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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>103061_103061_1_ZNF844-CMSS1_ZNF844_chr19_12184972_ENST00000439326_CMSS1_chr3_99865817_ENST00000421999_length(amino acids)=313AA_BP=55
MLWTWESPESQEMDLVAFEDVAVNFTQEEWSLLDPSQKNLYREVMQETLRNLASIEASDGEGEGDTEVMQQETVPVPVPSEKTKQPKECF
LIQPKERKENTTKTRKRRKKKITDVLAKSEPKPGLPEDLQKLMKDYYSSRRLVIELEELNLPDSCFLKANDLTHSLSSYLKEICPKWVKL
RKNHSEKKSVLMLIICSSAVRALELIRSMTAFRGDGKVIKLFAKHIKVQAQVKLLEKRVVHLGVGTPGRIKELVKQGGLNLSPLKFLVFD

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>103061_103061_2_ZNF844-CMSS1_ZNF844_chr19_12184972_ENST00000441304_CMSS1_chr3_99865817_ENST00000421999_length(amino acids)=313AA_BP=55
MLWTWESPESQEMDLVAFEDVAVNFTQEEWSLLDPSQKNLYREVMQETLRNLASIEASDGEGEGDTEVMQQETVPVPVPSEKTKQPKECF
LIQPKERKENTTKTRKRRKKKITDVLAKSEPKPGLPEDLQKLMKDYYSSRRLVIELEELNLPDSCFLKANDLTHSLSSYLKEICPKWVKL
RKNHSEKKSVLMLIICSSAVRALELIRSMTAFRGDGKVIKLFAKHIKVQAQVKLLEKRVVHLGVGTPGRIKELVKQGGLNLSPLKFLVFD

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