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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>11171_11171_1_C19orf25-KLF2_C19orf25_chr19_1478771_ENST00000586564_KLF2_chr19_16437665_ENST00000248071_length(amino acids)=200AA_BP=
MQNFLIKKKTNPAKSYKNEPGSPKMPTCLSMYSNTIFVSHYIQYYKKCRRQYKLRPLFLTRHHKPRSSSVDPVGEKMPLKLLHHFEKQNS
SRRIVVFSHRAFSHRRGLGWWRRRRRHRGRPSVATLCPARFSGSNKYQSQFGRGPRPARGTRHGRAQVGGGVPATCAVSCAAPGDRSARR

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>11171_11171_2_C19orf25-KLF2_C19orf25_chr19_1478771_ENST00000586564_KLF2_chr19_16437665_ENST00000592003_length(amino acids)=166AA_BP=113
MSQTLKPWPPCFWAEGGSGPGASSEGRDRAGFPGSGTATGAYEFAGREEQPGQGRRGGRPGQRPLPRLQRWAPRQRSACCCPPAQRPPRW

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>11171_11171_3_C19orf25-KLF2_C19orf25_chr19_1478771_ENST00000588849_KLF2_chr19_16437665_ENST00000248071_length(amino acids)=200AA_BP=
MQNFLIKKKTNPAKSYKNEPGSPKMPTCLSMYSNTIFVSHYIQYYKKCRRQYKLRPLFLTRHHKPRSSSVDPVGEKMPLKLLHHFEKQNS
SRRIVVFSHRAFSHRRGLGWWRRRRRHRGRPSVATLCPARFSGSNKYQSQFGRGPRPARGTRHGRAQVGGGVPATCAVSCAAPGDRSARR

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>11171_11171_4_C19orf25-KLF2_C19orf25_chr19_1478771_ENST00000588849_KLF2_chr19_16437665_ENST00000592003_length(amino acids)=101AA_BP=36
MGSKAKKRVLLPTRPAPPTVEQILEDVRGAPAEDPVFTILAPEGEKPYHCNWDGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRS

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>11171_11171_5_C19orf25-KLF2_C19orf25_chr19_1478771_ENST00000592872_KLF2_chr19_16437665_ENST00000248071_length(amino acids)=200AA_BP=
MQNFLIKKKTNPAKSYKNEPGSPKMPTCLSMYSNTIFVSHYIQYYKKCRRQYKLRPLFLTRHHKPRSSSVDPVGEKMPLKLLHHFEKQNS
SRRIVVFSHRAFSHRRGLGWWRRRRRHRGRPSVATLCPARFSGSNKYQSQFGRGPRPARGTRHGRAQVGGGVPATCAVSCAAPGDRSARR

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>11171_11171_6_C19orf25-KLF2_C19orf25_chr19_1478771_ENST00000592872_KLF2_chr19_16437665_ENST00000592003_length(amino acids)=101AA_BP=36
MGSKAKKRVLLPTRPAPPTVEQILEDVRGAPAEDPVFTILAPEGEKPYHCNWDGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRS

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