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Center for Computational Systems Medicine
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Fusion Gene and Fusion Protein Summary

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Fusion Amino Acid Sequences (multiple BPs and multiple gene isoforms)

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Fusion Protein Breakpoint Sequences - (for the Screening of the FusionNeoAntigens)

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Potential FusionNeoAntigens in HLA I - (netMHCpan v4.1 + deepHLApan v1.1)

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Potential FusionNeoAntigens in HLA II - (netMHCIIpan v4.1)

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Fusion Breakpoint 14 AA Peptide Structure - (RoseTTAFold)

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Filtering FusionNeoAntigens Through Checking the Interaction with HLAs in 3D - (Glide)

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Vaccine Design for the FusionNeoAntigens (RNA/protein sequences)

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Potential target of CAR-T therapy development

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Information on the samples that have these potential fusion neoantigens

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Fusion Protein Targeting Drugs - (Manual Curation)

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Fusion Protein Related diseases - (Manual Curation)

Fusion Protein:NF1-POLDIP2

Fusion Gene and Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: NF1-POLDIP2
FusionPDB ID: 58697
FusionGDB2.0 ID: 58697
HgeneTgene
Gene symbol

NF1

POLDIP2

Gene ID

4763

26073

Gene nameneurofibromin 1DNA polymerase delta interacting protein 2
SynonymsNFNS|VRNF|WSSPDIP38|POLD4|p38
Cytomap

17q11.2

17q11.2

Type of geneprotein-codingprotein-coding
Descriptionneurofibrominneurofibromatosis 1neurofibromatosis-related protein NF-1truncated neurofibromin 1polymerase delta-interacting protein 238 kDa DNA polymerase delta interaction proteinpolymerase (DNA) delta interacting protein 2polymerase (DNA-directed), delta interacting protein 2polymerase delta interacting protein 38
Modification date2020032220200327
UniProtAcc

P21359

Main function of 5'-partner protein: FUNCTION: Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity. {ECO:0000269|PubMed:2121371, ECO:0000269|PubMed:8417346}.
.
Ensembl transtripts involved in fusion geneENST idsENST00000356175, ENST00000358273, 
ENST00000417592, ENST00000431387, 
ENST00000444181, ENST00000581113, 
ENST00000003607, ENST00000540200, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score47 X 26 X 21=256624 X 5 X 4=80
# samples 695
** MAII scorelog2(69/25662*10)=-5.21689344093196
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(5/80*10)=-0.678071905112638
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Fusion gene context

PubMed: NF1 [Title/Abstract] AND POLDIP2 [Title/Abstract] AND fusion [Title/Abstract]

Fusion neoantigen context

PubMed: NF1 [Title/Abstract] AND POLDIP2 [Title/Abstract] AND neoantigen [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)NF1(29592357)-POLDIP2(26682902), # samples:2
Anticipated loss of major functional domain due to fusion event.NF1-POLDIP2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
NF1-POLDIP2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
NF1-POLDIP2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
NF1-POLDIP2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneNF1

GO:0043547

positive regulation of GTPase activity

2121371



check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr17:29592357/chr17:26682902)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonRetention analysis results of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features, are available here.

check buttonFusion gene breakpoints across NF1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across POLDIP2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


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Fusion Amino Acid Sequences


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000356175NF1chr1729592357+ENST00000540200POLDIP2chr1726682902-7585515525461001948
ENST00000358273NF1chr1729592357+ENST00000540200POLDIP2chr1726682902-7648521825461631969

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000356175ENST00000540200NF1chr1729592357+POLDIP2chr1726682902-0.0007452970.99925464
ENST00000358273ENST00000540200NF1chr1729592357+POLDIP2chr1726682902-0.0007052810.99929464

check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.

Get the fusion protein sequences from here.

Fusion protein sequence information is available in the fasta format.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

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Fusion Protein Breakpoint Sequences for NF1-POLDIP2

check button +/-13 AA sequence from the breakpoints of the fusion protein sequences.
HgeneHchrHbpTgeneTchrTbpLength(fusion protein)BP in fusion proteinPeptide
NF1chr1729592357POLDIP2chr172668290251551633SKAGNPIFYYVARRNRPEGKVLETVG
NF1chr1729592357POLDIP2chr172668290252181654SKAGNPIFYYVARRNRPEGKVLETVG

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Potential FusionNeoAntigen Information of NF1-POLDIP2 in HLA I

check button Multiple sequence alignments of the potential FusionNeoAntigens per fusion breakpoints. If the MSA is empty, then it means that there were predicted fusion neoantigens in this fusion breakpoint, but those predicted fusion neoantigens were not across the breakpoint, which is not fusion-specific.
NF1-POLDIP2_29592357_26682902.msa

check button Potential FusionNeoAntigen Information
* We used NetMHCpan v4.1 (%rank<0.5) and deepHLApan v1.1 (immunogenic score>0.5)
Fusion geneHchrHbpTgeneTchrTbpHLA IFusionNeoAntigen peptideBinding scoreImmunogenic scoreNeoantigen start (at BP 13)Neoantigen end (at BP 13)
NF1-POLDIP2chr1729592357chr17266829025155HLA-A31:02FYYVARRNR0.86190.5151716
NF1-POLDIP2chr1729592357chr17266829025155HLA-B27:04RRNRPEGKVL0.9990.77841222
NF1-POLDIP2chr1729592357chr17266829025155HLA-B27:07RRNRPEGKVL0.99790.53771222
NF1-POLDIP2chr1729592357chr17266829025155HLA-B27:10ARRNRPEGK0.92810.82451120
NF1-POLDIP2chr1729592357chr17266829025155HLA-B27:10RRNRPEGKVL0.99910.87141222
NF1-POLDIP2chr1729592357chr17266829025155HLA-B27:08RRNRPEGKVL0.9990.57691222
NF1-POLDIP2chr1729592357chr17266829025155HLA-B27:06RRNRPEGKVL0.99860.81951222
NF1-POLDIP2chr1729592357chr17266829025155HLA-B27:09RRNRPEGKVL0.99780.64761222
NF1-POLDIP2chr1729592357chr17266829025155HLA-C07:01RRNRPEGKVL0.99220.79971222
NF1-POLDIP2chr1729592357chr17266829025155HLA-C07:22RRNRPEGKVL0.97940.82121222

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Potential FusionNeoAntigen Information of NF1-POLDIP2 in HLA II

check button Multiple sequence alignments of the potential FusionNeoAntigens per fusion breakpoints. If the MSA is empty, then it means that there were predicted fusion neoantigens in this fusion breakpoint, but those predicted fusion neoantigens were not across the breakpoint, which is not fusion-specific.
NF1-POLDIP2_29592357_26682902.msa

check button Potential FusionNeoAntigen Information
* We used NetMHCIIpan v4.1 (%rank<0.5).
Fusion geneHchrHbpTgeneTchrTbpHLA IIFusionNeoAntigen peptideNeoantigen start (at BP 13)Neoantigen end (at BP 13)
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0473GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0801PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0801NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0801IFYYVARRNRPEGKV621
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0802PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0802NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0803PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0803NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0803GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0805PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0805NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0808PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0808NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0809PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0809NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0811PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0811NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0813NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0813PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0813GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0814PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0814NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0814GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0815NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0815PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0815GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0816PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0816NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0816IFYYVARRNRPEGKV621
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0821PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0821NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0823PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0823NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0823GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0824PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0824NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0826PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0826NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0826IFYYVARRNRPEGKV621
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0827PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0827NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0827GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0829PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0829NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0830NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0830PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0830GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0832NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0832GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0833PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0833NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0833GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0835PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0835NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0835GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0836PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0836NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0836GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0837NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0837PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0837GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0838PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0838NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0838GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0839PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0839NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0839IFYYVARRNRPEGKV621
NF1-POLDIP2chr1729592357chr17266829025155DRB1-0840PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1101NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1101PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1101GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1105NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1105PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1105GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1108NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1108PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1108GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1108AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1109NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1109PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1109GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1110NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1110PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1110GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1111NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1111GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1111PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1111AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1112NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1112PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1112GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1114NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1114GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1114PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1114AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1115NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1115PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1115GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1119NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1119GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1119PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1119AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1120NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1120GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1120PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1120AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1124NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1124PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1124GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1127NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1127PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1127GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1128NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1128PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1128GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1129NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1129PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1129GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1130PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1131NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1131GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1131PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1131AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1132NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1132PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1132GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1133NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1133PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1133GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1137PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1137NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1139NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1139PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1139GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1145NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1145PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1145GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1145AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1149NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1149PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1149GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1151NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1151PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1151GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1153NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1153PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1153GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1155GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1155NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1161NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1161PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1161GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1162NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1162PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1162GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1164NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1164GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1164PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1164AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1166NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1166PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1166GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1168NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1168GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1168PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1168AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1169NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1169PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1169GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1169AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1170GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1172NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1172GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1172PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1172AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1173NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1173GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1173PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1173AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1174NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1174PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1174GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1175NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1175PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1175GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1179NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1179PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1179GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1180NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1180PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1180GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1181NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1181PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1181GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1182NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1182GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1182PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1182AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1186NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1186GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1186PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1186AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1187NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1187PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1187GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1190NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1190PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1190GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1191NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1191PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1191GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1193NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1193PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1193GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1194NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1194PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1194GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1195NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1195PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1195GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1196NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1196PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1196GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1302NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1302GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1302PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1302AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1305NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1305PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1305GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1307PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1307NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-13100NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-13100PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-13101NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-13101PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-13101GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1310NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1310PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1310GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1313PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1313NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1313GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1314NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1314PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1314GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1315GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1315NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1316NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1316GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1316PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1316AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1317GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1317NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1319GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1319NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1321NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1321PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1323NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1323GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1323PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1323AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1326NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1326PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1326GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1329NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1329GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1329PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1329AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1330NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1330GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1330PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1331NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1331GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1331PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1333NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1334NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1334GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1334PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1334AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1336NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1336GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1336PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1336AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1337NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1337PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1337GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1338NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1338PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1338GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1338AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1339NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1339GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1339PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1339AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1341NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1341GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1341PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1341AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1346NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1346PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1347PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1347NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1347GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1349NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1349PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1350NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1350PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1350GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1353GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1353NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1355PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1355NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1356NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1356PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1356GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1356AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1357GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1357NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1360NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1360PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1360GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1361NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1362NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1362PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1362GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1363NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1363GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1363PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1363AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1365NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1365PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1365GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1365AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1366NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1366GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1366PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1367NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1367PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1367GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1367IFYYVARRNRPEGKV621
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1367AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1373NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1373GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1373PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1373AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1374NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1374GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1374PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1374AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1376NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1376GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1382NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1382GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1382PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1382AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1385NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1385PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1385GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1385AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1386NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1386GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1386PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1386AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1388PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1388NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1396NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1396GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1396PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1396AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1397NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1397GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1397PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1397AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1399NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1399GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1399PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1399AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1402NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1402GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1402PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1403NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1403PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1403GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1403AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1409NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1409PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1413NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1413PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1413GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1414NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1414PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1414GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1419NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1419PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1419GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1422PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1422NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1424NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1424GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1424PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1424AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1425PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1425NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1427NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1427PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1427GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1430NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1430GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1430PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1436NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1436PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1436GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1440NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1440PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1440GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1440AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1441NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1441GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1441PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1442NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1442GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1442PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1442AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1444NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1444PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1444GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1447NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1449NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1451NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1451PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1451GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1453NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1453PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1453GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1457GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1463NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1463PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1463GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1463IFYYVARRNRPEGKV621
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1467NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1467PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1467GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1467AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1467IFYYVARRNRPEGKV621
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1469NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1469PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1477NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1477PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1477GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1477AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1485NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1485PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1485GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1485IFYYVARRNRPEGKV621
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1489NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1489GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1489PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1494NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1494GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1494PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1498NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1498GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1498PIFYYVARRNRPEGK520
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1498AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1501GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1501AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1502GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1503GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1503AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1504GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1504AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1504NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1504KAGNPIFYYVARRNR116
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1505GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1505AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1506GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1506AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1507GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1507AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1508GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1509GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1509AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1510GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1510AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1510NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1510KAGNPIFYYVARRNR116
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1511GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1512GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1512AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1513GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1513AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1514GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1515GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1515AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1516GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1516AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1518GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1518AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1518NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1519GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1520GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1520AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1521GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1521AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1521NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1521KAGNPIFYYVARRNR116
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1522GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1522AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1523GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1523AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1524GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1524AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1526GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1528GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1528AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1530GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1531GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1532GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1532AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1533GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1533AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1535GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1535AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1536GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1536AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1537GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1537AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1538GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1539GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1540GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1540AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1541GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1541AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1542GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1542AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1543GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1543AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1544GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1545GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1545AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1546GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1546AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1547GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1548GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1548AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1549GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB1-1549AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0102GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0103GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0103AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0103NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0106GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0106AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0108NGNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0111GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0111AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0202GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0202AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0202NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0202KAGNPIFYYVARRNR116
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0203GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0203AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0203NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0203KAGNPIFYYVARRNR116
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0204GNPIFYYVARRNRPE318
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0204AGNPIFYYVARRNRP217
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0204NPIFYYVARRNRPEG419
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0204KAGNPIFYYVARRNR116
NF1-POLDIP2chr1729592357chr17266829025155DRB5-0205GNPIFYYVARRNRPE318

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Fusion breakpoint peptide structures of NF1-POLDIP2

check button3D structures of the fusion breakpoint peptide of 14AA sequence that have potential fusion neoantigens
* The minimum length of the amino acid sequence in RoseTTAFold is 14AA. Here, we predicted the 14AA fusion protein breakpoint sequence not the fusion neoantigen peptide, which is shorter than 14 AA.
File nameBPseqHgeneTgeneHchrHbpTchrTbpAAlen
3680IFYYVARRNRPEGKNF1POLDIP2chr1729592357chr17266829025155

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Filtering FusionNeoAntigens Through Checking the Interaction with HLAs in 3D of NF1-POLDIP2

check buttonVirtual screening between 25 HLAs (from PDB) and FusionNeoAntigens
* We used Glide to predict the interaction between HLAs and neoantigens.
HLA allelePDB IDFile nameBPseqDocking scoreGlide score
HLA-B14:023BVN3680IFYYVARRNRPEGK-7.9962-8.1096
HLA-B14:023BVN3680IFYYVARRNRPEGK-5.70842-6.74372
HLA-B52:013W393680IFYYVARRNRPEGK-6.83737-6.95077
HLA-B52:013W393680IFYYVARRNRPEGK-4.4836-5.5189
HLA-A11:014UQ23680IFYYVARRNRPEGK-10.0067-10.1201
HLA-A11:014UQ23680IFYYVARRNRPEGK-9.03915-10.0745
HLA-A24:025HGA3680IFYYVARRNRPEGK-6.56204-6.67544
HLA-A24:025HGA3680IFYYVARRNRPEGK-5.42271-6.45801
HLA-B44:053DX83680IFYYVARRNRPEGK-7.85648-8.89178
HLA-B44:053DX83680IFYYVARRNRPEGK-5.3978-5.5112
HLA-A02:016TDR3680IFYYVARRNRPEGK-3.37154-4.40684

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Vaccine Design for the FusionNeoAntigens of NF1-POLDIP2

check button mRNA and peptide sequences of FusionNeoAntigens that have potential interaction with HLA-Is.
Fusion geneHchrHbpTchrTbpStart in +/-13AAEnd in +/-13AAFusionNeoAntigen peptide sequenceFusionNeoAntigen RNA sequence
NF1-POLDIP2chr1729592357chr17266829021120ARRNRPEGKACGGAGAAACCGACCAGAGGGCAAAGT
NF1-POLDIP2chr1729592357chr17266829021222RRNRPEGKVLGAGAAACCGACCAGAGGGCAAAGTGTTGGA
NF1-POLDIP2chr1729592357chr1726682902716FYYVARRNRTTATTATGTTGCACGGAGAAACCGACC

check button mRNA and peptide sequences of FusionNeoAntigens that have potential interaction with HLA-IIs.
Fusion geneHchrHbpTchrTbpStart in +/-13AAEnd in +/-13AAFusionNeoAntigen peptideFusionNEoAntigen RNA sequence
NF1-POLDIP2chr1729592357chr1726682902116KAGNPIFYYVARRNRAGCTGGGAATCCTATTTTTTATTATGTTGCACGGAGAAACCGACC
NF1-POLDIP2chr1729592357chr1726682902217AGNPIFYYVARRNRPTGGGAATCCTATTTTTTATTATGTTGCACGGAGAAACCGACCAGA
NF1-POLDIP2chr1729592357chr1726682902318GNPIFYYVARRNRPEGAATCCTATTTTTTATTATGTTGCACGGAGAAACCGACCAGAGGG
NF1-POLDIP2chr1729592357chr1726682902419NPIFYYVARRNRPEGTCCTATTTTTTATTATGTTGCACGGAGAAACCGACCAGAGGGCAA
NF1-POLDIP2chr1729592357chr1726682902520PIFYYVARRNRPEGKTATTTTTTATTATGTTGCACGGAGAAACCGACCAGAGGGCAAAGT
NF1-POLDIP2chr1729592357chr1726682902621IFYYVARRNRPEGKVTTTTTATTATGTTGCACGGAGAAACCGACCAGAGGGCAAAGTGTT

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Information of the samples that have these potential fusion neoantigens of NF1-POLDIP2

check button These samples were reported as having these fusion breakpoints. For individual breakpoints, we checked the open reading frames considering multiple gene isoforms and chose the in-frame fusion genes only. Then, we made fusion protein sequences and predicted the fusion neoantigens. These fusion-positive samples may have these potential fusion neoantigens.
Cancer typeFusion geneHchrHbpHenstTchrTbpTenstSample
COADNF1-POLDIP2chr1729592357ENST00000356175chr1726682902ENST00000540200TCGA-AZ-6600-01A

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Potential target of CAR-T therapy development for NF1-POLDIP2

check button Predicted 3D structure. We used RoseTTAFold.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, to provide the retention of the transmembrane domain, we only show the protein feature retention information of those transmembrane features


* Minus value of BPloci means that the break point is located before the CDS.
- In-frame and retained 'Transmembrane'.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

check button Subcellular localization prediction of the transmembrane domain retained fusion proteins
* We used DeepLoc 1.0. The order of the X-axis of the barplot is as follows: Entry_ID, Localization, Type, Nucleus, Cytoplasm, Extracellular, Mitochondrion, Cell_membrane, Endoplasmic_reticulum, Plastid, Golgi.apparatus, Lysosome.Vacuole, Peroxisome. Y-axis is the output score of DeepLoc. Clicking the image will open a new tab with a large image.
HgeneHchrHbpHenstTgeneTchrTbpTenstDeepLoc result

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Related Drugs to NF1-POLDIP2

check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to NF1-POLDIP2

check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneNF1C0027831Neurofibromatosis 144CTD_human;GENOMICS_ENGLAND;UNIPROT
HgeneNF1C1708353Hereditary Paraganglioma-Pheochromocytoma Syndrome10CLINGEN
HgeneNF1C0349639Juvenile Myelomonocytic Leukemia7CTD_human;GENOMICS_ENGLAND;ORPHANET
HgeneNF1C2931482Neurofibromatosis-Noonan syndrome6CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
HgeneNF1C0553586Cafe-au-lait macules with pulmonary stenosis5CTD_human;GENOMICS_ENGLAND;ORPHANET
HgeneNF1C0162678Neurofibromatoses3CGI;CTD_human;GENOMICS_ENGLAND
HgeneNF1C0004114Astrocytoma2CTD_human
HgeneNF1C0023467Leukemia, Myelocytic, Acute2CTD_human
HgeneNF1C0025202melanoma2CGI;CTD_human
HgeneNF1C0026998Acute Myeloid Leukemia, M12CTD_human
HgeneNF1C0205768Subependymal Giant Cell Astrocytoma2CTD_human
HgeneNF1C0206727Nerve Sheath Tumors2CTD_human
HgeneNF1C0280783Juvenile Pilocytic Astrocytoma2CTD_human
HgeneNF1C0280785Diffuse Astrocytoma2CTD_human
HgeneNF1C0334579Anaplastic astrocytoma2CTD_human
HgeneNF1C0334580Protoplasmic astrocytoma2CTD_human
HgeneNF1C0334581Gemistocytic astrocytoma2CTD_human
HgeneNF1C0334582Fibrillary Astrocytoma2CTD_human
HgeneNF1C0334583Pilocytic Astrocytoma2CTD_human
HgeneNF1C0338070Childhood Cerebral Astrocytoma2CTD_human
HgeneNF1C0547065Mixed oligoastrocytoma2CTD_human
HgeneNF1C0750935Cerebral Astrocytoma2CTD_human
HgeneNF1C0750936Intracranial Astrocytoma2CTD_human
HgeneNF1C0751689Peripheral Nerve Sheath Neoplasm2CTD_human
HgeneNF1C0751691Perineurioma2CTD_human
HgeneNF1C1704230Grade I Astrocytoma2CTD_human
HgeneNF1C1834235NEUROFIBROMATOSIS, FAMILIAL SPINAL2CTD_human;GENOMICS_ENGLAND;UNIPROT
HgeneNF1C1879321Acute Myeloid Leukemia (AML-M2)2CTD_human
HgeneNF1C0001430Adenoma1CTD_human
HgeneNF1C0004352Autistic Disorder1CTD_human
HgeneNF1C0016057Fibrosarcoma1CTD_human
HgeneNF1C0017636Glioblastoma1CTD_human
HgeneNF1C0017638Glioma1CGI;CTD_human
HgeneNF1C0020796Profound Mental Retardation1CTD_human
HgeneNF1C0023186Learning Disorders1CTD_human
HgeneNF1C0023827liposarcoma1CTD_human
HgeneNF1C0025363Mental Retardation, Psychosocial1CTD_human
HgeneNF1C0026654Moyamoya Disease1GENOMICS_ENGLAND
HgeneNF1C0027809Neurilemmoma1CTD_human
HgeneNF1C0027830neurofibroma1CTD_human
HgeneNF1C0027962Melanocytic nevus1CTD_human
HgeneNF1C0028326Noonan Syndrome1GENOMICS_ENGLAND
HgeneNF1C0031511Pheochromocytoma1CTD_human
HgeneNF1C0035320Retinal Neovascularization1CTD_human
HgeneNF1C0205646Adenoma, Basal Cell1CTD_human
HgeneNF1C0205647Follicular adenoma1CTD_human
HgeneNF1C0205648Adenoma, Microcystic1CTD_human
HgeneNF1C0205649Adenoma, Monomorphic1CTD_human
HgeneNF1C0205650Papillary adenoma1CTD_human
HgeneNF1C0205651Adenoma, Trabecular1CTD_human
HgeneNF1C0205824Liposarcoma, Dedifferentiated1CTD_human
HgeneNF1C0205825Liposarcoma, Pleomorphic1CTD_human
HgeneNF1C0205944Sarcoma, Epithelioid1CTD_human
HgeneNF1C0205945Sarcoma, Spindle Cell1CTD_human
HgeneNF1C0259783mixed gliomas1CTD_human
HgeneNF1C0334588Giant Cell Glioblastoma1CTD_human
HgeneNF1C0555198Malignant Glioma1CTD_human
HgeneNF1C0751262Adult Learning Disorders1CTD_human
HgeneNF1C0751263Learning Disturbance1CTD_human
HgeneNF1C0751265Learning Disabilities1CTD_human
HgeneNF1C0751374Schwannomatosis, Plexiform1CTD_human
HgeneNF1C0917816Mental deficiency1CTD_human
HgeneNF1C0917817Neurofibromatosis 31CTD_human
HgeneNF1C1257877Pheochromocytoma, Extra-Adrenal1CTD_human
HgeneNF1C1261473Sarcoma1CTD_human
HgeneNF1C1330966Developmental Academic Disorder1CTD_human
HgeneNF1C1370889Liposarcoma, well differentiated1CTD_human
HgeneNF1C1621958Glioblastoma Multiforme1CTD_human
HgeneNF1C3150928NF1 Microdeletion Syndrome1ORPHANET
HgeneNF1C3714756Intellectual Disability1CTD_human