FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>135_135_1_AATF-TADA2A_AATF_chr17_35311207_ENST00000225402_TADA2A_chr17_35834661_ENST00000394395_length(amino acids)=411AA_BP=1
MWGGLRAVSGGVGESDQGERIRQGRSFGAGGWAAHLRARSGVDRELVTMAGPQPLALQLEQLLNPRPSEADPEADPEEATAARVIDRFDE
GEDGEGDFLVVGSIRKLASASLLDTDKRYCGKTTSRKAWNEDHWEQTLPGSSDEEISDEEGSGDEDSEGLGLEEYDEDDLGAAEEQECGD
HRESKKSRSHSAKTPGFSVQSISDFEKFTKGMDDLGSSEEEEDEESGMEEGDDAEDSQGESEEDRAGDRNSEDDGVVMTFSSVKVSEEVE
KGRAVKNQIALWDQLLEGRIKLQKALLTTNQLPQPDVFPLFKDKGGPEFSSALKNSRRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPG

--------------------------------------------------------------