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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>17342_17342_1_CLSTN1-CTNNBIP1_CLSTN1_chr1_9809518_ENST00000361311_CTNNBIP1_chr1_9910834_ENST00000377263_length(amino acids)=412AA_BP=31
MLPLPSARRCSEAGRAPRPERAAQRHGGGGGGSSLDPRSSPRRGAASPRPLEPRELRELRSASRAPPCRSRPGLAMLRRPAPALAPAARL
LLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLIALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKEK
LDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYDSILRVEAVDADCSPQFSQICSYEII
TPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFPNIHLETCDEP

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>17342_17342_2_CLSTN1-CTNNBIP1_CLSTN1_chr1_9809518_ENST00000377288_CTNNBIP1_chr1_9910834_ENST00000377263_length(amino acids)=422AA_BP=31
MLPLPSARRCSEAGRAPRPERAAQRHGGGGGGSSLDPRSSPRRGAASPRPLEPRELRELRSASRAPPCRSRPGLAMLRRPAPALAPAARL
LLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKST
GEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYDSILRVEAVDADCSPQ
FSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFP

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>17342_17342_3_CLSTN1-CTNNBIP1_CLSTN1_chr1_9809518_ENST00000377298_CTNNBIP1_chr1_9910834_ENST00000377263_length(amino acids)=422AA_BP=31
MLPLPSARRCSEAGRAPRPERAAQRHGGGGGGSSLDPRSSPRRGAASPRPLEPRELRELRSASRAPPCRSRPGLAMLRRPAPALAPAARL
LLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKST
GEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYDSILRVEAVDADCSPQ
FSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFP

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>17342_17342_4_CLSTN1-CTNNBIP1_CLSTN1_chr1_9809519_ENST00000361311_CTNNBIP1_chr1_9910834_ENST00000377263_length(amino acids)=412AA_BP=31
MLPLPSARRCSEAGRAPRPERAAQRHGGGGGGSSLDPRSSPRRGAASPRPLEPRELRELRSASRAPPCRSRPGLAMLRRPAPALAPAARL
LLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLIALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKEK
LDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYDSILRVEAVDADCSPQFSQICSYEII
TPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFPNIHLETCDEP

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>17342_17342_5_CLSTN1-CTNNBIP1_CLSTN1_chr1_9809519_ENST00000377288_CTNNBIP1_chr1_9910834_ENST00000377263_length(amino acids)=422AA_BP=31
MLPLPSARRCSEAGRAPRPERAAQRHGGGGGGSSLDPRSSPRRGAASPRPLEPRELRELRSASRAPPCRSRPGLAMLRRPAPALAPAARL
LLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKST
GEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYDSILRVEAVDADCSPQ
FSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFP

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>17342_17342_6_CLSTN1-CTNNBIP1_CLSTN1_chr1_9809519_ENST00000377298_CTNNBIP1_chr1_9910834_ENST00000377263_length(amino acids)=422AA_BP=31
MLPLPSARRCSEAGRAPRPERAAQRHGGGGGGSSLDPRSSPRRGAASPRPLEPRELRELRSASRAPPCRSRPGLAMLRRPAPALAPAARL
LLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKST
GEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYDSILRVEAVDADCSPQ
FSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFP

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