functional domain due to fusion event. | RPAIN-FHIT seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. RPAIN-FHIT seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. RPAIN-FHIT seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. RPAIN-FHIT seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. RPAIN-FHIT seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. RPAIN-FHIT seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. RPAIN-FHIT seems lost the major protein functional domain in Tgene partner, which is a CGC due to the frame-shifted ORF. RPAIN-FHIT seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | RPAIN | GO:0006606 | protein import into nucleus | 16135809 |
Tgene | FHIT | GO:0006163 | purine nucleotide metabolic process | 9323207 |
Fusion gene breakpoints across RPAIN (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across FHIT (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-A7-A0CJ-01A | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
ChimerDB4 | BRCA | TCGA-A7-A0CJ-01A | RPAIN | chr17 | 5326149 | - | FHIT | chr3 | 59908140 | - |
ChimerDB4 | BRCA | TCGA-A7-A0CJ-01A | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
ChimerDB4 | BRCA | TCGA-A7-A0CJ-01A | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
ChimerDB4 | BRCA | TCGA-A7-A0CJ-01A | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
ChimerDB4 | BRCA | TCGA-A7-A0CJ | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Top |
Fusion Gene ORF analysis for RPAIN-FHIT |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000327154 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000327154 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000327154 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000327154 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000327154 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000327154 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000381208 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000381208 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000381208 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000381208 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000381208 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000381208 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000381209 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000381209 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000381209 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000381209 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000381209 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000381209 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000405578 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000405578 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000405578 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000405578 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000405578 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000405578 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000536255 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000536255 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000536255 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000536255 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000536255 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000536255 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000574003 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000574003 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000574003 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000574003 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-5UTR | ENST00000574003 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
5CDS-5UTR | ENST00000574003 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
5CDS-intron | ENST00000327154 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000327154 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000327154 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000327154 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000327154 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000327154 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000327154 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000327154 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000381208 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000381208 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000381208 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000381208 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000381208 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000381208 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000381208 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000381208 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000381209 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000381209 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000381209 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000381209 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000381209 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000381209 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000381209 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000381209 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000405578 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000405578 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000405578 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000405578 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000405578 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000405578 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000405578 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000405578 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000536255 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000536255 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000536255 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000536255 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000536255 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000536255 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000536255 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000536255 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000574003 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000574003 | ENST00000341848 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000574003 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000574003 | ENST00000466788 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000574003 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
5CDS-intron | ENST00000574003 | ENST00000468189 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000574003 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
5CDS-intron | ENST00000574003 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999990 | - |
Frame-shift | ENST00000327154 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000327154 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Frame-shift | ENST00000327154 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000327154 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Frame-shift | ENST00000381208 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000381208 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Frame-shift | ENST00000381208 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000381208 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Frame-shift | ENST00000381209 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000381209 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Frame-shift | ENST00000381209 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000381209 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Frame-shift | ENST00000405578 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000405578 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Frame-shift | ENST00000405578 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000405578 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Frame-shift | ENST00000536255 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000536255 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Frame-shift | ENST00000536255 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000536255 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Frame-shift | ENST00000574003 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000574003 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
Frame-shift | ENST00000574003 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59738047 | - |
Frame-shift | ENST00000574003 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59908140 | - |
In-frame | ENST00000327154 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
In-frame | ENST00000327154 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
In-frame | ENST00000381208 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
In-frame | ENST00000381208 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
In-frame | ENST00000381209 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
In-frame | ENST00000381209 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
In-frame | ENST00000405578 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
In-frame | ENST00000405578 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
In-frame | ENST00000536255 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
In-frame | ENST00000536255 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
In-frame | ENST00000574003 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
In-frame | ENST00000574003 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000536255 | RPAIN | chr17 | 5326149 | + | ENST00000476844 | FHIT | chr3 | 59999878 | - | 1488 | 883 | 468 | 1223 | 251 |
ENST00000536255 | RPAIN | chr17 | 5326149 | + | ENST00000492590 | FHIT | chr3 | 59999878 | - | 1499 | 883 | 468 | 1223 | 251 |
ENST00000381208 | RPAIN | chr17 | 5326149 | + | ENST00000476844 | FHIT | chr3 | 59999878 | - | 1488 | 883 | 468 | 1223 | 251 |
ENST00000381208 | RPAIN | chr17 | 5326149 | + | ENST00000492590 | FHIT | chr3 | 59999878 | - | 1499 | 883 | 468 | 1223 | 251 |
ENST00000381209 | RPAIN | chr17 | 5326149 | + | ENST00000476844 | FHIT | chr3 | 59999878 | - | 1488 | 883 | 468 | 1223 | 251 |
ENST00000381209 | RPAIN | chr17 | 5326149 | + | ENST00000492590 | FHIT | chr3 | 59999878 | - | 1499 | 883 | 468 | 1223 | 251 |
ENST00000327154 | RPAIN | chr17 | 5326149 | + | ENST00000476844 | FHIT | chr3 | 59999878 | - | 1241 | 636 | 221 | 976 | 251 |
ENST00000327154 | RPAIN | chr17 | 5326149 | + | ENST00000492590 | FHIT | chr3 | 59999878 | - | 1252 | 636 | 221 | 976 | 251 |
ENST00000405578 | RPAIN | chr17 | 5326149 | + | ENST00000476844 | FHIT | chr3 | 59999878 | - | 929 | 324 | 11 | 664 | 217 |
ENST00000405578 | RPAIN | chr17 | 5326149 | + | ENST00000492590 | FHIT | chr3 | 59999878 | - | 940 | 324 | 11 | 664 | 217 |
ENST00000574003 | RPAIN | chr17 | 5326149 | + | ENST00000476844 | FHIT | chr3 | 59999878 | - | 927 | 322 | 9 | 662 | 217 |
ENST00000574003 | RPAIN | chr17 | 5326149 | + | ENST00000492590 | FHIT | chr3 | 59999878 | - | 938 | 322 | 9 | 662 | 217 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000536255 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.003757431 | 0.99624264 |
ENST00000536255 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.003467883 | 0.9965321 |
ENST00000381208 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.003757431 | 0.99624264 |
ENST00000381208 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.003467883 | 0.9965321 |
ENST00000381209 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.003757431 | 0.99624264 |
ENST00000381209 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.003467883 | 0.9965321 |
ENST00000327154 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.00336837 | 0.9966317 |
ENST00000327154 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.003365065 | 0.9966349 |
ENST00000405578 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.002899917 | 0.99710006 |
ENST00000405578 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.002799886 | 0.99720013 |
ENST00000574003 | ENST00000476844 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.002855609 | 0.9971444 |
ENST00000574003 | ENST00000492590 | RPAIN | chr17 | 5326149 | + | FHIT | chr3 | 59999878 | - | 0.002884568 | 0.9971154 |
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Fusion Genomic Features for RPAIN-FHIT |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
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Fusion Protein Features for RPAIN-FHIT |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr17:5326149/chr3:59908140) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | FHIT |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Possesses dinucleoside triphosphate hydrolase activity (PubMed:12574506, PubMed:15182206, PubMed:8794732, PubMed:9323207, PubMed:9576908, PubMed:9543008). Cleaves P(1)-P(3)-bis(5'-adenosyl) triphosphate (Ap3A) to yield AMP and ADP (PubMed:12574506, PubMed:15182206, PubMed:8794732, PubMed:9323207, PubMed:9576908, PubMed:9543008). Can also hydrolyze P(1)-P(4)-bis(5'-adenosyl) tetraphosphate (Ap4A), but has extremely low activity with ATP (PubMed:8794732). Exhibits adenylylsulfatase activity, hydrolyzing adenosine 5'-phosphosulfate to yield AMP and sulfate (PubMed:18694747). Exhibits adenosine 5'-monophosphoramidase activity, hydrolyzing purine nucleotide phosphoramidates with a single phosphate group such as adenosine 5'monophosphoramidate (AMP-NH2) to yield AMP and NH2 (PubMed:18694747). Exhibits adenylylsulfate-ammonia adenylyltransferase, catalyzing the ammonolysis of adenosine 5'-phosphosulfate resulting in the formation of adenosine 5'-phosphoramidate (PubMed:26181368). Also catalyzes the ammonolysis of adenosine 5-phosphorofluoridate and diadenosine triphosphate (PubMed:26181368). Modulates transcriptional activation by CTNNB1 and thereby contributes to regulate the expression of genes essential for cell proliferation and survival, such as CCND1 and BIRC5 (PubMed:18077326). Plays a role in the induction of apoptosis via SRC and AKT1 signaling pathways (PubMed:16407838). Inhibits MDM2-mediated proteasomal degradation of p53/TP53 and thereby plays a role in p53/TP53-mediated apoptosis (PubMed:15313915). Induction of apoptosis depends on the ability of FHIT to bind P(1)-P(3)-bis(5'-adenosyl) triphosphate or related compounds, but does not require its catalytic activity, it may in part come from the mitochondrial form, which sensitizes the low-affinity Ca(2+) transporters, enhancing mitochondrial calcium uptake (PubMed:12574506, PubMed:19622739). Functions as tumor suppressor (By similarity). {ECO:0000250|UniProtKB:O89106, ECO:0000269|PubMed:12574506, ECO:0000269|PubMed:15313915, ECO:0000269|PubMed:16407838, ECO:0000269|PubMed:18077326, ECO:0000269|PubMed:18694747, ECO:0000269|PubMed:19622739, ECO:0000269|PubMed:26181368, ECO:0000269|PubMed:8794732, ECO:0000269|PubMed:9323207, ECO:0000269|PubMed:9543008}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000341848 | 0 | 5 | 94_98 | 34 | 148.0 | Motif | Histidine triad motif | |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000468189 | 4 | 9 | 94_98 | 34 | 148.0 | Motif | Histidine triad motif | |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000476844 | 4 | 10 | 94_98 | 34 | 214.0 | Motif | Histidine triad motif | |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000492590 | 4 | 10 | 94_98 | 34 | 205.33333333333334 | Motif | Histidine triad motif | |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000341848 | 0 | 5 | 89_92 | 34 | 148.0 | Nucleotide binding | Substrate | |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000468189 | 4 | 9 | 89_92 | 34 | 148.0 | Nucleotide binding | Substrate | |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000476844 | 4 | 10 | 89_92 | 34 | 214.0 | Nucleotide binding | Substrate | |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000492590 | 4 | 10 | 89_92 | 34 | 205.33333333333334 | Nucleotide binding | Substrate |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RPAIN | chr17:5326149 | chr3:59999878 | ENST00000536255 | + | 3 | 4 | 164_180 | 104 | 107.0 | Region | Note=Mediates nuclear export |
Hgene | RPAIN | chr17:5326149 | chr3:59999878 | ENST00000536255 | + | 3 | 4 | 137_212 | 104 | 107.0 | Zinc finger | Note=RIP-type |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000341848 | 0 | 5 | 2_109 | 34 | 148.0 | Domain | HIT | |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000468189 | 4 | 9 | 2_109 | 34 | 148.0 | Domain | HIT | |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000476844 | 4 | 10 | 2_109 | 34 | 214.0 | Domain | HIT | |
Tgene | FHIT | chr17:5326149 | chr3:59999878 | ENST00000492590 | 4 | 10 | 2_109 | 34 | 205.33333333333334 | Domain | HIT |
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Fusion Gene Sequence for RPAIN-FHIT |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>75691_75691_1_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000327154_FHIT_chr3_59999878_ENST00000476844_length(transcript)=1241nt_BP=636nt ATGGTGGTGCTGCTGGAAATCTAGCACCTGGGGAGAGCCTGAGACTTGTGTATCTAATTGCCTATTGGACACCTCCATCTGGGTAAACCC AGGCATCCAGAACTTTCCCTCAAGACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCCTAAATCTGTCTC CACGTGGGGCCGGTCGATAAAACAACACTTCCCAGAATACGCTGCGATCCATTCGCGGTCTGCACCCGGAAAGTACACCTCCCAGGGGTC TGTGCGCGCCTCCAGGGAACGGGTCTTGTGGCTTTGTCTCCCGCGAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGT ACAAACTGGTGGGCTCGCCGCCTTGGAAAGAGGCTTTCCGGCAGAGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACA GGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAACAGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGC AGTCAGTGGAGAATTGTCCAGAAGACTTGGCTCAGCTGGAGGAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCA ACCAAGATGTCCTTGTGTGCCCGCTGCGGCCAGTGGAGCGCTTCCATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCC AGAGAGTCGGGACAGTGGTGGAAAAACATTTCCATGGGACCTCTCTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGA AGCACGTTCACGTCCATGTTCTTCCCAGGAAGGCTGGAGACTTTCACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGG AGGACTTTCCTGCCTCTTGGAGATCAGAGGAGGAAATGGCAGCAGAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATCCTGAA TTCCAGCAAAAGAGCTATTGCCAACCAGTTTGAAGACCGCCCCCCGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAAATGCAGTTTCT TCATCTCACCATCCTGTATTCTTCAACCAGTGATCCCCCACCTCGGTCACTCCAACTCCCTTAAAATACCTAGACCTAAACGGCTCAGAC >75691_75691_1_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000327154_FHIT_chr3_59999878_ENST00000476844_length(amino acids)=251AA_BP=138 MRSIRGLHPESTPPRGLCAPPGNGSCGFVSREEEMAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQ NSFLVQEVMEEEWNALQSVENCPEDLAQLEELIDMAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGT -------------------------------------------------------------- >75691_75691_2_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000327154_FHIT_chr3_59999878_ENST00000492590_length(transcript)=1252nt_BP=636nt ATGGTGGTGCTGCTGGAAATCTAGCACCTGGGGAGAGCCTGAGACTTGTGTATCTAATTGCCTATTGGACACCTCCATCTGGGTAAACCC AGGCATCCAGAACTTTCCCTCAAGACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCCTAAATCTGTCTC CACGTGGGGCCGGTCGATAAAACAACACTTCCCAGAATACGCTGCGATCCATTCGCGGTCTGCACCCGGAAAGTACACCTCCCAGGGGTC TGTGCGCGCCTCCAGGGAACGGGTCTTGTGGCTTTGTCTCCCGCGAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGT ACAAACTGGTGGGCTCGCCGCCTTGGAAAGAGGCTTTCCGGCAGAGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACA GGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAACAGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGC AGTCAGTGGAGAATTGTCCAGAAGACTTGGCTCAGCTGGAGGAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCA ACCAAGATGTCCTTGTGTGCCCGCTGCGGCCAGTGGAGCGCTTCCATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCC AGAGAGTCGGGACAGTGGTGGAAAAACATTTCCATGGGACCTCTCTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGA AGCACGTTCACGTCCATGTTCTTCCCAGGAAGGCTGGAGACTTTCACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGG AGGACTTTCCTGCCTCTTGGAGATCAGAGGAGGAAATGGCAGCAGAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATGTTTTT CAGATCCTGAATTCCAGCAAAAGAGCTATTGCCAACCAGTTTGAAGACCGCCCCCCGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAA ATGCAGTTTCTTCATCTCACCATCCTGTATTCTTCAACCAGTGATCCCCCACCTCGGTCACTCCAACTCCCTTAAAATACCTAGACCTAA >75691_75691_2_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000327154_FHIT_chr3_59999878_ENST00000492590_length(amino acids)=251AA_BP=138 MRSIRGLHPESTPPRGLCAPPGNGSCGFVSREEEMAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQ NSFLVQEVMEEEWNALQSVENCPEDLAQLEELIDMAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGT -------------------------------------------------------------- >75691_75691_3_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000381208_FHIT_chr3_59999878_ENST00000476844_length(transcript)=1488nt_BP=883nt CGGCCGCCATCTTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCACTCACTGTT TCGGCCAATCACCGAGCAGACGGCCCGGAAGCTCGAGAGGCTCGTGCCAGGTCGGGGGGCGAAGGCGAGGCCAGCCCACCAAGCAGGGGC GTCACCAAGGGAAAGCCAATCACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCTGCTGGAAATCTA GCACCTGGGGAGAGCCTGAGACTTGTGTATCTAATTGCCTATTGGACACCTCCATCTGGGTAAACCCAGGCATCCAGAACTTTCCCTCAA GACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCCTAAATCTGTCTCCACGTGGGGCCGGTCGATAAAAC AACACTTCCCAGAATACGCTGCGATCCATTCGCGGTCTGCACCCGGAAAGTACACCTCCCAGGGGTCTGTGCGCGCCTCCAGGGAACGGG TCTTGTGGCTTTGTCTCCCGCGAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCT TGGAAAGAGGCTTTCCGGCAGAGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGT GGGCCAGGGAATTCTCAGAACAGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCAGAA GACTTGGCTCAGCTGGAGGAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGATGTCCTTGTGTGCCCG CTGCGGCCAGTGGAGCGCTTCCATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCCAGAGAGTCGGGACAGTGGTGGAA AAACATTTCCATGGGACCTCTCTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGAAGCACGTTCACGTCCATGTTCTT CCCAGGAAGGCTGGAGACTTTCACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGGAGGACTTTCCTGCCTCTTGGAGA TCAGAGGAGGAAATGGCAGCAGAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATCCTGAATTCCAGCAAAAGAGCTATTGCCA ACCAGTTTGAAGACCGCCCCCCGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAAATGCAGTTTCTTCATCTCACCATCCTGTATTCTT CAACCAGTGATCCCCCACCTCGGTCACTCCAACTCCCTTAAAATACCTAGACCTAAACGGCTCAGACAGGCAGATTTGAGGTTTCCCCCT >75691_75691_3_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000381208_FHIT_chr3_59999878_ENST00000476844_length(amino acids)=251AA_BP=138 MRSIRGLHPESTPPRGLCAPPGNGSCGFVSREEEMAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQ NSFLVQEVMEEEWNALQSVENCPEDLAQLEELIDMAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGT -------------------------------------------------------------- >75691_75691_4_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000381208_FHIT_chr3_59999878_ENST00000492590_length(transcript)=1499nt_BP=883nt CGGCCGCCATCTTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCACTCACTGTT TCGGCCAATCACCGAGCAGACGGCCCGGAAGCTCGAGAGGCTCGTGCCAGGTCGGGGGGCGAAGGCGAGGCCAGCCCACCAAGCAGGGGC GTCACCAAGGGAAAGCCAATCACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCTGCTGGAAATCTA GCACCTGGGGAGAGCCTGAGACTTGTGTATCTAATTGCCTATTGGACACCTCCATCTGGGTAAACCCAGGCATCCAGAACTTTCCCTCAA GACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCCTAAATCTGTCTCCACGTGGGGCCGGTCGATAAAAC AACACTTCCCAGAATACGCTGCGATCCATTCGCGGTCTGCACCCGGAAAGTACACCTCCCAGGGGTCTGTGCGCGCCTCCAGGGAACGGG TCTTGTGGCTTTGTCTCCCGCGAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCT TGGAAAGAGGCTTTCCGGCAGAGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGT GGGCCAGGGAATTCTCAGAACAGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCAGAA GACTTGGCTCAGCTGGAGGAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGATGTCCTTGTGTGCCCG CTGCGGCCAGTGGAGCGCTTCCATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCCAGAGAGTCGGGACAGTGGTGGAA AAACATTTCCATGGGACCTCTCTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGAAGCACGTTCACGTCCATGTTCTT CCCAGGAAGGCTGGAGACTTTCACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGGAGGACTTTCCTGCCTCTTGGAGA TCAGAGGAGGAAATGGCAGCAGAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATGTTTTTCAGATCCTGAATTCCAGCAAAAG AGCTATTGCCAACCAGTTTGAAGACCGCCCCCCGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAAATGCAGTTTCTTCATCTCACCAT CCTGTATTCTTCAACCAGTGATCCCCCACCTCGGTCACTCCAACTCCCTTAAAATACCTAGACCTAAACGGCTCAGACAGGCAGATTTGA >75691_75691_4_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000381208_FHIT_chr3_59999878_ENST00000492590_length(amino acids)=251AA_BP=138 MRSIRGLHPESTPPRGLCAPPGNGSCGFVSREEEMAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQ NSFLVQEVMEEEWNALQSVENCPEDLAQLEELIDMAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGT -------------------------------------------------------------- >75691_75691_5_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000381209_FHIT_chr3_59999878_ENST00000476844_length(transcript)=1488nt_BP=883nt CGGCCGCCATCTTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCACTCACTGTT TCGGCCAATCACCGAGCAGACGGCCCGGAAGCTCGAGAGGCTCGTGCCAGGTCGGGGGGCGAAGGCGAGGCCAGCCCACCAAGCAGGGGC GTCACCAAGGGAAAGCCAATCACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCTGCTGGAAATCTA GCACCTGGGGAGAGCCTGAGACTTGTGTATCTAATTGCCTATTGGACACCTCCATCTGGGTAAACCCAGGCATCCAGAACTTTCCCTCAA GACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCCTAAATCTGTCTCCACGTGGGGCCGGTCGATAAAAC AACACTTCCCAGAATACGCTGCGATCCATTCGCGGTCTGCACCCGGAAAGTACACCTCCCAGGGGTCTGTGCGCGCCTCCAGGGAACGGG TCTTGTGGCTTTGTCTCCCGCGAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCT TGGAAAGAGGCTTTCCGGCAGAGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGT GGGCCAGGGAATTCTCAGAACAGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCAGAA GACTTGGCTCAGCTGGAGGAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGATGTCCTTGTGTGCCCG CTGCGGCCAGTGGAGCGCTTCCATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCCAGAGAGTCGGGACAGTGGTGGAA AAACATTTCCATGGGACCTCTCTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGAAGCACGTTCACGTCCATGTTCTT CCCAGGAAGGCTGGAGACTTTCACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGGAGGACTTTCCTGCCTCTTGGAGA TCAGAGGAGGAAATGGCAGCAGAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATCCTGAATTCCAGCAAAAGAGCTATTGCCA ACCAGTTTGAAGACCGCCCCCCGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAAATGCAGTTTCTTCATCTCACCATCCTGTATTCTT CAACCAGTGATCCCCCACCTCGGTCACTCCAACTCCCTTAAAATACCTAGACCTAAACGGCTCAGACAGGCAGATTTGAGGTTTCCCCCT >75691_75691_5_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000381209_FHIT_chr3_59999878_ENST00000476844_length(amino acids)=251AA_BP=138 MRSIRGLHPESTPPRGLCAPPGNGSCGFVSREEEMAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQ NSFLVQEVMEEEWNALQSVENCPEDLAQLEELIDMAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGT -------------------------------------------------------------- >75691_75691_6_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000381209_FHIT_chr3_59999878_ENST00000492590_length(transcript)=1499nt_BP=883nt CGGCCGCCATCTTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCACTCACTGTT TCGGCCAATCACCGAGCAGACGGCCCGGAAGCTCGAGAGGCTCGTGCCAGGTCGGGGGGCGAAGGCGAGGCCAGCCCACCAAGCAGGGGC GTCACCAAGGGAAAGCCAATCACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCTGCTGGAAATCTA GCACCTGGGGAGAGCCTGAGACTTGTGTATCTAATTGCCTATTGGACACCTCCATCTGGGTAAACCCAGGCATCCAGAACTTTCCCTCAA GACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCCTAAATCTGTCTCCACGTGGGGCCGGTCGATAAAAC AACACTTCCCAGAATACGCTGCGATCCATTCGCGGTCTGCACCCGGAAAGTACACCTCCCAGGGGTCTGTGCGCGCCTCCAGGGAACGGG TCTTGTGGCTTTGTCTCCCGCGAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCT TGGAAAGAGGCTTTCCGGCAGAGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGT GGGCCAGGGAATTCTCAGAACAGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCAGAA GACTTGGCTCAGCTGGAGGAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGATGTCCTTGTGTGCCCG CTGCGGCCAGTGGAGCGCTTCCATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCCAGAGAGTCGGGACAGTGGTGGAA AAACATTTCCATGGGACCTCTCTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGAAGCACGTTCACGTCCATGTTCTT CCCAGGAAGGCTGGAGACTTTCACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGGAGGACTTTCCTGCCTCTTGGAGA TCAGAGGAGGAAATGGCAGCAGAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATGTTTTTCAGATCCTGAATTCCAGCAAAAG AGCTATTGCCAACCAGTTTGAAGACCGCCCCCCGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAAATGCAGTTTCTTCATCTCACCAT CCTGTATTCTTCAACCAGTGATCCCCCACCTCGGTCACTCCAACTCCCTTAAAATACCTAGACCTAAACGGCTCAGACAGGCAGATTTGA >75691_75691_6_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000381209_FHIT_chr3_59999878_ENST00000492590_length(amino acids)=251AA_BP=138 MRSIRGLHPESTPPRGLCAPPGNGSCGFVSREEEMAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQ NSFLVQEVMEEEWNALQSVENCPEDLAQLEELIDMAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGT -------------------------------------------------------------- >75691_75691_7_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000405578_FHIT_chr3_59999878_ENST00000476844_length(transcript)=929nt_BP=324nt GCGAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCTTGGAAAGAGGCTTTCCGGC AGAGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGA ACAGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCAGAAGACTTGGCTCAGCTGGAGG AGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGATGTCCTTGTGTGCCCGCTGCGGCCAGTGGAGCGCT TCCATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCCAGAGAGTCGGGACAGTGGTGGAAAAACATTTCCATGGGACCT CTCTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGAAGCACGTTCACGTCCATGTTCTTCCCAGGAAGGCTGGAGACT TTCACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGGAGGACTTTCCTGCCTCTTGGAGATCAGAGGAGGAAATGGCAG CAGAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATCCTGAATTCCAGCAAAAGAGCTATTGCCAACCAGTTTGAAGACCGCCC CCCGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAAATGCAGTTTCTTCATCTCACCATCCTGTATTCTTCAACCAGTGATCCCCCACC TCGGTCACTCCAACTCCCTTAAAATACCTAGACCTAAACGGCTCAGACAGGCAGATTTGAGGTTTCCCCCTGTCTCCTTATTCGGCAGCC >75691_75691_7_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000405578_FHIT_chr3_59999878_ENST00000476844_length(amino acids)=217AA_BP=104 MAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQNSFLVQEVMEEEWNALQSVENCPEDLAQLEELID MAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRN -------------------------------------------------------------- >75691_75691_8_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000405578_FHIT_chr3_59999878_ENST00000492590_length(transcript)=940nt_BP=324nt GCGAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCTTGGAAAGAGGCTTTCCGGC AGAGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGA ACAGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCAGAAGACTTGGCTCAGCTGGAGG AGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGATGTCCTTGTGTGCCCGCTGCGGCCAGTGGAGCGCT TCCATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCCAGAGAGTCGGGACAGTGGTGGAAAAACATTTCCATGGGACCT CTCTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGAAGCACGTTCACGTCCATGTTCTTCCCAGGAAGGCTGGAGACT TTCACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGGAGGACTTTCCTGCCTCTTGGAGATCAGAGGAGGAAATGGCAG CAGAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATGTTTTTCAGATCCTGAATTCCAGCAAAAGAGCTATTGCCAACCAGTTT GAAGACCGCCCCCCGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAAATGCAGTTTCTTCATCTCACCATCCTGTATTCTTCAACCAGT GATCCCCCACCTCGGTCACTCCAACTCCCTTAAAATACCTAGACCTAAACGGCTCAGACAGGCAGATTTGAGGTTTCCCCCTGTCTCCTT >75691_75691_8_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000405578_FHIT_chr3_59999878_ENST00000492590_length(amino acids)=217AA_BP=104 MAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQNSFLVQEVMEEEWNALQSVENCPEDLAQLEELID MAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRN -------------------------------------------------------------- >75691_75691_9_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000536255_FHIT_chr3_59999878_ENST00000476844_length(transcript)=1488nt_BP=883nt CGGCCGCCATCTTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCACTCACTGTT TCGGCCAATCACCGAGCAGACGGCCCGGAAGCTCGAGAGGCTCGTGCCAGGTCGGGGGGCGAAGGCGAGGCCAGCCCACCAAGCAGGGGC GTCACCAAGGGAAAGCCAATCACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCTGCTGGAAATCTA GCACCTGGGGAGAGCCTGAGACTTGTGTATCTAATTGCCTATTGGACACCTCCATCTGGGTAAACCCAGGCATCCAGAACTTTCCCTCAA GACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCCTAAATCTGTCTCCACGTGGGGCCGGTCGATAAAAC AACACTTCCCAGAATACGCTGCGATCCATTCGCGGTCTGCACCCGGAAAGTACACCTCCCAGGGGTCTGTGCGCGCCTCCAGGGAACGGG TCTTGTGGCTTTGTCTCCCGCGAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCT TGGAAAGAGGCTTTCCGGCAGAGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGT GGGCCAGGGAATTCTCAGAACAGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCAGAA GACTTGGCTCAGCTGGAGGAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGATGTCCTTGTGTGCCCG CTGCGGCCAGTGGAGCGCTTCCATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCCAGAGAGTCGGGACAGTGGTGGAA AAACATTTCCATGGGACCTCTCTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGAAGCACGTTCACGTCCATGTTCTT CCCAGGAAGGCTGGAGACTTTCACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGGAGGACTTTCCTGCCTCTTGGAGA TCAGAGGAGGAAATGGCAGCAGAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATCCTGAATTCCAGCAAAAGAGCTATTGCCA ACCAGTTTGAAGACCGCCCCCCGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAAATGCAGTTTCTTCATCTCACCATCCTGTATTCTT CAACCAGTGATCCCCCACCTCGGTCACTCCAACTCCCTTAAAATACCTAGACCTAAACGGCTCAGACAGGCAGATTTGAGGTTTCCCCCT >75691_75691_9_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000536255_FHIT_chr3_59999878_ENST00000476844_length(amino acids)=251AA_BP=138 MRSIRGLHPESTPPRGLCAPPGNGSCGFVSREEEMAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQ NSFLVQEVMEEEWNALQSVENCPEDLAQLEELIDMAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGT -------------------------------------------------------------- >75691_75691_10_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000536255_FHIT_chr3_59999878_ENST00000492590_length(transcript)=1499nt_BP=883nt CGGCCGCCATCTTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCACTCACTGTT TCGGCCAATCACCGAGCAGACGGCCCGGAAGCTCGAGAGGCTCGTGCCAGGTCGGGGGGCGAAGGCGAGGCCAGCCCACCAAGCAGGGGC GTCACCAAGGGAAAGCCAATCACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCTGCTGGAAATCTA GCACCTGGGGAGAGCCTGAGACTTGTGTATCTAATTGCCTATTGGACACCTCCATCTGGGTAAACCCAGGCATCCAGAACTTTCCCTCAA GACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCCTAAATCTGTCTCCACGTGGGGCCGGTCGATAAAAC AACACTTCCCAGAATACGCTGCGATCCATTCGCGGTCTGCACCCGGAAAGTACACCTCCCAGGGGTCTGTGCGCGCCTCCAGGGAACGGG TCTTGTGGCTTTGTCTCCCGCGAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCT TGGAAAGAGGCTTTCCGGCAGAGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGT GGGCCAGGGAATTCTCAGAACAGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCAGAA GACTTGGCTCAGCTGGAGGAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGATGTCCTTGTGTGCCCG CTGCGGCCAGTGGAGCGCTTCCATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCCAGAGAGTCGGGACAGTGGTGGAA AAACATTTCCATGGGACCTCTCTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGAAGCACGTTCACGTCCATGTTCTT CCCAGGAAGGCTGGAGACTTTCACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGGAGGACTTTCCTGCCTCTTGGAGA TCAGAGGAGGAAATGGCAGCAGAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATGTTTTTCAGATCCTGAATTCCAGCAAAAG AGCTATTGCCAACCAGTTTGAAGACCGCCCCCCGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAAATGCAGTTTCTTCATCTCACCAT CCTGTATTCTTCAACCAGTGATCCCCCACCTCGGTCACTCCAACTCCCTTAAAATACCTAGACCTAAACGGCTCAGACAGGCAGATTTGA >75691_75691_10_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000536255_FHIT_chr3_59999878_ENST00000492590_length(amino acids)=251AA_BP=138 MRSIRGLHPESTPPRGLCAPPGNGSCGFVSREEEMAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQ NSFLVQEVMEEEWNALQSVENCPEDLAQLEELIDMAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGT -------------------------------------------------------------- >75691_75691_11_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000574003_FHIT_chr3_59999878_ENST00000476844_length(transcript)=927nt_BP=322nt GAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCTTGGAAAGAGGCTTTCCGGCAG AGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAAC AGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCAGAAGACTTGGCTCAGCTGGAGGAG CTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGATGTCCTTGTGTGCCCGCTGCGGCCAGTGGAGCGCTTC CATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCCAGAGAGTCGGGACAGTGGTGGAAAAACATTTCCATGGGACCTCT CTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGAAGCACGTTCACGTCCATGTTCTTCCCAGGAAGGCTGGAGACTTT CACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGGAGGACTTTCCTGCCTCTTGGAGATCAGAGGAGGAAATGGCAGCA GAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATCCTGAATTCCAGCAAAAGAGCTATTGCCAACCAGTTTGAAGACCGCCCCC CGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAAATGCAGTTTCTTCATCTCACCATCCTGTATTCTTCAACCAGTGATCCCCCACCTC GGTCACTCCAACTCCCTTAAAATACCTAGACCTAAACGGCTCAGACAGGCAGATTTGAGGTTTCCCCCTGTCTCCTTATTCGGCAGCCTT >75691_75691_11_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000574003_FHIT_chr3_59999878_ENST00000476844_length(amino acids)=217AA_BP=104 MAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQNSFLVQEVMEEEWNALQSVENCPEDLAQLEELID MAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRN -------------------------------------------------------------- >75691_75691_12_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000574003_FHIT_chr3_59999878_ENST00000492590_length(transcript)=938nt_BP=322nt GAAGAGGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCTTGGAAAGAGGCTTTCCGGCAG AGATGCCTGGAGAGAATGAGAAACAGCCGGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAAC AGCTTTCTAGTTCAAGAGGTGATGGAAGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCAGAAGACTTGGCTCAGCTGGAGGAG CTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGATGTCCTTGTGTGCCCGCTGCGGCCAGTGGAGCGCTTC CATGACCTGCGTCCTGATGAAGTGGCCGATTTGTTTCAGACGACCCAGAGAGTCGGGACAGTGGTGGAAAAACATTTCCATGGGACCTCT CTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGAAGCACGTTCACGTCCATGTTCTTCCCAGGAAGGCTGGAGACTTT CACAGGAATGACAGCATCTATGAGGAGCTCCAGAAACATGACAAGGAGGACTTTCCTGCCTCTTGGAGATCAGAGGAGGAAATGGCAGCA GAAGCCGCAGCTCTGCGGGTCTACTTTCAGTGACACAGATGTTTTTCAGATCCTGAATTCCAGCAAAAGAGCTATTGCCAACCAGTTTGA AGACCGCCCCCCGCCTCTCCCCAAGAGGAACTGAATCAGCATGAAAATGCAGTTTCTTCATCTCACCATCCTGTATTCTTCAACCAGTGA TCCCCCACCTCGGTCACTCCAACTCCCTTAAAATACCTAGACCTAAACGGCTCAGACAGGCAGATTTGAGGTTTCCCCCTGTCTCCTTAT >75691_75691_12_RPAIN-FHIT_RPAIN_chr17_5326149_ENST00000574003_FHIT_chr3_59999878_ENST00000492590_length(amino acids)=217AA_BP=104 MAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRYRQAGSSGPGNSQNSFLVQEVMEEEWNALQSVENCPEDLAQLEELID MAVLEEIQQELINQDVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRN -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for RPAIN-FHIT |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for RPAIN-FHIT |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for RPAIN-FHIT |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | C0024121 | Lung Neoplasms | 2 | CTD_human | |
Tgene | C0025500 | Mesothelioma | 2 | CTD_human | |
Tgene | C0242379 | Malignant neoplasm of lung | 2 | CTD_human | |
Tgene | C0007097 | Carcinoma | 1 | CTD_human | |
Tgene | C0007131 | Non-Small Cell Lung Carcinoma | 1 | CTD_human | |
Tgene | C0013146 | Drug abuse | 1 | CTD_human | |
Tgene | C0013170 | Drug habituation | 1 | CTD_human | |
Tgene | C0013222 | Drug Use Disorders | 1 | CTD_human | |
Tgene | C0023903 | Liver neoplasms | 1 | CTD_human | |
Tgene | C0024623 | Malignant neoplasm of stomach | 1 | CTD_human | |
Tgene | C0029231 | Organic Mental Disorders, Substance-Induced | 1 | CTD_human | |
Tgene | C0033578 | Prostatic Neoplasms | 1 | CTD_human | |
Tgene | C0038356 | Stomach Neoplasms | 1 | CTD_human | |
Tgene | C0038580 | Substance Dependence | 1 | CTD_human | |
Tgene | C0038586 | Substance Use Disorders | 1 | CTD_human | |
Tgene | C0042076 | Urologic Neoplasms | 1 | CTD_human | |
Tgene | C0205696 | Anaplastic carcinoma | 1 | CTD_human | |
Tgene | C0205697 | Carcinoma, Spindle-Cell | 1 | CTD_human | |
Tgene | C0205698 | Undifferentiated carcinoma | 1 | CTD_human | |
Tgene | C0205699 | Carcinomatosis | 1 | CTD_human | |
Tgene | C0236733 | Amphetamine-Related Disorders | 1 | CTD_human | |
Tgene | C0236804 | Amphetamine Addiction | 1 | CTD_human | |
Tgene | C0236807 | Amphetamine Abuse | 1 | CTD_human | |
Tgene | C0236969 | Substance-Related Disorders | 1 | CTD_human | |
Tgene | C0345904 | Malignant neoplasm of liver | 1 | CTD_human | |
Tgene | C0376358 | Malignant neoplasm of prostate | 1 | CTD_human | |
Tgene | C0740858 | Substance abuse problem | 1 | CTD_human | |
Tgene | C0751571 | Cancer of Urinary Tract | 1 | CTD_human | |
Tgene | C1510472 | Drug Dependence | 1 | CTD_human | |
Tgene | C1708349 | Hereditary Diffuse Gastric Cancer | 1 | CTD_human | |
Tgene | C4316881 | Prescription Drug Abuse | 1 | CTD_human |