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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>1155_1155_1_ACACA-HTRA4_ACACA_chr17_35687113_ENST00000394406_HTRA4_chr8_38845455_ENST00000302495_length(amino acids)=155AA_BP=101
MRSFWKWISTQTVRIIRAVRAHFGGIMDEPSPLAQPLELNQHSRFIIGSVSEDNSEDEISNLVKLDLLEEKEGSLSPASVGSDTLSDLGI

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>1155_1155_2_ACACA-HTRA4_ACACA_chr17_35687113_ENST00000588142_HTRA4_chr8_38845455_ENST00000302495_length(amino acids)=129AA_BP=75
MDEPSPLAQPLELNQHSRFIIGSVSEDNSEDEISNLVKLDLLEEKEGSLSPASVGSDTLSDLGISSLQDGLALHISSGLRDHDVIVNING

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