Fusion Gene Studies
in Kim Lab

FusionBase FusionGDB FusionGDB2 FusionPDB FusionNeoAntigen FusionAI FusionNW FGviewer Publication Contact
FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
leaf

Fusion Gene Summary

leaf

Fusion Gene ORF analysis

leaf

Fusion Genomic Features

leaf

Fusion Protein Features

leaf

Fusion Gene Sequence

leaf

Fusion Gene PPI analysis

leaf

Related Drugs

leaf

Related Diseases

Fusion gene:KDM2B-RHOF (FusionGDB2 ID:HG84678TG54509)

Fusion Gene Summary for KDM2B-RHOF

check button Fusion gene summary
Fusion gene informationFusion gene name: KDM2B-RHOF
Fusion gene ID: hg84678tg54509
HgeneTgene
Gene symbol

KDM2B

RHOF

Gene ID

84678

54509

Gene namelysine demethylase 2Bras homolog family member F, filopodia associated
SynonymsCXXC2|FBXL10|Fbl10|JHDM1B|PCCX2ARHF|RIF
Cytomap('KDM2B')('RHOF')

12q24.31

12q24.31

Type of geneprotein-codingprotein-coding
Descriptionlysine-specific demethylase 2BCXXC-type zinc finger protein 2F-box and leucine-rich repeat protein 10F-box protein FBL10F-box/LRR-repeat protein 10JEMMA (Jumonji domain, EMSY-interactor, methyltransferase motif) protein[Histone-H3]-lysine-36 demethyrho-related GTP-binding protein RhoFras homolog family member F (in filopodia)ras homolog gene family, member F (in filopodia)rho family GTPase Rifrho in filopodia
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000377069, ENST00000377071, 
ENST00000536437, ENST00000542973, 
ENST00000538046, ENST00000543852, 
Fusion gene scores* DoF score13 X 11 X 9=12871 X 2 X 2=4
# samples 152
** MAII scorelog2(15/1287*10)=-3.10097764772482
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(2/4*10)=2.32192809488736
Context

PubMed: KDM2B [Title/Abstract] AND RHOF [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointKDM2B(121932382)-RHOF(122231145), # samples:3
Anticipated loss of major functional domain due to fusion event.KDM2B-RHOF seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
KDM2B-RHOF seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
KDM2B-RHOF seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
KDM2B-RHOF seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
KDM2B-RHOF seems lost the major protein functional domain in Hgene partner, which is a epigenetic factor due to the frame-shifted ORF.
KDM2B-RHOF seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
KDM2B-RHOF seems lost the major protein functional domain in Hgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
KDM2B-RHOF seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneKDM2B

GO:0035518

histone H2A monoubiquitination

16943429

HgeneKDM2B

GO:0070544

histone H3-K36 demethylation

26237645

TgeneRHOF

GO:0007015

actin filament organization

11084341


check buttonFusion gene breakpoints across KDM2B (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure
check buttonFusion gene breakpoints across RHOF (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4STADTCGA-CD-A4MH-01AKDM2Bchr12

121932382

-RHOFchr12

122217568

-
ChimerDB4UCECTCGA-A5-A7WK-01AKDM2Bchr12

121932382

-RHOFchr12

122231145

-
ChimerDB4UCECTCGA-A5-A7WKKDM2Bchr12

121932382

-RHOFchr12

122231145

-


Top

Fusion Gene ORF analysis for KDM2B-RHOF

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000377069ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5CDS-5UTRENST00000377069ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5CDS-5UTRENST00000377069ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5CDS-5UTRENST00000377071ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5CDS-5UTRENST00000377071ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5CDS-5UTRENST00000377071ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5CDS-5UTRENST00000536437ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5CDS-5UTRENST00000536437ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5CDS-5UTRENST00000536437ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5CDS-intronENST00000377069ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122217568

-
5CDS-intronENST00000377069ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122217568

-
5CDS-intronENST00000377071ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122217568

-
5CDS-intronENST00000377071ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122217568

-
5CDS-intronENST00000536437ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122217568

-
5CDS-intronENST00000536437ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122217568

-
5UTR-3CDSENST00000542973ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122217568

-
5UTR-3CDSENST00000542973ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5UTR-3CDSENST00000542973ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122217568

-
5UTR-5UTRENST00000542973ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5UTR-5UTRENST00000542973ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5UTR-5UTRENST00000542973ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122231145

-
5UTR-intronENST00000542973ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122217568

-
5UTR-intronENST00000542973ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122217568

-
Frame-shiftENST00000377069ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122217568

-
Frame-shiftENST00000377071ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122217568

-
Frame-shiftENST00000536437ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122231145

-
Frame-shiftENST00000536437ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122217568

-
In-frameENST00000377069ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122231145

-
In-frameENST00000377069ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122217568

-
In-frameENST00000377071ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122231145

-
In-frameENST00000377071ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122217568

-
In-frameENST00000536437ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122217568

-
intron-3CDSENST00000538046ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122217568

-
intron-3CDSENST00000538046ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122231145

-
intron-3CDSENST00000538046ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122217568

-
intron-3CDSENST00000543852ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122217568

-
intron-3CDSENST00000543852ENST00000267205KDM2Bchr12

121932382

-RHOFchr12

122231145

-
intron-3CDSENST00000543852ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122217568

-
intron-5UTRENST00000538046ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122231145

-
intron-5UTRENST00000538046ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122231145

-
intron-5UTRENST00000538046ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122231145

-
intron-5UTRENST00000543852ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122231145

-
intron-5UTRENST00000543852ENST00000537265KDM2Bchr12

121932382

-RHOFchr12

122231145

-
intron-5UTRENST00000543852ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122231145

-
intron-intronENST00000538046ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122217568

-
intron-intronENST00000538046ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122217568

-
intron-intronENST00000543852ENST00000537171KDM2Bchr12

121932382

-RHOFchr12

122217568

-
intron-intronENST00000543852ENST00000545544KDM2Bchr12

121932382

-RHOFchr12

122217568

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000377069KDM2Bchr12121932382-ENST00000267205RHOFchr12122231145-428620483862545719
ENST00000377071KDM2Bchr12121932382-ENST00000267205RHOFchr12122231145-40451807732304743
ENST00000377069KDM2Bchr12121932382-ENST00000537265RHOFchr12122217568-229320483862212608
ENST00000377071KDM2Bchr12121932382-ENST00000537265RHOFchr12122217568-20521807731971632
ENST00000536437KDM2Bchr12121932382-ENST00000267205RHOFchr12122217568-360316983151862515

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000377069ENST00000267205KDM2Bchr12121932382-RHOFchr12122231145-0.0021443760.9978556
ENST00000377071ENST00000267205KDM2Bchr12121932382-RHOFchr12122231145-0.0020042590.99799573
ENST00000377069ENST00000537265KDM2Bchr12121932382-RHOFchr12122217568-0.002661690.99733835
ENST00000377071ENST00000537265KDM2Bchr12121932382-RHOFchr12122217568-0.0027188050.9972812
ENST00000536437ENST00000267205KDM2Bchr12121932382-RHOFchr12122217568-0.0021572460.9978428

Top

Fusion Genomic Features for KDM2B-RHOF


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

Top

Fusion Protein Features for KDM2B-RHOF


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:121932382/chr12:122231145)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-1223409_4305471266.0Compositional biasNote=Glu-rich
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-1223409_4305781337.0Compositional biasNote=Glu-rich
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-1223409_4305471266.0Compositional biasNote=Glu-rich
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-1223409_4305781337.0Compositional biasNote=Glu-rich
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-1223178_3465471266.0DomainJmjC
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-1223178_3465781337.0DomainJmjC
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-1223178_3465471266.0DomainJmjC
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-1223178_3465781337.0DomainJmjC
TgeneRHOFchr12:121932382chr12:122231145ENST000002672050548_5646212.0MotifEffector region
TgeneRHOFchr12:121932382chr12:122231145ENST0000026720505131_13446212.0Nucleotide bindingGTP
TgeneRHOFchr12:121932382chr12:122231145ENST000002672050573_7746212.0Nucleotide bindingGTP

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-1223943_9715471266.0Coiled coilOntology_term=ECO:0000255
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-1223943_9715781337.0Coiled coilOntology_term=ECO:0000255
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-214943_9710912.0Coiled coilOntology_term=ECO:0000255
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-1223943_9715471266.0Coiled coilOntology_term=ECO:0000255
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-1223943_9715781337.0Coiled coilOntology_term=ECO:0000255
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-214943_9710912.0Coiled coilOntology_term=ECO:0000255
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-12231014_10565471266.0Compositional biasNote=Pro-rich
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-12231014_10565781337.0Compositional biasNote=Pro-rich
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-2141014_10560912.0Compositional biasNote=Pro-rich
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-214409_4300912.0Compositional biasNote=Glu-rich
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-12231014_10565471266.0Compositional biasNote=Pro-rich
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-12231014_10565781337.0Compositional biasNote=Pro-rich
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-2141014_10560912.0Compositional biasNote=Pro-rich
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-214409_4300912.0Compositional biasNote=Glu-rich
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-12231059_11055471266.0DomainNote=F-box
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-12231059_11055781337.0DomainNote=F-box
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-2141059_11050912.0DomainNote=F-box
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-214178_3460912.0DomainJmjC
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-12231059_11055471266.0DomainNote=F-box
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-12231059_11055781337.0DomainNote=F-box
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-2141059_11050912.0DomainNote=F-box
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-214178_3460912.0DomainJmjC
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-12231093_11205471266.0RepeatNote=LRR 1
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-12231133_11545471266.0RepeatNote=LRR 2
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-12231156_11825471266.0RepeatNote=LRR 3
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-12231222_12475471266.0RepeatNote=LRR 4
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-12231248_12775471266.0RepeatNote=LRR 5
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-12231278_13025471266.0RepeatNote=LRR 6
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-12231303_13365471266.0RepeatNote=LRR 7
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-12231093_11205781337.0RepeatNote=LRR 1
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-12231133_11545781337.0RepeatNote=LRR 2
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-12231156_11825781337.0RepeatNote=LRR 3
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-12231222_12475781337.0RepeatNote=LRR 4
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-12231248_12775781337.0RepeatNote=LRR 5
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-12231278_13025781337.0RepeatNote=LRR 6
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-12231303_13365781337.0RepeatNote=LRR 7
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-2141093_11200912.0RepeatNote=LRR 1
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-2141133_11540912.0RepeatNote=LRR 2
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-2141156_11820912.0RepeatNote=LRR 3
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-2141222_12470912.0RepeatNote=LRR 4
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-2141248_12770912.0RepeatNote=LRR 5
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-2141278_13020912.0RepeatNote=LRR 6
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-2141303_13360912.0RepeatNote=LRR 7
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-12231093_11205471266.0RepeatNote=LRR 1
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-12231133_11545471266.0RepeatNote=LRR 2
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-12231156_11825471266.0RepeatNote=LRR 3
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-12231222_12475471266.0RepeatNote=LRR 4
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-12231248_12775471266.0RepeatNote=LRR 5
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-12231278_13025471266.0RepeatNote=LRR 6
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-12231303_13365471266.0RepeatNote=LRR 7
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-12231093_11205781337.0RepeatNote=LRR 1
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-12231133_11545781337.0RepeatNote=LRR 2
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-12231156_11825781337.0RepeatNote=LRR 3
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-12231222_12475781337.0RepeatNote=LRR 4
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-12231248_12775781337.0RepeatNote=LRR 5
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-12231278_13025781337.0RepeatNote=LRR 6
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-12231303_13365781337.0RepeatNote=LRR 7
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-2141093_11200912.0RepeatNote=LRR 1
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-2141133_11540912.0RepeatNote=LRR 2
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-2141156_11820912.0RepeatNote=LRR 3
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-2141222_12470912.0RepeatNote=LRR 4
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-2141248_12770912.0RepeatNote=LRR 5
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-2141278_13020912.0RepeatNote=LRR 6
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-2141303_13360912.0RepeatNote=LRR 7
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-1223606_6525471266.0Zinc fingerCXXC-type
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377069-1223659_7255471266.0Zinc fingerPHD-type
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-1223606_6525781337.0Zinc fingerCXXC-type
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000377071-1223659_7255781337.0Zinc fingerPHD-type
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-214606_6520912.0Zinc fingerCXXC-type
HgeneKDM2Bchr12:121932382chr12:122217568ENST00000542973-214659_7250912.0Zinc fingerPHD-type
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-1223606_6525471266.0Zinc fingerCXXC-type
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377069-1223659_7255471266.0Zinc fingerPHD-type
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-1223606_6525781337.0Zinc fingerCXXC-type
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000377071-1223659_7255781337.0Zinc fingerPHD-type
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-214606_6520912.0Zinc fingerCXXC-type
HgeneKDM2Bchr12:121932382chr12:122231145ENST00000542973-214659_7250912.0Zinc fingerPHD-type
TgeneRHOFchr12:121932382chr12:122217568ENST000002672053548_56157212.0MotifEffector region
TgeneRHOFchr12:121932382chr12:122217568ENST0000026720535131_134157212.0Nucleotide bindingGTP
TgeneRHOFchr12:121932382chr12:122217568ENST000002672053526_33157212.0Nucleotide bindingGTP
TgeneRHOFchr12:121932382chr12:122217568ENST000002672053573_77157212.0Nucleotide bindingGTP
TgeneRHOFchr12:121932382chr12:122231145ENST000002672050526_3346212.0Nucleotide bindingGTP


Top

Fusion Gene Sequence for KDM2B-RHOF


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>41752_41752_1_KDM2B-RHOF_KDM2B_chr12_121932382_ENST00000377069_RHOF_chr12_122217568_ENST00000537265_length(transcript)=2293nt_BP=2048nt
CCAACAACAAAACAGCGATGCCACGGCGCTAACGGCGCCCGGTGCCTCCCGGGCTCCCTCCCCGCCCCATACCTCCTCGGGCCGCCGCCC
CCACCCCCCCAAGCCCGGGCCGAGAGCCCCCCCAAATAGCCCGGCCGCGGGCTCCGAGCGCGATCGGCAACAATGTTTACGTTCCGGGGA
TTATGACGTCGACGCCTCCCCCCCCCCACAACTGCTGAAAATGGTTTCCTAGGACTTTGCAAACGGATCTGCCTAAGTGTTGGTGCAAAA
CTTTGTAGATCTCGGCTCTGGCTTGCTTTATTTATTTATTTTTTGGTTTGTTTTCTTTGGTCTTCCCTCCTTCCCCCCTCGGCCAAAATG
CAGGGGGCAGGAGTGTTGACAATTAATTGGTGAACTCTCCTAAAAAAATGGAGGCAGAGAAAGACTCTGGAAGAAGATTGCGCCCGATTG
ACCGCCAGCGATACGACGAGAACGAGGACTTGTCGGACGTGGAGGAGATCGTCAGCGTCCGCGGCTTCAGCCTGGAGGAGAAGCTTCGCA
GCCAGCTGTACCAGGGGGACTTCGTGCACGCCATGGAGGGCAAAGATTTCAACTATGAGTACGTACAGAGAGAAGCTCTCAGGGTTCCCC
TGATATTTCGAGAAAAGGATGGACTGGGAATTAAGATGCCTGACCCTGATTTCACAGTCCGAGACGTCAAACTCCTAGTGGGGAGCCGGC
GGCTTGTGGACGTGATGGATGTGAACACCCAGAAGGGCACGGAGATGAGCATGTCCCAGTTTGTGCGTTACTACGAGACGCCCGAGGCCC
AGCGGGACAAGCTGTACAACGTCATCAGCCTAGAGTTCAGCCACACCAAGCTGGAGCACTTGGTCAAGCGTCCGACTGTGGTAGACCTGG
TGGACTGGGTGGACAACATGTGGCCCCAGCATCTGAAGGAGAAGCAGACAGAAGCCACGAACGCCATTGCAGAGATGAAGTACCCGAAAG
TGAAAAAGTACTGTCTGATGAGCGTGAAAGGTTGTTTCACCGACTTCCACATCGACTTTGGAGGCACTTCCGTTTGGTACCATGTTTTCC
GGGGTGGGAAGATTTTTTGGCTGATTCCTCCAACGCTGCACAATTTGGCGCTGTACGAGGAGTGGGTGCTGTCAGGCAAACAGAGTGACA
TCTTTCTGGGAGACCGTGTGGAACGATGCCAAAGAATTGAGCTGAAGCAGGGCTACACATTTTTCATCCCTTCCGGTTGGATCCATGCCG
TCTACACCCCTGTAGACTCTTTGGTGTTCGGCGGAAACATCCTGCACAGCTTTAACGTGCCCATGCAGCTGCGGATCTACGAGATCGAGG
ACAGGACGCGGGTGCAGCCCAAATTCCGTTACCCCTTCTACTATGAGATGTGCTGGTATGTCCTGGAGAGATACGTGTACTGTGTGACCC
AGCGCTCCCACCTCACTCAGGAATACCAGAGGGAGTCGATGCTTATTGATGCCCCGAGGAAGCCCAGCATAGACGGCTTCTCTTCGGATT
CCTGGCTGGAGATGGAGGAGGAGGCCTGTGATCAGCAGCCTCAGGAGGAGGAGGAGAAGGACGAGGAGGGCGAGGGCAGGGACAGGGCAC
CCAAACCGCCCACCGATGGCTCCACTTCACCCACCAGCACGCCCTCTGAGGACCAGGAGGCCCTCGGGAAGAAGCCCAAAGCACCTGCCC
TGCGATTCCTCAAAAGGACTTTGTCTAATGAGTCGGAGGAAAGTGTGAAGTCCACCACATTGGCCGTAGACTACCCCAAGACCCCCACCG
GCTCTCCCGCCACGGAGGTCTCTGCCAAATGGACCCATCTCACTGAGTTTGAACTGAAGGGCCTGAAAGCTCTGGTGGAGAAACTGGAAT
CCCTCCCGGAGAACAAGAAGTGTGTCCCCGAGGGCATCGAGGACCCCCAGGCACTCCTGGAGGGTGTGAAGAACGTCCTGAAGGAGCACG
CAGATGATGACCCTAGTCTGGCCATCACTGGGGTCCCTGTGGTGACTTGGCCAAAGAAGACTCCAAAGGGCCTGAGCGCCTGCGAACAGA
TCCGAGCTGCTCTCTACCTGGAATGTTCCGCCAAGTTTCGGGAGAATGTGGAGGACGTCTTCCGGGAGGCCGCCAAGGTGGCTCTCAGCG
CTCTGAAGAAGGCGCAACGGCAGAAGAAGCGCCGGCTCTGCCTGCTGCTCTGACCCAGGGCAGACAGACCTCACGACAGCACTGACAGGG

>41752_41752_1_KDM2B-RHOF_KDM2B_chr12_121932382_ENST00000377069_RHOF_chr12_122217568_ENST00000537265_length(amino acids)=608AA_BP=554
MVNSPKKMEAEKDSGRRLRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKDFNYEYVQREALRVPLIFREKDGL
GIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWP
QHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVER
CQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSHLTQEY
QRESMLIDAPRKPSIDGFSSDSWLEMEEEACDQQPQEEEEKDEEGEGRDRAPKPPTDGSTSPTSTPSEDQEALGKKPKAPALRFLKRTLS
NESEESVKSTTLAVDYPKTPTGSPATEVSAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAI

--------------------------------------------------------------
>41752_41752_2_KDM2B-RHOF_KDM2B_chr12_121932382_ENST00000377069_RHOF_chr12_122231145_ENST00000267205_length(transcript)=4286nt_BP=2048nt
CCAACAACAAAACAGCGATGCCACGGCGCTAACGGCGCCCGGTGCCTCCCGGGCTCCCTCCCCGCCCCATACCTCCTCGGGCCGCCGCCC
CCACCCCCCCAAGCCCGGGCCGAGAGCCCCCCCAAATAGCCCGGCCGCGGGCTCCGAGCGCGATCGGCAACAATGTTTACGTTCCGGGGA
TTATGACGTCGACGCCTCCCCCCCCCCACAACTGCTGAAAATGGTTTCCTAGGACTTTGCAAACGGATCTGCCTAAGTGTTGGTGCAAAA
CTTTGTAGATCTCGGCTCTGGCTTGCTTTATTTATTTATTTTTTGGTTTGTTTTCTTTGGTCTTCCCTCCTTCCCCCCTCGGCCAAAATG
CAGGGGGCAGGAGTGTTGACAATTAATTGGTGAACTCTCCTAAAAAAATGGAGGCAGAGAAAGACTCTGGAAGAAGATTGCGCCCGATTG
ACCGCCAGCGATACGACGAGAACGAGGACTTGTCGGACGTGGAGGAGATCGTCAGCGTCCGCGGCTTCAGCCTGGAGGAGAAGCTTCGCA
GCCAGCTGTACCAGGGGGACTTCGTGCACGCCATGGAGGGCAAAGATTTCAACTATGAGTACGTACAGAGAGAAGCTCTCAGGGTTCCCC
TGATATTTCGAGAAAAGGATGGACTGGGAATTAAGATGCCTGACCCTGATTTCACAGTCCGAGACGTCAAACTCCTAGTGGGGAGCCGGC
GGCTTGTGGACGTGATGGATGTGAACACCCAGAAGGGCACGGAGATGAGCATGTCCCAGTTTGTGCGTTACTACGAGACGCCCGAGGCCC
AGCGGGACAAGCTGTACAACGTCATCAGCCTAGAGTTCAGCCACACCAAGCTGGAGCACTTGGTCAAGCGTCCGACTGTGGTAGACCTGG
TGGACTGGGTGGACAACATGTGGCCCCAGCATCTGAAGGAGAAGCAGACAGAAGCCACGAACGCCATTGCAGAGATGAAGTACCCGAAAG
TGAAAAAGTACTGTCTGATGAGCGTGAAAGGTTGTTTCACCGACTTCCACATCGACTTTGGAGGCACTTCCGTTTGGTACCATGTTTTCC
GGGGTGGGAAGATTTTTTGGCTGATTCCTCCAACGCTGCACAATTTGGCGCTGTACGAGGAGTGGGTGCTGTCAGGCAAACAGAGTGACA
TCTTTCTGGGAGACCGTGTGGAACGATGCCAAAGAATTGAGCTGAAGCAGGGCTACACATTTTTCATCCCTTCCGGTTGGATCCATGCCG
TCTACACCCCTGTAGACTCTTTGGTGTTCGGCGGAAACATCCTGCACAGCTTTAACGTGCCCATGCAGCTGCGGATCTACGAGATCGAGG
ACAGGACGCGGGTGCAGCCCAAATTCCGTTACCCCTTCTACTATGAGATGTGCTGGTATGTCCTGGAGAGATACGTGTACTGTGTGACCC
AGCGCTCCCACCTCACTCAGGAATACCAGAGGGAGTCGATGCTTATTGATGCCCCGAGGAAGCCCAGCATAGACGGCTTCTCTTCGGATT
CCTGGCTGGAGATGGAGGAGGAGGCCTGTGATCAGCAGCCTCAGGAGGAGGAGGAGAAGGACGAGGAGGGCGAGGGCAGGGACAGGGCAC
CCAAACCGCCCACCGATGGCTCCACTTCACCCACCAGCACGCCCTCTGAGGACCAGGAGGCCCTCGGGAAGAAGCCCAAAGCACCTGCCC
TGCGATTCCTCAAAAGGACTTTGTCTAATGAGTCGGAGGAAAGTGTGAAGTCCACCACATTGGCCGTAGACTACCCCAAGACCCCCACCG
GCTCTCCCGCCACGGAGGTCTCTGCCAAATGGACCCATCTCACTGAGTTTGAACTGAAGGGCCTGAAAGCTCTGGTGGAGAAACTGGAAT
CCCTCCCGGAGAACAAGAAGTGTGTCCCCGAGGGCATCGAGGACCCCCAGGCACTCCTGGAGGGTGTGAAGAACGTCCTGAAGGAGCACG
CAGATGATGACCCTAGTCTGGCCATCACTGGGGTCCCTGTGGTGACTTGGCCAAAGAAGACTCCAAAGCACTACGCCCCATCGGTGTTCG
AGAAGTACACGGCCAGCGTGACCGTTGGCAGCAAGGAGGTGACCCTGAACCTCTACGACACGGCCGGGCAAGAAGACTATGACCGGCTGC
GGCCCCTGTCCTACCAGAACACCCACCTCGTGCTCATCTGCTATGACGTCATGAATCCCACCAGCTACGACAACGTCCTCATCAAGTGGT
TCCCTGAGGTCACGCATTTCTGCCGCGGGATCCCCATGGTGCTCATCGGCTGCAAGACAGACCTGAGGAAGGACAAGGAGCAGCTGCGGA
AGCTCCGGGCCGCCCAGCTGGAGCCCATCACCTACATGCAGGGCCTGAGCGCCTGCGAACAGATCCGAGCTGCTCTCTACCTGGAATGTT
CCGCCAAGTTTCGGGAGAATGTGGAGGACGTCTTCCGGGAGGCCGCCAAGGTGGCTCTCAGCGCTCTGAAGAAGGCGCAACGGCAGAAGA
AGCGCCGGCTCTGCCTGCTGCTCTGACCCAGGGCAGACAGACCTCACGACAGCACTGACAGGGCCCGGGGGCCCAGGTGCCGATTGCACC
AGGGAGGCTGCCCCATCCCGACCCTCCAGCTCATGGTGTCTGGGGCCTGCGGCTAGACTCTTGGAACATTCTGGAACTCTCTCCTTTCCT
GGCTGGGGCTCTGACCACAAACTCCCCTCCAGGCTGCCCCTGGGACATGGTGGTGATGTGGGTGCAGGAGCCAGTGTCTGTTGTCGGGAC
TCGCAAGTGCCCTCATCACAGCCACCCCCACCACGAGTGTCTCCCCAGTGCAGACTCAAGTTATGCTTGAAATGAAAAAGTCTATCTGGT
AGTGGGTAAACGTAGACCTGGCACTGTTCCACGCGGGCGCCCCAAGCCTGCCACTCCTGTGTCCCTGCCTCCCTGGGCTCCCGAGATAGG
CACCACTGTATCCTCCAGCTCCTTCCTTCCTTCCCCCAGGAACACGGAGGCCACCGAGGGGGCTGGGCCTATCAGGAGGACACAGGCTGC
AGCCTGGCACCCACCCCTCCCATCTCCACCCCACATGGAAGACTTGTCTTCAACTTGGCCACTGTCTTTGCAGAGCTGGGCACATGTGCC
CAGGGGGCAGAAAAAATGGCTTCTCAGTTGTTAAAAGTATACCCTGGACCACCCATCTGACCATCTCCTTAAGGTTTCACCCAAAGCCCC
CAGTGTCAGAGACTTGGGATGGGAAGAACAGTCGGCTCCCAGTGTGGTCATGAGCAAGTTTTCTGTGGACTGTTCCCCCCACTGTGGTAG
GACAGGACTGGCCCACTTAGTCCTCAAGCTCCCAACCTGCTGTCCCTCAAGCCCCGCTTCTACCAGCCTGTGGAGTTCAGGAGGCGAGAC
ATCCTGGCCTCCTTTGAGAACTGATGGGATCTACCCCCTGTCCACGCGGGACAGTTTCTCAGAACTGGTTCATAGACCACCTGTGTCACC
AACAGCCAGATACCTAATCCCTGAGCCTCCTTTGGGAAGGTCTGGGGCCGAGGGTCTGGGAATTTTTTTTTTTTTTTTTTTTTGGGACAG
AGTCTCATTCTGTCACTCAGGCTAGAGTGCAGTGGCATGATCTTGGCTCACTGCAAGCTCCACCTCCTGGGTTCAAGCGATTCTCTTGCC
TCAGCCTCCTGAGTAGCTGGGACTACATGCGCACACCACCACGTCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTT
GGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCACCCGCCTTAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCG
GCCCAGGACTTTTAAAACAAGCATCCCAGGGGATTCCGGTGCCTACCAGAAGTCGCAAGCTGCTTGGCTCTGGAGGGCGCCTAGGAGTCG
GTGTCGCCTAAGATGGGATAATGGCTTCAGGCAACTCCTAGCCTTCCCCATATCTCCTGCCTCAGCCCCCCTGGCCCAGTGCTGGGGCGT
CAGCTAAACCTGAGCTTCCAAGAAGTCAGGTTGCCAAAGGAAGGAGCCTTCTGAGACCCTCCCCAACCCACCCAGGTTCCCAAGGCCCTG
CCGTACCCTGGGGAATCAACCAAGGAGTTCTTGTTCTCGAAGAACCCCAGGCCTCATGATGGTCTACGGTAGAGGTCCAACAACTACAGC

>41752_41752_2_KDM2B-RHOF_KDM2B_chr12_121932382_ENST00000377069_RHOF_chr12_122231145_ENST00000267205_length(amino acids)=719AA_BP=552
MVNSPKKMEAEKDSGRRLRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKDFNYEYVQREALRVPLIFREKDGL
GIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWP
QHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVER
CQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSHLTQEY
QRESMLIDAPRKPSIDGFSSDSWLEMEEEACDQQPQEEEEKDEEGEGRDRAPKPPTDGSTSPTSTPSEDQEALGKKPKAPALRFLKRTLS
NESEESVKSTTLAVDYPKTPTGSPATEVSAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAI
TGVPVVTWPKKTPKHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCR

--------------------------------------------------------------
>41752_41752_3_KDM2B-RHOF_KDM2B_chr12_121932382_ENST00000377071_RHOF_chr12_122217568_ENST00000537265_length(transcript)=2052nt_BP=1807nt
AAAAGTTAGGCAGTCCTTATAGGTATGGAAGCCGAGCTAATTTCCTTCTGAGCCCCCCAAATGCCTCCTCCACATGGCGGGTCCGCAAAT
GGGGGGATCTGCAGAGGATCACCCCCCACGAAAAAGACATGCAGCAGAAAAGCAAAAAAAGAAAACAGTTATATATACAAAATGCTTTGA
ATTTGAGTCGGCCACACAGCGCCCGATTGACCGCCAGCGATACGACGAGAACGAGGACTTGTCGGACGTGGAGGAGATCGTCAGCGTCCG
CGGCTTCAGCCTGGAGGAGAAGCTTCGCAGCCAGCTGTACCAGGGGGACTTCGTGCACGCCATGGAGGGCAAAGATTTCAACTATGAGTA
CGTACAGAGAGAAGCTCTCAGGGTTCCCCTGATATTTCGAGAAAAGGATGGACTGGGAATTAAGATGCCTGACCCTGATTTCACAGTCCG
AGACGTCAAACTCCTAGTGGGGAGCCGGCGGCTTGTGGACGTGATGGATGTGAACACCCAGAAGGGCACGGAGATGAGCATGTCCCAGTT
TGTGCGTTACTACGAGACGCCCGAGGCCCAGCGGGACAAGCTGTACAACGTCATCAGCCTAGAGTTCAGCCACACCAAGCTGGAGCACTT
GGTCAAGCGTCCGACTGTGGTAGACCTGGTGGACTGGGTGGACAACATGTGGCCCCAGCATCTGAAGGAGAAGCAGACAGAAGCCACGAA
CGCCATTGCAGAGATGAAGTACCCGAAAGTGAAAAAGTACTGTCTGATGAGCGTGAAAGGTTGTTTCACCGACTTCCACATCGACTTTGG
AGGCACTTCCGTTTGGTACCATGTTTTCCGGGGTGGGAAGATTTTTTGGCTGATTCCTCCAACGCTGCACAATTTGGCGCTGTACGAGGA
GTGGGTGCTGTCAGGCAAACAGAGTGACATCTTTCTGGGAGACCGTGTGGAACGATGCCAAAGAATTGAGCTGAAGCAGGGCTACACATT
TTTCATCCCTTCCGGTTGGATCCATGCCGTCTACACCCCTGTAGACTCTTTGGTGTTCGGCGGAAACATCCTGCACAGCTTTAACGTGCC
CATGCAGCTGCGGATCTACGAGATCGAGGACAGGACGCGGGTGCAGCCCAAATTCCGTTACCCCTTCTACTATGAGATGTGCTGGTATGT
CCTGGAGAGATACGTGTACTGTGTGACCCAGCGCTCCCACCTCACTCAGGAATACCAGAGGGAGTCGATGCTTATTGATGCCCCGAGGAA
GCCCAGCATAGACGGCTTCTCTTCGGATTCCTGGCTGGAGATGGAGGAGGAGGCCTGTGATCAGCAGCCTCAGGAGGAGGAGGAGAAGGA
CGAGGAGGGCGAGGGCAGGGACAGGGCACCCAAACCGCCCACCGATGGCTCCACTTCACCCACCAGCACGCCCTCTGAGGACCAGGAGGC
CCTCGGGAAGAAGCCCAAAGCACCTGCCCTGCGATTCCTCAAAAGGACTTTGTCTAATGAGTCGGAGGAAAGTGTGAAGTCCACCACATT
GGCCGTAGACTACCCCAAGACCCCCACCGGCTCTCCCGCCACGGAGGTCTCTGCCAAATGGACCCATCTCACTGAGTTTGAACTGAAGGG
CCTGAAAGCTCTGGTGGAGAAACTGGAATCCCTCCCGGAGAACAAGAAGTGTGTCCCCGAGGGCATCGAGGACCCCCAGGCACTCCTGGA
GGGTGTGAAGAACGTCCTGAAGGAGCACGCAGATGATGACCCTAGTCTGGCCATCACTGGGGTCCCTGTGGTGACTTGGCCAAAGAAGAC
TCCAAAGGGCCTGAGCGCCTGCGAACAGATCCGAGCTGCTCTCTACCTGGAATGTTCCGCCAAGTTTCGGGAGAATGTGGAGGACGTCTT
CCGGGAGGCCGCCAAGGTGGCTCTCAGCGCTCTGAAGAAGGCGCAACGGCAGAAGAAGCGCCGGCTCTGCCTGCTGCTCTGACCCAGGGC

>41752_41752_3_KDM2B-RHOF_KDM2B_chr12_121932382_ENST00000377071_RHOF_chr12_122217568_ENST00000537265_length(amino acids)=632AA_BP=578
MAGPQMGGSAEDHPPRKRHAAEKQKKKTVIYTKCFEFESATQRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGK
DFNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSH
TKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHN
LALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYY
EMCWYVLERYVYCVTQRSHLTQEYQRESMLIDAPRKPSIDGFSSDSWLEMEEEACDQQPQEEEEKDEEGEGRDRAPKPPTDGSTSPTSTP
SEDQEALGKKPKAPALRFLKRTLSNESEESVKSTTLAVDYPKTPTGSPATEVSAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIED
PQALLEGVKNVLKEHADDDPSLAITGVPVVTWPKKTPKGLSACEQIRAALYLECSAKFRENVEDVFREAAKVALSALKKAQRQKKRRLCL

--------------------------------------------------------------
>41752_41752_4_KDM2B-RHOF_KDM2B_chr12_121932382_ENST00000377071_RHOF_chr12_122231145_ENST00000267205_length(transcript)=4045nt_BP=1807nt
AAAAGTTAGGCAGTCCTTATAGGTATGGAAGCCGAGCTAATTTCCTTCTGAGCCCCCCAAATGCCTCCTCCACATGGCGGGTCCGCAAAT
GGGGGGATCTGCAGAGGATCACCCCCCACGAAAAAGACATGCAGCAGAAAAGCAAAAAAAGAAAACAGTTATATATACAAAATGCTTTGA
ATTTGAGTCGGCCACACAGCGCCCGATTGACCGCCAGCGATACGACGAGAACGAGGACTTGTCGGACGTGGAGGAGATCGTCAGCGTCCG
CGGCTTCAGCCTGGAGGAGAAGCTTCGCAGCCAGCTGTACCAGGGGGACTTCGTGCACGCCATGGAGGGCAAAGATTTCAACTATGAGTA
CGTACAGAGAGAAGCTCTCAGGGTTCCCCTGATATTTCGAGAAAAGGATGGACTGGGAATTAAGATGCCTGACCCTGATTTCACAGTCCG
AGACGTCAAACTCCTAGTGGGGAGCCGGCGGCTTGTGGACGTGATGGATGTGAACACCCAGAAGGGCACGGAGATGAGCATGTCCCAGTT
TGTGCGTTACTACGAGACGCCCGAGGCCCAGCGGGACAAGCTGTACAACGTCATCAGCCTAGAGTTCAGCCACACCAAGCTGGAGCACTT
GGTCAAGCGTCCGACTGTGGTAGACCTGGTGGACTGGGTGGACAACATGTGGCCCCAGCATCTGAAGGAGAAGCAGACAGAAGCCACGAA
CGCCATTGCAGAGATGAAGTACCCGAAAGTGAAAAAGTACTGTCTGATGAGCGTGAAAGGTTGTTTCACCGACTTCCACATCGACTTTGG
AGGCACTTCCGTTTGGTACCATGTTTTCCGGGGTGGGAAGATTTTTTGGCTGATTCCTCCAACGCTGCACAATTTGGCGCTGTACGAGGA
GTGGGTGCTGTCAGGCAAACAGAGTGACATCTTTCTGGGAGACCGTGTGGAACGATGCCAAAGAATTGAGCTGAAGCAGGGCTACACATT
TTTCATCCCTTCCGGTTGGATCCATGCCGTCTACACCCCTGTAGACTCTTTGGTGTTCGGCGGAAACATCCTGCACAGCTTTAACGTGCC
CATGCAGCTGCGGATCTACGAGATCGAGGACAGGACGCGGGTGCAGCCCAAATTCCGTTACCCCTTCTACTATGAGATGTGCTGGTATGT
CCTGGAGAGATACGTGTACTGTGTGACCCAGCGCTCCCACCTCACTCAGGAATACCAGAGGGAGTCGATGCTTATTGATGCCCCGAGGAA
GCCCAGCATAGACGGCTTCTCTTCGGATTCCTGGCTGGAGATGGAGGAGGAGGCCTGTGATCAGCAGCCTCAGGAGGAGGAGGAGAAGGA
CGAGGAGGGCGAGGGCAGGGACAGGGCACCCAAACCGCCCACCGATGGCTCCACTTCACCCACCAGCACGCCCTCTGAGGACCAGGAGGC
CCTCGGGAAGAAGCCCAAAGCACCTGCCCTGCGATTCCTCAAAAGGACTTTGTCTAATGAGTCGGAGGAAAGTGTGAAGTCCACCACATT
GGCCGTAGACTACCCCAAGACCCCCACCGGCTCTCCCGCCACGGAGGTCTCTGCCAAATGGACCCATCTCACTGAGTTTGAACTGAAGGG
CCTGAAAGCTCTGGTGGAGAAACTGGAATCCCTCCCGGAGAACAAGAAGTGTGTCCCCGAGGGCATCGAGGACCCCCAGGCACTCCTGGA
GGGTGTGAAGAACGTCCTGAAGGAGCACGCAGATGATGACCCTAGTCTGGCCATCACTGGGGTCCCTGTGGTGACTTGGCCAAAGAAGAC
TCCAAAGCACTACGCCCCATCGGTGTTCGAGAAGTACACGGCCAGCGTGACCGTTGGCAGCAAGGAGGTGACCCTGAACCTCTACGACAC
GGCCGGGCAAGAAGACTATGACCGGCTGCGGCCCCTGTCCTACCAGAACACCCACCTCGTGCTCATCTGCTATGACGTCATGAATCCCAC
CAGCTACGACAACGTCCTCATCAAGTGGTTCCCTGAGGTCACGCATTTCTGCCGCGGGATCCCCATGGTGCTCATCGGCTGCAAGACAGA
CCTGAGGAAGGACAAGGAGCAGCTGCGGAAGCTCCGGGCCGCCCAGCTGGAGCCCATCACCTACATGCAGGGCCTGAGCGCCTGCGAACA
GATCCGAGCTGCTCTCTACCTGGAATGTTCCGCCAAGTTTCGGGAGAATGTGGAGGACGTCTTCCGGGAGGCCGCCAAGGTGGCTCTCAG
CGCTCTGAAGAAGGCGCAACGGCAGAAGAAGCGCCGGCTCTGCCTGCTGCTCTGACCCAGGGCAGACAGACCTCACGACAGCACTGACAG
GGCCCGGGGGCCCAGGTGCCGATTGCACCAGGGAGGCTGCCCCATCCCGACCCTCCAGCTCATGGTGTCTGGGGCCTGCGGCTAGACTCT
TGGAACATTCTGGAACTCTCTCCTTTCCTGGCTGGGGCTCTGACCACAAACTCCCCTCCAGGCTGCCCCTGGGACATGGTGGTGATGTGG
GTGCAGGAGCCAGTGTCTGTTGTCGGGACTCGCAAGTGCCCTCATCACAGCCACCCCCACCACGAGTGTCTCCCCAGTGCAGACTCAAGT
TATGCTTGAAATGAAAAAGTCTATCTGGTAGTGGGTAAACGTAGACCTGGCACTGTTCCACGCGGGCGCCCCAAGCCTGCCACTCCTGTG
TCCCTGCCTCCCTGGGCTCCCGAGATAGGCACCACTGTATCCTCCAGCTCCTTCCTTCCTTCCCCCAGGAACACGGAGGCCACCGAGGGG
GCTGGGCCTATCAGGAGGACACAGGCTGCAGCCTGGCACCCACCCCTCCCATCTCCACCCCACATGGAAGACTTGTCTTCAACTTGGCCA
CTGTCTTTGCAGAGCTGGGCACATGTGCCCAGGGGGCAGAAAAAATGGCTTCTCAGTTGTTAAAAGTATACCCTGGACCACCCATCTGAC
CATCTCCTTAAGGTTTCACCCAAAGCCCCCAGTGTCAGAGACTTGGGATGGGAAGAACAGTCGGCTCCCAGTGTGGTCATGAGCAAGTTT
TCTGTGGACTGTTCCCCCCACTGTGGTAGGACAGGACTGGCCCACTTAGTCCTCAAGCTCCCAACCTGCTGTCCCTCAAGCCCCGCTTCT
ACCAGCCTGTGGAGTTCAGGAGGCGAGACATCCTGGCCTCCTTTGAGAACTGATGGGATCTACCCCCTGTCCACGCGGGACAGTTTCTCA
GAACTGGTTCATAGACCACCTGTGTCACCAACAGCCAGATACCTAATCCCTGAGCCTCCTTTGGGAAGGTCTGGGGCCGAGGGTCTGGGA
ATTTTTTTTTTTTTTTTTTTTTGGGACAGAGTCTCATTCTGTCACTCAGGCTAGAGTGCAGTGGCATGATCTTGGCTCACTGCAAGCTCC
ACCTCCTGGGTTCAAGCGATTCTCTTGCCTCAGCCTCCTGAGTAGCTGGGACTACATGCGCACACCACCACGTCCGGCTAATTTTTGTAT
TTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCACCCGCCTTAGCCTCCCAAAGTGCT
GGGATTACAGGCGTGAGCCACCGTGCCCGGCCCAGGACTTTTAAAACAAGCATCCCAGGGGATTCCGGTGCCTACCAGAAGTCGCAAGCT
GCTTGGCTCTGGAGGGCGCCTAGGAGTCGGTGTCGCCTAAGATGGGATAATGGCTTCAGGCAACTCCTAGCCTTCCCCATATCTCCTGCC
TCAGCCCCCCTGGCCCAGTGCTGGGGCGTCAGCTAAACCTGAGCTTCCAAGAAGTCAGGTTGCCAAAGGAAGGAGCCTTCTGAGACCCTC
CCCAACCCACCCAGGTTCCCAAGGCCCTGCCGTACCCTGGGGAATCAACCAAGGAGTTCTTGTTCTCGAAGAACCCCAGGCCTCATGATG

>41752_41752_4_KDM2B-RHOF_KDM2B_chr12_121932382_ENST00000377071_RHOF_chr12_122231145_ENST00000267205_length(amino acids)=743AA_BP=576
MAGPQMGGSAEDHPPRKRHAAEKQKKKTVIYTKCFEFESATQRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGK
DFNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSH
TKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHN
LALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYY
EMCWYVLERYVYCVTQRSHLTQEYQRESMLIDAPRKPSIDGFSSDSWLEMEEEACDQQPQEEEEKDEEGEGRDRAPKPPTDGSTSPTSTP
SEDQEALGKKPKAPALRFLKRTLSNESEESVKSTTLAVDYPKTPTGSPATEVSAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIED
PQALLEGVKNVLKEHADDDPSLAITGVPVVTWPKKTPKHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICY
DVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYMQGLSACEQIRAALYLECSAKFRENVEDVFREA

--------------------------------------------------------------
>41752_41752_5_KDM2B-RHOF_KDM2B_chr12_121932382_ENST00000536437_RHOF_chr12_122217568_ENST00000267205_length(transcript)=3603nt_BP=1698nt
GCCGAGCTAATTTCCTTCTGAGCCCCCCAAATGCCTCCTCCACATGGCGGGTCCGCAAATGGGGGGATCTGCAGAGGATCACCCCCCACG
AAAAAGACATGCAGCAGAAAAGCAAAAAAAGAAAACAGTTATATATACAAAATGCTTTGAATTTGAGTCGGCCACACAGCGCCCGATTGA
CCGCCAGCGATACGACGAGAACGAGGACTTGTCGGACGTGGAGGAGATCGTCAGCGTCCGCGGCTTCAGCCTGGAGGAGAAGCTTCGCAG
CCAGCTGTACCAGGGGGACTTCGTGCACGCCATGGAGGGCAAAGGATGCCTGACCCTGATTTCACAGTCCGAGACGTCAAACTCCTAGTG
GGGAGCCGGCGGCTTGTGGACGTGATGGATGTGAACACCCAGAAGGGCACGGAGATGAGCATGTCCCAGTTTGTGCGTTACTACGAGACG
CCCGAGGCCCAGCGGGACAAGCTGTACAACGTCATCAGCCTAGAGTTCAGCCACACCAAGCTGGAGCACTTGGTCAAGCGTCCGACTGTG
GTAGACCTGGTGGACTGGGTGGACAACATGTGGCCCCAGCATCTGAAGGAGAAGCAGACAGAAGCCACGAACGCCATTGCAGAGATGAAG
TACCCGAAAGTGAAAAAGTACTGTCTGATGAGCGTGAAAGGTTGTTTCACCGACTTCCACATCGACTTTGGAGGCACTTCCGTTTGGTAC
CATGTTTTCCGGGGTGGGAAGATTTTTTGGCTGATTCCTCCAACGCTGCACAATTTGGCGCTGTACGAGGAGTGGGTGCTGTCAGGCAAA
CAGAGTGACATCTTTCTGGGAGACCGTGTGGAACGATGCCAAAGAATTGAGCTGAAGCAGGGCTACACATTTTTCATCCCTTCCGGTTGG
ATCCATGCCGTCTACACCCCTGTAGACTCTTTGGTGTTCGGCGGAAACATCCTGCACAGCTTTAACGTGCCCATGCAGCTGCGGATCTAC
GAGATCGAGGACAGGACGCGGGTGCAGCCCAAATTCCGTTACCCCTTCTACTATGAGATGTGCTGGTATGTCCTGGAGAGATACGTGTAC
TGTGTGACCCAGCGCTCCCACCTCACTCAGGAATACCAGAGGGAGTCGATGCTTATTGATGCCCCGAGGAAGCCCAGCATAGACGGCTTC
TCTTCGGATTCCTGGCTGGAGATGGAGGAGGAGGCCTGTGATCAGCAGCCTCAGGAGGAGGAGGAGAAGGACGAGGAGGGCGAGGGCAGG
GACAGGGCACCCAAACCGCCCACCGATGGCTCCACTTCACCCACCAGCACGCCCTCTGAGGACCAGGAGGCCCTCGGGAAGAAGCCCAAA
GCACCTGCCCTGCGATTCCTCAAAAGGACTTTGTCTAATGAGTCGGAGGAAAGTGTGAAGTCCACCACATTGGCCGTAGACTACCCCAAG
ACCCCCACCGGCTCTCCCGCCACGGAGGTCTCTGCCAAATGGACCCATCTCACTGAGTTTGAACTGAAGGGCCTGAAAGCTCTGGTGGAG
AAACTGGAATCCCTCCCGGAGAACAAGAAGTGTGTCCCCGAGGGCATCGAGGACCCCCAGGCACTCCTGGAGGGTGTGAAGAACGTCCTG
AAGGAGCACGCAGATGATGACCCTAGTCTGGCCATCACTGGGGTCCCTGTGGTGACTTGGCCAAAGAAGACTCCAAAGGGCCTGAGCGCC
TGCGAACAGATCCGAGCTGCTCTCTACCTGGAATGTTCCGCCAAGTTTCGGGAGAATGTGGAGGACGTCTTCCGGGAGGCCGCCAAGGTG
GCTCTCAGCGCTCTGAAGAAGGCGCAACGGCAGAAGAAGCGCCGGCTCTGCCTGCTGCTCTGACCCAGGGCAGACAGACCTCACGACAGC
ACTGACAGGGCCCGGGGGCCCAGGTGCCGATTGCACCAGGGAGGCTGCCCCATCCCGACCCTCCAGCTCATGGTGTCTGGGGCCTGCGGC
TAGACTCTTGGAACATTCTGGAACTCTCTCCTTTCCTGGCTGGGGCTCTGACCACAAACTCCCCTCCAGGCTGCCCCTGGGACATGGTGG
TGATGTGGGTGCAGGAGCCAGTGTCTGTTGTCGGGACTCGCAAGTGCCCTCATCACAGCCACCCCCACCACGAGTGTCTCCCCAGTGCAG
ACTCAAGTTATGCTTGAAATGAAAAAGTCTATCTGGTAGTGGGTAAACGTAGACCTGGCACTGTTCCACGCGGGCGCCCCAAGCCTGCCA
CTCCTGTGTCCCTGCCTCCCTGGGCTCCCGAGATAGGCACCACTGTATCCTCCAGCTCCTTCCTTCCTTCCCCCAGGAACACGGAGGCCA
CCGAGGGGGCTGGGCCTATCAGGAGGACACAGGCTGCAGCCTGGCACCCACCCCTCCCATCTCCACCCCACATGGAAGACTTGTCTTCAA
CTTGGCCACTGTCTTTGCAGAGCTGGGCACATGTGCCCAGGGGGCAGAAAAAATGGCTTCTCAGTTGTTAAAAGTATACCCTGGACCACC
CATCTGACCATCTCCTTAAGGTTTCACCCAAAGCCCCCAGTGTCAGAGACTTGGGATGGGAAGAACAGTCGGCTCCCAGTGTGGTCATGA
GCAAGTTTTCTGTGGACTGTTCCCCCCACTGTGGTAGGACAGGACTGGCCCACTTAGTCCTCAAGCTCCCAACCTGCTGTCCCTCAAGCC
CCGCTTCTACCAGCCTGTGGAGTTCAGGAGGCGAGACATCCTGGCCTCCTTTGAGAACTGATGGGATCTACCCCCTGTCCACGCGGGACA
GTTTCTCAGAACTGGTTCATAGACCACCTGTGTCACCAACAGCCAGATACCTAATCCCTGAGCCTCCTTTGGGAAGGTCTGGGGCCGAGG
GTCTGGGAATTTTTTTTTTTTTTTTTTTTTGGGACAGAGTCTCATTCTGTCACTCAGGCTAGAGTGCAGTGGCATGATCTTGGCTCACTG
CAAGCTCCACCTCCTGGGTTCAAGCGATTCTCTTGCCTCAGCCTCCTGAGTAGCTGGGACTACATGCGCACACCACCACGTCCGGCTAAT
TTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCACCCGCCTTAGCCTCCC
AAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCCCAGGACTTTTAAAACAAGCATCCCAGGGGATTCCGGTGCCTACCAGAAGT
CGCAAGCTGCTTGGCTCTGGAGGGCGCCTAGGAGTCGGTGTCGCCTAAGATGGGATAATGGCTTCAGGCAACTCCTAGCCTTCCCCATAT
CTCCTGCCTCAGCCCCCCTGGCCCAGTGCTGGGGCGTCAGCTAAACCTGAGCTTCCAAGAAGTCAGGTTGCCAAAGGAAGGAGCCTTCTG
AGACCCTCCCCAACCCACCCAGGTTCCCAAGGCCCTGCCGTACCCTGGGGAATCAACCAAGGAGTTCTTGTTCTCGAAGAACCCCAGGCC
TCATGATGGTCTACGGTAGAGGTCCAACAACTACAGCCTGTGGGCCACATCTGGCCACAGCCTGATTTGTAAATAAAGTTTTATTGGAAC

>41752_41752_5_KDM2B-RHOF_KDM2B_chr12_121932382_ENST00000536437_RHOF_chr12_122217568_ENST00000267205_length(amino acids)=515AA_BP=461
MPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHL
KEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQR
IELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSHLTQEYQRE
SMLIDAPRKPSIDGFSSDSWLEMEEEACDQQPQEEEEKDEEGEGRDRAPKPPTDGSTSPTSTPSEDQEALGKKPKAPALRFLKRTLSNES
EESVKSTTLAVDYPKTPTGSPATEVSAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAITGV

--------------------------------------------------------------

Top

Fusion Gene PPI Analysis for KDM2B-RHOF


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

Related Drugs for KDM2B-RHOF


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

Related Diseases for KDM2B-RHOF


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneKDM2BC0036341Schizophrenia1CTD_human