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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>17681_17681_1_CNN3-ALG14_CNN3_chr1_95392394_ENST00000370206_ALG14_chr1_95492816_ENST00000370205_length(amino acids)=183AA_BP=136
MAAPPLGAEAGGGGPPLVGPGGQSSKAQAEAGAACGEPRCGRRARQPGASQRSSRLCSTQLDPVAQAPPAPRGRLLRLPEEGVRASPAAA
TPRGQERGSEVRETPDPSAVSSRRPNHHDPLQQGPFLWALGRSQEQVYQILHSPNSKKPGGSAVLALHRFHHLALHVALLSPNSQGEARF

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>17681_17681_2_CNN3-ALG14_CNN3_chr1_95392394_ENST00000394202_ALG14_chr1_95492816_ENST00000370205_length(amino acids)=161AA_BP=
MILLITYVCLQRLPLMLVLYTCFTFFFLFFFFFFFSRQSRSIAQAGVQWCNLTLLAHCNLCLLASSDSCASASRVAGITGMHHHTWLIFV

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>17681_17681_3_CNN3-ALG14_CNN3_chr1_95392394_ENST00000538964_ALG14_chr1_95492816_ENST00000370205_length(amino acids)=161AA_BP=
MILLITYVCLQRLPLMLVLYTCFTFFFLFFFFFFFSRQSRSIAQAGVQWCNLTLLAHCNLCLLASSDSCASASRVAGITGMHHHTWLIFV

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