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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>12613_12613_1_CALR-QSOX1_CALR_chr19_13051468_ENST00000316448_QSOX1_chr1_180165396_ENST00000367602_length(amino acids)=374AA_BP=279
MPPPRPAMLLSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEP
FSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYT
LIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEP
PVIQNPEYKVPPARTPSSPRCSGHPVNFVLPATMNAWMCPCGTWKPPSTSSRPTSPQATSSWTSLQLGQLPGGMCRMWQPPQSWRWEPWS

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