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Fusion Protein:CDK14-PUM2 |
Fusion Gene and Fusion Protein Summary |
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Fusion partner gene information | Fusion gene name: CDK14-PUM2 | FusionPDB ID: 15181 | FusionGDB2.0 ID: 15181 | Hgene | Tgene | Gene symbol | CDK14 | PUM2 | Gene ID | 5218 | 23369 |
Gene name | cyclin dependent kinase 14 | pumilio RNA binding family member 2 | |
Synonyms | PFTAIRE1|PFTK1 | PUMH2|PUML2 | |
Cytomap | 7q21.13 | 2p24.1 | |
Type of gene | protein-coding | protein-coding | |
Description | cyclin-dependent kinase 14PFTAIRE protein kinase 1cell division protein kinase 14serine/threonine-protein kinase PFTAIRE-1 | pumilio homolog 2pumilio-2 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | O94921 Main function of 5'-partner protein: FUNCTION: Serine/threonine-protein kinase involved in the control of the eukaryotic cell cycle, whose activity is controlled by an associated cyclin. Acts as a cell-cycle regulator of Wnt signaling pathway during G2/M phase by mediating the phosphorylation of LRP6 at 'Ser-1490', leading to the activation of the Wnt signaling pathway. Acts as a regulator of cell cycle progression and cell proliferation via its interaction with CCDN3. Phosphorylates RB1 in vitro, however the relevance of such result remains to be confirmed in vivo. May also play a role in meiosis, neuron differentiation and may indirectly act as a negative regulator of insulin-responsive glucose transport. {ECO:0000269|PubMed:16461467, ECO:0000269|PubMed:17517622, ECO:0000269|PubMed:19524571, ECO:0000269|PubMed:20059949}. | . | |
Ensembl transtripts involved in fusion gene | ENST ids | ENST00000265741, ENST00000380050, ENST00000406263, ENST00000436577, ENST00000496279, | ENST00000420234, ENST00000319801, ENST00000338086, ENST00000361078, ENST00000403432, ENST00000536417, |
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 17 X 13 X 8=1768 | 11 X 9 X 5=495 |
# samples | 18 | 13 | |
** MAII score | log2(18/1768*10)=-3.29604946306176 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(13/495*10)=-1.92891690193852 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Fusion gene context | PubMed: CDK14 [Title/Abstract] AND PUM2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Fusion neoantigen context | PubMed: CDK14 [Title/Abstract] AND PUM2 [Title/Abstract] AND neoantigen [Title/Abstract] | ||
Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | CDK14(90547039)-PUM2(20483247), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | CDK14-PUM2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CDK14-PUM2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CDK14-PUM2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CDK14-PUM2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | CDK14 | GO:0000086 | G2/M transition of mitotic cell cycle | 20059949 |
Hgene | CDK14 | GO:0060828 | regulation of canonical Wnt signaling pathway | 20059949 |
Tgene | PUM2 | GO:0010608 | posttranscriptional regulation of gene expression | 25100735 |
Tgene | PUM2 | GO:0043488 | regulation of mRNA stability | 26724866 |
Tgene | PUM2 | GO:0051983 | regulation of chromosome segregation | 26724866 |
Tgene | PUM2 | GO:1900246 | positive regulation of RIG-I signaling pathway | 25340845 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr7:90547039/chr2:20483247) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Amino Acid Sequences |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000380050 | CDK14 | chr7 | 90547039 | + | ENST00000338086 | PUM2 | chr2 | 20483247 | - | 5755 | 957 | 77 | 2860 | 927 |
ENST00000380050 | CDK14 | chr7 | 90547039 | + | ENST00000319801 | PUM2 | chr2 | 20483247 | - | 5523 | 957 | 77 | 2629 | 850 |
ENST00000380050 | CDK14 | chr7 | 90547039 | + | ENST00000361078 | PUM2 | chr2 | 20483247 | - | 5760 | 957 | 77 | 2866 | 929 |
ENST00000380050 | CDK14 | chr7 | 90547039 | + | ENST00000536417 | PUM2 | chr2 | 20483247 | - | 3136 | 957 | 77 | 2860 | 927 |
ENST00000380050 | CDK14 | chr7 | 90547039 | + | ENST00000403432 | PUM2 | chr2 | 20483247 | - | 3136 | 957 | 77 | 2860 | 927 |
ENST00000265741 | CDK14 | chr7 | 90547039 | + | ENST00000338086 | PUM2 | chr2 | 20483247 | - | 5714 | 916 | 144 | 2819 | 891 |
ENST00000265741 | CDK14 | chr7 | 90547039 | + | ENST00000319801 | PUM2 | chr2 | 20483247 | - | 5482 | 916 | 144 | 2588 | 814 |
ENST00000265741 | CDK14 | chr7 | 90547039 | + | ENST00000361078 | PUM2 | chr2 | 20483247 | - | 5719 | 916 | 144 | 2825 | 893 |
ENST00000265741 | CDK14 | chr7 | 90547039 | + | ENST00000536417 | PUM2 | chr2 | 20483247 | - | 3095 | 916 | 144 | 2819 | 891 |
ENST00000265741 | CDK14 | chr7 | 90547039 | + | ENST00000403432 | PUM2 | chr2 | 20483247 | - | 3095 | 916 | 144 | 2819 | 891 |
ENST00000406263 | CDK14 | chr7 | 90547039 | + | ENST00000338086 | PUM2 | chr2 | 20483247 | - | 5928 | 1130 | 442 | 3033 | 863 |
ENST00000406263 | CDK14 | chr7 | 90547039 | + | ENST00000319801 | PUM2 | chr2 | 20483247 | - | 5696 | 1130 | 442 | 2802 | 786 |
ENST00000406263 | CDK14 | chr7 | 90547039 | + | ENST00000361078 | PUM2 | chr2 | 20483247 | - | 5933 | 1130 | 442 | 3039 | 865 |
ENST00000406263 | CDK14 | chr7 | 90547039 | + | ENST00000536417 | PUM2 | chr2 | 20483247 | - | 3309 | 1130 | 442 | 3033 | 863 |
ENST00000406263 | CDK14 | chr7 | 90547039 | + | ENST00000403432 | PUM2 | chr2 | 20483247 | - | 3309 | 1130 | 442 | 3033 | 863 |
ENST00000436577 | CDK14 | chr7 | 90547039 | + | ENST00000338086 | PUM2 | chr2 | 20483247 | - | 5502 | 704 | 256 | 2607 | 783 |
ENST00000436577 | CDK14 | chr7 | 90547039 | + | ENST00000319801 | PUM2 | chr2 | 20483247 | - | 5270 | 704 | 256 | 2376 | 706 |
ENST00000436577 | CDK14 | chr7 | 90547039 | + | ENST00000361078 | PUM2 | chr2 | 20483247 | - | 5507 | 704 | 256 | 2613 | 785 |
ENST00000436577 | CDK14 | chr7 | 90547039 | + | ENST00000536417 | PUM2 | chr2 | 20483247 | - | 2883 | 704 | 256 | 2607 | 783 |
ENST00000436577 | CDK14 | chr7 | 90547039 | + | ENST00000403432 | PUM2 | chr2 | 20483247 | - | 2883 | 704 | 256 | 2607 | 783 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000380050 | ENST00000338086 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.000231225 | 0.9997688 |
ENST00000380050 | ENST00000319801 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.000271482 | 0.9997285 |
ENST00000380050 | ENST00000361078 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.000193422 | 0.9998066 |
ENST00000380050 | ENST00000536417 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.003805456 | 0.9961946 |
ENST00000380050 | ENST00000403432 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.003805456 | 0.9961946 |
ENST00000265741 | ENST00000338086 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.00013344 | 0.9998665 |
ENST00000265741 | ENST00000319801 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.000149335 | 0.99985063 |
ENST00000265741 | ENST00000361078 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.000126145 | 0.9998739 |
ENST00000265741 | ENST00000536417 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.002655935 | 0.9973441 |
ENST00000265741 | ENST00000403432 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.002655935 | 0.9973441 |
ENST00000406263 | ENST00000338086 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.000150737 | 0.9998492 |
ENST00000406263 | ENST00000319801 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.000111156 | 0.9998888 |
ENST00000406263 | ENST00000361078 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.00012674 | 0.9998733 |
ENST00000406263 | ENST00000536417 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.002195517 | 0.99780446 |
ENST00000406263 | ENST00000403432 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.002195517 | 0.99780446 |
ENST00000436577 | ENST00000338086 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.000777506 | 0.9992225 |
ENST00000436577 | ENST00000319801 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.000591458 | 0.9994086 |
ENST00000436577 | ENST00000361078 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.000657603 | 0.9993424 |
ENST00000436577 | ENST00000536417 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.009850368 | 0.9901496 |
ENST00000436577 | ENST00000403432 | CDK14 | chr7 | 90547039 | + | PUM2 | chr2 | 20483247 | - | 0.009850368 | 0.9901496 |
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Get the fusion protein sequences from here. |
Fusion protein sequence information is available in the fasta format. >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP |
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Fusion Protein Breakpoint Sequences for CDK14-PUM2 |
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Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | Length(fusion protein) | BP in fusion protein | Peptide |
CDK14 | chr7 | 90547039 | PUM2 | chr2 | 20483247 | 1130 | 229 | LISDTGELKLADFGYQVLAPTAYYDQ |
CDK14 | chr7 | 90547039 | PUM2 | chr2 | 20483247 | 704 | 149 | LISDTGELKLADFGYQVLAPTAYYDQ |
CDK14 | chr7 | 90547039 | PUM2 | chr2 | 20483247 | 916 | 257 | LISDTGELKLADFGYQVLAPTAYYDQ |
CDK14 | chr7 | 90547039 | PUM2 | chr2 | 20483247 | 957 | 293 | LISDTGELKLADFGYQVLAPTAYYDQ |
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Potential FusionNeoAntigen Information of CDK14-PUM2 in HLA I |
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CDK14-PUM2_90547039_20483247.msa |
![]() * We used NetMHCpan v4.1 (%rank<0.5) and deepHLApan v1.1 (immunogenic score>0.5) |
Fusion gene | Hchr | Hbp | Tgene | Tchr | Tbp | HLA I | FusionNeoAntigen peptide | Binding score | Immunogenic score | Neoantigen start (at BP 13) | Neoantigen end (at BP 13) |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:22 | KLADFGYQV | 0.9995 | 0.6882 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:60 | KLADFGYQV | 0.9994 | 0.7261 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:67 | KLADFGYQV | 0.9994 | 0.7521 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:11 | KLADFGYQV | 0.9994 | 0.7914 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:30 | KLADFGYQV | 0.9994 | 0.7521 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:24 | KLADFGYQV | 0.9994 | 0.7521 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:21 | KLADFGYQV | 0.9993 | 0.8358 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:16 | KLADFGYQV | 0.9993 | 0.753 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:27 | KLADFGYQV | 0.9992 | 0.736 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:38 | KLADFGYQV | 0.999 | 0.717 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:13 | KLADFGYQV | 0.999 | 0.8028 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:19 | KLADFGYQV | 0.9984 | 0.5016 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:04 | KLADFGYQV | 0.9958 | 0.9331 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:17 | KLADFGYQV | 0.9951 | 0.8376 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:35 | KLADFGYQV | 0.9937 | 0.7796 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:29 | KLADFGYQV | 0.991 | 0.7577 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:20 | KLADFGYQV | 0.9801 | 0.7592 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B35:03 | LADFGYQVL | 0.9635 | 0.9743 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B45:01 | ADFGYQVLA | 0.9248 | 0.8809 | 10 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B50:02 | ADFGYQVLA | 0.8876 | 0.8328 | 10 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:02 | ELKLADFGY | 0.878 | 0.8375 | 6 | 15 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B35:04 | LADFGYQVL | 0.8506 | 0.9882 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B35:02 | LADFGYQVL | 0.8506 | 0.9882 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B50:01 | ADFGYQVLA | 0.6091 | 0.9568 | 10 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A32:13 | KLADFGYQV | 0.5851 | 0.9747 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B41:01 | ADFGYQVLA | 0.5174 | 0.9501 | 10 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B13:02 | KLADFGYQV | 0.3066 | 0.9953 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B13:01 | KLADFGYQV | 0.276 | 0.9984 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:22 | KLADFGYQVL | 0.9988 | 0.6441 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B44:03 | GELKLADFGY | 0.9983 | 0.9407 | 5 | 15 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:13 | KLADFGYQVL | 0.9982 | 0.8247 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:24 | KLADFGYQVL | 0.9976 | 0.7249 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:67 | KLADFGYQVL | 0.9976 | 0.7249 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:30 | KLADFGYQVL | 0.9976 | 0.7249 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:11 | KLADFGYQVL | 0.9976 | 0.7578 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:60 | KLADFGYQVL | 0.9975 | 0.7128 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:04 | KLADFGYQVL | 0.9973 | 0.8779 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:17 | KLADFGYQVL | 0.9972 | 0.7683 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:27 | KLADFGYQVL | 0.9971 | 0.7384 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:16 | KLADFGYQVL | 0.9963 | 0.6507 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:38 | KLADFGYQVL | 0.9924 | 0.7592 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:35 | KLADFGYQVL | 0.9552 | 0.7492 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:22 | LKLADFGYQV | 0.8896 | 0.6428 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:29 | KLADFGYQVL | 0.8804 | 0.7305 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:20 | KLADFGYQVL | 0.8601 | 0.7309 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:60 | LKLADFGYQV | 0.8509 | 0.6429 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:16 | LKLADFGYQV | 0.8489 | 0.6923 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:30 | LKLADFGYQV | 0.8476 | 0.6335 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:67 | LKLADFGYQV | 0.8476 | 0.6335 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:24 | LKLADFGYQV | 0.8476 | 0.6335 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:11 | LKLADFGYQV | 0.8103 | 0.6586 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:35 | LKLADFGYQV | 0.7312 | 0.6495 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:29 | LKLADFGYQV | 0.7093 | 0.638 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:20 | LKLADFGYQV | 0.7082 | 0.6437 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:27 | LKLADFGYQV | 0.6557 | 0.6894 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:19 | LKLADFGYQV | 0.6428 | 0.6452 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:22 | KLADFGYQVLA | 0.9985 | 0.6587 | 8 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:24 | KLADFGYQVLA | 0.9983 | 0.698 | 8 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:67 | KLADFGYQVLA | 0.9983 | 0.698 | 8 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:30 | KLADFGYQVLA | 0.9983 | 0.698 | 8 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:60 | KLADFGYQVLA | 0.9983 | 0.6973 | 8 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:01 | FGYQVLAPTAY | 0.9968 | 0.9526 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:25 | FGYQVLAPTAY | 0.9848 | 0.9479 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:02 | FGYQVLAPTAY | 0.9713 | 0.9517 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B46:01 | FGYQVLAPTAY | 0.9576 | 0.7761 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:29 | KLADFGYQVLA | 0.8364 | 0.7028 | 8 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:20 | KLADFGYQVLA | 0.8244 | 0.7057 | 8 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C05:09 | LADFGYQV | 1 | 0.9948 | 9 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:15 | ADFGYQVL | 0.9999 | 0.9944 | 10 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:15 | LADFGYQV | 0.9998 | 0.9967 | 9 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:13 | LADFGYQV | 0.9619 | 0.9981 | 9 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:04 | LADFGYQV | 0.9619 | 0.9981 | 9 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:03 | LADFGYQV | 0.9422 | 0.9984 | 9 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:10 | LADFGYQVL | 0.9999 | 0.9768 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:07 | LADFGYQVL | 0.9999 | 0.9738 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:15 | LADFGYQVL | 0.9999 | 0.9955 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C05:09 | LADFGYQVL | 0.9999 | 0.9941 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C01:17 | LADFGYQVL | 0.9997 | 0.9799 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:02 | KLADFGYQV | 0.9995 | 0.6245 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:05 | KLADFGYQV | 0.9994 | 0.7068 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C03:07 | LADFGYQVL | 0.9994 | 0.9939 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:01 | KLADFGYQV | 0.9994 | 0.7521 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:07 | KLADFGYQV | 0.9994 | 0.7804 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C03:19 | LADFGYQVL | 0.9994 | 0.9969 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C03:08 | LADFGYQVL | 0.9988 | 0.9767 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C05:09 | KLADFGYQV | 0.9979 | 0.9925 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C01:30 | LADFGYQVL | 0.9964 | 0.9796 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C15:06 | LADFGYQVL | 0.9961 | 0.985 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:06 | LADFGYQVL | 0.9873 | 0.9899 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:13 | LADFGYQVL | 0.9829 | 0.997 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:04 | LADFGYQVL | 0.9829 | 0.997 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:06 | KLADFGYQV | 0.9727 | 0.9819 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B40:06 | ADFGYQVLA | 0.9487 | 0.958 | 10 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:03 | LADFGYQVL | 0.9292 | 0.9976 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C03:14 | LADFGYQVL | 0.9281 | 0.994 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:14 | LADFGYQVL | 0.9246 | 0.978 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:14 | KLADFGYQV | 0.8656 | 0.9616 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B35:12 | LADFGYQVL | 0.8506 | 0.9882 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C02:06 | LADFGYQVL | 0.7818 | 0.993 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:31 | ELKLADFGY | 0.7616 | 0.7068 | 6 | 15 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C02:06 | KLADFGYQV | 0.6622 | 0.9939 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C05:09 | KLADFGYQVL | 0.9997 | 0.9864 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:05 | KLADFGYQVL | 0.9983 | 0.5924 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:15 | KLADFGYQVL | 0.9982 | 0.9894 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:07 | KLADFGYQVL | 0.9978 | 0.7439 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:01 | KLADFGYQVL | 0.9976 | 0.7249 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:02 | LKLADFGYQV | 0.8891 | 0.5857 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:01 | LKLADFGYQV | 0.8476 | 0.6335 | 7 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:01 | KLADFGYQVLA | 0.9983 | 0.698 | 8 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:07 | FGYQVLAPTAY | 0.9935 | 0.8461 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:05 | FGYQVLAPTAY | 0.9463 | 0.8831 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:31 | FGYQVLAPTAY | 0.9283 | 0.8919 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C05:01 | LADFGYQV | 1 | 0.9948 | 9 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:03 | LADFGYQV | 1 | 0.9809 | 9 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:02 | ADFGYQVL | 0.9999 | 0.9944 | 10 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:02 | LADFGYQV | 0.9998 | 0.9967 | 9 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:01 | LADFGYQV | 0.9422 | 0.9984 | 9 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C01:03 | LADFGYQVL | 0.9999 | 0.9662 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:03 | LADFGYQVL | 0.9999 | 0.9785 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:02 | LADFGYQVL | 0.9999 | 0.9955 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:01 | LADFGYQVL | 0.9999 | 0.9738 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C05:01 | LADFGYQVL | 0.9999 | 0.9941 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C18:01 | LADFGYQVL | 0.9999 | 0.9793 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C01:02 | LADFGYQVL | 0.9997 | 0.9798 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C03:04 | LADFGYQVL | 0.9994 | 0.9959 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C03:03 | LADFGYQVL | 0.9994 | 0.9959 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:14 | KLADFGYQV | 0.9993 | 0.8241 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:06 | KLADFGYQV | 0.9993 | 0.8358 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:03 | KLADFGYQV | 0.9992 | 0.8173 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C03:17 | LADFGYQVL | 0.9988 | 0.9897 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C03:67 | LADFGYQVL | 0.9987 | 0.994 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C03:05 | LADFGYQVL | 0.9987 | 0.9697 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C05:01 | KLADFGYQV | 0.9979 | 0.9925 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:03 | KLADFGYQV | 0.9969 | 0.9577 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C15:05 | LADFGYQVL | 0.9948 | 0.9888 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C03:02 | LADFGYQVL | 0.9907 | 0.99 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C15:02 | KLADFGYQV | 0.9905 | 0.9633 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C15:05 | KLADFGYQV | 0.9883 | 0.9638 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C03:06 | LADFGYQVL | 0.988 | 0.9954 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C18:01 | KLADFGYQV | 0.9864 | 0.9552 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:04 | LADFGYQVL | 0.9803 | 0.9896 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B35:13 | LADFGYQVL | 0.9609 | 0.9766 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C16:01 | LADFGYQVL | 0.955 | 0.9919 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:01 | LADFGYQVL | 0.9292 | 0.9976 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B35:22 | LADFGYQVL | 0.9215 | 0.715 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C04:04 | KLADFGYQV | 0.9132 | 0.9803 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B51:05 | LADFGYQVL | 0.8978 | 0.6636 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C07:04 | LADFGYQVL | 0.8761 | 0.9837 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B35:09 | LADFGYQVL | 0.8506 | 0.9882 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A69:01 | KLADFGYQV | 0.8181 | 0.8617 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B51:06 | LADFGYQVL | 0.8084 | 0.8471 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C17:01 | LADFGYQVL | 0.8028 | 0.9895 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C17:01 | KLADFGYQV | 0.79 | 0.9778 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A32:01 | KLADFGYQV | 0.7335 | 0.9895 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B50:04 | ADFGYQVLA | 0.6091 | 0.9568 | 10 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B50:05 | ADFGYQVLA | 0.6091 | 0.9568 | 10 | 19 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B07:13 | LADFGYQVL | 0.3342 | 0.9051 | 9 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C07:04 | KLADFGYQV | 0.138 | 0.9665 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B40:21 | KLADFGYQV | 0.1271 | 0.7547 | 8 | 17 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C05:01 | KLADFGYQVL | 0.9997 | 0.9864 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:03 | KLADFGYQVL | 0.9985 | 0.7909 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B44:13 | GELKLADFGY | 0.9983 | 0.9407 | 5 | 15 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B44:07 | GELKLADFGY | 0.9983 | 0.9407 | 5 | 15 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B44:26 | GELKLADFGY | 0.9983 | 0.9407 | 5 | 15 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-C08:02 | KLADFGYQVL | 0.9982 | 0.9894 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-A02:14 | KLADFGYQVL | 0.9967 | 0.796 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:73 | KLADFGYQVL | 0.9932 | 0.987 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:30 | KLADFGYQVL | 0.9815 | 0.9738 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B40:21 | KLADFGYQVL | 0.4634 | 0.768 | 8 | 18 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:34 | FGYQVLAPTAY | 0.9968 | 0.9526 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:33 | FGYQVLAPTAY | 0.9968 | 0.9526 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:125 | FGYQVLAPTAY | 0.9968 | 0.9526 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:27 | FGYQVLAPTAY | 0.9964 | 0.9591 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:135 | FGYQVLAPTAY | 0.9959 | 0.969 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:50 | FGYQVLAPTAY | 0.9945 | 0.9491 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:35 | FGYQVLAPTAY | 0.9928 | 0.9641 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:12 | FGYQVLAPTAY | 0.9871 | 0.9616 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:39 | FGYQVLAPTAY | 0.9847 | 0.925 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B15:20 | FGYQVLAPTAY | 0.9514 | 0.8983 | 12 | 23 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | HLA-B35:28 | FGYQVLAPTAY | 0.9321 | 0.9006 | 12 | 23 |
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Potential FusionNeoAntigen Information of CDK14-PUM2 in HLA II |
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CDK14-PUM2_90547039_20483247.msa |
![]() * We used NetMHCIIpan v4.1 (%rank<0.5). |
Fusion gene | Hchr | Hbp | Tgene | Tchr | Tbp | HLA II | FusionNeoAntigen peptide | Neoantigen start (at BP 13) | Neoantigen end (at BP 13) |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | DRB1-1216 | DFGYQVLAPTAYYDQ | 11 | 26 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | DRB1-1216 | ADFGYQVLAPTAYYD | 10 | 25 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | DRB1-1222 | DFGYQVLAPTAYYDQ | 11 | 26 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | DRB1-1222 | ADFGYQVLAPTAYYD | 10 | 25 |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 | DRB1-1222 | LADFGYQVLAPTAYY | 9 | 24 |
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Fusion breakpoint peptide structures of CDK14-PUM2 |
![]() * The minimum length of the amino acid sequence in RoseTTAFold is 14AA. Here, we predicted the 14AA fusion protein breakpoint sequence not the fusion neoantigen peptide, which is shorter than 14 AA. |
File name | BPseq | Hgene | Tgene | Hchr | Hbp | Tchr | Tbp | AAlen |
1907 | ELKLADFGYQVLAP | CDK14 | PUM2 | chr7 | 90547039 | chr2 | 20483247 | 916 |
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Filtering FusionNeoAntigens Through Checking the Interaction with HLAs in 3D of CDK14-PUM2 |
![]() * We used Glide to predict the interaction between HLAs and neoantigens. |
HLA allele | PDB ID | File name | BPseq | Docking score | Glide score |
HLA-B14:02 | 3BVN | 1907 | ELKLADFGYQVLAP | -7.15543 | -7.26883 |
HLA-B14:02 | 3BVN | 1907 | ELKLADFGYQVLAP | -4.77435 | -5.80965 |
HLA-B52:01 | 3W39 | 1907 | ELKLADFGYQVLAP | -6.80875 | -6.92215 |
HLA-B52:01 | 3W39 | 1907 | ELKLADFGYQVLAP | -4.20386 | -5.23916 |
HLA-A11:01 | 4UQ2 | 1907 | ELKLADFGYQVLAP | -7.5194 | -8.5547 |
HLA-A11:01 | 4UQ2 | 1907 | ELKLADFGYQVLAP | -6.9601 | -7.0735 |
HLA-A24:02 | 5HGA | 1907 | ELKLADFGYQVLAP | -7.52403 | -7.63743 |
HLA-A24:02 | 5HGA | 1907 | ELKLADFGYQVLAP | -5.82433 | -6.85963 |
HLA-B27:05 | 6PYJ | 1907 | ELKLADFGYQVLAP | -3.28285 | -4.31815 |
HLA-B44:05 | 3DX8 | 1907 | ELKLADFGYQVLAP | -5.91172 | -6.94702 |
HLA-B44:05 | 3DX8 | 1907 | ELKLADFGYQVLAP | -4.24346 | -4.35686 |
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Vaccine Design for the FusionNeoAntigens of CDK14-PUM2 |
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Fusion gene | Hchr | Hbp | Tchr | Tbp | Start in +/-13AA | End in +/-13AA | FusionNeoAntigen peptide sequence | FusionNeoAntigen RNA sequence |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 10 | 18 | ADFGYQVL | CAGATTTCGGCTATCAAGTACTAG |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 10 | 19 | ADFGYQVLA | CAGATTTCGGCTATCAAGTACTAGCTC |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 12 | 23 | FGYQVLAPTAY | TCGGCTATCAAGTACTAGCTCCAACTGCCTATT |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 5 | 15 | GELKLADFGY | GGGAGTTAAAGCTGGCAGATTTCGGCTATC |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 6 | 15 | ELKLADFGY | AGTTAAAGCTGGCAGATTTCGGCTATC |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 7 | 17 | LKLADFGYQV | TAAAGCTGGCAGATTTCGGCTATCAAGTAC |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 8 | 17 | KLADFGYQV | AGCTGGCAGATTTCGGCTATCAAGTAC |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 8 | 18 | KLADFGYQVL | AGCTGGCAGATTTCGGCTATCAAGTACTAG |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 8 | 19 | KLADFGYQVLA | AGCTGGCAGATTTCGGCTATCAAGTACTAGCTC |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 9 | 17 | LADFGYQV | TGGCAGATTTCGGCTATCAAGTAC |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 9 | 18 | LADFGYQVL | TGGCAGATTTCGGCTATCAAGTACTAG |
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Fusion gene | Hchr | Hbp | Tchr | Tbp | Start in +/-13AA | End in +/-13AA | FusionNeoAntigen peptide | FusionNEoAntigen RNA sequence |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 10 | 25 | ADFGYQVLAPTAYYD | CAGATTTCGGCTATCAAGTACTAGCTCCAACTGCCTATTATGATC |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 11 | 26 | DFGYQVLAPTAYYDQ | ATTTCGGCTATCAAGTACTAGCTCCAACTGCCTATTATGATCAGA |
CDK14-PUM2 | chr7 | 90547039 | chr2 | 20483247 | 9 | 24 | LADFGYQVLAPTAYY | TGGCAGATTTCGGCTATCAAGTACTAGCTCCAACTGCCTATTATG |
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Information of the samples that have these potential fusion neoantigens of CDK14-PUM2 |
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Cancer type | Fusion gene | Hchr | Hbp | Henst | Tchr | Tbp | Tenst | Sample |
STAD | CDK14-PUM2 | chr7 | 90547039 | ENST00000265741 | chr2 | 20483247 | ENST00000319801 | TCGA-CD-A486-01A |
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Potential target of CAR-T therapy development for CDK14-PUM2 |
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![]() * Minus value of BPloci means that the break point is located before the CDS. |
- In-frame and retained 'Transmembrane'. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
![]() * We used DeepLoc 1.0. The order of the X-axis of the barplot is as follows: Entry_ID, Localization, Type, Nucleus, Cytoplasm, Extracellular, Mitochondrion, Cell_membrane, Endoplasmic_reticulum, Plastid, Golgi.apparatus, Lysosome.Vacuole, Peroxisome. Y-axis is the output score of DeepLoc. Clicking the image will open a new tab with a large image. |
Hgene | Hchr | Hbp | Henst | Tgene | Tchr | Tbp | Tenst | DeepLoc result |
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Related Drugs to CDK14-PUM2 |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Drug | Source | PMID |
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Related Diseases to CDK14-PUM2 |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Disease | Source | PMID |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |