Fusion Gene Studies
in Kim Lab

FusionBase FusionGDB FusionGDB2 FusionPDB FusionNeoAntigen FusionAI FusionNW FGviewer Publication Contact
FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
leaf

Fusion Gene Summary

leaf

Fusion Gene ORF analysis

leaf

Fusion Genomic Features

leaf

Fusion Protein Features

leaf

Fusion Gene Sequence

leaf

Fusion Gene PPI analysis

leaf

Related Drugs

leaf

Related Diseases

Fusion gene:CDK13-POU6F2 (FusionGDB2 ID:HG8621TG11281)

Fusion Gene Summary for CDK13-POU6F2

check button Fusion gene summary
Fusion gene informationFusion gene name: CDK13-POU6F2
Fusion gene ID: hg8621tg11281
HgeneTgene
Gene symbol

CDK13

POU6F2

Gene ID

8621

11281

Gene namecyclin dependent kinase 13POU class 6 homeobox 2
SynonymsCDC2L|CDC2L5|CHDFIDD|CHED|hCDK13RPF-1|WT5|WTSL
Cytomap('CDK13')('POU6F2')

7p14.1

7p14.1

Type of geneprotein-codingprotein-coding
Descriptioncyclin-dependent kinase 13CDC2-related protein kinase 5cell division cycle 2-like protein kinase 5cell division protein kinase 13cholinesterase-related cell division controllerPOU domain, class 6, transcription factor 2Wilms tumor suppressor locusretina-derived POU-domain factor-1
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000484589, ENST00000181839, 
ENST00000340829, 
Fusion gene scores* DoF score16 X 14 X 13=29127 X 9 X 9=567
# samples 3112
** MAII scorelog2(31/2912*10)=-3.23167023492446
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(12/567*10)=-2.24031432933371
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: CDK13 [Title/Abstract] AND POU6F2 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointCDK13(40041630)-POU6F2(39500146), # samples:2
CDK13(40118450)-POU6F2(39379241), # samples:2
Anticipated loss of major functional domain due to fusion event.CDK13-POU6F2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
CDK13-POU6F2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
CDK13-POU6F2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
CDK13-POU6F2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
CDK13-POU6F2 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
CDK13-POU6F2 seems lost the major protein functional domain in Hgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
CDK13-POU6F2 seems lost the major protein functional domain in Hgene partner, which is a kinase due to the frame-shifted ORF.
CDK13-POU6F2 seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF.
CDK13-POU6F2 seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneCDK13

GO:0070816

phosphorylation of RNA polymerase II C-terminal domain

20952539


check buttonFusion gene breakpoints across CDK13 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure
check buttonFusion gene breakpoints across POU6F2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4ESCATCGA-LN-A8I0-01ACDK13chr7

40041630

+POU6F2chr7

39472676

+
ChimerDB4OVTCGA-13-0890-01ACDK13chr7

39991451

+POU6F2chr7

39472676

+
ChimerDB4OVTCGA-13-0890CDK13chr7

39991451

+POU6F2chr7

39446198

+
ChimerDB4OVTCGA-13-0890CDK13chr7

39991451

+POU6F2chr7

39472675

+
ChimerDB4OVTCGA-61-1724-01ACDK13chr7

40041630

+POU6F2chr7

39500146

+
ChimerDB4STADTCGA-BR-7716-01ACDK13chr7

40118450

+POU6F2chr7

39379241

+


Top

Fusion Gene ORF analysis for CDK13-POU6F2

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
3UTR-3CDSENST00000484589ENST00000403058CDK13chr7

40041630

+POU6F2chr7

39472676

+
3UTR-3CDSENST00000484589ENST00000403058CDK13chr7

40041630

+POU6F2chr7

39500146

+
3UTR-3CDSENST00000484589ENST00000518318CDK13chr7

40041630

+POU6F2chr7

39472676

+
3UTR-3CDSENST00000484589ENST00000518318CDK13chr7

40041630

+POU6F2chr7

39500146

+
3UTR-intronENST00000484589ENST00000464276CDK13chr7

40041630

+POU6F2chr7

39472676

+
3UTR-intronENST00000484589ENST00000464276CDK13chr7

40041630

+POU6F2chr7

39500146

+
3UTR-intronENST00000484589ENST00000517348CDK13chr7

40041630

+POU6F2chr7

39472676

+
3UTR-intronENST00000484589ENST00000517348CDK13chr7

40041630

+POU6F2chr7

39500146

+
3UTR-intronENST00000484589ENST00000559001CDK13chr7

40041630

+POU6F2chr7

39472676

+
3UTR-intronENST00000484589ENST00000559001CDK13chr7

40041630

+POU6F2chr7

39500146

+
5CDS-3UTRENST00000181839ENST00000517348CDK13chr7

40118450

+POU6F2chr7

39379241

+
5CDS-3UTRENST00000181839ENST00000559001CDK13chr7

40118450

+POU6F2chr7

39379241

+
5CDS-3UTRENST00000340829ENST00000517348CDK13chr7

40118450

+POU6F2chr7

39379241

+
5CDS-3UTRENST00000340829ENST00000559001CDK13chr7

40118450

+POU6F2chr7

39379241

+
5CDS-intronENST00000181839ENST00000464276CDK13chr7

40041630

+POU6F2chr7

39472676

+
5CDS-intronENST00000181839ENST00000464276CDK13chr7

39991451

+POU6F2chr7

39472676

+
5CDS-intronENST00000181839ENST00000464276CDK13chr7

39991451

+POU6F2chr7

39446198

+
5CDS-intronENST00000181839ENST00000464276CDK13chr7

39991451

+POU6F2chr7

39472675

+
5CDS-intronENST00000181839ENST00000464276CDK13chr7

40041630

+POU6F2chr7

39500146

+
5CDS-intronENST00000181839ENST00000464276CDK13chr7

40118450

+POU6F2chr7

39379241

+
5CDS-intronENST00000181839ENST00000517348CDK13chr7

40041630

+POU6F2chr7

39472676

+
5CDS-intronENST00000181839ENST00000517348CDK13chr7

39991451

+POU6F2chr7

39472676

+
5CDS-intronENST00000181839ENST00000517348CDK13chr7

39991451

+POU6F2chr7

39446198

+
5CDS-intronENST00000181839ENST00000517348CDK13chr7

39991451

+POU6F2chr7

39472675

+
5CDS-intronENST00000181839ENST00000517348CDK13chr7

40041630

+POU6F2chr7

39500146

+
5CDS-intronENST00000181839ENST00000559001CDK13chr7

40041630

+POU6F2chr7

39472676

+
5CDS-intronENST00000181839ENST00000559001CDK13chr7

39991451

+POU6F2chr7

39472676

+
5CDS-intronENST00000181839ENST00000559001CDK13chr7

39991451

+POU6F2chr7

39446198

+
5CDS-intronENST00000181839ENST00000559001CDK13chr7

39991451

+POU6F2chr7

39472675

+
5CDS-intronENST00000181839ENST00000559001CDK13chr7

40041630

+POU6F2chr7

39500146

+
5CDS-intronENST00000340829ENST00000464276CDK13chr7

40041630

+POU6F2chr7

39472676

+
5CDS-intronENST00000340829ENST00000464276CDK13chr7

39991451

+POU6F2chr7

39472676

+
5CDS-intronENST00000340829ENST00000464276CDK13chr7

39991451

+POU6F2chr7

39446198

+
5CDS-intronENST00000340829ENST00000464276CDK13chr7

39991451

+POU6F2chr7

39472675

+
5CDS-intronENST00000340829ENST00000464276CDK13chr7

40041630

+POU6F2chr7

39500146

+
5CDS-intronENST00000340829ENST00000464276CDK13chr7

40118450

+POU6F2chr7

39379241

+
5CDS-intronENST00000340829ENST00000517348CDK13chr7

40041630

+POU6F2chr7

39472676

+
5CDS-intronENST00000340829ENST00000517348CDK13chr7

39991451

+POU6F2chr7

39472676

+
5CDS-intronENST00000340829ENST00000517348CDK13chr7

39991451

+POU6F2chr7

39446198

+
5CDS-intronENST00000340829ENST00000517348CDK13chr7

39991451

+POU6F2chr7

39472675

+
5CDS-intronENST00000340829ENST00000517348CDK13chr7

40041630

+POU6F2chr7

39500146

+
5CDS-intronENST00000340829ENST00000559001CDK13chr7

40041630

+POU6F2chr7

39472676

+
5CDS-intronENST00000340829ENST00000559001CDK13chr7

39991451

+POU6F2chr7

39472676

+
5CDS-intronENST00000340829ENST00000559001CDK13chr7

39991451

+POU6F2chr7

39446198

+
5CDS-intronENST00000340829ENST00000559001CDK13chr7

39991451

+POU6F2chr7

39472675

+
5CDS-intronENST00000340829ENST00000559001CDK13chr7

40041630

+POU6F2chr7

39500146

+
Frame-shiftENST00000181839ENST00000403058CDK13chr7

40041630

+POU6F2chr7

39472676

+
Frame-shiftENST00000181839ENST00000403058CDK13chr7

39991451

+POU6F2chr7

39472676

+
Frame-shiftENST00000181839ENST00000403058CDK13chr7

39991451

+POU6F2chr7

39446198

+
Frame-shiftENST00000181839ENST00000403058CDK13chr7

39991451

+POU6F2chr7

39472675

+
Frame-shiftENST00000181839ENST00000403058CDK13chr7

40118450

+POU6F2chr7

39379241

+
Frame-shiftENST00000181839ENST00000518318CDK13chr7

40041630

+POU6F2chr7

39472676

+
Frame-shiftENST00000181839ENST00000518318CDK13chr7

39991451

+POU6F2chr7

39472676

+
Frame-shiftENST00000181839ENST00000518318CDK13chr7

39991451

+POU6F2chr7

39446198

+
Frame-shiftENST00000181839ENST00000518318CDK13chr7

39991451

+POU6F2chr7

39472675

+
Frame-shiftENST00000181839ENST00000518318CDK13chr7

40118450

+POU6F2chr7

39379241

+
Frame-shiftENST00000340829ENST00000403058CDK13chr7

40041630

+POU6F2chr7

39472676

+
Frame-shiftENST00000340829ENST00000403058CDK13chr7

39991451

+POU6F2chr7

39472676

+
Frame-shiftENST00000340829ENST00000403058CDK13chr7

39991451

+POU6F2chr7

39446198

+
Frame-shiftENST00000340829ENST00000403058CDK13chr7

39991451

+POU6F2chr7

39472675

+
Frame-shiftENST00000340829ENST00000403058CDK13chr7

40118450

+POU6F2chr7

39379241

+
Frame-shiftENST00000340829ENST00000518318CDK13chr7

40041630

+POU6F2chr7

39472676

+
Frame-shiftENST00000340829ENST00000518318CDK13chr7

39991451

+POU6F2chr7

39472676

+
Frame-shiftENST00000340829ENST00000518318CDK13chr7

39991451

+POU6F2chr7

39446198

+
Frame-shiftENST00000340829ENST00000518318CDK13chr7

39991451

+POU6F2chr7

39472675

+
Frame-shiftENST00000340829ENST00000518318CDK13chr7

40118450

+POU6F2chr7

39379241

+
In-frameENST00000181839ENST00000403058CDK13chr7

40041630

+POU6F2chr7

39500146

+
In-frameENST00000181839ENST00000518318CDK13chr7

40041630

+POU6F2chr7

39500146

+
In-frameENST00000340829ENST00000403058CDK13chr7

40041630

+POU6F2chr7

39500146

+
In-frameENST00000340829ENST00000518318CDK13chr7

40041630

+POU6F2chr7

39500146

+
intron-3CDSENST00000484589ENST00000403058CDK13chr7

39991451

+POU6F2chr7

39472676

+
intron-3CDSENST00000484589ENST00000403058CDK13chr7

39991451

+POU6F2chr7

39446198

+
intron-3CDSENST00000484589ENST00000403058CDK13chr7

39991451

+POU6F2chr7

39472675

+
intron-3CDSENST00000484589ENST00000403058CDK13chr7

40118450

+POU6F2chr7

39379241

+
intron-3CDSENST00000484589ENST00000518318CDK13chr7

39991451

+POU6F2chr7

39472676

+
intron-3CDSENST00000484589ENST00000518318CDK13chr7

39991451

+POU6F2chr7

39446198

+
intron-3CDSENST00000484589ENST00000518318CDK13chr7

39991451

+POU6F2chr7

39472675

+
intron-3CDSENST00000484589ENST00000518318CDK13chr7

40118450

+POU6F2chr7

39379241

+
intron-3UTRENST00000484589ENST00000517348CDK13chr7

40118450

+POU6F2chr7

39379241

+
intron-3UTRENST00000484589ENST00000559001CDK13chr7

40118450

+POU6F2chr7

39379241

+
intron-intronENST00000484589ENST00000464276CDK13chr7

39991451

+POU6F2chr7

39472676

+
intron-intronENST00000484589ENST00000464276CDK13chr7

39991451

+POU6F2chr7

39446198

+
intron-intronENST00000484589ENST00000464276CDK13chr7

39991451

+POU6F2chr7

39472675

+
intron-intronENST00000484589ENST00000464276CDK13chr7

40118450

+POU6F2chr7

39379241

+
intron-intronENST00000484589ENST00000517348CDK13chr7

39991451

+POU6F2chr7

39472676

+
intron-intronENST00000484589ENST00000517348CDK13chr7

39991451

+POU6F2chr7

39446198

+
intron-intronENST00000484589ENST00000517348CDK13chr7

39991451

+POU6F2chr7

39472675

+
intron-intronENST00000484589ENST00000559001CDK13chr7

39991451

+POU6F2chr7

39472676

+
intron-intronENST00000484589ENST00000559001CDK13chr7

39991451

+POU6F2chr7

39446198

+
intron-intronENST00000484589ENST00000559001CDK13chr7

39991451

+POU6F2chr7

39472675

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000181839CDK13chr740041630+ENST00000403058POU6F2chr739500146+3737295860536311008
ENST00000181839CDK13chr740041630+ENST00000518318POU6F2chr739500146+743929586053523972
ENST00000340829CDK13chr740041630+ENST00000403058POU6F2chr739500146+3264248513231581008
ENST00000340829CDK13chr740041630+ENST00000518318POU6F2chr739500146+696624851323050972

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000181839ENST00000403058CDK13chr740041630+POU6F2chr739500146+0.0077863770.99221367
ENST00000181839ENST00000518318CDK13chr740041630+POU6F2chr739500146+0.0010303660.9989697
ENST00000340829ENST00000403058CDK13chr740041630+POU6F2chr739500146+0.0057209520.994279
ENST00000340829ENST00000518318CDK13chr740041630+POU6F2chr739500146+0.0006484470.99935156

Top

Fusion Genomic Features for CDK13-POU6F2


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
CDK13chr739991451+POU6F2chr739472675+0.0007041470.99929583
CDK13chr739991451+POU6F2chr739472675+0.0007041470.99929583
CDK13chr740041630+POU6F2chr739472675+8.48E-050.99991524
CDK13chr739991451+POU6F2chr739446198+4.35E-050.9999565
CDK13chr740041630+POU6F2chr739500145+8.19E-080.9999999
CDK13chr740118450+POU6F2chr739379240+1.65E-070.9999999
CDK13chr739991451+POU6F2chr739472675+0.0007041470.99929583
CDK13chr739991451+POU6F2chr739472675+0.0007041470.99929583
CDK13chr740041630+POU6F2chr739472675+8.48E-050.99991524
CDK13chr739991451+POU6F2chr739446198+4.35E-050.9999565
CDK13chr740041630+POU6F2chr739500145+8.19E-080.9999999
CDK13chr740118450+POU6F2chr739379240+1.65E-070.9999999

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

Top

Fusion Protein Features for CDK13-POU6F2


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr7:40041630/chr7:39500146)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCDK13chr7:40041630chr7:39500146ENST00000181839+514711_7197841513.0Nucleotide bindingATP
HgeneCDK13chr7:40041630chr7:39500146ENST00000340829+514711_7197841453.0Nucleotide bindingATP
TgenePOU6F2chr7:40041630chr7:39500146ENST00000403058811607_666467692.0DNA bindingHomeobox
TgenePOU6F2chr7:40041630chr7:39500146ENST00000518318710607_666467656.0DNA bindingHomeobox
TgenePOU6F2chr7:40041630chr7:39500146ENST00000403058811476_586467692.0DomainPOU-specific
TgenePOU6F2chr7:40041630chr7:39500146ENST00000518318710476_586467656.0DomainPOU-specific

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCDK13chr7:40041630chr7:39500146ENST00000181839+514705_9987841513.0DomainProtein kinase
HgeneCDK13chr7:40041630chr7:39500146ENST00000340829+514705_9987841453.0DomainProtein kinase
TgenePOU6F2chr7:40041630chr7:39500146ENST00000403058811167_446467692.0Compositional biasNote=Gln-rich
TgenePOU6F2chr7:40041630chr7:39500146ENST00000403058811197_293467692.0Compositional biasNote=Pro-rich
TgenePOU6F2chr7:40041630chr7:39500146ENST00000403058811435_461467692.0Compositional biasNote=Ser-rich
TgenePOU6F2chr7:40041630chr7:39500146ENST00000518318710167_446467656.0Compositional biasNote=Gln-rich
TgenePOU6F2chr7:40041630chr7:39500146ENST00000518318710197_293467656.0Compositional biasNote=Pro-rich
TgenePOU6F2chr7:40041630chr7:39500146ENST00000518318710435_461467656.0Compositional biasNote=Ser-rich


Top

Fusion Gene Sequence for CDK13-POU6F2


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>15164_15164_1_CDK13-POU6F2_CDK13_chr7_40041630_ENST00000181839_POU6F2_chr7_39500146_ENST00000403058_length(transcript)=3737nt_BP=2958nt
GCCCCGCGGGCCGCAGAGTGCGCGAGGCCCTAGGCCGGGAGTTGTTGTCAGGCCCAGGCCACTTCCGAGGCGCCTGCGGTGTGTCGCCGC
CACCACAGGAGGACGACGTCGACGCCGAGGAGGAGGCGGTGGAGGCGTGTTGTTGTCTCGCCCACTCCCCTCCCCTGAACTTGCACCCAA
CGTCAGGGCGCGATGGAGTGAAGCGGCGACGAAGGTGGTACTTCCGCGTTGCGCTGCCCGAGCCGAGAGCGCGGCCAAGGCCGCTCCCCC
ACCCCCGGGGGCACTTGGAGGACTCGGGACTCCCCCGCAGGTCAGCGCCCGGCGCATCTGGTGTTTTCGCTGCCGAGGATAGGACGACGA
GCGCAATCGGGAGCTCCGCCGCCCGGATTCCTGCTTCCCTGGGGCCCGGAGGCTGCTGCGTACCCCACTGTGACCTGGAACCCAGGGACC
CGAGTCCCGACCCGGATTATCGTGGCGCTTTTCCCGGCCGGCTCTGGTGCTCGGTGTCCCTCCGCCGCCGCTCCCGTTTCCGGCGGGGGA
GATGGCCAGGATCTGACCCGGGAGGAGGCCGCACCCGCGCCGCGCTCTGCGGCTGGCTCTAGGCGATGCCGAGCAGCTCGGACACGGCGC
TGGGGGGAGGCGGGGGCCTGAGCTGGGCGGAGAAGAAGTTGGAGGAACGCCGCAAGCGGAGGCGATTCCTGTCCCCTCAGCAGCCGCCGC
TGCTGTTGCCGCTCCTGCAGCCGCAGCTCCTGCAACCGCCGCCGCCCCCGCCGCCTCTGCTCTTCCTGGCTGCTCCCGGCACGGCCGCCG
CCGCAGCCGCCGCCGCCGCGGCCTCCTCCTCTTGCTTCAGCCCGGGCCCCCCTCTGGAGGTCAAGCGGCTGGCGAGAGGCAAGAGGCGCG
CAGGAGGGCGGCAGAAGCGGCGTCGCGGGCCCCGCGCCGGGCAGGAGGCGGAGAAGCGTCGGGTCTTCTCGCTGCCCCAGCCGCAGCAGG
ACGGCGGTGGCGGTGCTAGTAGCGGCGGGGGTGTGACCCCGCTGGTGGAATACGAGGATGTGAGCTCCCAGTCCGAGCAGGGGCTGCTGC
TGGGGGGGGCCAGCGCGGCAACGGCGGCGACGGCTGCCGGGGGAACGGGGGGCAGCGGCGGGAGTCCGGCCTCCTCCTCCGGCACCCAGC
GGCGCGGGGAGGGGTCGGAGCGCAGGCCCCGCCGGGACCGCCGCAGCAGCAGTGGCCGCAGCAAGGAGCGCCACCGCGAGCACCGGCGGC
GGGATGGGCAGCGCGGTGGCAGCGAGGCCTCCAAGTCCCGCAGCCGCCACAGCCACAGCGGCGAGGAACGGGCCGAGGTCGCCAAGAGCG
GCAGCAGCAGCAGCAGCGGCGGCCGCCGGAAAAGCGCTTCGGCCACATCCAGCAGCAGTAGCAGCCGCAAGGACCGGGACTCGAAGGCCC
ACCGCAGCCGGACTAAGTCGTCCAAGGAGCCGCCTTCGGCCTACAAGGAACCGCCCAAGGCCTACCGGGAGGACAAGACCGAGCCTAAGG
CCTACAGGCGGCGGCGGTCCCTCAGCCCACTGGGAGGCCGGGACGACAGCCCGGTGTCCCACAGGGCCTCTCAGAGCCTGAGGAGCCGCA
AGTCCCCCAGCCCGGCAGGAGGTGGCAGCAGCCCCTATTCTCGGCGGCTGCCGCGCTCCCCGAGCCCCTACAGTCGCCGCCGCTCCCCCA
GCTACAGCCGCCACAGCTCCTACGAGCGGGGCGGCGACGTGTCCCCTAGTCCCTACAGCAGCAGCAGCTGGCGCCGCTCTCGCAGTCCCT
ACAGCCCTGTGCTCAGACGGTCTGGAAAATCCCGAAGCAGAAGCCCGTATTCATCTAGGCATTCAAGATCTCGTAGCAGGCACAGATTGT
CTAGATCCAGAAGTCGTCATTCTAGTATTTCTCCTAGCACACTAACTCTGAAGAGTAGCCTGGCAGCTGAATTGAACAAGAATAAAAAAG
CACGAGCAGCAGAGGCAGCAAGAGCCGCAGAAGCAGCGAAAGCTGCAGAAGCAACTAAGGCTGCTGAGGCTGCTGCCAAGGCTGCAAAAG
CTTCAAACACTTCTACACCTACCAAGGGGAACACGGAAACTAGTGCCAGTGCATCACAAACAAACCATGTGAAGGATGTGAAGAAAATTA
AAATTGAACATGCACCTTCTCCCTCAAGTGGTGGAACTTTAAAAAATGACAAAGCAAAAACAAAGCCACCTCTTCAGGTAACGAAGGTGG
AAAATAATTTGATTGTAGATAAAGCCACCAAGAAAGCAGTCATAGTTGGAAAGGAGAGTAAATCTGCTGCTACAAAGGAGGAATCAGTAT
CTCTTAAAGAGAAAACCAAACCACTTACACCAAGCATAGGAGCCAAGGAGAAGGAGCAACATGTAGCTTTAGTCACCTCTACATTACCAC
CGTTACCTTTGCCTCCCATGCTGCCTGAAGATAAAGAAGCTGATAGCTTACGAGGAAATATTTCAGTAAAAGCAGTTAAAAAAGAAGTAG
AAAAGAAACTCCGATGTCTTCTTGCTGATTTACCGCTGCCCCCTGAGCTACCAGGAGGAGATGATCTTTCAAAGAGTCCAGAGGAAAAGA
AAACAGCAACACAGTTACATAGTAAAAGGAGGCCTAAAATATGTGGGCCTCGCTATGGTGAAACCAAAGAAAAAGATATTGACTGGGGAA
AACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGAAGGTACTTACGGACAAGTTTACAAAGCCAGGGATAAAGACACTGGAG
AAATGGTAGCCTTAAAAAAAGTACGTCTGGATAATGAAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGC
TTACCCATCAGAGTATTATCAATATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGGATTTCAAGAAGGACAAAGATCCTCAAACGG
CAGCGGGTGAGGTGGATGGGGTTAATCTGGAGGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCGGCGCCTGTCCCTTGGCCTGACCC
AGACTCAGGTGGGACAGGCTCTCAGTGCTACAGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACT
TTTTCCTACCACAGGAAGCCCAAGAGAACACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTG
AAAAGCTGGACATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAG
GTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTGAGATCC
TCAATGCCCACTTTGAGAAGAACACACACCCTTCTGGGCAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTA
GAGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGC
CCTTAACAGACTCTCTGGAAGAAAACTCCTAAAGAGATGCCCACCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGG
ACTCCACAACAACAACAACAACAAAATTTAATTTAATTTAAAAATAG

>15164_15164_1_CDK13-POU6F2_CDK13_chr7_40041630_ENST00000181839_POU6F2_chr7_39500146_ENST00000403058_length(amino acids)=1008AA_BP=29
MPSSSDTALGGGGGLSWAEKKLEERRKRRRFLSPQQPPLLLPLLQPQLLQPPPPPPPLLFLAAPGTAAAAAAAAAASSSCFSPGPPLEVK
RLARGKRRAGGRQKRRRGPRAGQEAEKRRVFSLPQPQQDGGGGASSGGGVTPLVEYEDVSSQSEQGLLLGGASAATAATAAGGTGGSGGS
PASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSS
RKDRDSKAHRSRTKSSKEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPRSPS
PYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLA
AELNKNKKARAAEAARAAEAAKAAEATKAAEAAAKAAKASNTSTPTKGNTETSASASQTNHVKDVKKIKIEHAPSPSSGGTLKNDKAKTK
PPLQVTKVENNLIVDKATKKAVIVGKESKSAATKEESVSLKEKTKPLTPSIGAKEKEQHVALVTSTLPPLPLPPMLPEDKEADSLRGNIS
VKAVKKEVEKKLRCLLADLPLPPELPGGDDLSKSPEEKKTATQLHSKRRPKICGPRYGETKEKDIDWGKRCVDKFDIIGIIGEGTYGQVY
KARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKDPQTAAGEVDGVNLEEIREFAKAFKI
RRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILRSHFFLPQEAQENTIASSLTAKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMA
EAEARHRAGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQHE
PATAVPLEPLTDSLEENS

--------------------------------------------------------------
>15164_15164_2_CDK13-POU6F2_CDK13_chr7_40041630_ENST00000181839_POU6F2_chr7_39500146_ENST00000518318_length(transcript)=7439nt_BP=2958nt
GCCCCGCGGGCCGCAGAGTGCGCGAGGCCCTAGGCCGGGAGTTGTTGTCAGGCCCAGGCCACTTCCGAGGCGCCTGCGGTGTGTCGCCGC
CACCACAGGAGGACGACGTCGACGCCGAGGAGGAGGCGGTGGAGGCGTGTTGTTGTCTCGCCCACTCCCCTCCCCTGAACTTGCACCCAA
CGTCAGGGCGCGATGGAGTGAAGCGGCGACGAAGGTGGTACTTCCGCGTTGCGCTGCCCGAGCCGAGAGCGCGGCCAAGGCCGCTCCCCC
ACCCCCGGGGGCACTTGGAGGACTCGGGACTCCCCCGCAGGTCAGCGCCCGGCGCATCTGGTGTTTTCGCTGCCGAGGATAGGACGACGA
GCGCAATCGGGAGCTCCGCCGCCCGGATTCCTGCTTCCCTGGGGCCCGGAGGCTGCTGCGTACCCCACTGTGACCTGGAACCCAGGGACC
CGAGTCCCGACCCGGATTATCGTGGCGCTTTTCCCGGCCGGCTCTGGTGCTCGGTGTCCCTCCGCCGCCGCTCCCGTTTCCGGCGGGGGA
GATGGCCAGGATCTGACCCGGGAGGAGGCCGCACCCGCGCCGCGCTCTGCGGCTGGCTCTAGGCGATGCCGAGCAGCTCGGACACGGCGC
TGGGGGGAGGCGGGGGCCTGAGCTGGGCGGAGAAGAAGTTGGAGGAACGCCGCAAGCGGAGGCGATTCCTGTCCCCTCAGCAGCCGCCGC
TGCTGTTGCCGCTCCTGCAGCCGCAGCTCCTGCAACCGCCGCCGCCCCCGCCGCCTCTGCTCTTCCTGGCTGCTCCCGGCACGGCCGCCG
CCGCAGCCGCCGCCGCCGCGGCCTCCTCCTCTTGCTTCAGCCCGGGCCCCCCTCTGGAGGTCAAGCGGCTGGCGAGAGGCAAGAGGCGCG
CAGGAGGGCGGCAGAAGCGGCGTCGCGGGCCCCGCGCCGGGCAGGAGGCGGAGAAGCGTCGGGTCTTCTCGCTGCCCCAGCCGCAGCAGG
ACGGCGGTGGCGGTGCTAGTAGCGGCGGGGGTGTGACCCCGCTGGTGGAATACGAGGATGTGAGCTCCCAGTCCGAGCAGGGGCTGCTGC
TGGGGGGGGCCAGCGCGGCAACGGCGGCGACGGCTGCCGGGGGAACGGGGGGCAGCGGCGGGAGTCCGGCCTCCTCCTCCGGCACCCAGC
GGCGCGGGGAGGGGTCGGAGCGCAGGCCCCGCCGGGACCGCCGCAGCAGCAGTGGCCGCAGCAAGGAGCGCCACCGCGAGCACCGGCGGC
GGGATGGGCAGCGCGGTGGCAGCGAGGCCTCCAAGTCCCGCAGCCGCCACAGCCACAGCGGCGAGGAACGGGCCGAGGTCGCCAAGAGCG
GCAGCAGCAGCAGCAGCGGCGGCCGCCGGAAAAGCGCTTCGGCCACATCCAGCAGCAGTAGCAGCCGCAAGGACCGGGACTCGAAGGCCC
ACCGCAGCCGGACTAAGTCGTCCAAGGAGCCGCCTTCGGCCTACAAGGAACCGCCCAAGGCCTACCGGGAGGACAAGACCGAGCCTAAGG
CCTACAGGCGGCGGCGGTCCCTCAGCCCACTGGGAGGCCGGGACGACAGCCCGGTGTCCCACAGGGCCTCTCAGAGCCTGAGGAGCCGCA
AGTCCCCCAGCCCGGCAGGAGGTGGCAGCAGCCCCTATTCTCGGCGGCTGCCGCGCTCCCCGAGCCCCTACAGTCGCCGCCGCTCCCCCA
GCTACAGCCGCCACAGCTCCTACGAGCGGGGCGGCGACGTGTCCCCTAGTCCCTACAGCAGCAGCAGCTGGCGCCGCTCTCGCAGTCCCT
ACAGCCCTGTGCTCAGACGGTCTGGAAAATCCCGAAGCAGAAGCCCGTATTCATCTAGGCATTCAAGATCTCGTAGCAGGCACAGATTGT
CTAGATCCAGAAGTCGTCATTCTAGTATTTCTCCTAGCACACTAACTCTGAAGAGTAGCCTGGCAGCTGAATTGAACAAGAATAAAAAAG
CACGAGCAGCAGAGGCAGCAAGAGCCGCAGAAGCAGCGAAAGCTGCAGAAGCAACTAAGGCTGCTGAGGCTGCTGCCAAGGCTGCAAAAG
CTTCAAACACTTCTACACCTACCAAGGGGAACACGGAAACTAGTGCCAGTGCATCACAAACAAACCATGTGAAGGATGTGAAGAAAATTA
AAATTGAACATGCACCTTCTCCCTCAAGTGGTGGAACTTTAAAAAATGACAAAGCAAAAACAAAGCCACCTCTTCAGGTAACGAAGGTGG
AAAATAATTTGATTGTAGATAAAGCCACCAAGAAAGCAGTCATAGTTGGAAAGGAGAGTAAATCTGCTGCTACAAAGGAGGAATCAGTAT
CTCTTAAAGAGAAAACCAAACCACTTACACCAAGCATAGGAGCCAAGGAGAAGGAGCAACATGTAGCTTTAGTCACCTCTACATTACCAC
CGTTACCTTTGCCTCCCATGCTGCCTGAAGATAAAGAAGCTGATAGCTTACGAGGAAATATTTCAGTAAAAGCAGTTAAAAAAGAAGTAG
AAAAGAAACTCCGATGTCTTCTTGCTGATTTACCGCTGCCCCCTGAGCTACCAGGAGGAGATGATCTTTCAAAGAGTCCAGAGGAAAAGA
AAACAGCAACACAGTTACATAGTAAAAGGAGGCCTAAAATATGTGGGCCTCGCTATGGTGAAACCAAAGAAAAAGATATTGACTGGGGAA
AACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGAAGGTACTTACGGACAAGTTTACAAAGCCAGGGATAAAGACACTGGAG
AAATGGTAGCCTTAAAAAAAGTACGTCTGGATAATGAAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGC
TTACCCATCAGAGTATTATCAATATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGGATTTCAAGAAGGACAAAGATCCTCAAACGG
CAGCGGGTGAGGTGGATGGGGTTAATCTGGAGGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCGGCGCCTGTCCCTTGGCCTGACCC
AGACTCAGGTGGGACAGGCTCTCAGTGCTACAGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAGGTTTGAAAAGCTGGACATCACCC
CTAAAAGTGCCCAGAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCG
AGTTTATCGGGAGTGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGA
AGAACACACACCCTTCTGGGCAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGCAATA
AGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAGACTCTCTGG
AAGAAAACTCCTAAAGAGATGCCCACCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAA
CAACAAAATTTAATTTAATTTAAAAATAGCCCCAGTCGTCATCACCCTTGTAAGTAAATGACTAAGAAAACTACCAAGTGGACAGAATGG
TTTCTACATGTCCGTTGGTTTTCCAAAAAGGAAAGAAGAAAATTTTTAGAAAATTTTTAAACAAGGAATACACCACACTGAAGGTGTGTG
TGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAAGCCAGTTTTTTAATGGACTTAAAGCAAACCAAATAACCACGTACTTTTTTC
TGTATATTATGAAAATGTGAACACATTTTAAGGAAAAAGAAAAAAAAAAACTAAACCAAAAACCAACAACGAAGGAACAAAAACTTTGAT
CTGTTCAAAGCGAATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTGATTCACTATGAAACCTATTAACC
AAAGTCAGAAACATGGCATTGCAACGCGATCGTTCGTCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
AGAACAATAGGAAGCCTGATTTCTCCCATCTTTCCCATCTACTGTCTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGG
CTCACTATTGGGTTTTTTTGTGGGGGTGGTAGGGAGGGTGGTCTTTTTTCTTTGTCTTTCTTTTTGACGGGAGGGCATCCTGGATCGTGT
GCCAAAGCATTTGTTGCTTTTTTCTCACTATGACTTGTGGGTTTGAGAAAAGAAAATGGAGCTCGCATTTCTCTCTTTTCCTCCATTTCT
CCATCTCCCTCGCGCGTGGCTCCTGGGGTCTGCTGGAAGGCCACAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAA
TGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACACCAGA
GCTTGGGATTTTTCTCAGTCTGTTGGCCACGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACATTTGGTT
CAATACTTACATCTATGTTATGCTTCTGTGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTCAGTCAAAT
ACACACATGACATGCACACACCCATAAACACACACACAAAGAAACAGGCTAAAAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCG
TGTATCCTGTTAATCTCATCTTTTCTGCTACTTCTTTCATTCCAATAGCGATGGCAGACTTTTTTCAGGGGGAATAATTACTCTTCGGGA
TATATAAATGGAGCAGAAAGGTGGCGGGCAAATTTAAACAACTGGAATTGGGGGCCAGGTTCTTCAGGGGAAAGGAAGTTTGAAGAAGCT
TTCACCAAAAGAAAAAAATATAGAAGGGGCTTATCTAACAATCAGAATAGCCTGCAATATGAGAACTAGAGGATTATTTCCTTTAAAAAA
AATAACTTAAAAGATCTGTGGGCCACAATAACCTAATAAGCAAGGACATGTTGGGATGTGAGGACGGCTGTGCAGGTGAGCACTTGGCAG
CTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAA
ATGTACATATTTATGCATAATTTATAATCATGCTAATGTATTATCTAGAAGTAAGTTGTGAAAGAAAAAAGAGAAACCCAATCTCAAGTT
GCCCAACTGATTAGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTTTCTTCTGTTGGCTCCTTTGCTGTT
TGTGTAAATGCTACAGTATAATTGTCCCCTCCAATGATTCATGCAGCAATCAAGAGACTACCAGCAAGGAAACTCTAAAAGGAATCCTGG
AAGTGGAACAAGTCACTCGTAAAGGTGTTTCCATTTTACCAGTCAATGCTAACTGGACCACAGCTAACTTGATCTTCAATGCCAACATCA
CAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCCAGAAACCCAAAACTTTATTGATTAAAACAGATTTTGGATTCTC
CTAGGACCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGGATGCTAAATATTTAAATAT
ATGCCGGCAGCGGTTACATAAGGCCTGCTCAGTTCTGAGATCTATAATTGGGAGGGTCTAACTAGGACAGGGAAAATATAAAATAAAAGT
AATCTTCCAGAGTGGAACAAAAAAGAAATATATTCATCCGACAGTCGTAACACCATTCATGTGCAGTGATTTTTTTATAGTTTTATAATT
TTGTATTGTTTTATAAATTATTTATAAGGTGTTGTAATGCTTCTTATATTAATTTTTTACAGATAAATTTTTTGCTACAAGGCATAAAAA
GGTGCCTGAACCGATTCTTAGGAATATAAATTATACTGTGTAACTCATAAGTCTTTGGGACCACACCTAATGCTTAATTTTATGATGACA
TTTCTCATGTCTACTTGTAAACAACTTCATATGCCAATGGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACC
CACAAAAAATAAAAGCCACTTTGGGCATATGTGATTGTATTTCAAGCTTCAGTATTTTTCTCACATAATTTTTAATTATTGTTATCTGCA
TTTTCATTACTTCATGAAAAAATGACAGTGGATATTACATTTTACACTTGTTTATAGATTTTCTTTCTTTTTCAACCAAGAAAATATTTT
GAACAATTGAAACTTTTAATTGCATTTGCAAGGTTTTGGCTTCTTTATGTTGTCATCACACAGATGCACACACACATACACATACAACAC
AAAAGAGAGAACAAAAAAGCAAAAGGAGCTAGGAAAAAAACAAAACAAAACAAGTAGAGGTGTATCAAAGAACTCAAGCTATAACCAAAA
AGAAATCGTAAAATGCCTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCACATTGTATAGATATGGCTAAA
TGTTGCTGACAATCTCGCAATACTAAACTGTTCCTATTTTAAGAAAAAAAAAAGAAATACAAACTGTTCATCAATGTTTTACCTCAGCAC
TCTACTTGTACCCAGTTAATGACCAAGCTTAAAAAAAAATTGAGATAAAGGAAATTGATTTTCATTTCAATGTTTGACTGTAAAATCTGT
TTGGATAACATTTTGTAATGAGCTTTTTGTCATGTGATTTGCTTGTCTTCAACTTGAAATTATGTGAGGCACATTTGTTTATTTGTTGTT
AAGAAAGTGATTTTTTTTTTTTTTTGTCCTATGTGCTGTGATCTAGACTGGTCACCGGGGTCACTTATGAGGCACCACAAAGAGATCTGC
TTCTCCGTGCCCGGAGCAGGCAGCAGGAGGGAGGGCAGGAAACAGGACTGGGTTGCTTTGGAAAAATCATCATGACAAGAAGTTGACATG
ATAGACTTGTGACCAAGAAGCCAAACTGAATATTTAAAAGCTCCTTACTTGCTCTGACATTGAAACCAAAGCTGATTTTATCTGCACAGG
TTGCTTAATATTTAAAAAAAAAAAAAACTGTACTTAATCTAGAGCAATATCTGTATGGTCAGTAAAGCTGCACTTTGTGTATTTCTTAAC
AGCTTCAGATCTGTCACTTTTAATTTGTACCATAAAAAATAAATAATTGTTTGACATGA

>15164_15164_2_CDK13-POU6F2_CDK13_chr7_40041630_ENST00000181839_POU6F2_chr7_39500146_ENST00000518318_length(amino acids)=972AA_BP=29
MPSSSDTALGGGGGLSWAEKKLEERRKRRRFLSPQQPPLLLPLLQPQLLQPPPPPPPLLFLAAPGTAAAAAAAAAASSSCFSPGPPLEVK
RLARGKRRAGGRQKRRRGPRAGQEAEKRRVFSLPQPQQDGGGGASSGGGVTPLVEYEDVSSQSEQGLLLGGASAATAATAAGGTGGSGGS
PASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSS
RKDRDSKAHRSRTKSSKEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPRSPS
PYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLA
AELNKNKKARAAEAARAAEAAKAAEATKAAEAAAKAAKASNTSTPTKGNTETSASASQTNHVKDVKKIKIEHAPSPSSGGTLKNDKAKTK
PPLQVTKVENNLIVDKATKKAVIVGKESKSAATKEESVSLKEKTKPLTPSIGAKEKEQHVALVTSTLPPLPLPPMLPEDKEADSLRGNIS
VKAVKKEVEKKLRCLLADLPLPPELPGGDDLSKSPEEKKTATQLHSKRRPKICGPRYGETKEKDIDWGKRCVDKFDIIGIIGEGTYGQVY
KARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKDPQTAAGEVDGVNLEEIREFAKAFKI
RRLSLGLTQTQVGQALSATEGPAYSQSAICRFEKLDITPKSAQKIKPVLERWMAEAEARHRAGMQNLTEFIGSEPSKKRKRRTSFTPQAL
EILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQHEPATAVPLEPLTDSLEENS

--------------------------------------------------------------
>15164_15164_3_CDK13-POU6F2_CDK13_chr7_40041630_ENST00000340829_POU6F2_chr7_39500146_ENST00000403058_length(transcript)=3264nt_BP=2485nt
GGCGCTTTTCCCGGCCGGCTCTGGTGCTCGGTGTCCCTCCGCCGCCGCTCCCGTTTCCGGCGGGGGAGATGGCCAGGATCTGACCCGGGA
GGAGGCCGCACCCGCGCCGCGCTCTGCGGCTGGCTCTAGGCGATGCCGAGCAGCTCGGACACGGCGCTGGGGGGAGGCGGGGGCCTGAGC
TGGGCGGAGAAGAAGTTGGAGGAACGCCGCAAGCGGAGGCGATTCCTGTCCCCTCAGCAGCCGCCGCTGCTGTTGCCGCTCCTGCAGCCG
CAGCTCCTGCAACCGCCGCCGCCCCCGCCGCCTCTGCTCTTCCTGGCTGCTCCCGGCACGGCCGCCGCCGCAGCCGCCGCCGCCGCGGCC
TCCTCCTCTTGCTTCAGCCCGGGCCCCCCTCTGGAGGTCAAGCGGCTGGCGAGAGGCAAGAGGCGCGCAGGAGGGCGGCAGAAGCGGCGT
CGCGGGCCCCGCGCCGGGCAGGAGGCGGAGAAGCGTCGGGTCTTCTCGCTGCCCCAGCCGCAGCAGGACGGCGGTGGCGGTGCTAGTAGC
GGCGGGGGTGTGACCCCGCTGGTGGAATACGAGGATGTGAGCTCCCAGTCCGAGCAGGGGCTGCTGCTGGGGGGGGCCAGCGCGGCAACG
GCGGCGACGGCTGCCGGGGGAACGGGGGGCAGCGGCGGGAGTCCGGCCTCCTCCTCCGGCACCCAGCGGCGCGGGGAGGGGTCGGAGCGC
AGGCCCCGCCGGGACCGCCGCAGCAGCAGTGGCCGCAGCAAGGAGCGCCACCGCGAGCACCGGCGGCGGGATGGGCAGCGCGGTGGCAGC
GAGGCCTCCAAGTCCCGCAGCCGCCACAGCCACAGCGGCGAGGAACGGGCCGAGGTCGCCAAGAGCGGCAGCAGCAGCAGCAGCGGCGGC
CGCCGGAAAAGCGCTTCGGCCACATCCAGCAGCAGTAGCAGCCGCAAGGACCGGGACTCGAAGGCCCACCGCAGCCGGACTAAGTCGTCC
AAGGAGCCGCCTTCGGCCTACAAGGAACCGCCCAAGGCCTACCGGGAGGACAAGACCGAGCCTAAGGCCTACAGGCGGCGGCGGTCCCTC
AGCCCACTGGGAGGCCGGGACGACAGCCCGGTGTCCCACAGGGCCTCTCAGAGCCTGAGGAGCCGCAAGTCCCCCAGCCCGGCAGGAGGT
GGCAGCAGCCCCTATTCTCGGCGGCTGCCGCGCTCCCCGAGCCCCTACAGTCGCCGCCGCTCCCCCAGCTACAGCCGCCACAGCTCCTAC
GAGCGGGGCGGCGACGTGTCCCCTAGTCCCTACAGCAGCAGCAGCTGGCGCCGCTCTCGCAGTCCCTACAGCCCTGTGCTCAGACGGTCT
GGAAAATCCCGAAGCAGAAGCCCGTATTCATCTAGGCATTCAAGATCTCGTAGCAGGCACAGATTGTCTAGATCCAGAAGTCGTCATTCT
AGTATTTCTCCTAGCACACTAACTCTGAAGAGTAGCCTGGCAGCTGAATTGAACAAGAATAAAAAAGCACGAGCAGCAGAGGCAGCAAGA
GCCGCAGAAGCAGCGAAAGCTGCAGAAGCAACTAAGGCTGCTGAGGCTGCTGCCAAGGCTGCAAAAGCTTCAAACACTTCTACACCTACC
AAGGGGAACACGGAAACTAGTGCCAGTGCATCACAAACAAACCATGTGAAGGATGTGAAGAAAATTAAAATTGAACATGCACCTTCTCCC
TCAAGTGGTGGAACTTTAAAAAATGACAAAGCAAAAACAAAGCCACCTCTTCAGGTAACGAAGGTGGAAAATAATTTGATTGTAGATAAA
GCCACCAAGAAAGCAGTCATAGTTGGAAAGGAGAGTAAATCTGCTGCTACAAAGGAGGAATCAGTATCTCTTAAAGAGAAAACCAAACCA
CTTACACCAAGCATAGGAGCCAAGGAGAAGGAGCAACATGTAGCTTTAGTCACCTCTACATTACCACCGTTACCTTTGCCTCCCATGCTG
CCTGAAGATAAAGAAGCTGATAGCTTACGAGGAAATATTTCAGTAAAAGCAGTTAAAAAAGAAGTAGAAAAGAAACTCCGATGTCTTCTT
GCTGATTTACCGCTGCCCCCTGAGCTACCAGGAGGAGATGATCTTTCAAAGAGTCCAGAGGAAAAGAAAACAGCAACACAGTTACATAGT
AAAAGGAGGCCTAAAATATGTGGGCCTCGCTATGGTGAAACCAAAGAAAAAGATATTGACTGGGGAAAACGCTGCGTGGATAAATTTGAT
ATCATCGGAATTATTGGAGAAGGTACTTACGGACAAGTTTACAAAGCCAGGGATAAAGACACTGGAGAAATGGTAGCCTTAAAAAAAGTA
CGTCTGGATAATGAAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGCTTACCCATCAGAGTATTATCAAT
ATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGGATTTCAAGAAGGACAAAGATCCTCAAACGGCAGCGGGTGAGGTGGATGGGGTT
AATCTGGAGGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCGGCGCCTGTCCCTTGGCCTGACCCAGACTCAGGTGGGACAGGCTCTC
AGTGCTACAGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAA
GAGAACACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGGACATCACCCCTAAA
AGTGCCCAGAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTT
ATCGGGAGTGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGAAGAAC
ACACACCCTTCTGGGCAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGCAATAAGAGG
CAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAGACTCTCTGGAAGAA
AACTCCTAAAGAGATGCCCACCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
AAATTTAATTTAATTTAAAAATAG

>15164_15164_3_CDK13-POU6F2_CDK13_chr7_40041630_ENST00000340829_POU6F2_chr7_39500146_ENST00000403058_length(amino acids)=1008AA_BP=29
MPSSSDTALGGGGGLSWAEKKLEERRKRRRFLSPQQPPLLLPLLQPQLLQPPPPPPPLLFLAAPGTAAAAAAAAAASSSCFSPGPPLEVK
RLARGKRRAGGRQKRRRGPRAGQEAEKRRVFSLPQPQQDGGGGASSGGGVTPLVEYEDVSSQSEQGLLLGGASAATAATAAGGTGGSGGS
PASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSS
RKDRDSKAHRSRTKSSKEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPRSPS
PYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLA
AELNKNKKARAAEAARAAEAAKAAEATKAAEAAAKAAKASNTSTPTKGNTETSASASQTNHVKDVKKIKIEHAPSPSSGGTLKNDKAKTK
PPLQVTKVENNLIVDKATKKAVIVGKESKSAATKEESVSLKEKTKPLTPSIGAKEKEQHVALVTSTLPPLPLPPMLPEDKEADSLRGNIS
VKAVKKEVEKKLRCLLADLPLPPELPGGDDLSKSPEEKKTATQLHSKRRPKICGPRYGETKEKDIDWGKRCVDKFDIIGIIGEGTYGQVY
KARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKDPQTAAGEVDGVNLEEIREFAKAFKI
RRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILRSHFFLPQEAQENTIASSLTAKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMA
EAEARHRAGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQHE
PATAVPLEPLTDSLEENS

--------------------------------------------------------------
>15164_15164_4_CDK13-POU6F2_CDK13_chr7_40041630_ENST00000340829_POU6F2_chr7_39500146_ENST00000518318_length(transcript)=6966nt_BP=2485nt
GGCGCTTTTCCCGGCCGGCTCTGGTGCTCGGTGTCCCTCCGCCGCCGCTCCCGTTTCCGGCGGGGGAGATGGCCAGGATCTGACCCGGGA
GGAGGCCGCACCCGCGCCGCGCTCTGCGGCTGGCTCTAGGCGATGCCGAGCAGCTCGGACACGGCGCTGGGGGGAGGCGGGGGCCTGAGC
TGGGCGGAGAAGAAGTTGGAGGAACGCCGCAAGCGGAGGCGATTCCTGTCCCCTCAGCAGCCGCCGCTGCTGTTGCCGCTCCTGCAGCCG
CAGCTCCTGCAACCGCCGCCGCCCCCGCCGCCTCTGCTCTTCCTGGCTGCTCCCGGCACGGCCGCCGCCGCAGCCGCCGCCGCCGCGGCC
TCCTCCTCTTGCTTCAGCCCGGGCCCCCCTCTGGAGGTCAAGCGGCTGGCGAGAGGCAAGAGGCGCGCAGGAGGGCGGCAGAAGCGGCGT
CGCGGGCCCCGCGCCGGGCAGGAGGCGGAGAAGCGTCGGGTCTTCTCGCTGCCCCAGCCGCAGCAGGACGGCGGTGGCGGTGCTAGTAGC
GGCGGGGGTGTGACCCCGCTGGTGGAATACGAGGATGTGAGCTCCCAGTCCGAGCAGGGGCTGCTGCTGGGGGGGGCCAGCGCGGCAACG
GCGGCGACGGCTGCCGGGGGAACGGGGGGCAGCGGCGGGAGTCCGGCCTCCTCCTCCGGCACCCAGCGGCGCGGGGAGGGGTCGGAGCGC
AGGCCCCGCCGGGACCGCCGCAGCAGCAGTGGCCGCAGCAAGGAGCGCCACCGCGAGCACCGGCGGCGGGATGGGCAGCGCGGTGGCAGC
GAGGCCTCCAAGTCCCGCAGCCGCCACAGCCACAGCGGCGAGGAACGGGCCGAGGTCGCCAAGAGCGGCAGCAGCAGCAGCAGCGGCGGC
CGCCGGAAAAGCGCTTCGGCCACATCCAGCAGCAGTAGCAGCCGCAAGGACCGGGACTCGAAGGCCCACCGCAGCCGGACTAAGTCGTCC
AAGGAGCCGCCTTCGGCCTACAAGGAACCGCCCAAGGCCTACCGGGAGGACAAGACCGAGCCTAAGGCCTACAGGCGGCGGCGGTCCCTC
AGCCCACTGGGAGGCCGGGACGACAGCCCGGTGTCCCACAGGGCCTCTCAGAGCCTGAGGAGCCGCAAGTCCCCCAGCCCGGCAGGAGGT
GGCAGCAGCCCCTATTCTCGGCGGCTGCCGCGCTCCCCGAGCCCCTACAGTCGCCGCCGCTCCCCCAGCTACAGCCGCCACAGCTCCTAC
GAGCGGGGCGGCGACGTGTCCCCTAGTCCCTACAGCAGCAGCAGCTGGCGCCGCTCTCGCAGTCCCTACAGCCCTGTGCTCAGACGGTCT
GGAAAATCCCGAAGCAGAAGCCCGTATTCATCTAGGCATTCAAGATCTCGTAGCAGGCACAGATTGTCTAGATCCAGAAGTCGTCATTCT
AGTATTTCTCCTAGCACACTAACTCTGAAGAGTAGCCTGGCAGCTGAATTGAACAAGAATAAAAAAGCACGAGCAGCAGAGGCAGCAAGA
GCCGCAGAAGCAGCGAAAGCTGCAGAAGCAACTAAGGCTGCTGAGGCTGCTGCCAAGGCTGCAAAAGCTTCAAACACTTCTACACCTACC
AAGGGGAACACGGAAACTAGTGCCAGTGCATCACAAACAAACCATGTGAAGGATGTGAAGAAAATTAAAATTGAACATGCACCTTCTCCC
TCAAGTGGTGGAACTTTAAAAAATGACAAAGCAAAAACAAAGCCACCTCTTCAGGTAACGAAGGTGGAAAATAATTTGATTGTAGATAAA
GCCACCAAGAAAGCAGTCATAGTTGGAAAGGAGAGTAAATCTGCTGCTACAAAGGAGGAATCAGTATCTCTTAAAGAGAAAACCAAACCA
CTTACACCAAGCATAGGAGCCAAGGAGAAGGAGCAACATGTAGCTTTAGTCACCTCTACATTACCACCGTTACCTTTGCCTCCCATGCTG
CCTGAAGATAAAGAAGCTGATAGCTTACGAGGAAATATTTCAGTAAAAGCAGTTAAAAAAGAAGTAGAAAAGAAACTCCGATGTCTTCTT
GCTGATTTACCGCTGCCCCCTGAGCTACCAGGAGGAGATGATCTTTCAAAGAGTCCAGAGGAAAAGAAAACAGCAACACAGTTACATAGT
AAAAGGAGGCCTAAAATATGTGGGCCTCGCTATGGTGAAACCAAAGAAAAAGATATTGACTGGGGAAAACGCTGCGTGGATAAATTTGAT
ATCATCGGAATTATTGGAGAAGGTACTTACGGACAAGTTTACAAAGCCAGGGATAAAGACACTGGAGAAATGGTAGCCTTAAAAAAAGTA
CGTCTGGATAATGAAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGCTTACCCATCAGAGTATTATCAAT
ATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGGATTTCAAGAAGGACAAAGATCCTCAAACGGCAGCGGGTGAGGTGGATGGGGTT
AATCTGGAGGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCGGCGCCTGTCCCTTGGCCTGACCCAGACTCAGGTGGGACAGGCTCTC
AGTGCTACAGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAGGTTTGAAAAGCTGGACATCACCCCTAAAAGTGCCCAGAAGATCAAG
CCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCC
AAAAAGCGCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGAAGAACACACACCCTTCTGGGCAG
GAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACA
ATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAGACTCTCTGGAAGAAAACTCCTAAAGAGATGCC
CACCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAAATTTAATTTAATTTAA
AAATAGCCCCAGTCGTCATCACCCTTGTAAGTAAATGACTAAGAAAACTACCAAGTGGACAGAATGGTTTCTACATGTCCGTTGGTTTTC
CAAAAAGGAAAGAAGAAAATTTTTAGAAAATTTTTAAACAAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCC
ACCTGTCTCCCCCAAAGCCAGTTTTTTAATGGACTTAAAGCAAACCAAATAACCACGTACTTTTTTCTGTATATTATGAAAATGTGAACA
CATTTTAAGGAAAAAGAAAAAAAAAAACTAAACCAAAAACCAACAACGAAGGAACAAAAACTTTGATCTGTTCAAAGCGAATACAAGCCT
GCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCA
ACGCGATCGTTCGTCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAACAGAACAATAGGAAGCCTGATTTC
TCCCATCTTTCCCATCTACTGTCTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATTGGGTTTTTTTGTGG
GGGTGGTAGGGAGGGTGGTCTTTTTTCTTTGTCTTTCTTTTTGACGGGAGGGCATCCTGGATCGTGTGCCAAAGCATTTGTTGCTTTTTT
CTCACTATGACTTGTGGGTTTGAGAAAAGAAAATGGAGCTCGCATTTCTCTCTTTTCCTCCATTTCTCCATCTCCCTCGCGCGTGGCTCC
TGGGGTCTGCTGGAAGGCCACAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGAGAGACTCCAAAATAAC
TAGGGCTTTGCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGT
TGGCCACGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACATTTGGTTCAATACTTACATCTATGTTATGC
TTCTGTGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTCAGTCAAATACACACATGACATGCACACACCC
ATAAACACACACACAAAGAAACAGGCTAAAAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCTCATCTTT
TCTGCTACTTCTTTCATTCCAATAGCGATGGCAGACTTTTTTCAGGGGGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTG
GCGGGCAAATTTAAACAACTGGAATTGGGGGCCAGGTTCTTCAGGGGAAAGGAAGTTTGAAGAAGCTTTCACCAAAAGAAAAAAATATAG
AAGGGGCTTATCTAACAATCAGAATAGCCTGCAATATGAGAACTAGAGGATTATTTCCTTTAAAAAAAATAACTTAAAAGATCTGTGGGC
CACAATAACCTAATAAGCAAGGACATGTTGGGATGTGAGGACGGCTGTGCAGGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAG
GTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATTTATGCATAATTT
ATAATCATGCTAATGTATTATCTAGAAGTAAGTTGTGAAAGAAAAAAGAGAAACCCAATCTCAAGTTGCCCAACTGATTAGAAATGCCAT
CTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTTTCTTCTGTTGGCTCCTTTGCTGTTTGTGTAAATGCTACAGTATAATT
GTCCCCTCCAATGATTCATGCAGCAATCAAGAGACTACCAGCAAGGAAACTCTAAAAGGAATCCTGGAAGTGGAACAAGTCACTCGTAAA
GGTGTTTCCATTTTACCAGTCAATGCTAACTGGACCACAGCTAACTTGATCTTCAATGCCAACATCACAGAGCCCCTTTCGCCACCTCAA
AAACTGCACAAACATGGACAACCCAGAAACCCAAAACTTTATTGATTAAAACAGATTTTGGATTCTCCTAGGACCTGCTCCAAATTCCAT
CAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGGATGCTAAATATTTAAATATATGCCGGCAGCGGTTACATAAGG
CCTGCTCAGTTCTGAGATCTATAATTGGGAGGGTCTAACTAGGACAGGGAAAATATAAAATAAAAGTAATCTTCCAGAGTGGAACAAAAA
AGAAATATATTCATCCGACAGTCGTAACACCATTCATGTGCAGTGATTTTTTTATAGTTTTATAATTTTGTATTGTTTTATAAATTATTT
ATAAGGTGTTGTAATGCTTCTTATATTAATTTTTTACAGATAAATTTTTTGCTACAAGGCATAAAAAGGTGCCTGAACCGATTCTTAGGA
ATATAAATTATACTGTGTAACTCATAAGTCTTTGGGACCACACCTAATGCTTAATTTTATGATGACATTTCTCATGTCTACTTGTAAACA
ACTTCATATGCCAATGGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCACAAAAAATAAAAGCCACTTTG
GGCATATGTGATTGTATTTCAAGCTTCAGTATTTTTCTCACATAATTTTTAATTATTGTTATCTGCATTTTCATTACTTCATGAAAAAAT
GACAGTGGATATTACATTTTACACTTGTTTATAGATTTTCTTTCTTTTTCAACCAAGAAAATATTTTGAACAATTGAAACTTTTAATTGC
ATTTGCAAGGTTTTGGCTTCTTTATGTTGTCATCACACAGATGCACACACACATACACATACAACACAAAAGAGAGAACAAAAAAGCAAA
AGGAGCTAGGAAAAAAACAAAACAAAACAAGTAGAGGTGTATCAAAGAACTCAAGCTATAACCAAAAAGAAATCGTAAAATGCCTTTGCT
CGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATAC
TAAACTGTTCCTATTTTAAGAAAAAAAAAAGAAATACAAACTGTTCATCAATGTTTTACCTCAGCACTCTACTTGTACCCAGTTAATGAC
CAAGCTTAAAAAAAAATTGAGATAAAGGAAATTGATTTTCATTTCAATGTTTGACTGTAAAATCTGTTTGGATAACATTTTGTAATGAGC
TTTTTGTCATGTGATTTGCTTGTCTTCAACTTGAAATTATGTGAGGCACATTTGTTTATTTGTTGTTAAGAAAGTGATTTTTTTTTTTTT
TTGTCCTATGTGCTGTGATCTAGACTGGTCACCGGGGTCACTTATGAGGCACCACAAAGAGATCTGCTTCTCCGTGCCCGGAGCAGGCAG
CAGGAGGGAGGGCAGGAAACAGGACTGGGTTGCTTTGGAAAAATCATCATGACAAGAAGTTGACATGATAGACTTGTGACCAAGAAGCCA
AACTGAATATTTAAAAGCTCCTTACTTGCTCTGACATTGAAACCAAAGCTGATTTTATCTGCACAGGTTGCTTAATATTTAAAAAAAAAA
AAAACTGTACTTAATCTAGAGCAATATCTGTATGGTCAGTAAAGCTGCACTTTGTGTATTTCTTAACAGCTTCAGATCTGTCACTTTTAA
TTTGTACCATAAAAAATAAATAATTGTTTGACATGA

>15164_15164_4_CDK13-POU6F2_CDK13_chr7_40041630_ENST00000340829_POU6F2_chr7_39500146_ENST00000518318_length(amino acids)=972AA_BP=29
MPSSSDTALGGGGGLSWAEKKLEERRKRRRFLSPQQPPLLLPLLQPQLLQPPPPPPPLLFLAAPGTAAAAAAAAAASSSCFSPGPPLEVK
RLARGKRRAGGRQKRRRGPRAGQEAEKRRVFSLPQPQQDGGGGASSGGGVTPLVEYEDVSSQSEQGLLLGGASAATAATAAGGTGGSGGS
PASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSS
RKDRDSKAHRSRTKSSKEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPRSPS
PYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLA
AELNKNKKARAAEAARAAEAAKAAEATKAAEAAAKAAKASNTSTPTKGNTETSASASQTNHVKDVKKIKIEHAPSPSSGGTLKNDKAKTK
PPLQVTKVENNLIVDKATKKAVIVGKESKSAATKEESVSLKEKTKPLTPSIGAKEKEQHVALVTSTLPPLPLPPMLPEDKEADSLRGNIS
VKAVKKEVEKKLRCLLADLPLPPELPGGDDLSKSPEEKKTATQLHSKRRPKICGPRYGETKEKDIDWGKRCVDKFDIIGIIGEGTYGQVY
KARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKDPQTAAGEVDGVNLEEIREFAKAFKI
RRLSLGLTQTQVGQALSATEGPAYSQSAICRFEKLDITPKSAQKIKPVLERWMAEAEARHRAGMQNLTEFIGSEPSKKRKRRTSFTPQAL
EILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQHEPATAVPLEPLTDSLEENS

--------------------------------------------------------------

Top

Fusion Gene PPI Analysis for CDK13-POU6F2


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

Related Drugs for CDK13-POU6F2


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

Related Diseases for CDK13-POU6F2


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneCDK13C4479246CONGENITAL HEART DEFECTS, DYSMORPHIC FACIAL FEATURES, AND INTELLECTUAL DEVELOPMENTAL DISORDER3CTD_human;GENOMICS_ENGLAND;UNIPROT
TgeneC0004352Autistic Disorder1CTD_human
TgeneC1832099Wilms tumor and radial bilateral aplasia1CTD_human;UNIPROT