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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>100162_100162_1_YWHAE-TXLNB_YWHAE_chr17_1303341_ENST00000264335_TXLNB_chr6_139569046_ENST00000358430_length(amino acids)=353AA_BP=28
MPEPLPLWMIERIWCTRRSWPSRLSDTTLTLYSGRFEEFQSTLTKSNEVFATFKQEMDKTTKKMKKLEKDTATWKARFENCNKALLDMIE
EKALRAKEYECFVMKIGRLENLCRALQEERNELHKKIRDAEISEKDDQSQHNSDEEPESNVSVDQEIDAEEVNSVQTAVKNLATAFMIIH
HPESTPHQSKETQPEIGSSQESADAALKEPEQPPLIPSRDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAETQCEGLPVGAQADQ

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>100162_100162_2_YWHAE-TXLNB_YWHAE_chr17_1303341_ENST00000573026_TXLNB_chr6_139569046_ENST00000358430_length(amino acids)=353AA_BP=28
MPEPLPLWMIERIWCTRRSWPSRLSDTTLTLYSGRFEEFQSTLTKSNEVFATFKQEMDKTTKKMKKLEKDTATWKARFENCNKALLDMIE
EKALRAKEYECFVMKIGRLENLCRALQEERNELHKKIRDAEISEKDDQSQHNSDEEPESNVSVDQEIDAEEVNSVQTAVKNLATAFMIIH
HPESTPHQSKETQPEIGSSQESADAALKEPEQPPLIPSRDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAETQCEGLPVGAQADQ

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>100162_100162_3_YWHAE-TXLNB_YWHAE_chr17_1303341_ENST00000575977_TXLNB_chr6_139569046_ENST00000358430_length(amino acids)=353AA_BP=28
MPEPLPLWMIERIWCTRRSWPSRLSDTTLTLYSGRFEEFQSTLTKSNEVFATFKQEMDKTTKKMKKLEKDTATWKARFENCNKALLDMIE
EKALRAKEYECFVMKIGRLENLCRALQEERNELHKKIRDAEISEKDDQSQHNSDEEPESNVSVDQEIDAEEVNSVQTAVKNLATAFMIIH
HPESTPHQSKETQPEIGSSQESADAALKEPEQPPLIPSRDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAETQCEGLPVGAQADQ

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