FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>1170_1170_1_ACACA-PRPSAP2_ACACA_chr17_35766352_ENST00000353139_PRPSAP2_chr17_18793135_ENST00000268835_length(amino acids)=179AA_BP=1
MELLDFMWNCIGDHHLINGRLFNPPGGVRRQQAMSCHHKDLICTSFLQGLCCSKKAVNIINDVIHDDGNPSSNITHNRDWGLFFRNQHGD

--------------------------------------------------------------

>1170_1170_2_ACACA-PRPSAP2_ACACA_chr17_35766352_ENST00000353139_PRPSAP2_chr17_18793135_ENST00000419071_length(amino acids)=179AA_BP=1
MELLDFMWNCIGDHHLINGRLFNPPGGVRRQQAMSCHHKDLICTSFLQGLCCSKKAVNIINDVIHDDGNPSSNITHNRDWGLFFRNQHGD

--------------------------------------------------------------

>1170_1170_3_ACACA-PRPSAP2_ACACA_chr17_35766352_ENST00000353139_PRPSAP2_chr17_18793135_ENST00000536323_length(amino acids)=179AA_BP=1
MELLDFMWNCIGDHHLINGRLFNPPGGVRRQQAMSCHHKDLICTSFLQGLCCSKKAVNIINDVIHDDGNPSSNITHNRDWGLFFRNQHGD

--------------------------------------------------------------

>1170_1170_4_ACACA-PRPSAP2_ACACA_chr17_35766352_ENST00000353139_PRPSAP2_chr17_18793135_ENST00000542013_length(amino acids)=130AA_BP=1
MELLDFMWNCIGDHHHDDGNPSSNITHNRDWGLFFRNQHGDLQAGVDGSHTSDHGWGMPSIHQVRLGILRLSMNHCNSQAQALSKRLCPL

--------------------------------------------------------------