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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>11177_11177_1_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000586564_TJP3_chr19_3750135_ENST00000262968_length(amino acids)=162AA_BP=112
MSQTLKPWPPCFWAEGGSGPGASSEGRDRAGFPGSGTATGAYEFAGREEQPGQGRRGGRPGQRPLPRLQRWAPRQRSACCCPPAQRPPRW

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>11177_11177_2_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000586564_TJP3_chr19_3750135_ENST00000382008_length(amino acids)=162AA_BP=112
MSQTLKPWPPCFWAEGGSGPGASSEGRDRAGFPGSGTATGAYEFAGREEQPGQGRRGGRPGQRPLPRLQRWAPRQRSACCCPPAQRPPRW

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>11177_11177_3_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000586564_TJP3_chr19_3750135_ENST00000539908_length(amino acids)=162AA_BP=112
MSQTLKPWPPCFWAEGGSGPGASSEGRDRAGFPGSGTATGAYEFAGREEQPGQGRRGGRPGQRPLPRLQRWAPRQRSACCCPPAQRPPRW

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>11177_11177_4_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000586564_TJP3_chr19_3750135_ENST00000541714_length(amino acids)=162AA_BP=112
MSQTLKPWPPCFWAEGGSGPGASSEGRDRAGFPGSGTATGAYEFAGREEQPGQGRRGGRPGQRPLPRLQRWAPRQRSACCCPPAQRPPRW

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>11177_11177_5_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000586564_TJP3_chr19_3750135_ENST00000587686_length(amino acids)=162AA_BP=112
MSQTLKPWPPCFWAEGGSGPGASSEGRDRAGFPGSGTATGAYEFAGREEQPGQGRRGGRPGQRPLPRLQRWAPRQRSACCCPPAQRPPRW

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>11177_11177_6_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000586564_TJP3_chr19_3750135_ENST00000589378_length(amino acids)=162AA_BP=112
MSQTLKPWPPCFWAEGGSGPGASSEGRDRAGFPGSGTATGAYEFAGREEQPGQGRRGGRPGQRPLPRLQRWAPRQRSACCCPPAQRPPRW

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>11177_11177_7_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000588849_TJP3_chr19_3750135_ENST00000262968_length(amino acids)=68AA_BP=17

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>11177_11177_8_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000588849_TJP3_chr19_3750135_ENST00000382008_length(amino acids)=94AA_BP=1
MFIKDQAEGGKVVGSVWETESQPQGGRRRTDQLAAFERSQVSGRTPVIAVFIGGLRIMYSHKLFLQGFPFIGSHAVLSPLSLGVAAVHLP

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>11177_11177_9_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000588849_TJP3_chr19_3750135_ENST00000539908_length(amino acids)=94AA_BP=1
MFIKDQAEGGKVVGSVWETESQPQGGRRRTDQLAAFERSQVSGRTPVIAVFIGGLRIMYSHKLFLQGFPFIGSHAVLSPLSLGVAAVHLP

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>11177_11177_10_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000588849_TJP3_chr19_3750135_ENST00000541714_length(amino acids)=94AA_BP=1
MFIKDQAEGGKVVGSVWETESQPQGGRRRTDQLAAFERSQVSGRTPVIAVFIGGLRIMYSHKLFLQGFPFIGSHAVLSPLSLGVAAVHLP

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>11177_11177_11_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000588849_TJP3_chr19_3750135_ENST00000587686_length(amino acids)=94AA_BP=1
MFIKDQAEGGKVVGSVWETESQPQGGRRRTDQLAAFERSQVSGRTPVIAVFIGGLRIMYSHKLFLQGFPFIGSHAVLSPLSLGVAAVHLP

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>11177_11177_12_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000588849_TJP3_chr19_3750135_ENST00000589378_length(amino acids)=94AA_BP=1
MFIKDQAEGGKVVGSVWETESQPQGGRRRTDQLAAFERSQVSGRTPVIAVFIGGLRIMYSHKLFLQGFPFIGSHAVLSPLSLGVAAVHLP

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>11177_11177_13_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000592872_TJP3_chr19_3750135_ENST00000262968_length(amino acids)=82AA_BP=0

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>11177_11177_14_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000592872_TJP3_chr19_3750135_ENST00000382008_length(amino acids)=94AA_BP=1
MFIKDQAEGGKVVGSVWETESQPQGGRRRTDQLAAFERSQVSGRTPVIAVFIGGLRIMYSHKLFLQGFPFIGSHAVLSPLSLGVAAVHLP

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>11177_11177_15_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000592872_TJP3_chr19_3750135_ENST00000539908_length(amino acids)=94AA_BP=1
MFIKDQAEGGKVVGSVWETESQPQGGRRRTDQLAAFERSQVSGRTPVIAVFIGGLRIMYSHKLFLQGFPFIGSHAVLSPLSLGVAAVHLP

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>11177_11177_16_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000592872_TJP3_chr19_3750135_ENST00000541714_length(amino acids)=94AA_BP=1
MFIKDQAEGGKVVGSVWETESQPQGGRRRTDQLAAFERSQVSGRTPVIAVFIGGLRIMYSHKLFLQGFPFIGSHAVLSPLSLGVAAVHLP

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>11177_11177_17_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000592872_TJP3_chr19_3750135_ENST00000587686_length(amino acids)=94AA_BP=1
MFIKDQAEGGKVVGSVWETESQPQGGRRRTDQLAAFERSQVSGRTPVIAVFIGGLRIMYSHKLFLQGFPFIGSHAVLSPLSLGVAAVHLP

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>11177_11177_18_C19orf25-TJP3_C19orf25_chr19_1478772_ENST00000592872_TJP3_chr19_3750135_ENST00000589378_length(amino acids)=94AA_BP=1
MFIKDQAEGGKVVGSVWETESQPQGGRRRTDQLAAFERSQVSGRTPVIAVFIGGLRIMYSHKLFLQGFPFIGSHAVLSPLSLGVAAVHLP

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