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Center for Computational Systems Medicine
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Fusion Gene and Fusion Protein Summary

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Fusion Amino Acid Sequences (multiple BPs and multiple gene isoforms)

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Fusion Protein Breakpoint Sequences - (for the Screening of the FusionNeoAntigens)

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Potential FusionNeoAntigens in HLA I - (netMHCpan v4.1 + deepHLApan v1.1)

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Potential FusionNeoAntigens in HLA II - (netMHCIIpan v4.1)

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Fusion Breakpoint 14 AA Peptide Structure - (RoseTTAFold)

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Filtering FusionNeoAntigens Through Checking the Interaction with HLAs in 3D - (Glide)

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Vaccine Design for the FusionNeoAntigens (RNA/protein sequences)

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Potential target of CAR-T therapy development

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Information on the samples that have these potential fusion neoantigens

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Fusion Protein Targeting Drugs - (Manual Curation)

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Fusion Protein Related diseases - (Manual Curation)

Fusion Protein:DPP4-MTX2

Fusion Gene and Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: DPP4-MTX2
FusionPDB ID: 24021
FusionGDB2.0 ID: 24021
HgeneTgene
Gene symbol

DPP4

MTX2

Gene ID

1803

10651

Gene namedipeptidyl peptidase 4metaxin 2
SynonymsADABP|ADCP2|CD26|DPPIV|TP103-
Cytomap

2q24.2

2q31.1

Type of geneprotein-codingprotein-coding
Descriptiondipeptidyl peptidase 4ADCP-2DPP IVT-cell activation antigen CD26adenosine deaminase complexing protein 2dipeptidyl peptidase IVdipeptidylpeptidase 4dipeptidylpeptidase IV (CD26, adenosine deaminase complexing protein 2)metaxin-2mitochondrial outer membrane import complex protein 2
Modification date2020032220200327
UniProtAcc

P27487

Main function of 5'-partner protein: FUNCTION: Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation (PubMed:10951221, PubMed:10900005, PubMed:11772392, PubMed:17287217). Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC (PubMed:10951221, PubMed:10900005, PubMed:11772392, PubMed:14691230). Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner (PubMed:17287217). Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion (PubMed:11772392). In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM (PubMed:16651416, PubMed:10593948). May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation (PubMed:18708048). When overexpressed, enhanced cell proliferation, a process inhibited by GPC3 (PubMed:17549790). Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones such as brain natriuretic peptide 32 (PubMed:16254193, PubMed:10570924). Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline (PubMed:10593948). {ECO:0000269|PubMed:10570924, ECO:0000269|PubMed:10593948, ECO:0000269|PubMed:10900005, ECO:0000269|PubMed:10951221, ECO:0000269|PubMed:11772392, ECO:0000269|PubMed:14691230, ECO:0000269|PubMed:16254193, ECO:0000269|PubMed:16651416, ECO:0000269|PubMed:17287217, ECO:0000269|PubMed:17549790, ECO:0000269|PubMed:18708048}.; FUNCTION: (Microbial infection) Acts as a receptor for human coronavirus MERS-CoV-2. {ECO:0000269|PubMed:23835475}.

O75431

Main function of 5'-partner protein: FUNCTION: Involved in transport of proteins into the mitochondrion. {ECO:0000269|PubMed:10381257}.
Ensembl transtripts involved in fusion geneENST idsENST00000360534, ENST00000491591, 
ENST00000443241, ENST00000249442, 
ENST00000392529, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score5 X 5 X 4=10011 X 5 X 8=440
# samples 612
** MAII scorelog2(6/100*10)=-0.736965594166206
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(12/440*10)=-1.87446911791614
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Fusion gene context

PubMed: DPP4 [Title/Abstract] AND MTX2 [Title/Abstract] AND fusion [Title/Abstract]

Fusion neoantigen context

PubMed: DPP4 [Title/Abstract] AND MTX2 [Title/Abstract] AND neoantigen [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)DPP4(162929909)-MTX2(177161588), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneDPP4

GO:0001666

response to hypoxia

16670267

HgeneDPP4

GO:0006508

proteolysis

27198182

HgeneDPP4

GO:0008284

positive regulation of cell proliferation

17549790

HgeneDPP4

GO:0010716

negative regulation of extracellular matrix disassembly

16651416

HgeneDPP4

GO:0031295

T cell costimulation

10900005|17287217

HgeneDPP4

GO:0033632

regulation of cell-cell adhesion mediated by integrin

11772392

HgeneDPP4

GO:0042110

T cell activation

7594462

HgeneDPP4

GO:0043542

endothelial cell migration

16651416



check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr2:162929909/chr2:177161588)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonRetention analysis results of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features, are available here.

check buttonFusion gene breakpoints across DPP4 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across MTX2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


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Fusion Amino Acid Sequences


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000360534DPP4chr2162929909-ENST00000249442MTX2chr2177161588+17686555611406281
ENST00000360534DPP4chr2162929909-ENST00000392529MTX2chr2177161588+17616555611406281

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000360534ENST00000249442DPP4chr2162929909-MTX2chr2177161588+0.0003942690.9996057
ENST00000360534ENST00000392529DPP4chr2162929909-MTX2chr2177161588+0.0003860990.99961394

check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.

Get the fusion protein sequences from here.

Fusion protein sequence information is available in the fasta format.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

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Fusion Protein Breakpoint Sequences for DPP4-MTX2

check button +/-13 AA sequence from the breakpoints of the fusion protein sequences.
HgeneHchrHbpTgeneTchrTbpLength(fusion protein)BP in fusion proteinPeptide
DPP4chr2162929909MTX2chr217716158865532IITVPVVLLNKGTAEPWPENATLYQQ

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Potential FusionNeoAntigen Information of DPP4-MTX2 in HLA I

check button Multiple sequence alignments of the potential FusionNeoAntigens per fusion breakpoints. If the MSA is empty, then it means that there were predicted fusion neoantigens in this fusion breakpoint, but those predicted fusion neoantigens were not across the breakpoint, which is not fusion-specific.
DPP4-MTX2_162929909_177161588.msa

check button Potential FusionNeoAntigen Information
* We used NetMHCpan v4.1 (%rank<0.5) and deepHLApan v1.1 (immunogenic score>0.5)
Fusion geneHchrHbpTgeneTchrTbpHLA IFusionNeoAntigen peptideBinding scoreImmunogenic scoreNeoantigen start (at BP 13)Neoantigen end (at BP 13)
DPP4-MTX2chr2162929909chr2177161588655HLA-B35:03TAEPWPENATL0.99710.92781223
DPP4-MTX2chr2162929909chr2177161588655HLA-B35:02TAEPWPENATL0.99270.97381223
DPP4-MTX2chr2162929909chr2177161588655HLA-B35:04TAEPWPENATL0.99270.97381223
DPP4-MTX2chr2162929909chr2177161588655HLA-B81:01TAEPWPENATL0.99260.55411223
DPP4-MTX2chr2162929909chr2177161588655HLA-B35:12TAEPWPENATL0.99270.97381223
DPP4-MTX2chr2162929909chr2177161588655HLA-B07:12TAEPWPENATL0.99020.58011223
DPP4-MTX2chr2162929909chr2177161588655HLA-B39:10TAEPWPENATL0.98970.96441223
DPP4-MTX2chr2162929909chr2177161588655HLA-B42:01TAEPWPENATL0.94550.76071223
DPP4-MTX2chr2162929909chr2177161588655HLA-B15:24LLNKGTAEPW0.99820.975717
DPP4-MTX2chr2162929909chr2177161588655HLA-B35:13TAEPWPENATL0.99660.93471223
DPP4-MTX2chr2162929909chr2177161588655HLA-B35:22TAEPWPENATL0.99330.57611223
DPP4-MTX2chr2162929909chr2177161588655HLA-B35:09TAEPWPENATL0.99270.97381223
DPP4-MTX2chr2162929909chr2177161588655HLA-B55:04TAEPWPENATL0.99180.53541223
DPP4-MTX2chr2162929909chr2177161588655HLA-B67:01TAEPWPENATL0.98870.94121223
DPP4-MTX2chr2162929909chr2177161588655HLA-B51:06TAEPWPENATL0.98750.68271223

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Potential FusionNeoAntigen Information of DPP4-MTX2 in HLA II

check button Multiple sequence alignments of the potential FusionNeoAntigens per fusion breakpoints. If the MSA is empty, then it means that there were predicted fusion neoantigens in this fusion breakpoint, but those predicted fusion neoantigens were not across the breakpoint, which is not fusion-specific.
DPP4-MTX2_162929909_177161588.msa

check button Potential FusionNeoAntigen Information
* We used NetMHCIIpan v4.1 (%rank<0.5).
Fusion geneHchrHbpTgeneTchrTbpHLA IIFusionNeoAntigen peptideNeoantigen start (at BP 13)Neoantigen end (at BP 13)
DPP4-MTX2chr2162929909chr2177161588655DRB1-0802ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0802TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0804ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0804TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0804IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-0804VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-0806ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0806TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0806IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-0808ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0809ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0809TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0810ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0810TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0811ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0812ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0812TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0813ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0813TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0815ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0820ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0820TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0820IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-0820VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-0821ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0821TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0822ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0822TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0822IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-0824ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0824TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0824IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-0828ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0828TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0828IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-0828VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-0830ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0831ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-0831TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-0831IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-0831VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1101ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1101TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1101IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1103ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1103TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1104ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1104TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1104IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1104VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1105ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1105TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1105IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1106ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1106TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1106IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1106VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1108ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1108TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1109ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1109TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1109IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1110ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1110TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1110IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1112ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1112TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1112IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1113ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1113TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1113IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1115ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1115TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1115IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1118ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1118TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1118IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1118VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1119ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1119TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1124ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1124TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1124IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1125ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1125TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1125IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1125VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1127ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1127TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1128ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1128TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1128IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1129ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1129TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1129IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1131ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1131TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1132ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1132TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1132IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1133ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1133TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1133IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1134ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1134TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1134IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1135ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1135TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1135IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1135VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1137ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1137TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1138ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1138TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1138IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1138VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1139ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1139TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1139IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1141ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1141TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1142ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1142TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1142IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1142VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1143ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1143TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1143IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1143VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1144ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1144TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1144IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1144VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1145ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1146ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1146TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1146IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1146VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1147ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1147TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1147IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1147VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1149ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1149TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1149IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1150ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1150TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1150IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1150VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1151ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1151TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1151IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1154ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1154TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1154IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1156ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1156TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1156IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1156VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1157ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1157TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1157IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1157VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1158ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1158TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1158IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1158VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1159ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1159TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1160ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1160TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1160IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1160VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1161ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1161TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1161IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1162ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1162TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1162IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1163ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1163TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1164ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1164TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1166ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1166TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1166IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1167ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1167TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1167IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1167VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1169ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1169TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1172ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1172TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1172IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1174ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1174TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1174IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1175ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1175TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1175IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1176ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1176TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1177ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1177TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1177IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1177VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1178ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1178TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1178IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1178VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1180ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1180TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1181ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1181TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1181IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1183ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1183TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1183IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1183VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1184ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1184TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1184IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1184VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1185ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1185TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1187ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1187TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1188ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1188TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1188IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1188VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1189ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1189TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1190ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1190TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1190IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1191ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1191TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1191IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1192ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1192TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1192IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1192VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1193ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1193TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1194ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1194TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1194IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1195ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1195TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1195IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1196ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1196TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1196IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1204ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1204TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1204IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1209ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1209TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1209IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1220ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1305ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1305TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1305IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1306ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1306TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1306IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1306VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1307ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1307TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1309ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1309TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-13100ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-13100TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1311ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1311TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1311IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1311VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1314ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1314TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1314IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1318ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1318TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1318IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1318VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1321ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1324ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1324TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1326ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1326TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1342ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1342TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1342IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1342VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1344ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1344TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1344IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1346ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1346TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1347ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1347TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1350ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1350TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1350IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1354ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1356ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1356TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1358ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1358TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1360ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1360TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1362ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1362TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1362IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1375ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1377ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1377TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1382ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1382TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1386ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1389ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1402ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1403ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1403TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1406ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1406TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1406IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1409ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1411ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1411TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1412ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1412TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1412IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1412VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1415ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1415TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1415IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1415VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1417ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1417TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1417IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1418ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1420ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1420TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1420IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1421ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1421TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1422ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1422TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1425ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1425TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1427ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1427TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1429ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1429TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1429IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1430ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1431ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1431TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1432ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1432TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1433ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1433TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1434ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1434TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1434IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1437ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1437TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1440ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1440TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1441ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1452ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1452TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1452IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1453ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1453TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1455ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1465ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1465TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1467ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1473ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1473TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1473IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1474ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1474TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1474IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1477ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1477TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1478ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1478TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1480ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1480TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1480IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1481ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1481TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1481IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1483ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1483TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1483IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1484ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB1-1484TVPVVLLNKGTAEPW217
DPP4-MTX2chr2162929909chr2177161588655DRB1-1484IITVPVVLLNKGTAE015
DPP4-MTX2chr2162929909chr2177161588655DRB1-1484VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB1-1494ITVPVVLLNKGTAEP116
DPP4-MTX2chr2162929909chr2177161588655DRB3-0201VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB3-0204VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB3-0214VPVVLLNKGTAEPWP318
DPP4-MTX2chr2162929909chr2177161588655DRB3-0224VPVVLLNKGTAEPWP318

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Fusion breakpoint peptide structures of DPP4-MTX2

check button3D structures of the fusion breakpoint peptide of 14AA sequence that have potential fusion neoantigens
* The minimum length of the amino acid sequence in RoseTTAFold is 14AA. Here, we predicted the 14AA fusion protein breakpoint sequence not the fusion neoantigen peptide, which is shorter than 14 AA.
File nameBPseqHgeneTgeneHchrHbpTchrTbpAAlen
10083VLLNKGTAEPWPENDPP4MTX2chr2162929909chr2177161588655

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Filtering FusionNeoAntigens Through Checking the Interaction with HLAs in 3D of DPP4-MTX2

check buttonVirtual screening between 25 HLAs (from PDB) and FusionNeoAntigens
* We used Glide to predict the interaction between HLAs and neoantigens.
HLA allelePDB IDFile nameBPseqDocking scoreGlide score
HLA-B14:023BVN10083VLLNKGTAEPWPEN-7.9962-8.1096
HLA-B14:023BVN10083VLLNKGTAEPWPEN-5.70842-6.74372
HLA-B52:013W3910083VLLNKGTAEPWPEN-6.83737-6.95077
HLA-B52:013W3910083VLLNKGTAEPWPEN-4.4836-5.5189
HLA-A11:014UQ210083VLLNKGTAEPWPEN-10.0067-10.1201
HLA-A11:014UQ210083VLLNKGTAEPWPEN-9.03915-10.0745
HLA-A24:025HGA10083VLLNKGTAEPWPEN-6.56204-6.67544
HLA-A24:025HGA10083VLLNKGTAEPWPEN-5.42271-6.45801
HLA-B44:053DX810083VLLNKGTAEPWPEN-7.85648-8.89178
HLA-B44:053DX810083VLLNKGTAEPWPEN-5.3978-5.5112
HLA-B35:011A1N10083VLLNKGTAEPWPEN-6.27422-6.38762
HLA-B35:011A1N10083VLLNKGTAEPWPEN-5.27424-6.30954
HLA-A02:016TDR10083VLLNKGTAEPWPEN-3.37154-4.40684

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Vaccine Design for the FusionNeoAntigens of DPP4-MTX2

check button mRNA and peptide sequences of FusionNeoAntigens that have potential interaction with HLA-Is.
Fusion geneHchrHbpTchrTbpStart in +/-13AAEnd in +/-13AAFusionNeoAntigen peptide sequenceFusionNeoAntigen RNA sequence
DPP4-MTX2chr2162929909chr21771615881223TAEPWPENATLGCACTGCAGAACCTTGGCCTGAAAATGCTACAT
DPP4-MTX2chr2162929909chr2177161588717LLNKGTAEPWTTCTGCTGAACAAAGGCACTGCAGAACCTT

check button mRNA and peptide sequences of FusionNeoAntigens that have potential interaction with HLA-IIs.
Fusion geneHchrHbpTchrTbpStart in +/-13AAEnd in +/-13AAFusionNeoAntigen peptideFusionNEoAntigen RNA sequence
DPP4-MTX2chr2162929909chr2177161588015IITVPVVLLNKGTAECCATCATCACCGTGCCCGTGGTTCTGCTGAACAAAGGCACTGCAG
DPP4-MTX2chr2162929909chr2177161588116ITVPVVLLNKGTAEPTCATCACCGTGCCCGTGGTTCTGCTGAACAAAGGCACTGCAGAAC
DPP4-MTX2chr2162929909chr2177161588217TVPVVLLNKGTAEPWTCACCGTGCCCGTGGTTCTGCTGAACAAAGGCACTGCAGAACCTT
DPP4-MTX2chr2162929909chr2177161588318VPVVLLNKGTAEPWPCCGTGCCCGTGGTTCTGCTGAACAAAGGCACTGCAGAACCTTGGC

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Information of the samples that have these potential fusion neoantigens of DPP4-MTX2

check button These samples were reported as having these fusion breakpoints. For individual breakpoints, we checked the open reading frames considering multiple gene isoforms and chose the in-frame fusion genes only. Then, we made fusion protein sequences and predicted the fusion neoantigens. These fusion-positive samples may have these potential fusion neoantigens.
Cancer typeFusion geneHchrHbpHenstTchrTbpTenstSample
Non-CancerDPP4-MTX2chr2162929909ENST00000360534chr2177161588ENST00000249442TCGA-BR-7851-11A

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Potential target of CAR-T therapy development for DPP4-MTX2

check button Predicted 3D structure. We used RoseTTAFold.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, to provide the retention of the transmembrane domain, we only show the protein feature retention information of those transmembrane features


* Minus value of BPloci means that the break point is located before the CDS.
- In-frame and retained 'Transmembrane'.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneDPP4chr2:162929909chr2:177161588ENST00000360534-2267_2831767.0TransmembraneHelical%3B Signal-anchor for type II membrane protein

check button Subcellular localization prediction of the transmembrane domain retained fusion proteins
* We used DeepLoc 1.0. The order of the X-axis of the barplot is as follows: Entry_ID, Localization, Type, Nucleus, Cytoplasm, Extracellular, Mitochondrion, Cell_membrane, Endoplasmic_reticulum, Plastid, Golgi.apparatus, Lysosome.Vacuole, Peroxisome. Y-axis is the output score of DeepLoc. Clicking the image will open a new tab with a large image.
HgeneHchrHbpHenstTgeneTchrTbpTenstDeepLoc result

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Related Drugs to DPP4-MTX2

check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to DPP4-MTX2

check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource