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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>19578_19578_1_CRY1-HPSE2_CRY1_chr12_107486582_ENST00000008527_HPSE2_chr10_100249953_ENST00000370546_length(amino acids)=154AA_BP=46
MVPKGAPAPRQPRPEGVHSGRRHHPLRLHPGPLVRRLLQCGHQQVADYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRIYAHC

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>19578_19578_2_CRY1-HPSE2_CRY1_chr12_107486582_ENST00000008527_HPSE2_chr10_100249953_ENST00000370549_length(amino acids)=198AA_BP=46
MVPKGAPAPRQPRPEGVHSGRRHHPLRLHPGPLVRRLLQCGHQQVADYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRIYAHC
TNHHNHNYVRGSITLFIINLHRSRKKIKLAGTLRDKLVHQYLLQPYGQEGLKSKSVQLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPV

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>19578_19578_3_CRY1-HPSE2_CRY1_chr12_107486582_ENST00000008527_HPSE2_chr10_100249953_ENST00000370552_length(amino acids)=198AA_BP=46
MVPKGAPAPRQPRPEGVHSGRRHHPLRLHPGPLVRRLLQCGHQQVADYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRIYAHC
TNHHNHNYVRGSITLFIINLHRSRKKIKLAGTLRDKLVHQYLLQPYGQEGLKSKSVQLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPV

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>19578_19578_4_CRY1-HPSE2_CRY1_chr12_107486582_ENST00000008527_HPSE2_chr10_100249953_ENST00000404542_length(amino acids)=198AA_BP=46
MVPKGAPAPRQPRPEGVHSGRRHHPLRLHPGPLVRRLLQCGHQQVADYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRIYAHC
TNHHNHNYVRGSITLFIINLHRSRKKIKLAGTLRDKLVHQYLLQPYGQEGLKSKSVQLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPV

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