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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>15577_15577_1_CEL-CPA1_CEL_chr9_135940149_ENST00000351304_CPA1_chr7_130024987_ENST00000011292_length(amino acids)=274AA_BP=117
MMLTMGRLQLVVLGLTCCWAVASAAKLGAVYTEGGFVEGVNKKLGLLGDSVDIFKGIPFAAPTKALENPQPHPGWQGTLKAKNFKKRCLQ
ATITQDSTYGDEDCLYLNIWVPQGRKQVSGASSNPCSETYHGKFANSEVEVKSIVDFVKDHGNIKAFISIHSYSQLLMYPYGYKTEPVPD
QDELDQLSKAAVTALASLYGTKFNYGSIIKAIYQASGSTIDWTYSQGIKYSFTFELRDTGRYGFLLPASQIIPTAKETWLALLTIMEHTL

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>15577_15577_2_CEL-CPA1_CEL_chr9_135940149_ENST00000351304_CPA1_chr7_130024987_ENST00000484324_length(amino acids)=306AA_BP=1
MFLVHSNFIWLPGWGQRGGQEGCQRVSSVGVIQGVLHDGQKRQPRLLGCGDDLGGWQQEAIAPSVPELEGEGVLDALAVGPVNSASTGLI
NCLDDAAIVELGPVERGQGCHSSLGKLIQLILVRDWFCFVAIGIHEELGVAVDGDEGLDVPMVLHKVYNGLDLHFGIGKLAVVSLRAGVT
AGSGHLLPALGHPNVEVQAVFIPVGAVLGDGGLQASLLEVLGLQGPLPARMWLRIFQGLGGSCEGDALEDVHRVTQEAELLIDAFHEPTF

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>15577_15577_3_CEL-CPA1_CEL_chr9_135940149_ENST00000372080_CPA1_chr7_130024987_ENST00000011292_length(amino acids)=274AA_BP=117
MMLTMGRLQLVVLGLTCCWAVASAAKLGAVYTEGGFVEGVNKKLGLLGDSVDIFKGIPFAAPTKALENPQPHPGWQGTLKAKNFKKRCLQ
ATITQDSTYGDEDCLYLNIWVPQGRKQVSGASSNPCSETYHGKFANSEVEVKSIVDFVKDHGNIKAFISIHSYSQLLMYPYGYKTEPVPD
QDELDQLSKAAVTALASLYGTKFNYGSIIKAIYQASGSTIDWTYSQGIKYSFTFELRDTGRYGFLLPASQIIPTAKETWLALLTIMEHTL

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>15577_15577_4_CEL-CPA1_CEL_chr9_135940149_ENST00000372080_CPA1_chr7_130024987_ENST00000484324_length(amino acids)=306AA_BP=1
MFLVHSNFIWLPGWGQRGGQEGCQRVSSVGVIQGVLHDGQKRQPRLLGCGDDLGGWQQEAIAPSVPELEGEGVLDALAVGPVNSASTGLI
NCLDDAAIVELGPVERGQGCHSSLGKLIQLILVRDWFCFVAIGIHEELGVAVDGDEGLDVPMVLHKVYNGLDLHFGIGKLAVVSLRAGVT
AGSGHLLPALGHPNVEVQAVFIPVGAVLGDGGLQASLLEVLGLQGPLPARMWLRIFQGLGGSCEGDALEDVHRVTQEAELLIDAFHEPTF

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