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Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones. |
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >19821_19821_1_CSNK1D-POLR2E_CSNK1D_chr17_80223561_ENST00000392334_POLR2E_chr19_1090987_ENST00000215587_length(amino acids)=209AA_BP=1 MGSWFSRSLYRASSSVTSSLVMTTCSGTSSCSVMLMSSSCCRNCSRMYLGAMSTRDSSLHHLVDFALNVELRVFGFDTFKLDGNLFSCSN VRTEIDVSEGAAADLPAQPVPVPDSQLHGGGGPIRSCPPGRFLGLNSGRRRRCCRYCGSGSRLRPPHGPAFTIAFLSPRRSQRLNTGRMG -------------------------------------------------------------- >19821_19821_2_CSNK1D-POLR2E_CSNK1D_chr17_80223561_ENST00000392334_POLR2E_chr19_1090987_ENST00000586746_length(amino acids)=188AA_BP=14 MKGDLGPEDPSPSAAGRGQAGPVGAGAAAAALGLSHPPRIEALGAAGRQESDGESGAVRGAEPGAGPAVAAAAAPPPRVQTQEAAGRAGA NRAAAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVPGRHGPQVHPGAVSAAGAAHQ -------------------------------------------------------------- >19821_19821_3_CSNK1D-POLR2E_CSNK1D_chr17_80223562_ENST00000392334_POLR2E_chr19_1089550_ENST00000215587_length(amino acids)=168AA_BP=0 MYLPAVSLGRMIFTTSSLHHLVDFALNVELRVFGFDTFKLDGNLFSCSNVRTEIDVSEGAAADLPAQPVPVPDSQLHGGGGPIRSCPPGR -------------------------------------------------------------- >19821_19821_4_CSNK1D-POLR2E_CSNK1D_chr17_80223562_ENST00000392334_POLR2E_chr19_1089550_ENST00000586746_length(amino acids)=166AA_BP= MKGDLGPEDPSPSAAGRGQAGPVGAGAAAAALGLSHPPRIEALGAAGRQESDGESGAVRGAEPGAGPAVAAAAAPPPRVQTQEAAGRAGA -------------------------------------------------------------- >19821_19821_5_CSNK1D-POLR2E_CSNK1D_chr17_80223562_ENST00000392334_POLR2E_chr19_1090144_ENST00000215587_length(amino acids)=182AA_BP=1 MGSWFSRSLYRASSSVTSSLVMTTCSGTSSSLHHLVDFALNVELRVFGFDTFKLDGNLFSCSNVRTEIDVSEGAAADLPAQPVPVPDSQL HGGGGPIRSCPPGRFLGLNSGRRRRCCRYCGSGSRLRPPHGPAFTIAFLSPRRSQRLNTGRMGQSERRRRCSGPYRSRLPSPRRGWTRIF -------------------------------------------------------------- >19821_19821_6_CSNK1D-POLR2E_CSNK1D_chr17_80223562_ENST00000392334_POLR2E_chr19_1090144_ENST00000586746_length(amino acids)=161AA_BP= MKGDLGPEDPSPSAAGRGQAGPVGAGAAAAALGLSHPPRIEALGAAGRQESDGESGAVRGAEPGAGPAVAAAAAPPPRVQTQEAAGRAGA -------------------------------------------------------------- >19821_19821_7_CSNK1D-POLR2E_CSNK1D_chr17_80223562_ENST00000392334_POLR2E_chr19_1090987_ENST00000215587_length(amino acids)=209AA_BP=1 MGSWFSRSLYRASSSVTSSLVMTTCSGTSSCSVMLMSSSCCRNCSRMYLGAMSTRDSSLHHLVDFALNVELRVFGFDTFKLDGNLFSCSN VRTEIDVSEGAAADLPAQPVPVPDSQLHGGGGPIRSCPPGRFLGLNSGRRRRCCRYCGSGSRLRPPHGPAFTIAFLSPRRSQRLNTGRMG -------------------------------------------------------------- >19821_19821_8_CSNK1D-POLR2E_CSNK1D_chr17_80223562_ENST00000392334_POLR2E_chr19_1090987_ENST00000586746_length(amino acids)=188AA_BP=14 MKGDLGPEDPSPSAAGRGQAGPVGAGAAAAALGLSHPPRIEALGAAGRQESDGESGAVRGAEPGAGPAVAAAAAPPPRVQTQEAAGRAGA NRAAAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVPGRHGPQVHPGAVSAAGAAHQ -------------------------------------------------------------- |