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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>16807_16807_1_CIDEB-PTEN_CIDEB_chr14_24775579_ENST00000258807_PTEN_chr10_89711874_ENST00000371953_length(amino acids)=398AA_BP=159
MQQAALENEARAVSQPLLRPRRKERAAPAQERTTQPRSSREGTLRSTMEYLSALNPSDLLRSVSNISSEFGRRVWTSAPPPQRPFRVCDH
KRTIRKGLTAATRQELLAKALETLLLNGVLTLVLEEDGTAVDSEDFFQLLEDDTCLMVLQSGQSWSPTRGVTIPSQRRYVYYYSYLLKNH
LDYRPVALLFHKMMFETIPMFSGGTCNPQFVVCQLKVKIYSSNSGPTRREDKFMYFEFPQPLPVCGDIKVEFFHKQNKMLKKDKMFHFWV
NTFFIPGPEETSEKVENGSLCDQEIDSICSIERADNDKEYLVLTLTKNDLDKANKDKANRYFSPNFKVKLYFTKTVEEPSNPEASSSTSV

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>16807_16807_2_CIDEB-PTEN_CIDEB_chr14_24775579_ENST00000554411_PTEN_chr10_89711874_ENST00000371953_length(amino acids)=351AA_BP=112
MEYLSALNPSDLLRSVSNISSEFGRRVWTSAPPPQRPFRVCDHKRTIRKGLTAATRQELLAKALETLLLNGVLTLVLEEDGTAVDSEDFF
QLLEDDTCLMVLQSGQSWSPTRGVTIPSQRRYVYYYSYLLKNHLDYRPVALLFHKMMFETIPMFSGGTCNPQFVVCQLKVKIYSSNSGPT
RREDKFMYFEFPQPLPVCGDIKVEFFHKQNKMLKKDKMFHFWVNTFFIPGPEETSEKVENGSLCDQEIDSICSIERADNDKEYLVLTLTK

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>16807_16807_3_CIDEB-PTEN_CIDEB_chr14_24775580_ENST00000258807_PTEN_chr10_89711875_ENST00000371953_length(amino acids)=398AA_BP=159
MQQAALENEARAVSQPLLRPRRKERAAPAQERTTQPRSSREGTLRSTMEYLSALNPSDLLRSVSNISSEFGRRVWTSAPPPQRPFRVCDH
KRTIRKGLTAATRQELLAKALETLLLNGVLTLVLEEDGTAVDSEDFFQLLEDDTCLMVLQSGQSWSPTRGVTIPSQRRYVYYYSYLLKNH
LDYRPVALLFHKMMFETIPMFSGGTCNPQFVVCQLKVKIYSSNSGPTRREDKFMYFEFPQPLPVCGDIKVEFFHKQNKMLKKDKMFHFWV
NTFFIPGPEETSEKVENGSLCDQEIDSICSIERADNDKEYLVLTLTKNDLDKANKDKANRYFSPNFKVKLYFTKTVEEPSNPEASSSTSV

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>16807_16807_4_CIDEB-PTEN_CIDEB_chr14_24775580_ENST00000554411_PTEN_chr10_89711875_ENST00000371953_length(amino acids)=351AA_BP=112
MEYLSALNPSDLLRSVSNISSEFGRRVWTSAPPPQRPFRVCDHKRTIRKGLTAATRQELLAKALETLLLNGVLTLVLEEDGTAVDSEDFF
QLLEDDTCLMVLQSGQSWSPTRGVTIPSQRRYVYYYSYLLKNHLDYRPVALLFHKMMFETIPMFSGGTCNPQFVVCQLKVKIYSSNSGPT
RREDKFMYFEFPQPLPVCGDIKVEFFHKQNKMLKKDKMFHFWVNTFFIPGPEETSEKVENGSLCDQEIDSICSIERADNDKEYLVLTLTK

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