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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>13387_13387_1_CBLB-PGK1_CBLB_chr3_105452852_ENST00000264122_PGK1_chrX_77369512_ENST00000373316_length(amino acids)=512AA_BP=462
MLRFHVSEACALGCSFFGSELFSAIPLPAGAPHTHWAACVWSGTRAHACLWTATAPKELKFQMANSMNGRNPGGRGGNPRKGRILGIIDA
IQDAVGPPKQAAADRRTVEKTWKLMDKVVRLCQNPKLQLKNSPPYILDILPDTYQHLRLILSKYDDNQKLAQLSENEYFKIYIDSLMKKS
KRAIRLFKEGKERMYEEQSQDRRNLTKLSLIFSHMLAEIKAIFPNGQFQGDNFRITKADAAEFWRKFFGDKTIVPWKVFRQCLHEVHQIS
SGLEAMALKSTIDLTCNDYISVFEFDIFTRLFQPWGSILRNWNFLAVTHPGYMAFLTYDEVKARLQKYSTKPGSYIFRLSCTRLGQWAIG
YVTGDGNILQTIPHNKPLFQALIDGSREGFYLYPDGRSYNPDLTGLCEPTPHDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPC

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>13387_13387_2_CBLB-PGK1_CBLB_chr3_105452852_ENST00000403724_PGK1_chrX_77369512_ENST00000373316_length(amino acids)=512AA_BP=462
MLRFHVSEACALGCSFFGSELFSAIPLPAGAPHTHWAACVWSGTRAHACLWTATAPKELKFQMANSMNGRNPGGRGGNPRKGRILGIIDA
IQDAVGPPKQAAADRRTVEKTWKLMDKVVRLCQNPKLQLKNSPPYILDILPDTYQHLRLILSKYDDNQKLAQLSENEYFKIYIDSLMKKS
KRAIRLFKEGKERMYEEQSQDRRNLTKLSLIFSHMLAEIKAIFPNGQFQGDNFRITKADAAEFWRKFFGDKTIVPWKVFRQCLHEVHQIS
SGLEAMALKSTIDLTCNDYISVFEFDIFTRLFQPWGSILRNWNFLAVTHPGYMAFLTYDEVKARLQKYSTKPGSYIFRLSCTRLGQWAIG
YVTGDGNILQTIPHNKPLFQALIDGSREGFYLYPDGRSYNPDLTGLCEPTPHDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPC

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>13387_13387_3_CBLB-PGK1_CBLB_chr3_105452852_ENST00000405772_PGK1_chrX_77369512_ENST00000373316_length(amino acids)=512AA_BP=462
MLRFHVSEACALGCSFFGSELFSAIPLPAGAPHTHWAACVWSGTRAHACLWTATAPKELKFQMANSMNGRNPGGRGGNPRKGRILGIIDA
IQDAVGPPKQAAADRRTVEKTWKLMDKVVRLCQNPKLQLKNSPPYILDILPDTYQHLRLILSKYDDNQKLAQLSENEYFKIYIDSLMKKS
KRAIRLFKEGKERMYEEQSQDRRNLTKLSLIFSHMLAEIKAIFPNGQFQGDNFRITKADAAEFWRKFFGDKTIVPWKVFRQCLHEVHQIS
SGLEAMALKSTIDLTCNDYISVFEFDIFTRLFQPWGSILRNWNFLAVTHPGYMAFLTYDEVKARLQKYSTKPGSYIFRLSCTRLGQWAIG
YVTGDGNILQTIPHNKPLFQALIDGSREGFYLYPDGRSYNPDLTGLCEPTPHDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPC

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